View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12261_high_2 (Length: 654)

Name: NF12261_high_2
Description: NF12261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12261_high_2
NF12261_high_2
[»] chr6 (43 HSPs)
chr6 (11-650)||(19305207-19305846)
chr6 (274-568)||(20148142-20148434)
chr6 (274-568)||(22184394-22184686)
chr6 (128-507)||(33596747-33597128)
chr6 (194-412)||(18147287-18147505)
chr6 (194-387)||(30680998-30681191)
chr6 (92-383)||(689646-689938)
chr6 (281-438)||(9277280-9277436)
chr6 (309-592)||(14080286-14080567)
chr6 (194-418)||(11087477-11087701)
chr6 (195-390)||(22572048-22572242)
chr6 (273-411)||(31295506-31295644)
chr6 (295-366)||(3404855-3404926)
chr6 (294-433)||(34187259-34187397)
chr6 (272-418)||(9291990-9292135)
chr6 (275-369)||(15480314-15480408)
chr6 (271-368)||(16130993-16131090)
chr6 (267-427)||(34064161-34064321)
chr6 (273-367)||(17380123-17380217)
chr6 (271-373)||(34572963-34573065)
chr6 (317-625)||(19331695-19332003)
chr6 (275-390)||(9403175-9403290)
chr6 (275-390)||(19730564-19730679)
chr6 (271-411)||(12449552-12449692)
chr6 (271-359)||(31423806-31423894)
chr6 (287-390)||(4251029-4251132)
chr6 (271-410)||(12424283-12424422)
chr6 (274-384)||(14268440-14268551)
chr6 (276-370)||(10115659-10115753)
chr6 (271-361)||(19277045-19277135)
chr6 (271-365)||(18566685-18566779)
chr6 (281-345)||(12203617-12203681)
chr6 (271-411)||(27860917-27861057)
chr6 (284-423)||(22497280-22497419)
chr6 (309-389)||(25008398-25008477)
chr6 (274-321)||(27772537-27772584)
chr6 (294-418)||(10926886-10927010)
chr6 (274-423)||(16343549-16343698)
chr6 (499-632)||(18566418-18566551)
chr6 (498-631)||(14184742-14184877)
chr6 (276-388)||(12487970-12488082)
chr6 (499-539)||(13823574-13823614)
chr6 (275-323)||(22692162-22692210)
[»] chr7 (30 HSPs)
chr7 (91-420)||(26762698-26763029)
chr7 (276-412)||(9135335-9135471)
chr7 (195-388)||(5863192-5863385)
chr7 (276-461)||(39879318-39879505)
chr7 (271-439)||(29373400-29373568)
chr7 (281-416)||(7486522-7486657)
chr7 (271-412)||(10287565-10287706)
chr7 (301-418)||(9867938-9868055)
chr7 (271-411)||(13292092-13292232)
chr7 (282-412)||(12644766-12644897)
chr7 (271-461)||(16987061-16987252)
chr7 (308-423)||(21161212-21161326)
chr7 (194-389)||(43171928-43172114)
chr7 (271-412)||(5925444-5925585)
chr7 (275-345)||(16203770-16203840)
chr7 (275-344)||(16204340-16204409)
chr7 (274-387)||(34854249-34854362)
chr7 (275-418)||(9573400-9573542)
chr7 (282-390)||(5928991-5929099)
chr7 (499-563)||(9573602-9573666)
chr7 (274-333)||(12265097-12265156)
chr7 (347-414)||(18773960-18774027)
chr7 (21-68)||(48374437-48374484)
chr7 (272-310)||(4781470-4781508)
chr7 (272-310)||(4813901-4813939)
chr7 (69-172)||(16203944-16204049)
chr7 (193-238)||(16204445-16204491)
chr7 (347-411)||(1979044-1979108)
chr7 (195-238)||(16203876-16203920)
chr7 (24-68)||(27949408-27949452)
[»] chr4 (24 HSPs)
chr4 (128-423)||(12683755-12684051)
chr4 (128-423)||(29157072-29157366)
chr4 (271-390)||(47253280-47253399)
chr4 (193-372)||(19643723-19643901)
chr4 (193-384)||(2674465-2674652)
chr4 (271-405)||(19809689-19809823)
chr4 (274-418)||(15514533-15514677)
chr4 (271-387)||(5518546-5518662)
chr4 (311-418)||(14003073-14003180)
chr4 (271-411)||(15742122-15742262)
chr4 (303-423)||(19818664-19818783)
chr4 (276-390)||(14601989-14602103)
chr4 (308-423)||(10981836-10981950)
chr4 (271-390)||(16012441-16012559)
chr4 (338-407)||(13171065-13171134)
chr4 (273-321)||(50151775-50151823)
chr4 (271-321)||(3642975-3643025)
chr4 (271-417)||(13896448-13896594)
chr4 (505-559)||(15789915-15789969)
chr4 (498-533)||(18463660-18463695)
chr4 (273-372)||(26894693-26894791)
chr4 (271-416)||(17110675-17110819)
chr4 (281-321)||(13171137-13171177)
chr4 (281-333)||(40979050-40979102)
[»] chr5 (23 HSPs)
chr5 (192-461)||(26994496-26994766)
chr5 (281-434)||(22903052-22903205)
chr5 (193-409)||(32418377-32418593)
chr5 (271-418)||(25537380-25537527)
chr5 (271-387)||(27083207-27083322)
chr5 (271-364)||(20025312-20025405)
chr5 (273-410)||(22865744-22865881)
chr5 (271-373)||(24647308-24647410)
chr5 (281-372)||(25333756-25333847)
chr5 (276-414)||(8938891-8939028)
chr5 (277-368)||(34493542-34493629)
chr5 (482-563)||(20025134-20025215)
chr5 (482-625)||(22902882-22903025)
chr5 (319-369)||(19993182-19993232)
chr5 (350-414)||(26348127-26348191)
chr5 (347-414)||(18799759-18799826)
chr5 (89-152)||(19990860-19990925)
chr5 (284-390)||(25828970-25829076)
chr5 (272-310)||(26348061-26348099)
chr5 (272-310)||(31202345-31202383)
chr5 (337-409)||(19846053-19846125)
chr5 (271-307)||(21213329-21213365)
chr5 (21-69)||(32401252-32401300)
[»] chr1 (30 HSPs)
chr1 (271-536)||(26977597-26977862)
chr1 (128-568)||(22414600-22415041)
chr1 (196-444)||(16050343-16050591)
chr1 (275-418)||(34273062-34273205)
chr1 (275-413)||(12177366-12177504)
chr1 (272-412)||(16030376-16030516)
chr1 (295-390)||(5671773-5671868)
chr1 (281-409)||(52565564-52565692)
chr1 (285-435)||(33101490-33101640)
chr1 (285-496)||(23280245-23280454)
chr1 (273-439)||(25408050-25408216)
chr1 (200-383)||(2140846-2141025)
chr1 (272-390)||(23728790-23728908)
chr1 (281-438)||(18246098-18246254)
chr1 (275-421)||(1659762-1659908)
chr1 (271-418)||(4601456-4601603)
chr1 (276-418)||(2612638-2612779)
chr1 (295-438)||(5459702-5459844)
chr1 (273-423)||(21682561-21682711)
chr1 (482-558)||(5459867-5459943)
chr1 (271-350)||(12032222-12032300)
chr1 (273-411)||(8018931-8019068)
chr1 (323-411)||(14255051-14255139)
chr1 (308-439)||(43344450-43344579)
chr1 (348-414)||(48637530-48637596)
chr1 (275-415)||(21098819-21098958)
chr1 (21-68)||(39019702-39019749)
chr1 (339-409)||(16522759-16522829)
chr1 (595-641)||(26977524-26977570)
chr1 (319-415)||(16299591-16299687)
[»] chr2 (31 HSPs)
chr2 (91-405)||(24499777-24500089)
chr2 (128-435)||(12127487-12127796)
chr2 (69-418)||(3586338-3586690)
chr2 (271-418)||(12168947-12169095)
chr2 (193-423)||(36267468-36267698)
chr2 (271-418)||(15825129-15825276)
chr2 (194-423)||(45258044-45258273)
chr2 (282-411)||(45714977-45715106)
chr2 (271-641)||(15390554-15390924)
chr2 (272-411)||(19919036-19919175)
chr2 (299-412)||(20120328-20120441)
chr2 (295-435)||(27846512-27846652)
chr2 (272-412)||(18135852-18135992)
chr2 (469-625)||(19919212-19919368)
chr2 (271-388)||(29711023-29711138)
chr2 (281-418)||(10923144-10923281)
chr2 (315-409)||(18770296-18770392)
chr2 (273-439)||(23257736-23257901)
chr2 (271-409)||(24157275-24157413)
chr2 (276-346)||(18772295-18772365)
chr2 (305-409)||(24755452-24755556)
chr2 (274-385)||(19050407-19050518)
chr2 (91-222)||(23493812-23493945)
chr2 (273-323)||(17658030-17658079)
chr2 (273-323)||(17672042-17672091)
chr2 (273-322)||(17626971-17627019)
chr2 (295-373)||(18134338-18134418)
chr2 (328-507)||(30638449-30638628)
chr2 (302-390)||(36022464-36022551)
chr2 (22-68)||(12989326-12989372)
chr2 (315-372)||(29137922-29137979)
[»] scaffold0023 (1 HSPs)
scaffold0023 (197-413)||(95705-95921)
[»] scaffold0054 (1 HSPs)
scaffold0054 (274-625)||(68774-69116)
[»] chr3 (30 HSPs)
chr3 (194-410)||(9800977-9801191)
chr3 (196-631)||(17143643-17144078)
chr3 (259-390)||(30606931-30607062)
chr3 (271-390)||(16704405-16704524)
chr3 (271-418)||(431285-431432)
chr3 (275-390)||(21342260-21342375)
chr3 (271-435)||(28723743-28723907)
chr3 (281-365)||(28715467-28715551)
chr3 (281-386)||(2311813-2311918)
chr3 (281-406)||(20622393-20622520)
chr3 (492-631)||(13932709-13932848)
chr3 (158-418)||(1770800-1771059)
chr3 (281-390)||(8122894-8123002)
chr3 (275-411)||(12516167-12516303)
chr3 (271-423)||(14860068-14860220)
chr3 (292-418)||(17485614-17485740)
chr3 (281-372)||(12731540-12731631)
chr3 (302-373)||(13085073-13085144)
chr3 (347-423)||(21649383-21649459)
chr3 (299-390)||(6109650-6109741)
chr3 (295-369)||(13932968-13933042)
chr3 (272-369)||(25495962-25496059)
chr3 (92-167)||(20622634-20622710)
chr3 (271-310)||(20118946-20118985)
chr3 (316-383)||(21652652-21652719)
chr3 (315-369)||(9781519-9781573)
chr3 (274-310)||(12108502-12108538)
chr3 (499-539)||(17396589-17396629)
chr3 (24-68)||(24734840-24734884)
chr3 (24-68)||(41451896-41451940)
[»] scaffold0002 (2 HSPs)
scaffold0002 (272-582)||(379527-379837)
scaffold0002 (271-435)||(120980-121144)
[»] chr8 (27 HSPs)
chr8 (273-388)||(30477646-30477761)
chr8 (195-447)||(18322889-18323141)
chr8 (226-409)||(26916822-26917005)
chr8 (295-496)||(24507355-24507555)
chr8 (296-386)||(6928084-6928174)
chr8 (271-427)||(3459453-3459608)
chr8 (212-367)||(17698195-17698350)
chr8 (274-389)||(13754762-13754877)
chr8 (282-385)||(21416746-21416849)
chr8 (194-410)||(5859798-5860014)
chr8 (281-423)||(17927683-17927825)
chr8 (226-438)||(23269201-23269401)
chr8 (281-423)||(15058005-15058147)
chr8 (193-368)||(13765014-13765189)
chr8 (482-632)||(13754540-13754690)
