View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12259_high_13 (Length: 239)
Name: NF12259_high_13
Description: NF12259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12259_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37133802 - 37134017
Alignment:
| Q |
1 |
ataaattcatatatctcttataaataagaatggagaaagtaataactaatattgttatttaataataactttgttgtactccattttttcttaaaaaatt |
100 |
Q |
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| T |
37133802 |
ataaatccagatatctcttataaataagactggaggaagtaataattaatattattatttaataataactttgttctactccattttttcttaaaaaaat |
37133901 |
T |
|
| Q |
101 |
aatgtatgtttttgttttcatgtaattgtactgaataaaaaatctacctgactgnnnnnnnnnnnnnnnnnngtggaagagaaccatattaaagacctaa |
200 |
Q |
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| T |
37133902 |
aatgtatgtttttgttttcatgtaattgtactgaataaaaaatctacctgactg--------ttttttttgtgtggaagagaaccatattaaagacctaa |
37133993 |
T |
|
| Q |
201 |
ctccttgaatttatgaaagaaaat |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
37133994 |
ctccttgaatttatgaaagaaaat |
37134017 |
T |
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