View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12259_low_4 (Length: 410)

Name: NF12259_low_4
Description: NF12259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12259_low_4
NF12259_low_4
[»] chr4 (49 HSPs)
chr4 (1-396)||(16277295-16277690)
chr4 (1-395)||(53386906-53387299)
chr4 (2-220)||(33849568-33849786)
chr4 (150-396)||(35660535-35660782)
chr4 (150-396)||(19434817-19435060)
chr4 (150-325)||(14549368-14549544)
chr4 (72-220)||(36038636-36038784)
chr4 (150-298)||(16296617-16296765)
chr4 (72-220)||(15534947-15535095)
chr4 (72-220)||(49547023-49547170)
chr4 (292-396)||(630162-630266)
chr4 (104-220)||(28386069-28386185)
chr4 (128-202)||(23802539-23802613)
chr4 (1-82)||(10314514-10314595)
chr4 (104-225)||(18230561-18230682)
chr4 (1-82)||(41792492-41792573)
chr4 (132-204)||(15344776-15344848)
chr4 (1-69)||(38979969-38980037)
chr4 (128-202)||(15447512-15447586)
chr4 (128-204)||(12611752-12611828)
chr4 (1-82)||(4171843-4171924)
chr4 (1-82)||(14699535-14699616)
chr4 (1-82)||(31116271-31116352)
chr4 (128-204)||(51463163-51463239)
chr4 (146-222)||(10694399-10694475)
chr4 (172-220)||(9638833-9638881)
chr4 (146-222)||(10908165-10908241)
chr4 (128-204)||(13043904-13043980)
chr4 (146-222)||(40620354-40620430)
chr4 (345-396)||(14549315-14549366)
chr4 (1-82)||(28383645-28383727)
chr4 (1-82)||(287911-287993)
chr4 (1-82)||(15279314-15279396)
chr4 (1-82)||(47126042-47126124)
chr4 (1-82)||(55501965-55502047)
chr4 (150-241)||(14477436-14477526)
chr4 (4-82)||(21188980-21189059)
chr4 (353-396)||(44023924-44023967)
chr4 (104-163)||(45005827-45005886)
chr4 (1-82)||(1101779-1101861)
chr4 (355-396)||(16026251-16026292)
chr4 (350-395)||(18247863-18247908)
chr4 (342-395)||(19697905-19697958)
chr4 (342-395)||(19708490-19708543)
chr4 (356-396)||(7640680-7640720)
chr4 (356-396)||(15117846-15117886)
chr4 (356-396)||(18239106-18239146)
chr4 (150-214)||(18462853-18462917)
chr4 (356-396)||(44772577-44772617)
[»] chr3 (51 HSPs)
chr3 (3-396)||(10554956-10555349)
chr3 (72-400)||(55291680-55292008)
chr3 (72-392)||(46722665-46722985)
chr3 (128-396)||(43929040-43929308)
chr3 (114-396)||(43549776-43550040)
chr3 (104-396)||(10833416-10833702)
chr3 (150-396)||(6805085-6805324)
chr3 (72-220)||(12305888-12306036)
chr3 (72-220)||(54521588-54521736)
chr3 (72-220)||(3803639-3803787)
chr3 (72-220)||(29544112-29544260)
chr3 (104-220)||(42353-42469)
chr3 (138-220)||(18890249-18890331)
chr3 (128-220)||(16324675-16324767)
chr3 (104-222)||(26054545-26054663)
chr3 (104-220)||(18893508-18893623)
chr3 (104-222)||(5224146-5224264)
chr3 (128-204)||(6820011-6820087)
chr3 (104-212)||(13437072-13437180)
chr3 (104-222)||(15465918-15466036)
chr3 (128-202)||(24152519-24152593)
chr3 (128-202)||(50243656-50243730)
chr3 (1-82)||(602858-602940)
chr3 (1-82)||(7633185-7633267)
chr3 (128-202)||(16643926-16644000)
chr3 (1-82)||(54974205-54974286)
chr3 (1-82)||(54976815-54976896)
chr3 (1-82)||(54979425-54979506)
chr3 (1-82)||(15009375-15009457)
chr3 (146-222)||(22652595-22652671)
chr3 (146-222)||(16979734-16979810)
chr3 (172-220)||(14641729-14641777)
chr3 (146-204)||(13522502-13522560)
chr3 (146-204)||(48631172-48631230)
chr3 (146-230)||(45803491-45803575)
chr3 (1-82)||(2037707-2037789)
chr3 (1-82)||(2041448-2041530)
chr3 (1-82)||(14038998-14039080)
chr3 (1-82)||(14042466-14042548)
chr3 (1-82)||(39231545-39231627)
chr3 (356-396)||(17670032-17670072)
chr3 (151-223)||(50350976-50351048)
chr3 (1-82)||(2034200-2034282)
chr3 (353-395)||(18739585-18739627)
chr3 (339-388)||(36528022-36528071)
chr3 (356-396)||(6159086-6159126)
chr3 (356-396)||(15413059-15413099)
chr3 (356-396)||(17208029-17208069)
chr3 (356-396)||(17463806-17463846)
chr3 (356-396)||(17693757-17693797)
chr3 (356-396)||(34159954-34159994)
[»] chr2 (45 HSPs)
chr2 (1-396)||(20590290-20590685)
chr2 (104-396)||(41301040-41301336)
chr2 (1-220)||(23338407-23338626)
chr2 (150-396)||(149664-149910)
chr2 (158-394)||(1383818-1384047)
chr2 (161-396)||(28345205-28345439)
chr2 (79-220)||(13100820-13100961)
chr2 (72-220)||(10684011-10684159)
chr2 (72-220)||(20261985-20262133)
chr2 (150-394)||(36734610-36734846)
chr2 (104-220)||(21072799-21072915)
chr2 (128-204)||(43707182-43707258)
chr2 (128-204)||(22173112-22173188)
chr2 (1-82)||(12627129-12627211)
chr2 (104-222)||(31345943-31346061)
chr2 (1-82)||(24505521-24505602)
chr2 (1-82)||(31504418-31504499)
chr2 (1-82)||(31506984-31507065)
chr2 (128-204)||(7187267-7187343)
chr2 (146-222)||(18358121-18358197)
chr2 (146-230)||(19647048-19647132)
chr2 (146-222)||(25184011-25184087)
chr2 (146-222)||(21081123-21081199)
chr2 (150-214)||(45535756-45535820)
chr2 (145-212)||(14183619-14183686)
chr2 (153-244)||(20006133-20006223)
chr2 (1-82)||(21238325-21238407)
chr2 (1-82)||(21240875-21240957)
chr2 (1-82)||(23375873-23375955)
chr2 (1-82)||(31756738-31756820)
chr2 (1-82)||(41683979-41684061)
chr2 (1-82)||(44621748-44621830)
chr2 (147-204)||(12626587-12626644)
chr2 (159-204)||(31521018-31521063)
chr2 (144-202)||(14179880-14179938)
chr2 (150-204)||(28652709-28652763)
chr2 (356-396)||(18809571-18809611)
chr2 (356-396)||(22686528-22686568)
chr2 (356-396)||(23131490-23131530)
chr2 (356-396)||(23133957-23133997)
chr2 (356-396)||(23711507-23711547)
chr2 (368-396)||(23968958-23968986)
chr2 (356-396)||(26506007-26506047)
chr2 (356-396)||(27920258-27920298)
chr2 (356-396)||(34402016-34402056)
[»] chr7 (69 HSPs)
chr7 (1-395)||(17504972-17505366)
chr7 (1-395)||(17547848-17548242)
chr7 (72-396)||(14415523-14415847)
chr7 (72-396)||(14105506-14105830)
chr7 (104-396)||(13647931-13648223)
chr7 (128-392)||(4325749-4326013)
chr7 (148-396)||(19194840-19195088)
chr7 (128-396)||(39431322-39431591)
chr7 (132-396)||(44190355-44190612)
chr7 (150-396)||(12754823-12755069)
chr7 (128-396)||(16462725-16462986)
chr7 (150-396)||(708679-708918)
chr7 (158-396)||(37539097-37539334)
chr7 (150-396)||(25942126-25942366)
chr7 (72-220)||(11304013-11304161)
chr7 (72-220)||(23664201-23664349)
chr7 (150-325)||(47975049-47975225)
chr7 (72-220)||(29797376-29797525)
chr7 (72-220)||(29801195-29801344)
chr7 (104-220)||(11661931-11662047)
chr7 (188-396)||(24270142-24270345)
chr7 (128-220)||(14188428-14188520)
chr7 (104-220)||(16107969-16108085)
chr7 (104-222)||(1856511-1856629)
chr7 (1-82)||(4994307-4994388)
chr7 (138-225)||(13256513-13256600)
chr7 (104-222)||(13917683-13917801)
chr7 (104-222)||(25926410-25926528)
chr7 (128-202)||(18455723-18455797)
chr7 (1-82)||(21064430-21064512)
chr7 (1-82)||(21742506-21742587)
chr7 (132-204)||(13864501-13864573)
chr7 (149-204)||(14274063-14274118)
chr7 (1-82)||(35367045-35367127)
chr7 (150-222)||(13315239-13315311)
chr7 (146-222)||(16550156-16550232)
chr7 (146-222)||(16615430-16615506)
chr7 (172-220)||(17070470-17070518)
chr7 (339-396)||(11309806-11309863)
chr7 (146-222)||(32160354-32160430)
chr7 (146-204)||(29052336-29052394)
chr7 (338-396)||(47975220-47975278)
chr7 (1-82)||(13394681-13394763)
chr7 (1-82)||(13732754-13732836)
chr7 (1-82)||(16007238-16007320)
chr7 (1-82)||(16929273-16929355)
chr7 (128-174)||(23557404-23557450)
chr7 (150-244)||(33060240-33060333)
chr7 (150-220)||(42565990-42566060)
chr7 (1-82)||(48786134-48786216)
chr7 (356-396)||(15720438-15720478)
chr7 (158-222)||(19282868-19282932)
chr7 (150-230)||(38295416-38295496)
chr7 (353-396)||(18985052-18985095)
chr7 (353-396)||(18999680-18999723)
chr7 (1-82)||(123409-123491)
chr7 (356-396)||(58741-58781)
chr7 (356-396)||(1856723-1856763)
chr7 (1-45)||(13848923-13848967)
chr7 (356-396)||(13869974-13870014)
chr7 (356-396)||(15376207-15376247)
chr7 (356-396)||(16460316-16460356)
chr7 (356-396)||(16550327-16550367)
chr7 (1-45)||(16574236-16574280)
chr7 (356-396)||(16580349-16580389)
chr7 (1-45)||(16591382-16591426)
chr7 (356-396)||(16615295-16615335)
chr7 (356-396)||(20384617-20384657)
chr7 (356-396)||(45847148-45847188)
[»] chr5 (44 HSPs)
chr5 (148-396)||(24738081-24738329)
chr5 (148-396)||(24750850-24751098)
chr5 (148-393)||(24668312-24668557)
chr5 (104-396)||(18419101-18419393)
chr5 (150-396)||(36508901-36509147)
chr5 (148-289)||(24594218-24594359)
chr5 (188-396)||(16604759-16604967)
chr5 (72-220)||(41875671-41875819)
chr5 (72-220)||(9776931-9777079)
chr5 (284-396)||(24617174-24617286)
chr5 (284-396)||(24746433-24746545)
chr5 (284-396)||(24713405-24713517)
chr5 (72-220)||(37804151-37804299)
chr5 (104-220)||(27868685-27868801)
chr5 (104-220)||(33472674-33472790)
chr5 (1-82)||(23669182-23669263)
chr5 (1-82)||(23694277-23694358)
chr5 (1-82)||(26496705-26496786)
chr5 (1-82)||(43121983-43122064)
chr5 (1-82)||(43125516-43125597)
chr5 (128-202)||(22412930-22413004)
chr5 (146-222)||(17011550-17011626)
chr5 (146-222)||(265860-265936)
chr5 (146-230)||(21503953-21504037)
chr5 (146-222)||(29448662-29448738)
chr5 (153-204)||(30138244-30138295)
chr5 (150-223)||(21398956-21399029)
chr5 (353-396)||(26762090-26762133)
chr5 (1-82)||(22881006-22881088)
chr5 (1-82)||(26360324-26360406)
chr5 (1-82)||(29324439-29324521)
chr5 (356-396)||(17011415-17011455)
chr5 (149-204)||(17875897-17875952)
chr5 (353-396)||(26749720-26749763)
chr5 (353-396)||(40917293-40917336)
chr5 (1-82)||(4398528-4398610)
chr5 (356-396)||(264262-264302)
chr5 (356-396)||(8833530-8833570)
chr5 (150-230)||(20313089-20313169)
chr5 (356-396)||(20909640-20909680)
chr5 (356-396)||(23065142-23065182)
chr5 (356-396)||(32607648-32607688)
chr5 (356-396)||(39245764-39245804)
chr5 (356-396)||(39364012-39364052)
[»] chr1 (37 HSPs)
chr1 (104-396)||(22130136-22130428)
chr1 (148-396)||(23194667-23194914)
chr1 (128-396)||(45574154-45574415)
chr1 (1-220)||(297181-297400)
chr1 (150-396)||(7052171-7052418)
chr1 (150-290)||(24723618-24723758)
chr1 (150-300)||(8306349-8306498)
chr1 (104-220)||(28313174-28313290)
chr1 (128-202)||(13880671-13880745)
chr1 (1-69)||(45308124-45308192)
chr1 (1-82)||(24088236-24088318)
chr1 (146-222)||(46197899-46197975)
chr1 (150-222)||(17901960-17902032)
chr1 (150-222)||(6833988-6834060)
chr1 (172-212)||(38056853-38056893)
chr1 (146-222)||(50001298-50001374)
chr1 (150-241)||(21188191-21188281)
chr1 (1-82)||(20580286-20580367)
chr1 (172-220)||(8276170-8276218)
chr1 (166-222)||(29763806-29763862)
chr1 (150-225)||(21239201-21239276)
chr1 (1-82)||(14431571-14431653)
chr1 (1-82)||(20632137-20632219)
chr1 (1-82)||(36182396-36182478)
chr1 (354-396)||(44892136-44892178)
chr1 (1-76)||(45495373-45495449)
chr1 (353-396)||(6833903-6833946)
chr1 (16-82)||(37359289-37359356)
chr1 (356-396)||(13989494-13989534)
chr1 (356-396)||(16362547-16362587)
chr1 (367-403)||(20588360-20588396)
chr1 (367-403)||(20592898-20592934)
chr1 (356-396)||(21046372-21046412)
chr1 (356-396)||(21474580-21474620)
chr1 (356-396)||(41225778-41225818)
chr1 (356-396)||(41227031-41227071)
chr1 (356-396)||(51082905-51082945)
[»] scaffold0151 (1 HSPs)
scaffold0151 (115-396)||(9744-10025)
[»] scaffold0016 (1 HSPs)
scaffold0016 (128-396)||(174243-174511)
[»] chr8 (50 HSPs)
chr8 (104-396)||(25483552-25483837)
chr8 (157-396)||(36732649-36732887)
chr8 (146-396)||(22483435-22483678)
chr8 (104-220)||(8413859-8413975)
chr8 (104-220)||(19882773-19882889)
chr8 (1-82)||(17796185-17796266)
chr8 (128-202)||(23661140-23661214)
chr8 (128-201)||(20455831-20455904)
chr8 (128-201)||(20460809-20460882)
chr8 (128-202)||(17460342-17460416)
chr8 (128-198)||(20463042-20463112)
chr8 (128-201)||(20455095-20455168)
chr8 (1-82)||(10828671-10828753)
chr8 (1-82)||(6607476-6607557)
chr8 (104-220)||(11775548-11775655)
chr8 (114-222)||(14397031-14397138)
chr8 (146-222)||(25657668-25657744)
chr8 (1-82)||(10834122-10834204)
chr8 (1-82)||(21414445-21414527)
chr8 (1-82)||(9404912-9404993)
chr8 (146-222)||(16198658-16198734)
chr8 (146-222)||(23478904-23478980)
chr8 (1-82)||(28854772-28854853)
chr8 (146-204)||(19880663-19880721)
chr8 (1-82)||(22058607-22058689)
chr8 (1-82)||(24707026-24707108)
chr8 (353-396)||(22207956-22207999)
chr8 (1-82)||(17615737-17615819)
chr8 (146-204)||(20879313-20879371)
chr8 (146-204)||(26454546-26454604)
chr8 (144-212)||(12037316-12037384)
chr8 (356-396)||(21399399-21399439)
chr8 (356-396)||(21793892-21793932)
chr8 (353-396)||(17978737-17978780)
chr8 (1-75)||(22144603-22144678)
chr8 (353-396)||(22474440-22474483)
chr8 (1-82)||(7300281-7300363)
chr8 (154-204)||(20517218-20517268)
chr8 (354-396)||(29763190-29763232)
chr8 (342-395)||(18612076-18612129)
chr8 (355-396)||(36405382-36405423)
chr8 (356-396)||(1485030-1485070)
chr8 (356-396)||(4381116-4381156)
chr8 (356-396)||(4483908-4483948)
chr8 (356-396)||(4541867-4541907)
chr8 (356-396)||(5852786-5852826)
chr8 (356-396)||(14408938-14408978)
chr8 (356-396)||(22258627-22258667)
chr8 (356-396)||(23914612-23914652)
chr8 (348-396)||(24485529-24485577)
[»] scaffold0070 (1 HSPs)
scaffold0070 (128-391)||(8751-9008)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-396)||(1774-2066)
[»] scaffold0364 (1 HSPs)
scaffold0364 (132-396)||(7822-8077)
[»] scaffold0026 (1 HSPs)
scaffold0026 (146-396)||(21770-22020)
[»] scaffold0040 (2 HSPs)
scaffold0040 (156-396)||(106325-106566)
scaffold0040 (356-396)||(13313-13353)
[»] scaffold0555 (1 HSPs)
scaffold0555 (146-396)||(8951-9194)
[»] chr6 (38 HSPs)
chr6 (188-396)||(19234774-19234981)
chr6 (158-396)||(35057193-35057430)
chr6 (72-220)||(12942955-12943103)
chr6 (72-220)||(28288586-28288733)
chr6 (104-220)||(13765172-13765288)
chr6 (104-220)||(23956688-23956804)
chr6 (138-220)||(31021866-31021948)
chr6 (158-396)||(13285397-13285634)
chr6 (1-82)||(25808085-25808166)
chr6 (104-202)||(23225968-23226066)
chr6 (104-222)||(23415728-23415846)
chr6 (1-82)||(15540099-15540180)
chr6 (128-202)||(25619032-25619106)
chr6 (128-204)||(611641-611717)
chr6 (128-204)||(20556167-20556243)
chr6 (128-191)||(14978676-14978739)
chr6 (104-222)||(27557486-27557604)
chr6 (1-82)||(15685319-15685401)
chr6 (146-222)||(15891723-15891799)
chr6 (146-222)||(15900808-15900884)
chr6 (150-222)||(29045086-29045158)
chr6 (1-82)||(12596778-12596860)
chr6 (146-222)||(15173607-15173683)
chr6 (172-220)||(19825667-19825715)
chr6 (156-202)||(5833817-5833863)
chr6 (1-82)||(8523751-8523833)
chr6 (1-82)||(16103164-16103246)
chr6 (1-82)||(22593101-22593183)
chr6 (353-396)||(19825809-19825852)
chr6 (146-204)||(18585519-18585577)
chr6 (356-396)||(2290674-2290714)
chr6 (177-241)||(14993611-14993674)
chr6 (356-396)||(18334086-18334126)
chr6 (356-396)||(23415593-23415633)
chr6 (356-396)||(24423175-24423215)
chr6 (356-396)||(25601600-25601640)
chr6 (356-396)||(27557351-27557391)
chr6 (356-396)||(33864906-33864946)
[»] scaffold0058 (2 HSPs)
scaffold0058 (104-256)||(39923-40075)
scaffold0058 (1-42)||(47505-47546)
[»] scaffold0149 (1 HSPs)
scaffold0149 (150-309)||(21275-21434)
[»] scaffold0001 (2 HSPs)
scaffold0001 (104-220)||(169265-169381)
scaffold0001 (104-220)||(176618-176734)
[»] scaffold0086 (1 HSPs)
scaffold0086 (158-360)||(35652-35845)
[»] scaffold1276 (1 HSPs)
scaffold1276 (104-225)||(960-1081)
[»] scaffold0453 (1 HSPs)
scaffold0453 (104-220)||(7121-7237)
[»] scaffold0422 (1 HSPs)
scaffold0422 (104-220)||(3789-3905)
[»] scaffold0106 (1 HSPs)
scaffold0106 (128-212)||(21817-21901)
[»] scaffold0956 (1 HSPs)
scaffold0956 (128-203)||(2230-2305)
[»] scaffold0200 (2 HSPs)
scaffold0200 (104-220)||(18419-18535)
scaffold0200 (356-396)||(18282-18322)
[»] scaffold0877 (1 HSPs)
scaffold0877 (128-202)||(2162-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (128-202)||(916-990)
[»] scaffold0125 (2 HSPs)
scaffold0125 (128-202)||(1185-1259)
scaffold0125 (150-223)||(28373-28446)
[»] scaffold0676 (1 HSPs)
scaffold0676 (150-246)||(2612-2708)
[»] scaffold0394 (1 HSPs)
scaffold0394 (128-204)||(12891-12967)
[»] scaffold0057 (2 HSPs)
scaffold0057 (128-204)||(72278-72354)
scaffold0057 (146-222)||(70007-70083)
[»] scaffold1439 (1 HSPs)
scaffold1439 (138-204)||(917-983)
[»] scaffold0112 (1 HSPs)
scaffold0112 (128-202)||(23258-23332)
[»] scaffold0061 (2 HSPs)
scaffold0061 (146-220)||(14740-14814)
scaffold0061 (146-220)||(23798-23872)
[»] scaffold0051 (1 HSPs)
scaffold0051 (104-222)||(31967-32084)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-82)||(33967-34048)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-82)||(80764-80845)
[»] scaffold0046 (1 HSPs)
scaffold0046 (146-222)||(21931-22007)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-82)||(4715-4797)
[»] scaffold0293 (1 HSPs)
scaffold0293 (104-222)||(19410-19528)
[»] scaffold0083 (3 HSPs)
scaffold0083 (128-189)||(42153-42214)
scaffold0083 (146-222)||(1759-1835)
scaffold0083 (356-396)||(1624-1664)
[»] scaffold0138 (1 HSPs)
scaffold0138 (146-222)||(20919-20995)
[»] scaffold0037 (1 HSPs)
scaffold0037 (128-204)||(82839-82915)
[»] scaffold0034 (2 HSPs)
scaffold0034 (146-222)||(29370-29446)
scaffold0034 (1-82)||(33944-34026)
[»] scaffold0462 (3 HSPs)
scaffold0462 (158-225)||(1089-1156)
scaffold0462 (158-225)||(6595-6662)
scaffold0462 (146-222)||(11045-11121)
[»] scaffold0439 (1 HSPs)
scaffold0439 (146-204)||(12081-12139)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-82)||(7759-7841)
[»] scaffold0220 (1 HSPs)
scaffold0220 (172-220)||(13772-13820)
[»] scaffold0023 (2 HSPs)
scaffold0023 (128-204)||(163175-163251)
scaffold0023 (356-396)||(95039-95079)
[»] scaffold0213 (1 HSPs)
scaffold0213 (158-225)||(18934-19001)
[»] scaffold0117 (1 HSPs)
scaffold0117 (104-203)||(42514-42613)
[»] scaffold0436 (1 HSPs)
scaffold0436 (146-222)||(8782-8858)
[»] scaffold0217 (1 HSPs)
scaffold0217 (150-222)||(28536-28608)
[»] scaffold0328 (1 HSPs)
scaffold0328 (174-230)||(18824-18882)
[»] scaffold0113 (1 HSPs)
scaffold0113 (146-217)||(35319-35390)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-82)||(106275-106357)
[»] scaffold0004 (2 HSPs)
scaffold0004 (150-222)||(66237-66308)
scaffold0004 (72-121)||(385084-385133)
[»] scaffold0525 (2 HSPs)
scaffold0525 (1-82)||(7623-7705)
scaffold0525 (1-82)||(9991-10073)
[»] scaffold0205 (1 HSPs)
scaffold0205 (150-212)||(5774-5836)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-82)||(133188-133270)
[»] scaffold0594 (1 HSPs)
scaffold0594 (150-209)||(2075-2134)
[»] scaffold0371 (1 HSPs)
scaffold0371 (353-392)||(10767-10806)
[»] scaffold0231 (1 HSPs)
scaffold0231 (353-396)||(17991-18034)
[»] scaffold0092 (1 HSPs)
scaffold0092 (150-241)||(38600-38690)
[»] scaffold0278 (1 HSPs)
scaffold0278 (104-162)||(23829-23887)
[»] scaffold0230 (1 HSPs)
scaffold0230 (146-204)||(6948-7006)
[»] scaffold0148 (1 HSPs)
scaffold0148 (150-212)||(8673-8735)
[»] scaffold0077 (1 HSPs)
scaffold0077 (361-403)||(23250-23292)
[»] scaffold0039 (1 HSPs)
scaffold0039 (353-395)||(10249-10291)
[»] scaffold0007 (1 HSPs)
scaffold0007 (154-204)||(19022-19072)
[»] scaffold0256 (1 HSPs)
scaffold0256 (156-193)||(2005-2042)
[»] scaffold0737 (1 HSPs)
scaffold0737 (356-396)||(5036-5076)
[»] scaffold0515 (1 HSPs)
scaffold0515 (356-396)||(4723-4763)
[»] scaffold0444 (1 HSPs)
scaffold0444 (356-396)||(14021-14061)
[»] scaffold0306 (1 HSPs)
scaffold0306 (356-396)||(4723-4763)
[»] scaffold0134 (1 HSPs)
scaffold0134 (356-396)||(38450-38490)
[»] scaffold0108 (1 HSPs)
scaffold0108 (356-396)||(7106-7146)