chr8 (274-410)||(24576555-24576691)
chr8 (336-438)||(1909742-1909844)
chr8 (301-366)||(24070879-24070945)
chr8 (272-333)||(23497133-23497194)
chr8 (469-622)||(26917044-26917196)
chr8 (272-335)||(17319602-17319665)
chr8 (482-622)||(13764122-13764263)
chr8 (271-414)||(4565362-4565505)
chr8 (307-338)||(7220617-7220648)
chr8 (504-539)||(14667040-14667075)
chr8 (328-361)||(7220553-7220586)
chr8 (24-68)||(16983529-16983573)
[»] scaffold0360 (1 HSPs)
scaffold0360 (198-413)||(13902-14117)
[»] scaffold0291 (2 HSPs)
scaffold0291 (275-387)||(15403-15515)
scaffold0291 (296-592)||(8571-8866)
[»] scaffold0140 (1 HSPs)
scaffold0140 (272-390)||(6301-6419)
[»] scaffold0505 (2 HSPs)
scaffold0505 (276-412)||(7866-8002)
scaffold0505 (482-625)||(7674-7817)
[»] scaffold0294 (1 HSPs)
scaffold0294 (271-385)||(211-326)
[»] scaffold0057 (1 HSPs)
scaffold0057 (271-417)||(73771-73917)
[»] scaffold0205 (2 HSPs)
scaffold0205 (281-410)||(22869-22998)
scaffold0205 (271-423)||(10884-11036)
[»] scaffold0103 (1 HSPs)
scaffold0103 (273-390)||(40799-40916)
[»] scaffold0174 (2 HSPs)
scaffold0174 (310-423)||(29286-29397)
scaffold0174 (271-315)||(24826-24870)
[»] scaffold0074 (2 HSPs)
scaffold0074 (294-390)||(35256-35353)
scaffold0074 (514-568)||(35078-35132)
[»] scaffold0328 (1 HSPs)
scaffold0328 (500-631)||(10431-10562)
[»] scaffold0005 (1 HSPs)
scaffold0005 (276-390)||(215275-215389)
[»] scaffold0013 (1 HSPs)
scaffold0013 (274-411)||(4396-4533)
[»] scaffold0380 (1 HSPs)
scaffold0380 (272-372)||(6830-6930)
[»] scaffold0263 (1 HSPs)
scaffold0263 (315-413)||(20510-20608)
[»] scaffold0092 (1 HSPs)
scaffold0092 (271-389)||(21587-21705)
[»] scaffold0464 (1 HSPs)
scaffold0464 (281-411)||(11498-11624)
[»] scaffold0101 (1 HSPs)
scaffold0101 (275-335)||(10704-10764)
[»] scaffold0068 (2 HSPs)
scaffold0068 (499-563)||(49120-49184)
scaffold0068 (499-563)||(62568-62632)
[»] scaffold0096 (1 HSPs)
scaffold0096 (274-415)||(42227-42367)
[»] scaffold0479 (1 HSPs)
scaffold0479 (275-353)||(5078-5156)
[»] scaffold0022 (1 HSPs)
scaffold0022 (273-411)||(69197-69333)


Alignment Details
Target: chr6 (Bit Score: 616; Significance: 0; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 616; E-Value: 0
Query Start/End: Original strand, 11 - 650
Target Start/End: Complemental strand, 19305846 - 19305207
Alignment:
Q  11 gaacctgtgctagtgctagcaacactatcttttaaacactatctctaatcctcactcttgttctagaccagttagaatatcaatcacacgttgacatgta 110  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19305846 gaacccgtgctagtgctagcaacactctcttttaaacactatctctaatcctcactcttgttctagaccagttagaatatcaatcacacgttgacatgta 19305747  T
Q  111 gcctaattacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgccgcgaggatcaccctaca 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  19305746 gcctaattacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcttgcccgccgcgaggatcaccctaca 19305647  T
Q  211 cgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19305646 cgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggta 19305547  T
Q  311 tgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccac 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19305546 tgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccac 19305447  T
Q  411 cgcaaagattcattaccactgtaccagaaaccatcacgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatcattt 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19305446 cgcaaagattcattaccactgtaccagaaaccatcacgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatcattt 19305347  T
Q  511 gacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgccgtaaccgttttttg 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19305346 gacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgccgtaaccgttttttg 19305247  T
Q  611 ttacacgttcctccatcgcaacagttcacaggttctgctc 650  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  19305246 ttacacgttcctccatcgcaacagttcacagttactgctc 19305207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 274 - 568
Target Start/End: Complemental strand, 20148434 - 20148142
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||| |    
T  20148434 gcctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttct--acactctttctcaattccattactaacttgagcgat 20148337  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgcca 472  Q
      |||||||||||| ||  | | || ||||||||||||||||||| || | | | |  ||||||||||  ||| |||||||||||||| | ||| |||||    
T  20148336 ggagtgctaacgtgtctgcatgcacttttcgttccaccgcaaagactcgtcagccccataccagaaactgtcatcgtcacaccggagc-actttccgcca 20148238  T
Q  473 ccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
     |||||| ||||||||||||||||| ||||||||||||| | | |||||||||  ||| || ||||||  ||||||| | ||||||||||| ||||    
T  20148237 tcattgccactcatccatcctcactggacatatcatttggcacaagaaggaggtaatcttttgctaacctccacggtcttacaatcctccaccgta 20148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 274 - 568
Target Start/End: Original strand, 22184394 - 22184686
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||| |    
T  22184394 gcctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttct--acactctttctcaattccattactaacttgagcgat 22184491  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgcca 472  Q
      |||||||||||| ||  | | || ||||||||||||||||||| || | | | |  ||||||||||  ||| |||||||||||||| | ||| |||||    
T  22184492 ggagtgctaacgtgtctgcatgcacttttcgttccaccgcaaagactcgtcagccccataccagaaactgtcatcgtcacaccggagc-actttccgcca 22184590  T
Q  473 ccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
     |||||| ||||||||||||||||| ||||||||||||| | | |||||||||  ||| || ||||||  ||||||| | ||||||||||| ||||    
T  22184591 tcattgccactcatccatcctcactggacatatcatttggcacaagaaggaggtaatcttttgctaacctccacggtcttacaatcctccaccgta 22184686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 128 - 507
Target Start/End: Complemental strand, 33597128 - 33596747
Alignment:
Q  128 taaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgccgcg--aggatcaccctacacgtgtcctctaatct 225  Q
    ||||||||||| ||||| ||||||||||| ||||||||| ||| |||||| |  || |||||  |||||  ||| ||| |||||| ||||||||||| |     
T  33597128 taaggctccgcgcctgagggaacacgccaactcaagtgctccgtgccacacatgagtgcgcctcccgcgcgagggtcatcctacatgtgtcctctaaccg 33597029  T
Q  226 tccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac 325  Q
     ||||||||| || ||||| ||  ||       |||| || ||  ||||||||| |||| |||| ||||||||| ||||||||||||||||  |||||||    
T  33597028 cccctaatcatacgccgcataatccggtgacaattatgctcaaagcgcgcctatataagagtgaacttgcttcatcctcaaggtatgattccattttcac 33596929  T
Q  326 aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcatta 425  Q
    ||||||||||||||||| || || |||| ||||||||| |||||||||  |||| ||| ||||||  ||| ||||||||||||||||||| ||||| |      
T  33596928 aacactttctacacactttttcttagtttcattactgagttgagcgttagagtgttaatgtgcctgcaggtacctttcgttccaccgcaaggattcttcg 33596829  T
Q  426 ccactgtaccagaaaccatca-cgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatca 507  Q
    || | ||| ||||| || ||| |||||||| ||||| ||||| ||||||  |||| ||||||||||||||||| |||| ||||    
T  33596828 ccgccgtatcagaagccttcaccgtcacactggagc-attttccgccacggttgccactcatccatcctcactggacaaatca 33596747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 194 - 412
Target Start/End: Complemental strand, 18147505 - 18147287
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacctt 293  Q
    |||||||||||| ||||| |||||||||| | ||||||||||||| | ||||||| |  | | | |||  |  ||  ||| ||||| |||||||||| ||    
T  18147505 gcgaggatcaccttacacatgtcctctaaccgtccctaatcacacgctgcaaaacccagaggcggttaatcccaatgcgcacctatataagggtgacatt 18147406  T
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctcta 393  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||  |||| |||||| |||  |    
T  18147405 gcttcaccctaaaggtatgagtcacttttcacaacactttctacacactctttctcggttccattagtgacttgagcgttggagtgttaacgttcctaca 18147306  T
Q  394 ggaacctttcgttccaccg 412  Q
    || |||||||||| |||||    
T  18147305 ggcacctttcgtttcaccg 18147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 387
Target Start/End: Complemental strand, 30681191 - 30680998
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacctt 293  Q
    ||||||||||   |||||||||| | ||| |||  |||||||||| |||||||||||| | | | |||| || ||| ||||||||| ||| |||||| ||    
T  30681191 gcgaggatcattgtacacgtgtcttttaaccttttctaatcacacgccgcaaaactcggaggcggttattctcaacgcgcgcctatctaaaggtgacatt 30681092  T
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtg 387  Q
    |||||| ||||||||||||||||||||||||||| || |||||||| |||||  |||||| |||||||||||||||||||  ||||||||||||    
T  30681091 gcttcatcctcaaggtatgattcacttttcacaatacattctacacgctctttatcagtttcattactgacttgagcgttggagtgctaacgtg 30680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 92 - 383
Target Start/End: Original strand, 689646 - 689938
