View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12259_low_7 (Length: 343)
Name: NF12259_low_7
Description: NF12259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12259_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 16 - 338
Target Start/End: Complemental strand, 41641692 - 41641370
Alignment:
| Q |
16 |
atctcaatctcttcattcctataaagttcatctattatcaaaagtgtctcaattgcattcatctcgtgtgcactctccacatgctttggtccataacata |
115 |
Q |
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| T |
41641692 |
atctcaatctcttcattcctataaagttcatctattatcaaaagtgtctcaattgcattcatctcgtgtgcactctccacatgctttggtccataacata |
41641593 |
T |
|
| Q |
116 |
cacgatctgaactgttgcacaccatgtcccataattccttaaaagccctaatttctaaccctaagttactgtcctttattaaattcatcaccgccgcgtc |
215 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
41641592 |
cacgatctgaactgtcgcacaccatgtcccataattccttaaaagccctaatttctaaccctaagttactgtcctttattaaattcatcaccgctgcgtc |
41641493 |
T |
|
| Q |
216 |
attgaaaacttcccttaaatcgaagttacaattactcttgttgttgttgttacaccgtgaccccacaactacgatacgtgatttgttctcttctatacac |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41641492 |
attgaaaacttcccttaaatcgaagttacaattactcttgttgttgttgttacaccgtgaccccacaactacgatacgtgatttgttctcttctatacac |
41641393 |
T |
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| Q |
316 |
ctcatctttaacctctctgcttc |
338 |
Q |
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|||||||||||||||| |||||| |
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| T |
41641392 |
ctcatctttaacctctttgcttc |
41641370 |
T |
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