Alignment Details
Target: chr4 (Bit Score: 356; Significance: 0; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 16277295 - 16277690
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16277295 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 16277394  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16277395 gtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 16277494  T
Q  201 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16277495 tggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgcaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 16277594  T
Q  301 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  16277595 tccctgtaactatttcgctattagcttagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttccgtctgtttcaca 16277690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 53386906 - 53387299
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53386906 ggctaacttgcaatgattttagtt-atataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 53387004  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53387005 gtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 53387104  T
Q  201 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53387105 tggggtttgggtagatgaaaattggtttttctgggtgaaaattgtgcagaaatcgtaacagtaagggaaaaactcgctaggagttcgctattagcgaaac 53387204  T
Q  301 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  53387205 tccctgtaactatttcgctattcgctcagttttcgccattagcgaaattgtccagtgacaacattccctgttttatgttcttgcgtctgtttcac 53387299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 33849786 - 33849568
Alignment:
Q  2 gctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttgggag 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33849786 gctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttgggag 33849687  T
Q  102 tatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 201  Q
    ||||||||||| ||||||||  ||| |||||||| |||||||||||||||| |||||||| || ||||||||| |||||||| |||||||||||||||||    
T  33849686 tatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaataaacataggttgagtttcctatcaaattt 33849587  T
Q  202 ggggtttgggtagatgaaa 220  Q
    ||||||||||| |||||||    
T  33849586 ggggtttgggtggatgaaa 33849568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 150 - 396
Target Start/End: Complemental strand, 35660782 - 35660535
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 248  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| ||||||    
T  35660782 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttttggtgaaaaatgtgca 35660683  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 348  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||| ||| | |||| ||||||||||||||    
T  35660682 gaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattcgctaactttttgccattagcgaaat 35660583  T
Q  349 tgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||| |||||||||||| || ||||||||||||||||||||||||||||    
T  35660582 tgcacagtgacagcataccatgttttatgttcttgcgtctttttcaca 35660535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 19434817 - 19435060
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||| |||||||||| |||||||    
T  19434817 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatgaaatttgagttttttgggtgaaaaatgtgcag 19434916  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||| | |||||||||||||||| |||| |||||| ||||| | | ||||||| |||||||||||||||   | ||||| ||||||||||||    
T  19434917 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattggcgaatccctctgtaacaatttcgctattagctacctgttcgctattagcgaaatt 19435016  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    || |||||||| ||| | ||||||||||   ||||||||||||||||    
T  19435017 gcacagtgacaacatactctgttttatg---ttgcgtctttttcaca 19435060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 150 - 325
Target Start/End: Complemental strand, 14549544 - 14549368
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt-ggtttttctgggtgaaaattgtgca 248  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  14549544 aattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 14549445  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 325  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||| ||||| | | ||||||| ||||||||||||||    
T  14549444 gaaatcgtaacagtaggggaaaaactcgctagaagttctctattggcgaatccctctgtaacaatttcgctattagc 14549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 36038784 - 36038636
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||||||| | ||||||    
T  36038784 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaa 36038685  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  36038684 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 36038636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 16296765 - 16296617
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||| |||||||||| |||||||    
T  16296765 aattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagattaaattttggttttttgggtgaaaaatgtgcag 16296666  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaa 298  Q
    |||| ||||||| |||||||||||||||||| ||||||||||| |||||    
T  16296665 aaattgtaacagtaagggaaaaactcgctagaagttcgctattggcgaa 16296617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 15535095 - 15534947
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||| |||| |||||||||||||||| ||||||||| | ||||||    
T  15535095 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 15534996  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  15534995 taaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 15534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 49547023 - 49547170
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| |||||| ||| |||||||||||||  ||| ||||||||||||||||||||||||| ||||||||| | ||||||    
T  49547023 aattgggaattgggggttaggtttttggagtacgat-cttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaa 49547121  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  49547122 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 49547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 630162 - 630266
Alignment:
Q  292 tagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttt 391  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  630162 tagcgaaactccctgtaactatttcgctattagctcatttttcgctatcagcgaaattgcccagtgacagcataccctgttttatgttcttgcgtctttt 630261  T
Q  392 tcaca 396  Q
    |||||    
T  630262 tcaca 630266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 28386185 - 28386069
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28386185 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 28386086  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  28386085 ggtttgggtggatgaaa 28386069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 23802539 - 23802613
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23802539 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10314595 - 10314514
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||| ||||    
T  10314595 ggctaacttgcaatgattttagtttatataattctgattctgtttaacaaaagttatgaataaatttggagaattgggaatt 10314514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 18230682 - 18230561
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||| ||| | ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  18230682 tgatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgg 18230583  T
Q  204 ggtttgggtagatgaaatttgg 225  Q
    | |||| || ||||||| ||||    
T  18230582 gatttgtgttgatgaaaattgg 18230561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41792573 - 41792492
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||| ||||    
T  41792573 ggctaacttgcaatgattttagtttatataattctgattctgtttgacaaaagttatgaataaatttggaggattgggaatt 41792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 15344848 - 15344776
Alignment:
Q  132 catggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15344848 catgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 15344776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38979969 - 38980037
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttgg 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38979969 ggctaacttgcaatgattttagtttatataattctgattctgtttgacaaaagttatgaataaatttgg 38980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 15447512 - 15447586
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  15447512 aaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 12611828 - 12611752
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  12611828 aaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 12611752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4171924 - 4171843
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  4171924 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 4171843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14699616 - 14699535
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  14699616 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 14699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31116271 - 31116352
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  31116271 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 31116352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 51463163 - 51463239
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||    
T  51463163 aaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggtaaagttttctaacaaatttggg 51463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 10694399 - 10694475
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  10694399 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 10694475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9638881 - 9638833
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9638881 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 9638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 10908165 - 10908241
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||   ||||||| |||||||||    
T  10908165 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaatt 10908241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 13043904 - 13043980
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  13043904 aaaccatagtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 13043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 40620430 - 40620354
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  |||| |||| |||||||| |||||||| ||||||||||| ||||||| |||||||||    
T  40620430 taagaattgaagttcaggccgtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatgaaatt 40620354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 14549366 - 14549315
Alignment:
Q  345 aaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  14549366 aaattgcacagtgacaacataccctgttttatgttcttgcgtctttttcaca 14549315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28383727 - 28383645
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||||||||||| ||||    
T  28383727 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggtgaattgggaatt 28383645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 287993 - 287911
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  287993 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 287911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15279314 - 15279396
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  15279314 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 15279396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47126042 - 47126124
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  47126042 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 47126124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 55501965 - 55502047
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  55501965 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 55502047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 14477526 - 14477436
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 241  Q
    ||||||||||||| | |||||||||  ||| || | ||||||| ||||||||||  ||||||||| ||||| ||||  ||||||||||||||    
T  14477526 aattgatgttcagattgtagaataacaataagtaatgtttcctgtcaaatttggaatttgggtagttgaaa-ttggggtttctgggtgaaaa 14477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 21188980 - 21189059
Alignment:
Q  4 taacttgcaatgattttagtttatataattctgattctg-tttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||| |||||||| ||||||||||||||||||||||| ||| | ||| ||| || |||  ||||| ||||||||||||    
T  21188980 taactttcaatgattatagtttatataattctgattctgatttagcaaaggttctgcatagttttggggaattggaaatt 21189059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 44023924 - 44023967
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  44023924 cagtgacagcatctcctgtttcatgttcttgcgtctttttcaca 44023967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 45005886 - 45005827
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcagg 163  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||    
T  45005886 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcagg 45005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1101779 - 1101861
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||  ||||||| ||||    
T  1101779 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttgaagaattgggaatt 1101861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 16026251 - 16026292
Alignment:
Q  355 gtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||  ||||||| ||||||||||||||||||||||    
T  16026251 gtgacagcatgtcctgtttcatgttcttgcgtctttttcaca 16026292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 18247908 - 18247863
Alignment:
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||    
T  18247908 gcccagtgacagctttccctgtttcgcgttcttgcgtctttttcac 18247863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 19697905 - 19697958
Alignment:
Q  342 gcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    |||||| ||||||||  |||||| ||||||||  ||||||||||||||||||||    
T  19697905 gcgaaaatgcccagttccagcatcccctgtttcgtgttcttgcgtctttttcac 19697958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 19708490 - 19708543
Alignment:
Q  342 gcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    |||||| ||||||||  |||||| ||||||||  ||||||||||||||||||||    
T  19708490 gcgaaaatgcccagttccagcatcccctgtttcgtgttcttgcgtctttttcac 19708543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 7640680 - 7640720
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  7640680 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 7640720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 15117846 - 15117886
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  15117846 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 15117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 18239106 - 18239146
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  18239106 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 18239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 18462917 - 18462853
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 214  Q
    ||||||||||||| | |||||| ||  |||||| | ||||||| ||||||||||| |||||||||    
T  18462917 aattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatttgggtag 18462853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 44772577 - 44772617
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  44772577 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 44772617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 3 - 396
Target Start/End: Complemental strand, 10555349 - 10554956
Alignment:
Q  3 ctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttgggagt 102  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  10555349 ctaacttgcaattattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattggggtttaggttttgggagt 10555250  T
Q  103 atgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10555249 atgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 10555150  T
Q  203 gggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactc 302  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10555149 gggtttcggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactc 10555050  T
Q  303 cctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10555049 cctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccttgttttatgttcttgcgtctgtttcaca 10554956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 72 - 400
Target Start/End: Original strand, 55291680 - 55292008
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  55291680 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaa 55291779  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55291780 taatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 55291879  T
Q  272 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 371  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  55291880 actcgctaggagttcactattagcgaaactccctataactatttcgctattagctcacttttcgccattagcgaaattgcccagtgacaacataccctgt 55291979  T
Q  372 tttatgttcttgcgtctttttcacaggtt 400  Q
    |||||||||||||||||||||||||||||    
T  55291980 tttatgttcttgcgtctttttcacaggtt 55292008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 72 - 392
Target Start/End: Original strand, 46722665 - 46722985
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||  |||| |||||||||||||||||||||||||||||||| ||||||    
T  46722665 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaa 46722764  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  46722765 taatcataggttaagtttcctatcaaatttggggtttcggttgctgaaatttgttttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 46722864  T
Q  272 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  46722865 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcacttttcgccattagcgaacttgcccagtgacagcataccctgt 46722964  T
Q  372 tttatgttcttgcgtcttttt 392  Q
    |||||||||||| ||||||||    
T  46722965 tttatgttcttgtgtcttttt 46722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 128 - 396
Target Start/End: Complemental strand, 43929308 - 43929040
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    ||||||||  ||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43929308 aaaccatgctaattgtgttaagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggtagatggaatttggtt 43929209  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||     
T  43929208 tttttgggtgaaaaatgtgcagaaatcgtaacagcaggggaaaaactcgctaggagttcgctattggcgaaacactctgtaacaatttcgctattagcta 43929109  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |  ||||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||    
T  43929108 acatttcgccattagcgaaattgctcagtgacagcatactctgttttatgttcttgcgtatttttcaca 43929040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 114 - 396
Target Start/End: Original strand, 43549776 - 43550040
Alignment:
Q  114 attgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 213  Q
    ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43549776 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggta 43549875  T
Q  214 gatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactat 313  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43549876 gatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactat 43549975  T
Q  314 ttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||                  || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  43549976 ttcgct------------------atcagcgaaattgcccagtggcagcataccctgttttatgttcttgcgtctttttcaca 43550040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 104 - 396
Target Start/End: Original strand, 10833416 - 10833702
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||||||     
T  10833416 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttg- 10833514  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
          ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10833515 ------ggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaatggaaaaactcgctaggatttcgctattagcgaaactcc 10833608  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaa-attgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||||||||| ||||||| || ||| || | || ||||||||||||| ||||||||   ||||||||||||||||||||    
T  10833609 ctgtaactatttcgctattagctcacttttcgctatcagcaaatactgtccagtgacagcataccctgtttcgcgttcttgcgtctttttcaca 10833702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 6805085 - 6805324
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||       ||||||| |||||||| |||| || ||||||| |||||||    
T  6805085 aattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttg-------ggtagataaaatttggattttttgagtgaaaaatgtgcag 6805177  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||| | |||||||||||| ||| | ||||||||| ||||||| | ||||||| ||||||||||||||| | |||| || |||| |||||||    
T  6805178 aaatcgtaacagtaggggaaaaactcgttagaaattcgctattggcgaaaccctctgtaacaatttcgctattagctaactttttgctattaccgaaatt 6805277  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||  ||||||||||| ||  |||||||||||||||||||||||||||    
T  6805278 gcatagtgacagcatacctagttttatgttcttgcgtctttttcaca 6805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 12306036 - 12305888
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||||||||||| ||||||||| | ||||||    
T  12306036 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaa 12305937  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  12305936 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 12305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 54521736 - 54521588
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||| | ||||||    
T  54521736 aattggaaattgagggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaa 54521637  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||  ||||||| |||||||||||||||||||||||||||| |||||||    
T  54521636 taaatataggttgagtttcctatcaaatttggggtttgggtggatgaaa 54521588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 3803787 - 3803639
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||  ||| |||||||| |||||||||||||||| ||||||||| | ||||||    
T  3803787 aattgggaattgggggttaggtttttggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaa 3803688  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  3803687 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 3803639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 29544112 - 29544260
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||  ||| |||||||| |||||||||||||||| ||||||||| | ||||||    
T  29544112 aattgggaattgggggttaggtttttggggtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaa 29544211  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  29544212 taaacataggttgagtttcctatcaaatttggggtttgagtggatgaaa 29544260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 42469 - 42353
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42469 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 42370  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  42369 ggtttgggtggatgaaa 42353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 18890331 - 18890249
Alignment:
Q  138 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 18890249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 16324675 - 16324767
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  16324675 aaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggggtttgggtggatgaaa 16324767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 26054545 - 26054663
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||| ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  26054545 tgatttttgaattgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 26054644  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  26054645 gatttgggttgatgaaatt 26054663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 18893623 - 18893508
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  |||||||| || | |||||||||||||||||||||||| || || ||||||||||||||||||||| |||||||||||||    
T  18893623 tgatttttgaattgaaaagtgtaaaaac-atcgtaattgtgttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttgg 18893525  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  18893524 ggtttgggtggatgaaa 18893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 5224264 - 5224146
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  5224264 tgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 5224165  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  5224164 gatttgggttgatgaaatt 5224146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 6820087 - 6820011
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  6820087 aaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 6820011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 13437180 - 13437072
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||  | ||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  13437180 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttgg 13437081  T
Q  204 ggtttgggt 212  Q
    |||||||||    
T  13437080 ggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 15466036 - 15465918
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||| |||    
T  15466036 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgg 15465937  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  15465936 gatttgggttgatgaaatt 15465918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 24152519 - 24152593
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  24152519 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 50243730 - 50243656
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  50243730 aaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 602858 - 602940
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  602858 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttatgaataaatttggagaattgggaatt 602940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7633267 - 7633185
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  7633267 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttatgaataaatttggagaattgggaatt 7633185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 16644000 - 16643926
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  16644000 aaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 54974286 - 54974205
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  54974286 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 54974205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 54976896 - 54976815
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  54976896 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 54976815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 54979506 - 54979425
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  54979506 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 54979425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15009375 - 15009457
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaag-ttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  | |||| |||||||||||||||| ||||||| ||||    
T  15009375 ggctaacttgcaatgattttagtttatataattatgattctgttttaacaaagcttatgaataaatttggagaattgggaatt 15009457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 22652671 - 22652595
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  22652671 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 16979810 - 16979734
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||  ||||||| |||||||||    
T  16979810 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatgaaatt 16979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 14641729 - 14641777
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14641729 taatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 14641777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 13522502 - 13522560
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  13522502 taagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 48631230 - 48631172
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  48631230 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 45803491 - 45803575
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 230  Q
    ||||||||||||| ||||| ||||||||| |||||||| ||||||||||  |||||||| || |||| | ||||| |||| ||||    
T  45803491 taagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttgggattagggtggttgaaaattgggtttt 45803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2037707 - 2037789
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  2037707 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 2037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2041448 - 2041530
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  2041448 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 2041530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14039080 - 14038998
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  14039080 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 14038998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14042548 - 14042466
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  14042548 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 14042466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39231627 - 39231545
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  39231627 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 39231545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 17670032 - 17670072
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  17670032 tgacagcatgccctgtttcatgttcttgcgtctttttcaca 17670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 50350976 - 50351048
Alignment:
Q  151 attgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 223  Q
    |||||||||||||| ||| ||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  50350976 attgatgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 50351048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2034200 - 2034282
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||| | ||||||| ||||    
T  2034200 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaattttgagaattgggaatt 2034282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 18739627 - 18739585
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    |||||||||||||||||||||   |||||||||||||||||||    
T  18739627 cagtgacagcattccctgtttcgcgttcttgcgtctttttcac 18739585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 36528071 - 36528022
Alignment:
Q  339 ttagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtct 388  Q
    ||||||||||||| | |||||| ||||| |||||| ||||||||||||||    
T  36528071 ttagcgaaattgcacggtgacaacattctctgtttcatgttcttgcgtct 36528022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 6159126 - 6159086
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||| ||| |||||||| ||||||||||||||||||||||    
T  6159126 tgacaacatgccctgtttcatgttcttgcgtctttttcaca 6159086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 15413099 - 15413059
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  15413099 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 15413059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 17208069 - 17208029
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| |||||||||| |||||||||||    
T  17208069 tgacagcatgccctgtttcatgttcttgcatctttttcaca 17208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 17463846 - 17463806
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  17463846 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 17463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 17693797 - 17693757
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  17693797 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 17693757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 34159994 - 34159954
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  34159994 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 34159954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 348; Significance: 0; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 20590290 - 20590685
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  20590290 ggctaacttgcaatgattttagtttatataattctgcatctgtttggcaaaagttatgaataaatttggtgaatagggaattgggggttaggttttggga 20590389  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20590390 gtatgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatt 20590489  T
Q  201 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20590490 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 20590589  T
Q  301 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  20590590 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgaccagtgacagcattccctgttttatgttcttgcgtctgtttcaca 20590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 104 - 396
Target Start/End: Original strand, 41301040 - 41301336