Alignment:
Q  92 aatcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgccc 190  Q
    |||||||||| |||| || |||||| |||||||||  |||| |||||| ||||| || ||| | |  ||||||||||||| |||||| |  ||| || ||    
T  689646 aatcacacgtcgacacgttgcctaagttacaccgccttaagactccgcacctgagggtacatgtctgctcaagtgcaccgtgccacacaagagcacgtcc 689745  T
Q  191 gc-cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtga 289  Q
     | |||||||| |||||| ||||| ||||||||   ||| ||||||||| |||||||||||| |   | ||||  | |||  |||||||| |||||||||    
T  689746 ccgcgcgaggaccacccttcacgtatcctctaactgtccttaatcacacgccgcaaaactcggagacgattatgatcaacgtgcgcctatataagggtga 689845  T
Q  290 ccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaa 383  Q
    ||||| | || |||||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||  ||||||||    
T  689846 ccttgat-cagcctcaaggtacgattcacttttcacaacactttatacacacactttctcagttccattactgacttgagcattgcagtgctaa 689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 281 - 438
Target Start/End: Original strand, 9277280 - 9277436
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||||  | |||||||||||||||||||||||||||| | | ||||||| |||| |||||| |||||||||| ||||||||||||||||  |||||    
T  9277280 taagggtgagttagcttcaccctcaaggtatgattcacttt-ctccacactttttacatactctttctcagttccaatactgacttgagcgttatagtgc 9277378  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccaga 438  Q
    ||||||| ||  |||||||||||||||||||||||||| || | ||||||||| ||||    
T  9277379 taacgtgtctgcaggaacctttcgttccaccgcaaagactcctcaccactgtagcaga 9277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 309 - 592
Target Start/End: Complemental strand, 14080567 - 14080286
Alignment:
Q  309 tatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttcc 408  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||   |||||||| |||||| |||| ||||||||| ||    
T  14080567 tatgattcacttttcacaacacttactacacactctttctcagtt-cattactaacttgagcgtcagagtgctaatgtgcctgtaggcacctttcgtccc 14080469  T
Q  409 accgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatca 507  Q
    ||| |||  |||| | ||| | ||||| |||||| ||| | ||||| || ||| | ||| |||||||||||  ||||||||||||||||| || | ||||    
T  14080468 accacaagaattcgtcaccgccgtaccggaaaccgtcaccatcacatcgaagc-actttccgccaccattgtcactcatccatcctcactggatagatca 14080370  T
Q  508 tttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctc 592  Q
    |||| | ||||||||| | ||| ||||||||||  |||| || |||| |||||||| ||||   |||||| |||| |||||||||    
T  14080369 tttggcactagaagga-gtgattgttcgctaaccgccacagtataacgatcctccaccgtaactgttttcagttacacgttcctc 14080286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 194 - 418
Target Start/End: Complemental strand, 11087701 - 11087477
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaa-agagtttatccttaactcgcgcctatttaagggtgacct 292  Q
    ||||||||||||||||||||||||||||| | ||| |||| |||| ||||| ||  || | | |||| || || ||| ||| ||||| ||||||||| ||    
T  11087701 gcgaggatcaccctacacgtgtcctctaaccgtccttaattacacgccgcataatccggagacagtt-atgctcaacgcgcacctatataagggtgaact 11087603  T
Q  293 tgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctct 392  Q
    || |||| ||||||||||||||||||||||||||||||  |||||| |||||| ||||||| |||||||||||| || ||  ||||||||| ||| ||      
T  11087602 tgtttcatcctcaaggtatgattcacttttcacaacacaatctacatactctttctcagttacattactgacttaagggtcaaagtgctaatgtgtctgc 11087503  T
Q  393 aggaacctttcgttccaccgcaaaga 418  Q
    ||  | ||||||||||||||| ||||    
T  11087502 agacagctttcgttccaccgcgaaga 11087477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 195 - 390
Target Start/End: Complemental strand, 22572242 - 22572048
Alignment:
Q  195 cgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttg 294  Q
    |||||||||||| ||||||||||||||| | |||||||||| ||  |||| |||  | |   | |||| || ||| |||||| || ||| ||||| ||||    
T  22572242 cgaggatcaccccacacgtgtcctctaaccgtccctaatcatacttcgcataacctggagacggttatgctcaacgcgcgccaatataaaggtgaacttg 22572143  T
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 390  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||  ||| ||||||||||||| |||||||   |||||||||||||||    
T  22572142 cttcaccctcaagatatgattcactttacacaacaccttctacacactctt-ttcaattccattactgacatgagcgtcatagtgctaacgtgcct 22572048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 31295506 - 31295644
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| ||||||||| |||||||||||||| |||||    ||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  31295506 cgcctatgtaagggtgaacttgcttcaccctcgaggtacatatcacttttcacaacacttcatacacactctttctcagtttcattactgacttgagcgt 31295605  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
      |||||||||| |||||  ||| | |||||||||||||    
T  31295606 cgaagtgctaacatgcctgcaggcaactttcgttccacc 31295644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 3404855 - 3404926
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgactt 366  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3404855 cttcaccctcaaggtatgattcatttttcacaacactttctacacactctttctcagttccattactgactt 3404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 34187397 - 34187259
Alignment:
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctcta 393  Q
    |||||||||||||||||  ||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| |||   ||||||||||| ||  |    
T  34187397 gcttcaccctcaaggtacaattcacttt-caccacactttttacacactctttctcagttccattactgacttgagtgttggtgtgctaacgtgtctgca 34187299  T
Q  394 ggaacctttcgttccaccgcaaagattcattaccactgta 433  Q
    |  |||||||||||||||||||||| | || |||||||||    
T  34187298 gacacctttcgttccaccgcaaagacttatcaccactgta 34187259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 272 - 418
Target Start/End: Original strand, 9291990 - 9292135
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| ||| |||||  | |||||||||||||||||||||||||||||| || |||||| |||| ||| || |||||||||| ||||||||||||||    
T  9291990 gcgcctatataaaggtgagttagcttcaccctcaaggtatgattcacttttccca-cactttttacatactatttctcagttccaatactgacttgagcg 9292088  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||   |||||||||||| |  ||| |||||||||||||||| |||||    
T  9292089 ttagcgtgctaacgtgcttgcaggcacctttcgttccaccgtaaaga 9292135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 15480314 - 15480408
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    ||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||    
T  15480314 cctatataagggtgacttagcttcactctcaaggtatgattcacttttcacaacactttctacacactttttctcagtttcattattgacttgag 15480408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 16131090 - 16130993
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttga 368  Q
    ||||||||| ||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  16131090 cgcgcctatataagggtaaacttgtttcaccctcaaggtatgattcacgtttcacaacactttctgtacactctttatcagttccattactgacttga 16130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 267 - 427
Target Start/End: Complemental strand, 34064321 - 34064161
Alignment:
Q  267 aactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgactt 366  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||  ||||||||||| || |||| ||||||||||||    
T  34064321 aactcgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttcttagtttcattactgactt 34064222  T
Q  367 gagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattacc 427  Q
    || |||   |||| ||||||||||  |   ||||||||||| ||||  |||| ||||||||    
T  34064221 gaacgtcatagtgttaacgtgcctgcacacacctttcgttctaccgtgaagactcattacc 34064161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 17380217 - 17380123
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttg 367  Q
    ||||||| ||||||||||||||| ||| ||| |||||| |||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  17380217 cgcctatataagggtgaccttgcgtcaacctgaaggtaagattcacttttcacaacactttattcacactctttctcagttctattactgacttg 17380123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 271 - 373
Target Start/End: Original strand, 34572963 - 34573065
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| |||||||||| |  |||||||||||| |||||||||||||||||| |||||||||||||||| || || ||||| |||||| ||||||||    
T  34572963 cgcgcctatataagggtgacttaacttcaccctcaatgtatgattcacttttcaccacactttctacacactttttcttagttctattactaacttgagc 34573062  T
Q  371 gtt 373  Q
    |||    
T  34573063 gtt 34573065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 317 - 625
Target Start/End: Original strand, 19331695 - 19332003
Alignment:
Q  317 acttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaa 416  Q
    ||||| |||||||||||||| || ||||| || ||||||||||||||||| |||||   ||| ||||||| |||  | | ||||||||||||||||| ||    
T  19331695 actttacacaacactttctatactctctttcttagttccattactgacttaagcgtcggagtactaacgtacctgcaagcacctttcgttccaccgcgaa 19331794  T
Q  417 gattcattaccactgtaccagaaaccatcac-gtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatcatttgacgc 515  Q
    || || | ||  |  |||  |||||  | || |||||||| ||||| |||   |||||| |||| |||||| |||||||||  || | |  ||||| |||    
T  19331795 gactcgtcacagccatacaggaaactgtaactgtcacaccagagcactttct-gccaccgttgcaactcattcatcctcaccggagaaaaaatttggcgc 19331893  T
Q  516 tagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgccgtaaccgttttttgttaca 615  Q
    ||||| ||||||||||||| |||||  ||||||| ||||||||||||| ||||  ||||||| ||||  || ||||| ||| ||||| ||||  ||||||    
T  19331894 tagaatgaggggatcgttcactaacctccacggtctaacaatcctccaccgtaaccgttttcagttacgcgctcctccgccttaaccattttcagttaca 19331993  T
Q  616 cgttcctcca 625  Q
    ||||||||||    
T  19331994 cgttcctcca 19332003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 9403290 - 9403175
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||||| ||||||||||||||||||||    ||||||| ||||||||||  ||||||||||| ||||||||||||| ||||||||||||      
T  9403290 cctatataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacacactctttctcagttccattattgacttgagcgtcg 9403191  T
Q  375 aagtgctaacgtgcct 390  Q
     ||| |||||||||||    
T  9403190 gagttctaacgtgcct 9403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 390
Target Start/End: Original strand, 19730564 - 19730679
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||||| ||||||||||||||||||||    ||||||| ||| ||||||  ||||||||||| ||||||||||||| |||||||||||||     
T  19730564 cctatataagggtgaacttgcttcaccctcaaggtacacatcactttacacgacacttcttacacactctttctcagttccattattgacttgagcgttg 19730663  T
Q  375 aagtgctaacgtgcct 390  Q
     ||||||||| |||||    
T  19730664 gagtgctaacatgcct 19730679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 12449552 - 12449692
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||| | |||| |||||||||||||||    ||||||| ||||||||||  |||||||||||  |||| ||||||||||||||||||    
T  12449552 cgcgcctatataagggtaaacttgattcaccctcaaggtacacatcactttccacaacacttcttacacactctttttcagctccattactgacttgagc 12449651  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    ||   |||||||||||||||  ||  ||||||||| |||||    
T  12449652 gtcagagtgctaacgtgcctacagacacctttcgtcccacc 12449692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 31423806 - 31423894
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccatta 359  Q
    ||||||||| ||||||||  |||||||||||||||||  ||||||||||| ||||||||||||||||| |||||| ||||||| |||||    
T  31423806 cgcgcctatataagggtgcacttgcttcaccctcaagacatgattcacttctcacaacactttctacatactctttctcagtttcatta 31423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 4251029 - 4251132
Alignment:
Q  287 tgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgt 386  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||| |||| || |||||||||||||| ||||  |||| || |||    
T  4251029 tgactttgcttcaccctcaagatatgatttacttttcacaacactctctccacactctttctcattttcattactgacttgaacgttggagtgttatcgt 4251128  T
Q  387 gcct 390  Q
    ||||    
T  4251129 gcct 4251132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 271 - 410
Target Start/End: Original strand, 12424283 - 12424422
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||| ||||||     |||||||||||||||||| || ||  |||  ||||||||||||||||||||||      
T  12424283 cgcgcctatataagggtgaacttgcttcacccttaaggtacacaacacttttcacaacactttttagactttctctctcagttccattactgacttgatt 12424382  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccac 410  Q
    ||   |||||||||||||||  ||| ||||||||||||||    
T  12424383 gtcgtagtgctaacgtgcctgcaggcacctttcgttccac 12424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 274 - 384
Target Start/End: Complemental strand, 14268551 - 14268440
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccc-tcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    |||||| |||||||||| | ||||||||| ||| | |||||||||||||||| ||||||||||||||||| |  || ||||||||||||||||| |||||    
T  14268551 gcctatataagggtgacttagcttcacccctcacgatatgattcacttttcaaaacactttctacacactatgtcttagttccattactgacttcagcgt 14268452  T
Q  373 ttaagtgctaac 384  Q
    |  |||||||||    
T  14268451 tggagtgctaac 14268440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 10115659 - 10115753
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||| ||||| |||| | ||||||||||| |||||||||||||||||||||| ||||| ||| | ||||| ||||||| ||||||||||||||||    
T  10115659 ctatataaggctgacttagcttcaccctcgaggtatgattcacttttcacaaaactttttactcgctctttctcagtttcattactgacttgagc 10115753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 19277045 - 19277135
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattact 361  Q
    ||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||  ||||||||||| |||| ||||||||||    
T  19277045 cgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcatttccattact 19277135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 365
Target Start/End: Complemental strand, 18566779 - 18566685
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgact 365  Q
    ||||||||| ||  ||||| ||||| ||||||||||||||   ||||||||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  18566779 cgcgcctatatagaggtgaacttgcctcaccctcaaggtagacttcactttttacaacgctttctacacaatctttctcagttccattactgact 18566685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 12203617 - 12203681
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactctt 345  Q
    |||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  12203617 taagggtgacttaacttcaccctcaaagtatgattcacttttcacaacactttctacatactctt 12203681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 27860917 - 27861057
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||||||||  |||||||| |||||||||||||||| |||    ||||||||||||||||||  ||||| ||||   ||||||||||||||||||||||     
T  27860917 cgcgcctataaaagggtgaacttgcttcaccctcaaagtacacatcacttttcacaacacttcttacactctctctttcagttccattactgacttgagt 27861016  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    |||  ||| ||||| |||||  ||  |||||| ||||||||    
T  27861017 gttagagtactaacatgcctgcagacaccttttgttccacc 27861057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 423
Target Start/End: Original strand, 22497280 - 22497419
Alignment:
Q  284 gggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaa 383  Q
    |||||| ||||||||||||||||||||     |||||||||||||||||| || || ||||   || ||||||||||||||||||||||   ||||||||    
T  22497280 gggtgaacttgcttcaccctcaaggtacacaacacttttcacaacactttttatactctctctttctgttccattactgacttgagcgtcggagtgctaa 22497379  T
Q  384 cgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    |||| ||  | | ||||||||||||| ||| |||| ||||    
T  22497380 cgtgtctgcaagcacctttcgttccatcgcgaagactcat 22497419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 25008398 - 25008477
Alignment:
Q  309 tatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcc 389  Q
    ||||||||||||| | || |||||| ||||||||||| |||| ||||||||||||||||||||||  |||| |||||||||    
T  25008398 tatgattcactttaccca-cactttttacacactctttctcaattccattactgacttgagcgttggagtgttaacgtgcc 25008477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 27772537 - 27772584
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttt 321  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  27772537 gcctatataagggtgaccttgcttcaccttcaaggtatgattcacttt 27772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 10926886 - 10927010
Alignment:
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactctta-ctcagttccattactgacttgagcgtttaagtgctaacgtgcctct 392  Q
    ||||||||| |||| ||| ||||||||||| || |||||| ||| |||||||  |||||||||| |||||| ||| ||||| | ||||||||||| ||      
T  10926886 gcttcacccccaagatataattcacttttccca-cactttttacgcactcttttctcagttccaatactgaattgggcgttgaggtgctaacgtgtctgc 10926984  T
Q  393 aggaacctttcgttccaccgcaaaga 418  Q
    | |||||||||||  |||||||||||    
T  10926985 atgaacctttcgtctcaccgcaaaga 10927010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 423
Target Start/End: Complemental strand, 16343698 - 16343549
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| |||| |||| ||||||||||  |||| |||    ||||||| ||||||||||  |||||  |||  ||||||||||||||||||||||| |||    
T  16343698 gcctatataagtgtgaacttgcttcacattcaaagtacacatcactttccacaacacttcttacactttctctctcagttccattactgacttgagtgtt 16343599  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
      |||||||||||||||  ||| ||| |||| ||||| || |||| ||||    
T  16343598 ggagtgctaacgtgcctgcaggcacccttcgctccactgcgaagactcat 16343549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 632
Target Start/End: Complemental strand, 18566551 - 18566418
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgccgt 598  Q
    ||||||||||||| ||||||||| |||||||||||||||||   |||| ||  || ||||||||   ||| | |||||||||||  || |||||| || |    
T  18566551 gacatatcatttggcgctagaagaaggggatcgttcgctaaacgccacagtccaataatcctcccctgtaattgttttctgttacgcgctcctctaccat 18566452  T
Q  599 aaccgttttttgttacacgttcctccatcgcaac 632  Q