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41301040 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 41301139  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  41301140 gatttgggtagatgaaatttggattttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 41301239  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcga----aattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||||||||| ||||||| || |||||    |||||| |||||||||||| || ||||||||||| ||||||| ||||||||    
T  41301240 ctgtaactatttcgctattagctcacttttcgctatcagcgaaattaattgctcagtgacagcataccttgttttatgtttttgcgtcattttcaca 41301336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23338407 - 23338626
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23338407 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 23338506  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  23338507 gtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatt 23338606  T
Q  201 tggggtttgggtagatgaaa 220  Q
    |||||||||||| |||||||    
T  23338607 tggggtttgggtggatgaaa 23338626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 149664 - 149910
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||| |    
T  149664 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcgg 149763  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||| | ||||| | ||||||||||||||| | ||||||||||||||||||||    
T  149764 aaatcgtaacagcaggggagaaactcgctagaagttcgctattagcgaaaccctctgtagcaatttcgctattagctaacttttcgccattagcgaaatt 149863  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    || |||||||||||| |||||||||||||||||||||||||||||||    
T  149864 gcacagtgacagcataccctgttttatgttcttgcgtctttttcaca 149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 158 - 394
Target Start/End: Original strand, 1383818 - 1384047
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgta 257  Q
    ||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||  |||| |||||||||| |||||||||||||||    
T  1383818 ttcaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgtgttttttgggtgaaaaatgtgcagaaatcgta 1383910  T
Q  258 acagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtg 357  Q
    |||||| | || ||||||||||| ||||||||||| ||||||  | ||||||| ||||||| ||||||| | ||||||||||||||||||||||  ||||    
T  1383911 acagcaggagagaaactcgctagaagttcgctattggcgaaatcctctgtaacgatttcgcgattagctaacttttcgccattagcgaaattgcaaagtg 1384010  T
Q  358 acagcattccctgttttatgttcttgcgtctttttca 394  Q
    ||||||| |||||||| ||||| ||||||||||||||    
T  1384011 acagcataccctgtttcatgtttttgcgtctttttca 1384047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 161 - 396
Target Start/End: Original strand, 28345205 - 28345439
Alignment:
Q  161 aggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgtaac 259  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||| |||| |||| ||||||||||||    
T  28345205 aggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagataaaatttgggtttt-tgggtgaaaaagtgtgtagaaatcgtaac 28345303  T
Q  260 agcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccagtga 358  Q
    |||| ||| |||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| |||| |||  ||||||||||||||||||||| ||||||    
T  28345304 agcatggg-aaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctaatagc-cagagtttcgccattagcgaaattgcacagtga 28345401  T
Q  359 cagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||| ||||| || |||||||||  |||||||||||    
T  28345402 cagcataccctgattcatgttcttgtatctttttcaca 28345439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 13100820 - 13100961
Alignment:
Q  79 aattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcat 178  Q
    |||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||   |||||||||||||    
T  13100820 aattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcat 13100919  T
Q  179 aggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  13100920 aggttaagtttcctatcaaatttggggtttgggtggatgaaa 13100961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 10684011 - 10684159
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||| |||| |||||||||||||||| ||||||||| | ||||||    
T  10684011 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 10684110  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  10684111 taaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 10684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 20262133 - 20261985
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||| |||| |||||||||||||||| ||||||||| | ||||||    
T  20262133 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 20262034  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  20262033 taaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 20261985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 150 - 394
Target Start/End: Original strand, 36734610 - 36734846
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgca 248  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| |||| | ||||||||  |||| |    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttt-taggtgaaaaagtgtgta 36734701  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 348  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||  | ||||||| ||||| | | |||||   |||||||||||||||||||    
T  36734702 gaaattgtaacagcaggggaaaa-ctcgctagaagttcgctattggcgaaatcctctgtaacaatttcaccaatagctagattttcgccattagcgaaat 36734800  T
Q  349 tgcccagtgacagcattccctgttttatgttcttgcgtctttttca 394  Q
    ||| | |||||| ||| | |||||||||||||||||||||||||||    
T  36734801 tgcactgtgacaacatactctgttttatgttcttgcgtctttttca 36734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 21072799 - 21072915
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  21072799 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttgg 21072898  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  21072899 ggtttgggtggatgaaa 21072915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 43707182 - 43707258
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43707182 aaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 22173112 - 22173188
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  22173112 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttatgttttctaacaaatttggg 22173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12627129 - 12627211
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  12627129 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttatgaataaatttggagaattgggaatt 12627211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 31346061 - 31345943
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||   |||||||| |||||||| |||||||||||||||||||    
T  31346061 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttgg 31345962  T
Q  204 ggtttgggtagatgaaatt 222  Q
      ||||||| |||||||||    
T  31345961 tatttgggttgatgaaatt 31345943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24505602 - 24505521
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  24505602 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 24505521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31504499 - 31504418
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  31504499 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 31504418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31507065 - 31506984
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  31507065 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 31506984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 7187343 - 7187267
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||  ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||    
T  7187343 aaaccatgataattgtgttaagaattgatgttctggttgtagaataatcatagattaagtttcctaacaaatttggg 7187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 18358121 - 18358197
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  18358121 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 18358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 19647132 - 19647048
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 230  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||||||||||||||| ||| ||||| ||||||| |||||||    
T  19647132 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgggatttaggtagttgaaattgggttttt 19647048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 25184087 - 25184011
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| ||||||   ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25184087 taagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25184011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 21081123 - 21081199
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  21081123 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaatt 21081199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 45535820 - 45535756
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 214  Q
    ||||||||||||||| |||||||||  |||||| | ||||||| ||||||||||| |||||||||    
T  45535820 aattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtag 45535756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 14183619 - 14183686
Alignment:
Q  145 ttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    |||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||  |||||||    
T  14183619 ttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggt 14183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 20006133 - 20006223
Alignment:
Q  153 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 244  Q
    ||||||||| || |||||||||  |||||| | ||||||||||||||||||| ||||||||| || |||| || |||| || ||||||||||    
T  20006133 tgatgttcatgttgtagaataacaataggtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgagtgaaaattg 20006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21238325 - 21238407
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  21238325 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 21238407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21240875 - 21240957
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  21240875 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 21240957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23375955 - 23375873
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctg-tttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| |||||| | ||||||||||||||||||||||| ||| | ||| |||||| |||  ||||| ||||||||||||    
T  23375955 ggctaactttcaatgaatatagtttatataattctgattctgttttagcaaaggttatggatagttttggagaattggaaatt 23375873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31756820 - 31756738
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  31756820 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 31756738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41683979 - 41684061
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  41683979 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 41684061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44621830 - 44621748
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  44621830 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 44621748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 12626587 - 12626644
Alignment:
Q  147 aagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||||||||||| ||||||||| |||| ||| ||||||||||  ||||||||    
T  12626587 aagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggg 12626644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 31521063 - 31521018
Alignment:
Q  159 tcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||    
T  31521063 tcaggttgtagaataatcataggttaagtttcctaactaatttggg 31521018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 14179880 - 14179938
Alignment:
Q  144 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||| ||||| ||||||||| || ||||||||||||||   |||||||||||||||||    
T  14179880 gttaataattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttg 14179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 28652709 - 28652763
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||| ||||||||||||||||   ||||| |||| |||||||||    
T  28652709 aattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 18809611 - 18809571
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  18809611 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 18809571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 22686568 - 22686528
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||| ||||||||||||||||    
T  22686568 tgacagcatgccctgtttcatgtttttgcgtctttttcaca 22686528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 23131530 - 23131490
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  23131530 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 23131490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 23133997 - 23133957
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  23133997 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 23133957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 23711507 - 23711547
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  23711507 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 23711547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 23968958 - 23968986
Alignment:
Q  368 ctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||||||    
T  23968958 ctgttttatgttcttgcgtctttttcaca 23968986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 26506047 - 26506007
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  26506047 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 26506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 27920258 - 27920298
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  27920258 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 27920298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 34402016 - 34402056
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  34402016 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 34402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 17504972 - 17505366
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17504972 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 17505071  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505072 gtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 17505171  T
Q  201 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17505172 tggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaaactcgctaggagttcgctattagcaaaac 17505271  T
Q  301 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17505272 tccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctgtttcac 17505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 17548242 - 17547848
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17548242 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 17548143  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17548142 gtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 17548043  T
Q  201 tggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17548042 tggagtttgggtagatgaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaaactcgctaggagttcgctattagcaaaac 17547943  T
Q  301 tccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17547942 tccctgtaactatttcgctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctgtttcac 17547848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 72 - 396
Target Start/End: Original strand, 14415523 - 14415847
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  14415523 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaa 14415622  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14415623 taatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 14415722  T
Q  272 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||    
T  14415723 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcacttttcgccattagcgaacttgcctagtgacagcataccctgt 14415822  T
Q  372 tttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||    
T  14415823 tttatgttcttgcgtctttttcaca 14415847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 72 - 396
Target Start/End: Original strand, 14105506 - 14105830
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  14105506 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaa 14105605  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14105606 taatcataggttaagtttcctatcaaatttggggtttgggttgatgaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaa 14105705  T
Q  272 actcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgt 371  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  14105706 actcgttaggagttcgctattagcgaaactccctgtaactatttcgctattagctcacttttcgccattagcgaaattgcccagtgacagcattccctat 14105805  T
Q  372 tttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||  |||||||    
T  14105806 tttatgttcttgcgtcagtttcaca 14105830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 104 - 396
Target Start/End: Complemental strand, 13648223 - 13647931
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| |||||||   |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  13648223 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgg 13648124  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13648123 gatttaggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaacttgctaggatttcgctattagcgaaactcc 13648024  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  13648023 ctgtaactatttcgctattagctcacttttcgctactagcgaaattgcctagtgacagcataccctgttttatgttcttgtgtctttttcaca 13647931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 128 - 392
Target Start/End: Complemental strand, 4326013 - 4325749
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  4326013 aaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaatttgggt 4325914  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||| ||||| |||||||||     
T  4325913 tttttaggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggaattcgctattggcgaaacactctgtaacaatttcactattagcta 4325814  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtcttttt 392  Q
    |  ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  4325813 acctttcgccattagcgaaattgctcagtgacagcatatcctgttttatgttcttgcatcttttt 4325749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 148 - 396
Target Start/End: Complemental strand, 19195088 - 19194840
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||    
T  19195088 agaattgttattcagattgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgc 19194989  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 347  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||| ||||| | ||||||||||||||||||    
T  19194988 agaaatcgtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctactagctaacttttcgccattagcgaaa 19194889  T
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  19194888 ttgcacagtgatagcataccctgttttatgttcttgcgtctttttcaca 19194840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 128 - 396
Target Start/End: Original strand, 39431322 - 39431591
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| |||||||| ||||||||||| |    
T  39431322 aaaccatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggatttgggtaaatgaaatttggat 39431421  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| | || |||| |||||||||||||||     
T  39431422 tttttggatgaaaaatgtgcagaaatcgtaacaacaagggaaaaactcgctagaagttcgctattggcgaaaccctctctaacaatttcgctattagcta 39431521  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcat-tccctgttttatgttcttgcgtctttttcaca 396  Q
    | |||| ||| ||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||    
T  39431522 actttttgccgttagcgaaattgcacagtgacaacatacccctgttttatgttcttgcgtctttttcaca 39431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 132 - 396
Target Start/End: Original strand, 44190355 - 44190612
Alignment:
Q  132 catggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttc 231  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||     
T  44190355 catgacaattgagttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagatgaaattcagtttttt 44190454  T
Q  232 tgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagtt 331  Q
    ||| ||       |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||| |||||||||| | ||    
T  44190455 tggatg-------tgcagaaatcataacagcaagggaaaaactcgctaggagttcgctattggcgaaacctcctgtaacaattttgctattagctaactt 44190547  T
Q  332 ttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||| ||||| |||||| |||| ||||||||| ||||||||||||||||    
T  44190548 ttcgccattagcgaaattgctcagtggcagcataccctattttatgttattgcgtctttttcaca 44190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 12754823 - 12755069
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || || |||| |||||||    
T  12754823 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgagtaaaaaatgtgcag 12754922  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||| |||| | ||||||| ||| ||||||||||| |  |||||| ||||||||||||    
T  12754923 aaatcgtaacagtaggggaaaaactcgctagaagtttgctattagctaaaccctctgtaacaattgcgctattagctaacgtttcgctattagcgaaatt 12755022  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    || |||||||||||| |||| ||| ||||||||||||||||||||||    
T  12755023 gcacagtgacagcataccctatttcatgttcttgcgtctttttcaca 12755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 128 - 396
Target Start/End: Complemental strand, 16462986 - 16462725
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||    
T  16462986 aaacgatggcaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg-------tagatgaaatttggtt 16462894  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| |||||||||| |||||||||||||||| || |  ||||||||| | ||| ||||||||||| ||||| | |  |||||| |||||||||||||||     
T  16462893 tttttgggtgaaaaatgtgcagaaatcgtaaaagtagtggaaaaacttgatagaagttcgctattggcgaatccctttgtaacaatttcgctattagcta 16462794  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    | ||||||| ||||||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||||    
T  16462793 acttttcgctattagcgaagttgcacagtgacagcatgccctattttatgttcttgtgtctttttcaca 16462725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 708679 - 708918
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||| | |||||||| |||||||    
T  708679 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttgggtttttttggtgaaaaatgtgcag 708771  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||||  |||||||||||||||| ||||  ||||| | ||||| | ||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  708772 aaatcgtaacagcgggggaaaaactcgctagaagttttctattggtgaaaccctctgtaacaatttcgctattagctaacttttcgctattagcgaaatt 708871  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    || |||||||||||| |||||||||||||||||||||||||||||||    
T  708872 gcacagtgacagcataccctgttttatgttcttgcgtctttttcaca 708918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 158 - 396
Target Start/End: Complemental strand, 37539334 - 37539097
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgcagaaatcgt 256  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||  |||| |||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtgtagaaatcgt 37539236  T
Q  257 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagt 356  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||  | || |||| ||||||||| |||||   |||||||||||||||||||||| ||||    
T  37539235 aacagcatgggaaaa-ctcgctagaagttcgctattggcgaaatcctctataacaatttcgctaatagctagattttcgccattagcgaaattgcacagt 37539137  T
Q  357 gacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||| | |||||| ||||||||| ||||||||||||    
T  37539136 gacagcatactctgtttcatgttcttgggtctttttcaca 37539097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 150 - 396
Target Start/End: Complemental strand, 25942366 - 25942126
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 248  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||| |||| |    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg-------tagatgaaatttgggtttttttgggtgaaaaatgtgta 25942274  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 348  Q
    ||||||||||||||| | |||||||||||||| ||||||||||| | ||||  | ||||||| |||||| ||||||||   |||||| ||||||||||||    
T  25942273 gaaatcgtaacagcaggagaaaaactcgctagaagttcgctattggtgaaatcctctgtaacaatttcgatattagctagattttcgacattagcgaaat 25942174  T
Q  349 tgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||| |||||||||||| | |||||| ||||| ||| ||||||||||||    
T  25942173 tgcacagtgacagcatactctgtttcatgtttttgtgtctttttcaca 25942126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 11304161 - 11304013
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||| | ||||||    
T  11304161 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaa 11304062  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| ||||||||||||||||||| |||||||| |||||||    
T  11304061 taaacataggttgagtttcctatcaaatttggtgtttgggtggatgaaa 11304013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 23664201 - 23664349
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||||||||||| ||||||||| | ||||||    
T  23664201 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaa 23664300  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  23664301 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 150 - 325
Target Start/End: Original strand, 47975049 - 47975225
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 248  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||| ||||| | |||||||| ||||||    
T  47975049 aattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatgaaatttgggtttttttcggtgaaaaatgtgca 47975148  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagc 325  Q
     |||||||||||| | |||||||||||||||| ||||||||||| ||||||| | ||||||| ||||||||||||||    
T  47975149 aaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaaaccctctgtaacaatttcgctattagc 47975225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 29797525 - 29797376
Alignment:
Q  72 aattggaaattgggggttaggttttg-ggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtaga 170  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||  ||| ||| |||| ||||||||||| |||| ||||||||| | |||||    
T  29797525 aattgggaattgggggttaggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtaga 29797426  T
Q  171 ataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  29797425 ataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 29797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 29801344 - 29801195
Alignment:
Q  72 aattggaaattgggggttaggttttg-ggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtaga 170  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||  ||| ||| |||| ||||||||||| |||| ||||||||| | |||||    
T  29801344 aattgggaattgggggttaggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtaga 29801245  T
Q  171 ataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  29801244 ataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 29801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 11662047 - 11661931
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||||||||||| | ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  11662047 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttgg 11661948  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  11661947 ggtttgggtggatgaaa 11661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 188 - 396
Target Start/End: Original strand, 24270142 - 24270345
Alignment:
Q  188 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 287  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| | |||||||| |||| |||||||||||      |||||||||||||||| ||||||    
T  24270142 ttcctatcaaatttgggatttgagtagatgaaatttgagtttttttggtgaaaaatgtgtagaaatcgtaag-----gggaaaaactcgctagaagttcg 24270236  T
Q  288 ctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgt 386  Q
    ||||| ||||||  | ||||||| |||||| || |||| ||| |||| ||| ||||| ||||||| |||||||| ||| || ||||| ||||||||||||    
T  24270237 ctattggcgaaatcctctgtaacaatttcggtaatagc-cagatttttgccgttagcaaaattgcacagtgacaacataccttgtttcatgttcttgcgt 24270335  T
Q  387 ctttttcaca 396  Q
    ||||||||||    
T  24270336 ctttttcaca 24270345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 14188428 - 14188520
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14188428 aaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 14188520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 16107969 - 16108085
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  16107969 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 16108068  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  16108069 ggtttgggtggatgaaa 16108085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 1856511 - 1856629
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  1856511 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 1856610  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  1856611 gatttgggttgatgaaatt 1856629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4994388 - 4994307
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||| ||||    
T  4994388 ggctaacttgcaatgattttagtttatataattctgattctgtttgacaaaagttatgaataaatttggaggattgggaatt 4994307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 13256600 - 13256513
Alignment:
Q  138 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 225  Q
    |||||||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||    
T  13256600 aattgtgttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggatttgggttgatgaaaattgg 13256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 13917683 - 13917801
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  13917683 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 13917782  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | | ||||| |||||||||    
T  13917783 gatctgggttgatgaaatt 13917801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 25926410 - 25926528
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||| ||||||||    
T  25926410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgg 25926509  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  25926510 gatttgggttgatgaaatt 25926528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 18455723 - 18455797
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||    
T  18455723 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctaacaaatttg 18455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21064430 - 21064512
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||| ||||||||||||| ||||||||||||    
T  21064430 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttgtgaataaatttggagaattggaaatt 21064512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21742506 - 21742587
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  21742506 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 21742587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 13864501 - 13864573
Alignment:
Q  132 catggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  13864501 catgacaattgtgttaagaattgatgttcagattgtataataatcataggttaagtttcctaacaaatttggg 13864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 14274118 - 14274063
Alignment:
Q  149 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14274118 gaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 14274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35367127 - 35367045
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||  | ||| ||||||||||||||||| ||||||||||||    
T  35367127 ggctaacttgcaatgattttagtttatgtaattatgattctattttaataaaggttatgaataaatttggagaattggaaatt 35367045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 13315239 - 13315311
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  13315239 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 13315311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 16550156 - 16550232
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16550156 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 16615506 - 16615430
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  16615506 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaatt 16615430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 17070470 - 17070518
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17070470 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 17070518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 11309863 - 11309806
Alignment:
Q  339 ttagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||    
T  11309863 ttagcgaaattgcacagtgacagcattctctgtttcatgttcttgcgtctatttcaca 11309806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 32160354 - 32160430
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | ||||| | |||||||||    
T  32160354 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatgaaatt 32160430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 29052336 - 29052394