    |||  |||  ||||||||||||||| ||| ||||    
T  18566451 aacattttcctgttacacgttcctctatcccaac 18566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 631
Target Start/End: Original strand, 14184742 - 14184877
Alignment:
Q  498 agacatatcatttgacgctagaaggaggggatcg-ttcgctaa-ctaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgc 595  Q
    ||||| |||||||| |||||||||||||||  || |||||||| |  ||||||| |||| |||||||| ||||   |||||| ||||  || ||| | ||    
T  14184742 agacacatcatttggcgctagaaggagggggacggttcgctaaaccgccacggtctaacgatcctccaccgtaacagttttcagttacgcgctccaccgc 14184841  T
Q  596 cgtaaccgttttttgttacacgttcctccatcgcaa 631  Q
    | |||| |||||| |||||||||||||||| |||||    
T  14184842 cataactgtttttggttacacgttcctccaccgcaa 14184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 388
Target Start/End: Original strand, 12487970 - 12488082
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| ||||||||| ||||  |||||||||| |||    |||||||||||||||||   ||||||||||   | ||||| |||| |||||| ||||||      
T  12487970 ctatataagggtgaacttgtatcaccctcaatgtacacatcacttttcacaacactacttacacactctattttagttctattattgacttcagcgttag 12488069  T
Q  376 agtgctaacgtgc 388  Q
    |||||||||||||    
T  12488070 agtgctaacgtgc 12488082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 539
Target Start/End: Original strand, 13823574 - 13823614
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaa 539  Q
    ||||||||||||| |||||| ||||||||||||||| ||||    
T  13823574 gacatatcatttggcgctagtaggaggggatcgttcactaa 13823614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 22692210 - 22692162
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttc 323  Q
    ||||| ||| |||||| | |||||||||||||| |||||||||||||||    
T  22692210 cctatataaaggtgacttagcttcaccctcaagttatgattcacttttc 22692162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 91 - 420
Target Start/End: Original strand, 26762698 - 26763029
Alignment:
Q  91 caatcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcc 189  Q
    |||||||||||||||| || | |||| |||||||||  |||||||| ||  |||| ||||||||||| |||||||||||| |||||||  ||||| ||||    
T  26762698 caatcacacgttgacacgtggtctaacttacaccgccttaaggctcagcctctgagggaacacgccaactcaagtgcaccacgccacaccgtagcacgcc 26762797  T
Q  190 cgc-cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtg 288  Q
    |   ||||||||||||| |||| ||||||||||| | ||||||||||||| || |||||| || | | | |||||   ||| ||||||||| || |||||    
T  26762798 cctgcgcgaggatcaccatacaagtgtcctctaaccgtccctaatcacacgccccaaaacccggaggtggttatcaacaacacgcgcctatatatgggtg 26762897  T
Q  289 accttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgc 388  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||| |||||||||||||||||  |||||||||||||    
T  26762898 tccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactatttatgagttcctttactgacttgagcgttggagtgctaacgtgc 26762997  T
Q  389 ctctaggaacctttcgttccaccgcaaagatt 420  Q
    ||  | |||||||||| |||||||||| ||||    
T  26762998 ctgcaagaacctttcgctccaccgcaaggatt 26763029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 276 - 412
Target Start/End: Original strand, 9135335 - 9135471
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||      
T  9135335 ctatataagggtgaatttgcttcaccctcaaggtatgattcacttttcacaacagtttttacacactctttctcaattccattactgacttgagcgttag 9135434  T
Q  376 agtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    ||||||||||||||| || | ||||||||||||||||    
T  9135435 agtgctaacgtgcctatatgcacctttcgttccaccg 9135471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 195 - 388
Target Start/End: Complemental strand, 5863385 - 5863192
Alignment:
Q  195 cgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttg 294  Q
    ||||||||||  |||||||||||||||| | ||||||||||||  |||  |||| || | | | ||||    ||| |||||||||  ||||||||| |||    
T  5863385 cgaggatcacgttacacgtgtcctctaaccgtccctaatcacatgccgtgaaacccggaggcggttatttccaacgcgcgcctatacaagggtgacattg 5863286  T
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgc 388  Q
    || ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  5863285 ctccaccctcaaggtatgattcactttttacaacattttctacacactctttctcagttcgattactgacttgagcgtttgagtgctaacgtgc 5863192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 276 - 461
Target Start/End: Complemental strand, 39879505 - 39879318
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccc-tcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    |||| |||||||||| ||||||| ||| ||| || ||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||     
T  39879505 ctatataagggtgacattgcttcccccctcatggcatgattcactttttacaacactttttacacactctttctcagtttcattactgacttgagcgtta 39879406  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagca 461  Q
    ||||| ||||||| ||  ||| ||||||||||||||| | ||||||||| |  || ||| | |||||||||| |||||||||||||||    
T  39879405 aagtgttaacgtgtctgcaggcacctttcgttccaccacgaagattcatcattaccgtatcggaaaccatcaccgtcacaccggagca 39879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 29373568 - 29373400
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| || ||  ||||||||||||    
T  29373568 cgcgcctatatgagggtgacattgcttcaccctcaaggtatgattcaattttcacaacattttctacacactctttctcaattacacaactgacttgagc 29373469  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaa 439  Q
     ||  ||| ||||| |||||  | | |||||||||| ||||||||| | |||| ||||| |||||||||    
T  29373468 attggagtcctaacatgcctgcatgcacctttcgtttcaccgcaaaaactcatcaccaccgtaccagaa 29373400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 416
Target Start/End: Complemental strand, 7486657 - 7486522
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    ||||||||| ||| ||||||| | |||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||  |||||    
T  7486657 taagggtgaactttcttcacctttaagggatgattcacttttcacaacaccttctacacaatctttctcagttccattactgaattgagcgttggagtgc 7486558  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaa 416  Q
    ||||||||||  | | ||||||| ||||||||||||    
T  7486557 taacgtgcctgcatgcacctttcattccaccgcaaa 7486522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 271 - 412
Target Start/End: Original strand, 10287565 - 10287706
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||| | |||| | ||||||||||||||   ||||||||||||||||||  |||||||| || ||||| ||||||||||||||||||    
T  10287565 cgcgcctatataagggtaaacttgttacaccctcaaggtatctctcacttttcacaacacttcttacacactttttctcagatccattactgacttgagc 10287664  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    ||| | ||||||||||||||  |||||||||| |||||||||    
T  10287665 gttaaggtgctaacgtgcctgcaggaacctttggttccaccg 10287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 301 - 418
Target Start/End: Original strand, 9867938 - 9868055
Alignment:
Q  301 cctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacct 400  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||   ||||||||||| |||  | | ||||    
T  9867938 cctcaaggtatgattcacttttaacaacactttctacaaactcttcctcagttccattactgacttgagcgtcagagtgctaacgttcctgcatgcacct 9868037  T
Q  401 ttcgttccaccgcaaaga 418  Q
    ||||| ||||||| ||||    
T  9868038 ttcgtcccaccgcgaaga 9868055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 13292092 - 13292232
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||| ||||| ||||||||||||||||||||    ||||||||||||||||||  |||||||||||  |||||| ||||||||||||||||    
T  13292092 cgcgcctatataatggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttttcagtttcattactgacttgagc 13292191  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    |||  ||||||||||| |||  ||  ||||||| |||||||    
T  13292192 gttagagtgctaacgtacctgcagacacctttccttccacc 13292232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 282 - 412
Target Start/End: Complemental strand, 12644897 - 12644766
Alignment:
Q  282 aagggtgaccttgcttcaccctcaaggtatgattcacttttcac-aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||| |||||||||||||||| |||  ||||||||||||| ||||||||| ||||||| || |||||||||||||||||| |||||||   |||||    
T  12644897 aagggtgaacttgcttcaccctcaacgtacaattcacttttcaccaacactttccacacactttttctcagttccattactgacctgagcgtcggagtgc 12644798  T
Q  381 taacgtgcctctaggaacctttcgttccaccg 412  Q
    |||| |||||  | | ||||||||||||||||    
T  12644797 taacttgcctgcatgcacctttcgttccaccg 12644766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 461
Target Start/End: Original strand, 16987061 - 16987252
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||| | |||| |    ||||||||||||||||||  ||||||||||| |||| ||||||||||| ||||||     
T  16987061 cgcgcctatataagggtgaacttgcttcacctttaagggacacatcacttttcacaacacttcttacacactctttctcaattccattactggcttgagt 16987160  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagca 461  Q
    ||   ||||||||||||||   | | ||||||||||||||||| |||| ||||| || | ||||||||| || | | |||||||||||||||    
T  16987161 gtcagagtgctaacgtgcccgcatgcacctttcgttccaccgcgaagactcattgccgccgtaccagaagccgttagcgtcacaccggagca 16987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 423
Target Start/End: Complemental strand, 21161326 - 21161212
Alignment:
Q  308 gtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttc 407  Q
    |||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||  |||||||||||||||  | ||  |||||||||    
T  21161326 gtatgattcacttttcacaacactttctacacacactttcttagctccattactgacttgagcgttggagtgctaacgtgcctgca-gacactttcgttc 21161228  T
Q  408 caccgcaaagattcat 423  Q
    |||||| |||| ||||    
T  21161227 caccgcgaagactcat 21161212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 389
Target Start/End: Original strand, 43171928 - 43172114
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacctt 293  Q
    |||||||||||||| | ||||||||||||   | |||||||| |  ||||||||| || | |   |||| || ||  ||||||||| |||||||||  ||    
T  43171928 gcgaggatcaccctccccgtgtcctctaactgttcctaatcaaatgccgcaaaacccggaggcagttattctcaatccgcgcctatataagggtgaagtt 43172027  T
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcc 389  Q
    ||||||||||||| ||||||||||||||||||||||||         | ||| ||||||||||||| |||||||||| ||  ||||||||||||||    
T  43172028 gcttcaccctcaatgtatgattcacttttcacaacact---------cactttctcagttccattattgacttgagcattggagtgctaacgtgcc 43172114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 271 - 412
Target Start/End: Original strand, 5925444 - 5925585
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||  ||||||||| |||||||||||||||||| |     |||||||||| ||||||  || ||  |||  |||||||||||||||||||||| |    
T  5925444 cgcgcctacataagggtgaacttgcttcaccctcaaggaacacaacacttttcacgacacttcttagactttctctctcagttccattactgacttgatc 5925543  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    |||  |||||||||||||||  ||  ||||||||||||||||    
T  5925544 gttggagtgctaacgtgcctgcagacacctttcgttccaccg 5925585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 16203840 - 16203770
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactctt 345  Q
    ||||| |||||||||| || ||||||||| |||||||| ||||||||||| |||||||| |||||||||||    
T  16203840 cctatataagggtgacttttcttcacccttaaggtatggttcacttttcataacactttatacacactctt 16203770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 16204409 - 16204340
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactct 344  Q
    ||||| |||||||||  || ||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  16204409 cctatataagggtgaattttcttcacccttaaggtatggttcacttttcacaacactttatacacactct 16204340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 34854362 - 34854249
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| |||| ||||||||||  |||    ||||||||||||||| ||  ||||||||||| ||||||| ||||||| ||||||||||     
T  34854362 gcctatataagggtgaacttgtttcaccctcagagtacacatcacttttcacaacatttcttacacactctttctcagtttcattactaacttgagcgtc 34854263  T
Q  374 taagtgctaacgtg 387  Q
      ||||||||||||    
T  34854262 agagtgctaacgtg 34854249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 418
Target Start/End: Original strand, 9573400 - 9573542
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| |||||||||| | ||||||||  ||| ||||||||||  |||| || |||||  ||||||||||| |||||||||  || ||||||| |||||     
T  9573400 cctatataagggtgacttagcttcacctccaatgtatgattcatgtttccca-cacttcttacacactctttctcagttcccatattgacttgtgcgttg 9573498  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
     |||||||||||||||  ||| |||  | |||||||||||||||    
T  9573499 gagtgctaacgtgcctgcaggcaccccttgttccaccgcaaaga 9573542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 5928991 - 5929099
Alignment:
Q  282 aagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgct 381  Q
    ||||||||  ||||||||||| ||||| |    ||||||||||||||||||  ||||| ||||   |||||||||||||||||||||| |||  ||||||    
T  5928991 aagggtgaatttgcttcacccccaagggacacatcacttttcacaacacttcttacactctctctttcagttccattactgacttgagtgttggagtgct 5929090  T
Q  382 aacgtgcct 390  Q
    || ||||||    
T  5929091 aatgtgcct 5929099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 9573602 - 9573666
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctcca 563  Q
    ||||||||||||| |||||||||||||| ||||||||| |||| ||||| | |||| ||||||||    
T  9573602 gacatatcatttggcgctagaaggagggcatcgttcgcgaactgccacgatctaacgatcctcca 9573666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 12265097 - 12265156
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacacttt 333  Q
    |||||| ||||||||| ||||||| |||||||||||| |  |||||||||||||||||||    
T  12265097 gcctatataagggtgaacttgcttgaccctcaaggtacgcatcacttttcacaacacttt 12265156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 18774027 - 18773960
Alignment:
Q  347 ctcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    ||||||||||||||||| |||| |||  ||||||||||||||||  | | ||||||||||||||||||    
T  18774027 ctcagttccattactgatttgatcgtcgaagtgctaacgtgcctgcatgcacctttcgttccaccgca 18773960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 48374437 - 48374484
Alignment:
Q  21 tagtgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    |||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  48374437 tagtgctagcaacactctcttttgaacactctctctaatactcactct 48374484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 4781470 - 4781508
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  4781470 gcgcctatataagggtgaacttgcttcaccctcaaggta 4781508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 4813901 - 4813939
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  4813901 gcgcctatataagggtgaacttgcttcaccctcaaggta 4813939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 16204049 - 16203944
Alignment:
Q  69 tgttctagaccagttagaatatcaatcacacgttgacatgtagcctaa--ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgc 166  Q
    |||||| |||| |||| || |||||||  ||||||||| || ||||||  |||||||||  ||||||||||| |||||||||||||  || ||  |||||    
T  16204049 tgttctggaccggttaaaaaatcaatcctacgttgacacgtggcctaagcttacaccgccttaaggctccgcacctgaaggaacacaacaactttagtgc 16203950  T
Q  167 accgcg 172  Q
    ||||||    
T  16203949 accgcg 16203944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 16204491 - 16204445
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatc-ttccctaatcacac 238  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||    
T  16204491 cgcgaggatcaccctacacgtgtcctctaaccgctccctaatcacac 16204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 1979108 - 1979044
Alignment:
Q  347 ctcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    ||||||||||||||||||||||||||   ||| ||||||||| |  ||| |||||||||| ||||    
T  1979108 ctcagttccattactgacttgagcgtcagagtactaacgtgcttgcaggcacctttcgtttcacc 1979044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 16203920 - 16203876
Alignment:
Q  195 cgaggatcaccctacacgtgtcctctaatc-ttccctaatcacac 238  Q
    |||||||||||||||||||||||||||| |  |||||||||||||    
T  16203920 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacac 16203876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 27949452 - 27949408
Alignment:
Q  24 tgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  27949452 tgctagcaacactctcttttgaacactctctctaatactcactct 27949408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 3e-59; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 128 - 423
Target Start/End: Complemental strand, 12684051 - 12683755
Alignment:
Q  128 taaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgc-cgcgaggatcaccctacacgtgtcctctaatctt 226  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||| |  || |  ||| | || |||||||||| |||| ||||||||||    |    
T  12684051 taagggtccgctcctgaagaaacacgccagctcaagtgcaccgcgccacacaaaagtgtccccccgcgtgaggatcaccttacatgtgtcctctagctgt 12683952  T
Q  227 ccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcaca 326  Q
    || |||||| ||  |||| |||||| |   | |||| |||||  ||||||||  ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12683951 ccgtaatcatacgtcgcataactcggagacggttatgcttaatgcgcgcctagataagggtgaacttgcttcacccttaaggtatgattcacttttcaca 12683852  T
Q  327 acactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||  |||||||||||||||  ||| |||||||||||||||||||||| ||||    
T  12683851 acactttctacacactctttctcagtttcattactaacttgagcgttggagtgctaacgtgcctgcaggcacctttcgttccaccgcaaagactcat 12683755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 128 - 423
Target Start/End: Complemental strand, 29157366 - 29157072
Alignment:
Q  128 taaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgc-cgcgaggatcaccctacacgtgtcctctaatctt 226  Q
    |||||||||||  |||||||||||||||| ||||| |||||||||||||| || ||||||||  | || |||||||| |||||| ||||||||||| | |    
T  29157366 taaggctccgc--ctgaaggaacacgccagctcaaatgcaccgcgccacacaggagcgcgccaccgcgtgaggatcatcctacatgtgtcctctaaccgt 29157269  T