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  29052336 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 47975220 - 47975278
Alignment:
Q  338 attagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||| |||||||| ||| || ||||||||||||||| ||||||||||||    
T  47975220 attagcgaaattgcacagtgacaacataccttgttttatgttcttgtgtctttttcaca 47975278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13394681 - 13394763
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  13394681 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 13394763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13732754 - 13732836
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  13732754 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 13732836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16007320 - 16007238
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  16007320 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 16007238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16929273 - 16929355
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  16929273 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 16929355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 23557450 - 23557404
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataa 174  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||    
T  23557450 aaaccatgacaattgtgttatgaattgatgttcaggttgtagaataa 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 33060333 - 33060240
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattg 244  Q
    ||||||||||||||| |||||||||  |||||| | ||||| |||| |||||||| ||||||||| || |||| || |||| ||| |||||||||    
T  33060333 aattgatgttcaggtcgtagaataacaataggtaatgtttcatatcgaatttgggatttgggtagttgtaattggggtttt-tggatgaaaattg 33060240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 42565990 - 42566060
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||| |||||||||  |||||| | |||||||||||||||||   ||||||||| |||||    
T  42565990 aattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttgaaatttgggtagttgaaa 42566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48786216 - 48786134
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  48786216 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 48786134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 15720478 - 15720438
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  15720478 tgacagcatgccctgtttcatgttcttgcgtctttttcaca 15720438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 19282932 - 19282868
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||||  ||||| | |||||||||    
T  19282932 ttcaggttgtagaataatcataggtagagttttctatcaaatttggaatttggattgatgaaatt 19282868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 38295496 - 38295416
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 230  Q
    ||||| ||||||||  |||||||||||||||||  ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  38295496 aattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 38295416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 18985052 - 18985095
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||| | ||||||||| |||||||||||||||||||||    
T  18985052 cagtgacagcttcccctgttttgtgttcttgcgtctttttcaca 18985095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 18999680 - 18999723
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||| | ||||||||| |||||||||||||||||||||    
T  18999680 cagtgacagcttcccctgttttgtgttcttgcgtctttttcaca 18999723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 123409 - 123491
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||| ||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  123409 ggctaacttacattaattttagtatatatgattatgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 123491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 58741 - 58781
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  58741 tgacagcatgccatgtttcatgttcttgcgtctttttcaca 58781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 1856723 - 1856763
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  1856723 tgacagcattccctgtttcgcgttcttgcgtctttttcaca 1856763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13848923 - 13848967
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgttt 45  Q
    ||||||||  ||||| || ||||||||||||||||||||||||||    
T  13848923 ggctaactctcaatggttatagtttatataattctgattctgttt 13848967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 13870014 - 13869974
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  13870014 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 13869974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 15376207 - 15376247
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  15376207 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 15376247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 16460316 - 16460356
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  16460316 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 16460356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 16550327 - 16550367
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  16550327 tgacagcatcccctgtttcacgttcttgcgtctttttcaca 16550367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16574280 - 16574236
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgttt 45  Q
    ||||||||  ||||| || ||||||||||||||||||||||||||    
T  16574280 ggctaactctcaatggttatagtttatataattctgattctgttt 16574236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 16580389 - 16580349
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  16580389 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 16580349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16591382 - 16591426
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgttt 45  Q
    ||||||||  ||||| || ||||||||||||||||||||||||||    
T  16591382 ggctaactctcaatggttatagtttatataattctgattctgttt 16591426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 16615335 - 16615295
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  16615335 tgacagcatcccctgtttcacgttcttgcgtctttttcaca 16615295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 20384617 - 20384657
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  20384617 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 20384657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 45847148 - 45847188
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  45847148 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 45847188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 148 - 396
Target Start/End: Original strand, 24738081 - 24738329
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24738180  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 347  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24738181 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24738280  T
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24738281 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 24738329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 148 - 396
Target Start/End: Original strand, 24750850 - 24751098
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24750949  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 347  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24750950 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24751049  T
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24751050 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 24751098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 148 - 393
Target Start/End: Original strand, 24668312 - 24668557
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgc 24668411  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 347  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  24668412 ataaatcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaat 24668511  T
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttc 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24668512 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttc 24668557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 104 - 396
Target Start/End: Complemental strand, 18419393 - 18419101
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||     
T  18419393 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttga 18419294  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18419293 gatttgggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 18419194  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||||||||||| || ||||||| || | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18419193 ctgtaactatttcgctattagcccacttttcgctatcaacgaaattgcccagtgacagcataccctgttttatgttcttgcatctttttcaca 18419101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 36508901 - 36509147
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||| |||| ||    
T  36508901 aattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatcaaatttgggttttttgggtgaaaaatgtgtag 36509000  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaatt 349  Q
    |||||||||||| | ||||| |||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | ||||||| |||||| |||||    
T  36509001 aaatcgtaacagtaggggaagaactcgctagaagttcgctattggcgaatccctctgtaacaatttcgctattagctaacttttcgctattagcaaaatt 36509100  T
Q  350 gcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||| ||||||| ||| |||||||| ||||||||||||||||||||||    
T  36509101 gcctagtgacaacataccctgtttcatgttcttgcgtctttttcaca 36509147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 24594218 - 24594359
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttttgggtgaaaattgtgc 24594317  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 289  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24594318 agaaatcgtaacagcaagggaaaaactcgctaggagttcgct 24594359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 188 - 396
Target Start/End: Original strand, 16604759 - 16604967
Alignment:
Q  188 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 287  Q
    ||||||||||||||| | |||| ||||||||||||||| |||| |||||||||| |||| ||||||||||| |||| |||||||||||| ||| ||||||    
T  16604759 ttcctatcaaatttgagatttgagtagatgaaatttggattttttgggtgaaaaatgtgaagaaatcgtaatagcaggggaaaaactcgatagaagttcg 16604858  T
Q  288 ctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtc 387  Q
    ||||| ||||||  | ||||||| || |||||||||||    |||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  16604859 ctattggcgaaatcctctgtaacaatctcgctattagcaagattttcgccattagcgaaattgcacagtggcagcataccctgtttcatgttcttgcgtc 16604958  T
Q  388 tttttcaca 396  Q
    |||||||||    
T  16604959 tttttcaca 16604967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 41875671 - 41875819
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||   ||||||    
T  41875671 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaa 41875770  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41875771 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 41875819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 9777079 - 9776931
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||| |||| ||||| |||||||||| ||||||||| | ||||||    
T  9777079 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaa 9776980  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  9776979 taaacataggttaagtttcctatcaaatttggggtttgggtggatgaaa 9776931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 24617174 - 24617286
Alignment:
Q  284 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttg 383  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24617174 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttcttg 24617273  T
Q  384 cgtctttttcaca 396  Q
    |||||||||||||    
T  24617274 cgtctttttcaca 24617286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 24746433 - 24746545
Alignment:
Q  284 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttg 383  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24746433 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttcttg 24746532  T
Q  384 cgtctttttcaca 396  Q
    |||||||||||||    
T  24746533 cgtctttttcaca 24746545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 24713405 - 24713517
Alignment:
Q  284 ttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttg 383  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24713405 ttcgcttttagcgaaactccctgtaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacaacattccttgttttatgttcttg 24713504  T
Q  384 cgtctttttcaca 396  Q
    |||||||||||||    
T  24713505 cgtctttttcaca 24713517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 37804151 - 37804299
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| ||| |||| |||||||||||||||| ||||||||| | ||||||    
T  37804151 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 37804250  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||| ||| |||||||||||||||||||||||||||| |||||||    
T  37804251 taaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaa 37804299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 27868685 - 27868801
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27868685 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 27868784  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  27868785 ggtttgggtggatgaaa 27868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 33472674 - 33472790
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33472674 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 33472773  T
Q  204 ggtttgggtagatgaaa 220  Q
    | ||||||| |||||||    
T  33472774 gatttgggtggatgaaa 33472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23669263 - 23669182
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23669263 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaatt 23669182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23694358 - 23694277
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23694358 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaatt 23694277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26496786 - 26496705
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  26496786 ggctaacttgcaatgattttagtttatataattctgattctgtttggtaaaagttatgaataaatttggtgaattgggaatt 26496705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43122064 - 43121983
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  43122064 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 43121983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43125597 - 43125516
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  43125597 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 43125516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 22413004 - 22412930
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| |||||||||||||||||||||| | || |||||||||||||||||||||||| ||| ||||||||    
T  22413004 aaaccatggtaattgtgttaagaattgatgtttatgttgtagaataatcataggttaagttttctaacaaatttg 22412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 17011626 - 17011550
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  17011626 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 17011550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 265936 - 265860
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  265936 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 265860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 21504037 - 21503953
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 230  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  21504037 taagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 21503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 29448738 - 29448662
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  29448738 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 29448662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 30138244 - 30138295
Alignment:
Q  153 tgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  30138244 tgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggg 30138295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 21398956 - 21399029
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 223  Q
    ||||||||||||||| ||||||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatgagattt 21399029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 26762133 - 26762090
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  26762133 cagtgacagcatctcctgttttatgttcttgcgtctttttcaca 26762090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22881088 - 22881006
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  22881088 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 22881006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26360324 - 26360406
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  26360324 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 26360406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29324439 - 29324521
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  29324439 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 29324521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 17011455 - 17011415
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  17011455 tgacagcatcccctgtttcatgttcttgcgtctttttcaca 17011415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 17875952 - 17875897
Alignment:
Q  149 gaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||||||||| |||||||||  |||||| | ||||| |||||||||||||    
T  17875952 gaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggg 17875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 26749763 - 26749720
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  26749763 cagtgacagcatctcctgtttcatgttcttgcgtctttttcaca 26749720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 40917293 - 40917336
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||  |||||| ||||||||||||||||||||||    
T  40917293 cagtgacagcattttctgtttcatgttcttgcgtctttttcaca 40917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4398610 - 4398528
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||| ||| ||||||| ||||    
T  4398610 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatctggagaattgggaatt 4398528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 264262 - 264302
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  264262 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 264302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 8833530 - 8833570
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  8833530 tgacagcatctcctgtttcatgttcttgcgtctttttcaca 8833570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 20313169 - 20313089
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggttttt 230  Q
    |||||||||||| ||  |||||||| ||||| || ||||||||||  |||||||| ||||||| | ||||| |||| ||||    
T  20313169 aattgatgttcaagttatagaataaacatagattgagtttcctattgaatttgggatttgggtggttgaaaattgggtttt 20313089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 20909680 - 20909640
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  20909680 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 20909640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 23065182 - 23065142
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  23065182 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 23065142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 32607648 - 32607688
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  32607648 tgacagcatgccatgtttcatgttcttgcgtctttttcaca 32607688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 39245804 - 39245764
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  39245804 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 39245764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 39364052 - 39364012
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  39364052 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 39364012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 104 - 396
Target Start/End: Original strand, 22130136 - 22130428
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| |||||||   |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22130136 tgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgg 22130235  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    | ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22130236 gatttgggtagatgaaatttggtttttttgggtgaaaaatatgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 22130335  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22130336 ctgtaactatttcgctattagctcaattttcgctatcagcgaaactgcccagtgacagcataccctgttttatgttcttacgtctttttcaca 22130428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 148 - 396
Target Start/End: Original strand, 23194667 - 23194914
Alignment:
Q  148 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgc 247  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatttggtttttttgggtaaaaattctgc 23194766  T
Q  248 agaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaa 347  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23194767 agaaatcgtaacagcaagggaaaaactcgctagtagttcgctattagcgaaact-cctgtaactatttcgctattagctcacttttcgccattagcgaaa 23194865  T
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23194866 ttgcccagtgacagcataccctgttttatgttcttgcgtctttttcaca 23194914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 128 - 396
Target Start/End: Original strand, 45574154 - 45574415
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  45574154 aaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg-------ggtagatgaaatttggtt 45574246  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45574247 tttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttcgctattagctc 45574346  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    | ||||||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  45574347 acttttcgctatcagcgaaattgcccggtgacagcataccctgttttatgttcttgcgtctttttcaca 45574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 297400 - 297181
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaattgggggttaggttttggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  297400 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaagttatgaataaatttggtgaattgggaattgggggttaggttttggga 297301  T
Q  101 gtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatt 200  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  297300 gtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatt 297201  T
Q  201 tggggtttgggtagatgaaa 220  Q
    |||||||||||| |||||||    
T  297200 tggggtttgggtggatgaaa 297181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 7052171 - 7052418
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgca 248  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  7052171 aattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgca 7052270  T
Q  249 gaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaat 348  Q
    ||||||||||||| | |||||||||||||||| ||||||||||| ||||| | | ||||||| ||||||||||||||| | |||||||||||||||||||    
T  7052271 gaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatcactctgtaacaatttcgctattagctaacttttcgccattagcgaaat 7052370  T
Q  349 tgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||| |||||||||||| | |||||||||||||||||||||||||||||    
T  7052371 tgcacagtgacagcatacactgttttatgttcttgcgtctttttcaca 7052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 150 - 290
Target Start/End: Original strand, 24723618 - 24723758
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||| |||||||    
T  24723618 aattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatttgggttttttgggtgaaaaatgtgcag 24723717  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgcta 290  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  24723718 aaatcgtaacagcaggggaaaaactcgctagaagttcgcta 24723758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 8306498 - 8306349
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||| |||||||    
T  8306498 aattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaattttggttttttgggtgaaaa-tgtgcag 8306400  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaac 300  Q
    |||||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  8306399 aaatcgtaacagtaggggaaaaacttgctaggagttcgctattggcgaaac 8306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 28313290 - 28313174
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  28313290 tgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttga 28313191  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  28313190 ggtttgggtggatgaaa 28313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 13880671 - 13880745
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13880671 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45308192 - 45308124
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttgg 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  45308192 ggctaacttgcaatgattttagtttatataattctgattctgtttgacaaaagttatgaatgaatttgg 45308124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24088318 - 24088236
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  24088318 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttatgaataaatttggagaattgggaatt 24088236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 46197899 - 46197975
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  46197899 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 46197975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 17901960 - 17902032
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||    
T  17901960 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaatt 17902032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 6834060 - 6833988
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| ||| ||| |||||||||    
T  6834060 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttgatgaaatt 6833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 38056853 - 38056893
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38056853 taatcataggttaagtttcctatcaaatttggggtttgggt 38056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 50001374 - 50001298
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  50001374 taagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatgaaatt 50001298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 21188191 - 21188281
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 241  Q
    ||||||||||||||| |||||||||  ||| || | ||||||||||||||||||| ||||||||| || |||| || |||| ||||||||||    
T  21188191 aattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttt-tgggtgaaaa 21188281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20580367 - 20580286
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaag-ttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||  | |||| ||||||| |||||||| ||||||| ||||    
T  20580367 ggctaacttacaatgattttagtt-atataattctgattctgttttaataaagattatgaacaaatttggagaattgggaatt 20580286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 8276170 - 8276218
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  8276170 taatcataggttaagtttcctatcaaatttggagttttggtggatgaaa 8276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 29763806 - 29763862
Alignment:
Q  166 gtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  29763806 gtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaatt 29763862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 21239201 - 21239276
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 225  Q
    ||||| ||||||| | |||||||||||||||||  ||||| ||||||||||| || ||||||| ||||||| ||||    
T  21239201 aattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatgaaaattgg 21239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14431571 - 14431653
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  14431571 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 14431653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20632219 - 20632137
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  20632219 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 20632137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36182478 - 36182396
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  36182478 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 36182396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 44892178 - 44892136
Alignment:
Q  354 agtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  44892178 agtgacagcatttcctgtttcatgttcttgcgtctttttcaca 44892136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 45495373 - 45495449
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattg 76  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||    
T  45495373 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattg 45495449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 6833946 - 6833903
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||| |||||||| || |||||||||||||||||||    
T  6833946 cagtgacagcatcccctgtttcatattcttgcgtctttttcaca 6833903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 37359356 - 37359289
Alignment:
Q  16 attttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  37359356 attttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 37359289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 13989534 - 13989494
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  13989534 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 13989494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 16362587 - 16362547
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  16362587 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 16362547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Complemental strand, 20588396 - 20588360
Alignment:
Q  367 cctgttttatgttcttgcgtctttttcacaggttctg 403  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  20588396 cctgtttcatgttcttgcgtctttttcacacgttctg 20588360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Complemental strand, 20592934 - 20592898
Alignment:
Q  367 cctgttttatgttcttgcgtctttttcacaggttctg 403  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  20592934 cctgtttcatgttcttgcgtctttttcacacgttctg 20592898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 21046372 - 21046412
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  21046372 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 21046412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 21474580 - 21474620
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  21474580 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 21474620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 41225778 - 41225818
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  41225778 tgacagcatctcctgtttcatgttcttgcgtctttttcaca 41225818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 41227031 - 41227071
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  41227031 tgacagcatctcctgtttcatgttcttgcgtctttttcaca 41227071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 51082945 - 51082905
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  51082945 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 51082905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 115 - 396
Target Start/End: Complemental strand, 10025 - 9744
Alignment:
Q  115 ttgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtag 214  Q
    |||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  10025 ttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtag 9926  T
Q  215 atgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatt 314  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9925 atgaaatttgggttttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatt 9826  T
Q  315 tcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||||| ||||||| || ||||||||| | ||||||||||||  ||||||||||||||||||||| ||||||||    
T  9825 tcgctattagctcaattttcgctatcagcgaaatttctcagtgacagcataacctgttttatgttcttgcgtcattttcaca 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 128 - 396
Target Start/End: Original strand, 174243 - 174511
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  174243 aaaccatgacaattgtgttaagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagatttgggtagatgaaatttggtt 174342  T
Q  228 tttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctc 327  Q
    ||| | |||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||     
T  174343 tttttaggtgaaaaatgtgtagaaatcgtaacaacaacggaaaaactcgctaggagttcgctattggcgaaaccccttgtaacaatttcgctattagcta 174442  T
Q  328 agttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    | |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||    
T  174443 acttttcgcctttagcgaaattgctcagtgacagcataccctgttttatgttcttgcatttttttcaca 174511  T

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Target: chr8 (Bit Score: 175; Significance: 4e-94; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 104 - 396
Target Start/End: Original strand, 25483552 - 25483837
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25483552 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttgg 25483651  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    |        |||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25483652 ga-------agatgaaatttgttttttttgggtgaaaaatgtgcagaaatggtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactcc 25483744  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    || ||||||||| |||||||||||| ||||||| || |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||    
T  25483745 ctttaactattttgctattagctcacttttcgctatcagcgaaattgcctagtgacagcataccctattttatgttcttgcgtctttttcaca 25483837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 157 - 396
Target Start/End: Original strand, 36732649 - 36732887
Alignment:
Q  157 gttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 256  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||| ||||||||||||||    
T  36732649 gttcagattgtagaataatcataggtcaagtttcctatcaaatttgggatttgggtagacgaaatttgggttttttgggtgaaaaatgtgcagaaatcgt 36732748  T
Q  257 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagt 356  Q
    |||||| | ||||||||||||||| ||||||||||| ||||    | ||||||| ||||||||||||||| | |||||||||||||||||||||| ||||    
T  36732749 aacagc-atggaaaaactcgctagaagttcgctattggcgatttcctctgtaacaatttcgctattagctaaattttcgccattagcgaaattgcacagt 36732847  T
Q  357 gacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  36732848 gacagcataccttgttttatgttcttgcgtctttttcaca 36732887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 146 - 396
Target Start/End: Complemental strand, 22483678 - 22483435
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattg 244  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  ||||||||       |||||||||||||| ||||| ||||||| || ||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg-------tagatgaaatttgggtttttttgggtgataaatg 22483586  T
Q  245 tgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcg 344  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| || |||  |  |||||| |||||||||||||||   ||||||||||||| |    
T  22483585 tgcagaaatcgtaacagcaagggaaaa-ctcgctagaagttcgctattggcaaaatcctatgtaacaatttcgctattagctagattttcgccattagtg 22483487  T
Q  345 aaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||| |||||||| ||| |||||||| |||||| |||||||||||||||    
T  22483486 aaattgcacagtgacaacataccctgtttcatgttcatgcgtctttttcaca 22483435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 8413859 - 8413975
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8413859 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 8413958  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  8413959 ggtttgggtggatgaaa 8413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 19882889 - 19882773
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19882889 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 19882790  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  19882789 ggtttgggtggatgaaa 19882773  T

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Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17796266 - 17796185
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  17796266 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaggttatgaataaatttggtgaattgggaatt 17796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 23661214 - 23661140
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23661214 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 20455904 - 20455831
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 201  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20455904 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 20460882 - 20460809
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 201  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20460882 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

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Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 17460342 - 17460416
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17460342 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttg 17460416  T

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Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 20463112 - 20463042
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaa 198  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  20463112 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 20455168 - 20455095
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaattt 201  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  20455168 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10828671 - 10828753
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  10828671 ggctaacttgcaatgattttagtttatataattctgattctgttttaacaaaggttatgaataaatttggagaattgggaatt 10828753  T

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Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6607476 - 6607557
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  6607476 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 6607557  T

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Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 11775655 - 11775548
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  11775655 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca---------ataatcataggttaagtttcctatcaaatttgg 11775565  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  11775564 ggtttgggtggatgaaa 11775548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 14397031 - 14397138
Alignment:
Q  114 attgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggta 213  Q
    ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || |||||||     
T  14397031 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattt-ggatttgggtt 14397129  T
Q  214 gatgaaatt 222  Q
    |||||||||    
T  14397130 gatgaaatt 14397138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 25657668 - 25657744
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 25657744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10834122 - 10834204
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | | ||||||||||||||||| ||||||| ||||    
T  10834122 ggctaacttgcaatgattttagtttatataattctgattctgttttaacagaggttatgaataaatttggagaattgggaatt 10834204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21414445 - 21414527
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  21414445 ggctaacttgcaatgatattagtttatataattctgattctgttttaataaaggttatgaataaatttggagaattgggaatt 21414527  T

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Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9404912 - 9404993
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||| ||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  9404912 ggctaacttgcaatgattttagtttataaaattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 9404993  T

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Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 16198734 - 16198658
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  16198734 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 16198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 23478980 - 23478904
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  23478980 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatgaaatt 23478904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28854853 - 28854772
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaag-ttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  | |||| ||||||| |||||||| ||||||| ||||    
T  28854853 ggctaacttgcaatgattttag-ttatataattctgattctgttttaataaagattatgaacaaatttggagaattgggaatt 28854772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 19880721 - 19880663
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  19880721 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22058607 - 22058689
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||||||||||| ||||    
T  22058607 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggtgaattgggaatt 22058689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24707026 - 24707108
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||||||||| ||| ||||| |||||  | ||||||||||||||||||||| ||||||||||||    
T  24707026 ggctaacttacattaattttagtttatatgattttgattatgttttaacaaaagttatgaataaatttggagaattggaaatt 24707108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 22207999 - 22207956
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  22207999 cagtgacagcatctcctgttttatgttcttgcgtctttttcaca 22207956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17615819 - 17615737
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  17615819 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 17615737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 20879371 - 20879313
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| |||||||||  |||||| | ||||||| |||||||||||    
T  20879371 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggg 20879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 26454604 - 26454546
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||| | |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  26454604 taagaattaaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 12037316 - 12037384
Alignment:
Q  144 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    ||||| ||||| |||| |||| |||||||||||||||||  ||  |||||||||||||||| |||||||    
T  12037316 gttaataattggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggt 12037384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 21399439 - 21399399
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  21399439 tgacagcatgccctgtttcatgttcttgcgtctttttcaca 21399399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 21793932 - 21793892
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  21793932 tgacagcatgccctgtttcatgttcttgcgtctttttcaca 21793892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 17978737 - 17978780
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  17978737 cagtgacagcatctcctgtttcatgttcttgcgtctttttcaca 17978780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22144603 - 22144678
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaatt 75  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| |||||    
T  22144603 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaatt 22144678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 22474483 - 22474440
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  22474483 cagtgacagcatctcctgtttcatgttcttgcgtctttttcaca 22474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7300281 - 7300363
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||  ||||||| ||||    
T  7300281 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttgaagaattgggaatt 7300363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 20517218 - 20517268
Alignment:
Q  154 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  20517218 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 20517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 29763190 - 29763232
Alignment:
Q  354 agtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||  ||||||| ||||||||||||||||||||||    
T  29763190 agtgacagcatctcctgtttcatgttcttgcgtctttttcaca 29763232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 18612129 - 18612076
Alignment:
Q  342 gcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    |||||| ||||||||  |||||| ||||||||  ||||||||||||||||||||    
T  18612129 gcgaaaatgcccagttccagcatcccctgtttcgtgttcttgcgtctttttcac 18612076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 36405382 - 36405423
Alignment:
Q  355 gtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||  ||||||| ||||||||||||||||||||||    
T  36405382 gtgacagcatctcctgtttcatgttcttgcgtctttttcaca 36405423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 1485070 - 1485030
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  1485070 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 1485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 4381116 - 4381156
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  4381116 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 4381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 4483948 - 4483908
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  4483948 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 4483908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 4541867 - 4541907
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  4541867 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 4541907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 5852786 - 5852826
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  5852786 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 5852826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 14408938 - 14408978
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  14408938 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 14408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 22258627 - 22258667
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  22258627 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 22258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 23914652 - 23914612
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  23914652 tgacagcatatcctgtttcatgttcttgcgtctttttcaca 23914612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 24485529 - 24485577
Alignment:
Q  348 ttgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||| ||||||||||||   |||||| ||||||||||||||||||||||    
T  24485529 ttgcacagtgacagcatcttctgtttcatgttcttgcgtctttttcaca 24485577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 128 - 391
Target Start/End: Complemental strand, 9008 - 8751
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtt 227  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||    
T  9008 aaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg-------tagatgaaatttggtt 8916  T
Q  228 tttctggg-tgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagct 326  Q
    ||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  8915 ttttttggatgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaaccctctgtaacaatttcgctattagct 8816  T
Q  327 cagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttt 391  Q
     |||||||||||||||||||||| |   |||||| ||| |||||||| |||||||||||||||||    
T  8815 aagttttcgccattagcgaaattacatggtgacaacataccctgtttcatgttcttgcgtctttt 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 104 - 396
Target Start/End: Complemental strand, 2066 - 1774
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| |||| |||  |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  2066 tgatttttgaattgaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgg 1967  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactcc 303  Q
    | |||||||| ||||||||||| |||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| | |     
T  1966 gatttgggtatatgaaatttgggttttttggatgaaaaatgtgcagaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatccct 1867  T
Q  304 ctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||| ||||||||||| ||| | ||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  1866 ctgtaacaatttcgctattcgctaacttttcgctattagcgaaattgctcagtgacagcataccctgttttatgttcttgcatctttttcaca 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 132 - 396
Target Start/End: Complemental strand, 8077 - 7822
Alignment:
Q  132 catggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttc 231  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||     
T  8077 catggcaattgttttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg-------tagatgaaatttggtttttt 7985  T
Q  232 tgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagtt 331  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | || |||| |||| |||||| ||| | ||    
T  7984 tgggtgaaaat-gtgcagaaatcgtaacagcaagggaaaaactcgctaggagatcgctattggcgaaacactct-taacaattttgctattcgctaactt 7887  T
Q  332 ttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  7886 ttcgccattagcaaaattgctcagtgacagcataccctgttttatgttcttgcgtctttttcaca 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 396
Target Start/End: Complemental strand, 22020 - 21770
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 245  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgt 21921  T
Q  246 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcga 345  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||||||| |  |||||| ||||||||||||||| |  |||||| ||||||||    
T  21920 gcagaaatcgtaacagtgggggaaaaactcgctagaagttcgctattggcgaaaccctttgtaacaatttcgctattagctaaagtttcgctattagcga 21821  T
Q  346 aattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||  |||||||||||| |||| ||||||||||||||||||||||||||    
T  21820 aattgtacagtgacagcataccctattttatgttcttgcgtctttttcaca 21770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 126; Significance: 7e-65; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 156 - 396
Target Start/End: Original strand, 106325 - 106566
Alignment:
Q  156 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg-tttttctgggtgaaaattgtgcagaaatc 254  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||  || |||||||||||||||| ||||| | |||||||| ||| ||||||||    
T  106325 tgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatttgggtttttttaggtgaaaaatgttcagaaatc 106424  T
Q  255 gtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgccca 354  Q
    ||||||| | |||||||||||||||  ||||||||||| ||||| | | ||||||| ||||||||||| ||| | ||||||| |||||||||||||| ||    
T  106425 gtaacagtaggggaaaaactcgctattagttcgctattggcgaatccctctgtaacaatttcgctattggctaacttttcgctattagcgaaattgcaca 106524  T
Q  355 gtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||| |||  ||||||||||||||||||||||||||||||    
T  106525 gtgacaacataacctgttttatgttcttgcgtctttttcaca 106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 13313 - 13353
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  13313 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 13353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 146 - 396
Target Start/End: Original strand, 8951 - 9194
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgt 245  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||||||  ||||||       |||||||||||||||| |||| |||||||||| | |    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttg-------ggtagatgaaatttgggttttttgggtgaaaaatat 9043  T
Q  246 gcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcga 345  Q
    ||| |||||||||| ||| |||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||| | ||||| ||||||||||    
T  9044 gcataaatcgtaactgcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattagctaacttttcaccattagcga 9143  T
Q  346 aattgcccagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||| |||||||||||| ||||||||||||||||||  |||||||||||    
T  9144 aattgcacagtgacagcataccctgttttatgttcttgtatctttttcaca 9194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 188 - 396
Target Start/End: Complemental strand, 19234981 - 19234774
Alignment:
Q  188 ttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcg 287  Q
    ||||||||||||||||| |||| ||||||||||||||  |||| |||||||||| |||||||||||||||||| || |||||||||||||||| ||||||    
T  19234981 ttcctatcaaatttgggatttgagtagatgaaatttgagttttttgggtgaaaaatgtgcagaaatcgtaacaacaggggaaaaactcgctagaagttcg 19234882  T
Q  288 ctattagcgaaactccctgtaactatttcgctattagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttcttgcgtc 387  Q
    ||||| ||||||  | ||||||| ||||||| | |||| ||  ||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  19234881 ctattggcgaaatcctctgtaacaatttcgcaaatagc-catatttcgccattagcgaaattgcacagtgacaacataccctgtttcatgttcttgcgtc 19234783  T
Q  388 tttttcaca 396  Q
    |||||||||    
T  19234782 tttttcaca 19234774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 158 - 396
Target Start/End: Complemental strand, 35057430 - 35057193
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaat-tgtgcagaaatcgt 256  Q
    ||||||| ||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||||  |||  |||||| ||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatttggatttt-tgggtgaaaaagtgtttagaaattgt 35057332  T
Q  257 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 355  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||  | ||||||| ||||| ||| |||| ||| |||||||||||||| ||||||| |||    
T  35057331 aacagcaggggaaaa-ctcgctagaagttcgctattggcgaaatcctctgtaacaatttcactaatagc-cagattttcgccattagcaaaattgcacag 35057234  T
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  35057233 tgacagcataccctgtttcatgttcttgcgtctttttcaca 35057193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 12943103 - 12942955
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||||||| | ||||||    
T  12943103 aattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaa 12943004  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||  ||||||| |||||||||||||||||||||||||||| |||||||    
T  12943003 taaatataggttgagtttcctatcaaatttggggtttgggtggatgaaa 12942955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 28288586 - 28288733
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 171  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||  ||| ||| |||| |||||||||||||||| ||||||||| | ||||||    
T  28288586 aattgggaattgggggttaggttttgg-agtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 28288684  T
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  28288685 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 28288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 13765288 - 13765172
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13765288 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 13765189  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  13765188 ggtttgggtggatgaaa 13765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 23956804 - 23956688
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23956804 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23956705  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  23956704 ggtttgggtggatgaaa 23956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 31021866 - 31021948
Alignment:
Q  138 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31021866 aattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 31021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 396
Target Start/End: Complemental strand, 13285634 - 13285397
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 256  Q
    ||||||| ||||||||||| || |||||||||||||||||||| ||| |||||   |||||||||||| |||| |||| | |||| |||| |||||||||    
T  13285634 ttcaggttgtagaataatcttaagttaagtttcctatcaaattagggatttggaatgatgaaatttgggtttt-tgggcgaaaaagtgtgtagaaatcgt 13285536  T
Q  257 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 355  Q
    |||||  || | |||||||||||| |||| |||||| ||||||  | ||||||| ||||||| | |||  ||| |||||||||||||||||||||| ||     
T  13285535 aacag-tagcggaaaactcgctagaagtttgctattggcgaaatcctctgtaacaatttcgcgaatag-acagattttcgccattagcgaaattgcacaa 13285438  T
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||| ||| || ||||| |||||||||||||| |||||||    
T  13285437 tgacatcataccatgtttcatgttcttgcgtctgtttcaca 13285397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25808166 - 25808085
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  25808166 ggctaacttgcaatgattttagtttatataattctgattctgtttggcaaaggttatgaataaatttggtgaattgggaatt 25808085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 23225968 - 23226066
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23225968 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 23415846 - 23415728
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| |||||||| |||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  23415846 tgatttttgaattgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 23415747  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  23415746 gatttgggttgatgaaatt 23415728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15540180 - 15540099
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||    
T  15540180 ggctaacttgcaatgattttagtttatataattctgatactgtttggcaaaagttacgaataaatttggtgaattgggaatt 15540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 25619032 - 25619106
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25619032 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 611717 - 611641
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  611717 aaaccatgacaattgtgttaggaattaatgttcaggtggtagaataatcataggttaagtttcctaacaaatttggg 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 20556167 - 20556243
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  20556167 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 20556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 14978676 - 14978739
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcc 191  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14978676 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcc 14978739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 27557604 - 27557486
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||  | ||||||||||| |||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||    
T  27557604 tgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgg 27557505  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | |||| || |||||||||    
T  27557504 gatttgagtcgatgaaatt 27557486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15685319 - 15685401
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||  | ||||||||||||||||||||  ||||||| ||||    
T  15685319 ggctaacttgcaatgattttagtttatataattatgattatgttttaacaaaagttatgaataaatttgaagaattgggaatt 15685401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 15891723 - 15891799
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15891723 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 15900808 - 15900884
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||| ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15900808 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 15900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 29045158 - 29045086
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  29045158 aattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatgaaatt 29045086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12596860 - 12596778
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||||||||||| ||||    
T  12596860 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggtgaattgggaatt 12596778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 15173607 - 15173683
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| ||||||   |||| |||| |||||||| |||||||||||||||||||| ||||| | |||||||||    
T  15173607 taagaattgaagttcagcctgtaggataaacataggttgagtttcctatcaaatttgggatttggattgatgaaatt 15173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 19825667 - 19825715
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  19825667 taatcataggttaagtttcctatcaaatttggagtttaggtggatgaaa 19825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 5833817 - 5833863
Alignment:
Q  156 tgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  5833817 tgttcaggttgtagaataatcatatgttaagtgtcctatcaaatttg 5833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8523833 - 8523751
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  8523833 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 8523751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16103246 - 16103164
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  16103246 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 16103164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22593183 - 22593101
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  22593183 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 22593101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 19825809 - 19825852
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||||| ||||||||  |||||||||||||||||||||    
T  19825809 cagtgacagcataccctgtttcgtgttcttgcgtctttttcaca 19825852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 18585577 - 18585519
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  18585577 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 18585519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 2290674 - 2290714
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  2290674 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 2290714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 14993674 - 14993611
Alignment:
Q  177 ataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 241  Q
    |||||| | ||||||| ||||||||||| ||||||||| ||||||| || |||| ||||||||||    
T  14993674 ataggtaatgtttcctgtcaaatttgggatttgggtagttgaaattggggtttt-tgggtgaaaa 14993611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 18334086 - 18334126
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  18334086 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 18334126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 23415633 - 23415593
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  23415633 tgacagcattccctgtttcgcgttcttgcgtctttttcaca 23415593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 24423215 - 24423175
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  24423215 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 24423175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 25601600 - 25601640
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||| ||| |||||||| ||||||||||||||||||||||    
T  25601600 tgacaacataccctgtttcatgttcttgcgtctttttcaca 25601640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 27557391 - 27557351
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  27557391 tgacagcattccctgtttcgcgttcttgcgtctttttcaca 27557351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 33864946 - 33864906
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  33864946 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 33864906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 256
Target Start/End: Original strand, 39923 - 40075
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39923 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgg 40022  T
Q  204 ggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcagaaatcgt 256  Q
    | |||||||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  40023 gatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcagaagtcgt 40075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47546 - 47505
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctg 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47546 ggctaacttgcaatgattttagtttatataattctgattctg 47505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 150 - 309
Target Start/End: Complemental strand, 21434 - 21275
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtgcag 249  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||    
T  21434 aattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatgaaatttggtttttttgggtgaaaaatgtgcag 21335  T
Q  250 aaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaa 309  Q
    |||||||||||  | |||||||||||||||| ||||||||||| || |||| | ||||||    
T  21334 aaatcgtaacaataggggaaaaactcgctagaagttcgctattggcaaaaccctctgtaa 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 169381 - 169265
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  169381 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 169282  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  169281 ggtttgggtggatgaaa 169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 176734 - 176618
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  176734 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 176635  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  176634 ggtttgggtggatgaaa 176618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 158 - 360
Target Start/End: Original strand, 35652 - 35845
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtg-aaaattgtgcagaaatcgt 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||         |||||| |||| |||| |||||||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaatt---------tgggtgaaaaaatgtgtagaaatcgt 35742  T
Q  257 aacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcag-ttttcgccattagcgaaattgcccag 355  Q
    |||||| |||  |||||||||||| ||||| ||||| ||||||  | ||||||| ||||||||||||| |||| ||||||||||||||||||||||  ||    
T  35743 aacagc-aggagaaaactcgctagaagttctctattggcgaaatcctctgtaacaatttcgctattag-tcagattttcgccattagcgaaattgcatag 35840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 1081 - 960
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1081 tgatttttgaattgaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgg 982  T
Q  204 ggtttgggtagatgaaatttgg 225  Q
    | ||||||| | ||||| ||||    
T  981 gatttgggttggtgaaaattgg 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 7121 - 7237
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||||    
T  7121 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 7220  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  7221 ggtttgggtggatgaaa 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 3905 - 3789
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||||| ||||||||||| || |||||| |||||||| |||||||||||||||||||    
T  3905 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttgg 3806  T
Q  204 ggtttgggtagatgaaa 220  Q
    ||||||||| |||||||    
T  3805 ggtttgggtggatgaaa 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 21901 - 21817
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  21901 aaaccatggcaattgtgttaacaattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggt 21817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 2230 - 2305
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  2230 aaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttgg 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 18535 - 18419
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  18535 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 18436  T
Q  204 ggtttgggtagatgaaa 220  Q
    | ||||||| |||||||    
T  18435 gatttgggttgatgaaa 18419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 18322 - 18282
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  18322 tgacagcattccctgtttcgcgttcttgcgtctttttcaca 18282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 2162 - 2236
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2162 aaaccatggtaattgtgttaagaactgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 990 - 916
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  990 aaaccatggtaattgtgttaagagttgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 1185 - 1259
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1185 aaaccatggtaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 28446 - 28373
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaattt 223  Q
    |||||||| |||||| ||||||||| ||||||   ||||| |||| ||||| ||| ||||||||||||| ||||    
T  28446 aattgatggtcaggttgtagaataaacataggaagagttttctataaaattagggatttgggtagatgagattt 28373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 2708 - 2612
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaattgtg 246  Q
    ||||| ||||||| | || ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| ||||    
T  2708 aattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatgaaatttgggttttttgggtgaaaaatgtg 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 12967 - 12891
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||    
T  12967 aaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttttctaacaaatttggg 12891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 72354 - 72278
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  72354 aaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 72278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 70007 - 70083
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  |||||| ||  ||||||| |||||||||||||||||||| ||||||| |||||||||    
T  70007 taagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 70083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 983 - 917
Alignment:
Q  138 aattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  983 aattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 23258 - 23332
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttg 202  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||    
T  23258 aaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacgaatttg 23332  T

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Target: scaffold0061 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 14740 - 14814
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 14814  T

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Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 23798 - 23872
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaa 23872  T

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Target: scaffold0051 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 32084 - 31967
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||||||||||||| |||| |||||||  ||||||||| |||||||| |||||||||||||||||||    
T  32084 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgg 31986  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | ||||||| |||||||||    
T  31985 gatttgggttgatgaaatt 31967  T

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Target: scaffold0141 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34048 - 33967
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  34048 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 33967  T

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Target: scaffold0049 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 80764 - 80845
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||||||||||| ||||||| ||||    
T  80764 ggctaacttgcaatgattttagtttatataattctgattctgtttaataaagattatgaataaatttggagaattgggaatt 80845  T

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Target: scaffold0046 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 21931 - 22007
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 22007  T

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Target: scaffold0586 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4797 - 4715
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||    
T  4797 ggctaacttgcaatgatattagtttatataattctgattctgttttaataaaggttatgaataaatttggagaattgggaatt 4715  T

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Target: scaffold0293 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 19410 - 19528
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||| |||||||  ||||||||| |||| ||| |||||||||||||||||||    
T  19410 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgg 19509  T
Q  204 ggtttgggtagatgaaatt 222  Q
    | | || || |||||||||    
T  19510 gatatgagttgatgaaatt 19528  T

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Target: scaffold0083 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 42214 - 42153
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttt 189  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42214 aaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttt 42153  T

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Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 1835 - 1759
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||    
T  1835 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatgaaatt 1759  T

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Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 1664 - 1624
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  1664 tgacagcatcccctgttttgcgttcttgcgtctttttcaca 1624  T

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Target: scaffold0138 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 20995 - 20919
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  20995 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 20919  T

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Target: scaffold0037 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 82915 - 82839
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||  |||||||||||||||||||||||| || |||||||||||||| ||||||||| ||| ||||||||||    
T  82915 aaaccatgataattgtgttaagaattgatgttcaagttgtagaataatcatacgttaagttttctaacaaatttggg 82839  T

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Target: scaffold0034 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 29370 - 29446
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  29370 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaatt 29446  T

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Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33944 - 34026
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctg-tttggaaaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||  ||||| || ||||||||||||||||||||||| ||| | ||| |||||| |||  ||||| ||||||||||||    
T  33944 ggctaactctcaatggttatagtttatataattctgattctgttttagcaaaggttatggatagttttggagaattggaaatt 34026  T

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Target: scaffold0462 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1156 - 1089
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 225  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 1089  T

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Target: scaffold0462; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 6662 - 6595
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 225  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgg 6595  T

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Target: scaffold0462; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 11121 - 11045
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| ||||  || |||||||||||||||||||| ||| ||| |||||||||    
T  11121 taagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatgaaatt 11045  T

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Target: scaffold0439 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 12139 - 12081
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  12139 taagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggg 12081  T

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Target: scaffold0395 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7759 - 7841
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||  ||| |||||| ||||||||||||    
T  7759 ggctaatttgcaatgattttagtttatataattctgattctgttttaacaaaagttattgatagatttggagaattggaaatt 7841  T

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Target: scaffold0220 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 13820 - 13772
Alignment:
Q  172 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13820 taatcataggttaagtttcctatcaaatttggggtttgggtggatgaaa 13772  T

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Target: scaffold0023 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 163251 - 163175
Alignment:
Q  128 aaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||  |||||| | ||| | |||||||||||||    
T  163251 aaaccatggtaattgtgttaagaattgatgttcaggttgtagaataacaataggtgatgttccttatcaaatttggg 163175  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 95079 - 95039
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  95079 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 95039  T

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Target: scaffold0213 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19001 - 18934
Alignment:
Q  158 ttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttgg 225  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  | || |||||||||||||||||    
T  19001 ttcaggttgtagaataatcatatgttaagtttcctatcaaatttttgattagggtagatgaaatttgg 18934  T

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Target: scaffold0117 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 42613 - 42514
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 203  Q
    ||||| ||| ||||||||  ||| ||||||| | ||| |||||||||||||| |||||||  ||||||||| | |||||| |||||||||||||||||||    
T  42613 tgatttttgaattgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttgg 42514  T

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Target: scaffold0436 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 8858 - 8782
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    |||||||||| |||||||  ||||||||| |||||||| |||||||||||||||||| | |||| || |||||||||    
T  8858 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaatt 8782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 28608 - 28536
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||||||||||||| |||||||||| ||| || | ||||||| ||||||||||| ||||||||| |||||||    
T  28608 aattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatttgggtagttgaaatt 28536  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 18824 - 18882
Alignment:
Q  174 atcataggttaagtttcctatcaaatttggggtttgggtagatgaaa--tttggttttt 230  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  18824 atcataggttaagtttcctatcaaatttgtggtttgggtggatgaaaattttggttttt 18882  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 35390 - 35319
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatg 217  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||  |||||||| ||| ||| ||||    
T  35390 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggatttaggttgatg 35319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 106357 - 106275
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||||||||||| ||||    
T  106357 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggtgaattgggaatt 106275  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 66237 - 66308
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatt 222  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||||||| |||| || |||||||||    
T  66237 aattggtgttcaggttgtagaataatcataggtagagttt-ctatcaaatttgggatttgagttgatgaaatt 66308  T

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Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 385133 - 385084
Alignment:
Q  72 aattggaaattgggggttaggttttgggagtatgattcttggattgaaaa 121  Q
    |||||| |||||||| ||||||||| ||||||||||| ||||||||||||    
T  385133 aattgggaattggggattaggtttttggagtatgatttttggattgaaaa 385084  T

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Target: scaffold0525 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7623 - 7705
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  7623 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 7705  T

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Target: scaffold0525; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10073 - 9991
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||| ||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  10073 ggctaacttacattaattttagtgtatatgattctaattatgttttaacaaaagttatgaataaatttggagaattgggaatt 9991  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 5774 - 5836
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| ||  |||||||| |||||||    
T  5774 aattgatgttcaggttgtagaataaacataggttgagtttcccattgaatttgggatttgggt 5836  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 133188 - 133270
Alignment:
Q  1 ggctaacttgcaatgattttagtttatataattctgattctgtttgga-aaaagttatgaataaatttggtgaattggaaatt 82  Q
    ||||||||| || | |||||||| ||||| ||||||||| |||||  | ||||||||||||||||||||| ||||||| ||||    
T  133188 ggctaacttacattaattttagtgtatatgattctgattatgttttaacaaaagttatgaataaatttggagaattgggaatt 133270  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 2134 - 2075
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttg 209  Q
    ||||| ||||||||| |||||||||||||||||  | ||| |||||||||||||| ||||    
T  2134 aattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttgggatttg 2075  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 10767 - 10806
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtcttttt 392  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  10767 cagtgacagcatctcctgttttatgttcttgcgtcttttt 10806  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 17991 - 18034
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  17991 cagtgacagcatctcctgtttcatgttcttgcgtctttttcaca 18034  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 38600 - 38690
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttctgggtgaaaa 241  Q
    ||||||||||||||| || ||||||  |||||| | ||||| | ||||||||| | ||||||||| ||||||| || |||| ||||||||||    
T  38600 aattgatgttcaggttgtggaataacaataggtaatgtttcttgtcaaatttgagatttgggtagttgaaattggggtttt-tgggtgaaaa 38690  T

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Target: scaffold0278 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 23829 - 23887
Alignment:
Q  104 tgattcttggattgaaaatcgtaaaaaccatggcaattgtgttaagaattgatgttcag 162  Q
    ||||| ||| ||||||||  ||| ||||||| | |||||||||||||||||||||||||    
T  23829 tgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 6948 - 7006
Alignment:
Q  146 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||||||||||| |||||||||  ||| || | ||||| |||||||||||||    
T  6948 taagaattgatgttcaggttgtagaataacaatatgtgatgtttcttatcaaatttggg 7006  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 8735 - 8673
Alignment:
Q  150 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 212  Q
    ||||| ||||||||| | ||| |||||||||||  ||||| |||||||||||||| |||||||    
T  8735 aattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttgggatttgggt 8673  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 23292 - 23250
Alignment:
Q  361 gcattccctgttttatgttcttgcgtctttttcacaggttctg 403  Q
    |||| |||||||| ||||||||||||||||||||||| |||||    
T  23292 gcataccctgtttcatgttcttgcgtctttttcacagtttctg 23250  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Original strand, 10249 - 10291
Alignment:
Q  353 cagtgacagcattccctgttttatgttcttgcgtctttttcac 395  Q
    ||||||||||||  ||||||| |||||||||||||||||||||    
T  10249 cagtgacagcatctcctgtttcatgttcttgcgtctttttcac 10291  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 19022 - 19072
Alignment:
Q  154 gatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 204  Q
    ||||||||||| |||||||||  |||||| | |||||||||||||||||||    
T  19022 gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 19072  T

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Target: scaffold0256 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 2005 - 2042
Alignment:
Q  156 tgttcaggtggtagaataatcataggttaagtttccta 193  Q
    |||||| || ||||||||||||||||||||||||||||    
T  2005 tgttcatgttgtagaataatcataggttaagtttccta 2042  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 5036 - 5076
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  5036 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 5076  T

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Target: scaffold0515 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 4763 - 4723
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  4763 tgacagcatcccctgtttcacgttcttgcgtctttttcaca 4723  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 14061 - 14021
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  14061 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 14021  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 4763 - 4723
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  4763 tgacagcatcccctgtttcacgttcttgcgtctttttcaca 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 38490 - 38450
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  38490 tgacagcatgtcctgtttcatgttcttgcgtctttttcaca 38450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 7106 - 7146
Alignment:
Q  356 tgacagcattccctgttttatgttcttgcgtctttttcaca 396  Q
    ||||||||| |||| ||| ||||||||||||||||||||||    
T  7106 tgacagcatgccctatttcatgttcttgcgtctttttcaca 7146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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