Q  227 ccctaatcacaccccgcaaaactcgaaaga-gtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac 325  Q
    |||||||||    ||||| ||| | | ||| | |||||||  || ||||||||| ||||||||| ||| ||||||| |||||||||| |||||||| |||    
T  29157268 ccctaatcattagccgcataaccc-agagacggttatcctctacgcgcgcctatataagggtgaacttacttcaccatcaaggtatggttcactttacac 29157170  T
Q  326 aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    ||||||| ||||||||| || ||||||||||||||| |||||||||||  ||||| |||||| ||  | | ||||||||||||||||||| |||||||    
T  29157169 aacacttactacacactttttctcagttccattactaacttgagcgttggagtgcaaacgtgtctgcatgcacctttcgttccaccgcaaggattcat 29157072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 271 - 390
Target Start/End: Complemental strand, 47253399 - 47253280
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  47253399 cgcgcctatataagggtgacttagcttcaccctcaaggtatgattcacttttcacaacactttttacacactctttctcagttccattactgacttgagc 47253300  T
Q  371 gtttaagtgctaacgtgcct 390  Q
    |||  ||||||||| |||||    
T  47253299 gttggagtgctaacatgcct 47253280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 193 - 372
Target Start/End: Complemental strand, 19643901 - 19643723
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaaga-gtttatccttaactcgcgcctatttaagggtgacc 291  Q
    ||||||||||||| || | ||||||||||  | ||||||||| ||| ||||| ||||| | ||| | ||||||| ||| | ||||||| ||||||||| |    
T  19643901 cgcgaggatcaccttatatgtgtcctctac-cgtccctaatctcacgccgcataactc-agagacggttatcctcaacgcacgcctatataagggtgaac 19643804  T
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  19643803 ttgtttcaccctcaaggtatgattcacttttcacaagactttctacacactctttctcagttccattactgacttaagcgt 19643723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 193 - 384
Target Start/End: Original strand, 2674465 - 2674652
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacct 292  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||||||||  || |   | |||| || ||| ||||| ||| ||||||||| ||    
T  2674465 cgcgaggatcaccctacacgtgtcctctaactgtccctaatcacacgccgcaaaatccggagacggttatgctcaacgcgcgcttatataagggtgaact 2674564  T
Q  293 tgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaac 384  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||    ||||||| ||||| ||||||| |||||  |||||||||    
T  2674565 tacttcatcctcaaggtatgattcacttttcacaacactttctacacact----ctcagttacattattgacttgtgcgttggagtgctaac 2674652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 271 - 405
Target Start/End: Complemental strand, 19809823 - 19809689
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| |||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  19809823 cgcgcctatgtaagggtgacttagtttcaccctcaaggtataattcacttttcacaacactttctacacactctttcttagtttcattactgacttgagc 19809724  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgt 405  Q
    |||  ||||||||| || ||  |||||||||||||    
T  19809723 gttggagtgctaacatgtctgcaggaacctttcgt 19809689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 274 - 418
Target Start/End: Original strand, 15514533 - 15514677
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| ||||||||||||||||||||    ||||||| ||||||||||  |||||||||||  ||||||||||||||||||||||||||    
T  15514533 gcctatataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacacactctttttcagttccattactgacttgagcgtt 15514632  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
      |||||||||||||||  ||| ||| ||||||||||||| ||||    
T  15514633 ggagtgctaacgtgcctacaggcacccttcgttccaccgcgaaga 15514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 5518662 - 5518546
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| |||||||||||||||||||| |  ||||||| ||||||||||  |||||| |||  |||||||| |||||||||||||||    
T  5518662 cgcgcctatataagggtgaacttgcttcaccctcaaggtacgcatcactttccacaacacttcttacacattctctctcagttcaattactgacttgagc 5518563  T
Q  371 gtttaagtgctaacgtg 387  Q
    ||| |||||||||||||    
T  5518562 gttgaagtgctaacgtg 5518546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 14003073 - 14003180
Alignment:
Q  311 tgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccac 410  Q
    ||||||| |||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||   |||||||||||  ||  ||||||||||||||||||    
T  14003073 tgattcatttttcataacactttccacaaactctttctcagttccattactgacttgagcgtcatagtgctaacgttgcttcaggaacctttcgttccac 14003172  T
Q  411 cgcaaaga 418  Q
    ||||||||    
T  14003173 cgcaaaga 14003180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 15742122 - 15742262
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| |||||||||  ||||||||  |||||||||    ||||||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  15742122 cgcgcctatataagggtgaatttgcttcagtctcaaggtacacatcacttttcacaacacttcttacacactttttctcagttccattactgacttgagc 15742221  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    ||   ||||||||||||||   ||| |||||||| ||||||    
T  15742222 gtaagagtgctaacgtgccagcaggcacctttcgctccacc 15742262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 423
Target Start/End: Complemental strand, 19818783 - 19818664
Alignment:
Q  303 tcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaaccttt 402  Q
    ||||||||| |||||||||||||||||||||||||||||||||  |  |||  | ||||||||||||||||  ||||||||| |  || |||||||||||    
T  19818783 tcaaggtataattcacttttcacaacactttctacacactcttgattggtttaagtactgacttgagcgttggagtgctaacatatctgtaggaaccttt 19818684  T
Q  403 cgttccaccgcaaagattcat 423  Q
    || |||||||| |||| ||||    
T  19818683 cg-tccaccgcgaagactcat 19818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 14601989 - 14602103
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| ||||| ||| ||||||||||||||||||||     |||||||||||||||||  ||||||||||   |||||| |||||||||||||||||||      
T  14601989 ctatataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcgttgg 14602088  T
Q  376 agtgctaacgtgcct 390  Q
    | |||||||||||||    
T  14602089 attgctaacgtgcct 14602103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 308 - 423
Target Start/End: Complemental strand, 10981950 - 10981836
Alignment:
Q  308 gtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttc 407  Q
    |||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||| |||  ||||| |||||  ||  ||| ||||||||| |    
T  10981950 gtatgattcacttttccca-cactttttacacactctttctcggttccattactgacttgagtgttggagtgccaacgttgctgcaggcacctttcgtcc 10981852  T
Q  408 caccgcaaagattcat 423  Q
    ||| || |||| ||||    
T  10981851 cactgcgaagactcat 10981836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 390
Target Start/End: Original strand, 16012441 - 16012559
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||| ||||| ||    |||||| ||||||  |||  ||||||||||  ||||||||||||||||||||||||    
T  16012441 cgcgcctatataagggtgaacttgcttcacc-tcaagatacatatcacttctcacaatgcttcttacacactctatctcagttccattactgacttgagc 16012539  T
Q  371 gtttaagtgctaacgtgcct 390  Q
    ||   |||| ||||||||||    
T  16012540 gtcggagtgttaacgtgcct 16012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 13171134 - 13171065
Alignment:
Q  338 acactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttc 407  Q
    |||||||| ||||||||||||||||||||||| |||  |||||||||||||||  | | |||||||||||    
T  13171134 acactcttgctcagttccattactgacttgagagttggagtgctaacgtgcctgcaagcacctttcgttc 13171065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 50151775 - 50151823
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttt 321  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  50151775 cgcctatataagggtgactttgcttcaccctcaaggtatgatttacttt 50151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 3642975 - 3643025
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttt 321  Q
    ||||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  3642975 cgcgcctacataagggtgaccttgattcaccctcaagatatgattcacttt 3643025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 13896448 - 13896594
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||| |||| ||||||||| ||| ||| ||||||||||||    ||||||| ||||||||||  || ||| |||   |||||||| |||||| || ||||    
T  13896448 cgcgtctatataagggtgaactttctttaccctcaaggtacacatcactttccacaacacttcttatacaatctctttcagttcccttactggctagagc 13896547  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaag 417  Q
    |||| |||| |||||||| |  ||| ||| ||||||||| |||||||    
T  13896548 gtttgagtgataacgtgcttgcaggcacccttcgttccagcgcaaag 13896594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 559
Target Start/End: Complemental strand, 15789969 - 15789915
Alignment:
Q  505 tcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcc 559  Q
    ||||||| ||||||||||| |||||||||||||||| ||||| || |||||||||    
T  15789969 tcatttggcgctagaaggaagggatcgttcgctaaccaccacagtctaacaatcc 15789915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 533
Target Start/End: Complemental strand, 18463695 - 18463660
Alignment:
Q  498 agacatatcatttgacgctagaaggaggggatcgtt 533  Q
    |||||||||||||| |||||||||||||||||||||    
T  18463695 agacatatcatttggcgctagaaggaggggatcgtt 18463660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 372
Target Start/End: Original strand, 26894693 - 26894791
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| |||| ||||| || ||| |||||||||||| |||||||||||| | ||||||| || |||||| | |||| ||||   ||||||||||||||    
T  26894693 cgcctatataagtgtgacatttcttaaccctcaaggtacgattcacttttctc-acactttttaaacactccttctcatttcctaaactgacttgagcgt 26894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 416
Target Start/End: Complemental strand, 17110819 - 17110675
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactctta-ctcagttccattactgacttgag 369  Q
    ||||||||| ||||||||| ||||||||||||||||| ||      ||||||| |||||||| ||| | ||| ||  |||| |||||||||||||||||     
T  17110819 cgcgcctatgtaagggtgaacttgcttcaccctcaagatacacaatacttttcgcaacactt-cta-agacttttctctcaattccattactgacttgat 17110722  T
Q  370 cgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaa 416  Q
    |||   ||||||||||||| |  ||| || |||||||||||||||||    
T  17110721 cgtcggagtgctaacgtgcttgcaggcacatttcgttccaccgcaaa 17110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 13171177 - 13171137
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttt 321  Q
    |||||||||| ||| |||||||||| |||||||||||||||    
T  13171177 taagggtgacattgattcaccctcacggtatgattcacttt 13171137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 40979050 - 40979102
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacacttt 333  Q
    |||||||||| |  ||||||||||||| || |||||||||||||| |||||||    
T  40979050 taagggtgacttaacttcaccctcaagatacgattcacttttcaccacacttt 40979102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 192 - 461
Target Start/End: Original strand, 26994496 - 26994766
Alignment:
Q  192 ccgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacc 291  Q
    |||||| ||| ||| |||| ||||||||||||| ||||||||||||| ||||||||||||||   | |||  || ||| ||||||||| |||||||||||    
T  26994496 ccgcgatgataaccttacatgtgtcctctaatcgtccctaatcacacgccgcaaaactcgaagacggttactctcaacgcgcgcctatataagggtgacc 26994595  T
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctc 391  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||   |||||||||||| ||     
T  26994596 ttgcttcacccccaaggtatgattcacttttcacaacaccttctaaacactctttctcaattccattactgacttgagcgtcggagtgctaacgtgtctg 26994695  T
Q  392 taggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagca 461  Q
     ||  |||||| || |||| |||| || || | ||||| |||||||||||||||| ||||||| |||||||    
T  26994696 aagacaccttttgtcccactgcaaggactcgtcaccaccgtaccagaaaccatcaccgtcacatcggagca 26994766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 22903205 - 22903052
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  22903205 taagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagcgttgaagtgc 22903106  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtac 434  Q
    |||| |||||     |||||||||||||||||| || | |||| ||||| ||||    
T  22903105 taacatgcctacgaaaacctttcgttccaccgcgaaaactcatcaccaccgtac 22903052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 193 - 409
Target Start/End: Original strand, 32418377 - 32418593
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaa-agagtttatccttaactcgcgcctatttaagggtgacc 291  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||| ||||| ||| || | | |||| | | ||||| | || ||||  |||||||| |    
T  32418377 cgcgaggatcaccctacacgtgtcccctaaccatccctaatcacacgccgcataacccggagacagttaagc-ttaacgcacgtctatacaagggtgaac 32418475  T
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctc 391  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||| | ||||||||||||   |||| | ||||||||     
T  32418476 ttgcttcatcctcaaggtatgattcactcttcacaacactctctacacactctttctctgttccatcagtgacttgagcgtcagagtgttgacgtgcctg 32418575  T
Q  392 taggaacctttcgttcca 409  Q
     |||  ||||||||||||    
T  32418576 caggctcctttcgttcca 32418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 271 - 418
Target Start/End: Complemental strand, 25537527 - 25537380
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||| |||||||||||||||||   ||||||||||||||||||  |||||| |||| ||||||||||||||   |||||||    
T  25537527 cgcgcctatataagggtgaactttcttcaccctcaaggtatacatcacttttcacaacacttcatacacaatctttctcagttccattacaatcttgagc 25537428  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    |||  ||||||||||||| |  ||| ||||||||||||||||| ||||    
T  25537427 gttggagtgctaacgtgcttgcaggcacctttcgttccaccgcgaaga 25537380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 27083207 - 27083322
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||||||||  ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||||||||     
T  27083207 cgcgcctatgcaagggtgacttaacttcaccctcaaggtatgattcacttttcacaacactttctacacactctttcacagtttc-ttactgacttgagt 27083305  T
Q  371 gtttaagtgctaacgtg 387  Q
    |||  ||||||||||||    
T  27083306 gttggagtgctaacgtg 27083322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 20025405 - 20025312
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgac 364  Q
    ||||||| | |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||    
T  20025405 cgcgcctgtataagggtgacctagcttcaccctcaaggaatgattcactttacacaacactttctacacactctttctcagtttcattcctgac 20025312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 273 - 410
Target Start/End: Complemental strand, 22865881 - 22865744
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||| ||  |||||||| || ||||||||||||||| ||||||||||    
T  22865881 cgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacatttcttacacactttttctcagttccattactaacttgagcgt 22865782  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccac 410  Q
      |||||||||||| |||  | | ||||||||||||||    
T  22865781 caaagtgctaacgtacctgcatgcacctttcgttccac 22865744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 24647410 - 24647308
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||| |||||||   ||||||||||||||||||  |||||||||||  |||||||||||||||| ||||||    
T  24647410 cgcgcctatataagggtgaacttgcttcacccttaaggtatacatcacttttcacaacacttcttacacactctttttcagttccattactgaattgagc 24647311  T
Q  371 gtt 373  Q
    |||    
T  24647310 gtt 24647308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 281 - 372
Target Start/End: Complemental strand, 25333847 - 25333756
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    |||| |||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||  || |||| ||||||||||||||||||    
T  25333847 taagagtgaacttgcttcactctcaaagtatgattcacttttaacaacactttctacacactctctcttagttacattactgacttgagcgt 25333756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 276 - 414
Target Start/End: Complemental strand, 8939028 - 8938891
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| ||| |||||| | ||||||||||||| |||||||||||||||| || |||||| ||||||||||| |||||||||| |||||||| |||| ||      
T  8939028 ctatataacggtgacttagcttcaccctcaatgtatgattcacttttccca-cactttttacacactctttctcagttccaatactgactagagcattgg 8938930  T
Q  376 agtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    |||| ||||||||||  | | ||||||||||| ||||||    
T  8938929 agtgttaacgtgcctgcatgcacctttcgttctaccgca 8938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 277 - 368
Target Start/End: Complemental strand, 34493629 - 34493542
Alignment:
Q  277 tatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttga 368  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||  ||||||||  ||| |||||||||||||||||    
T  34493629 tatttaagggtgacttagtttcaccctcaaggtatgattcacttttcacaacactttct--acactctt--tcaattccattactgacttga 34493542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 563
Target Start/End: Complemental strand, 20025215 - 20025134
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctcca 563  Q
    ||||||||||||||| ||||||||||||||||| | |||| | |||||| |||||||||  ||||||| |||||||||||||    
T  20025215 ctcatccatcctcaccagacatatcatttgacgtttgaagaaagggatcattcgctaaccgccacggtctaacaatcctcca 20025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 22903025 - 22902882
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgtt 581  Q
    ||||||||||||||   |||| ||||| |  ||||||||| ||||||||||||||||||   ||| || |||  |||||||| | || ||||||||||||    
T  22903025 ctcatccatcctcatcggacagatcatatagcgctagaagaaggggatcgttcgctaaccgtcacagtataatgatcctccaccataatcgttttctgtt 22902926  T
Q  582 atacgttcctctgccgtaaccgttttttgttacacgttcctcca 625  Q
    |   | ||||| |||||| |||||||  ||||||||||||||||    
T  22902925 acgtgctcctccgccgtatccgttttcagttacacgttcctcca 22902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 19993182 - 19993232
Alignment:
Q  319 ttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  19993182 ttttcacaacactttcaacacgctctttctcagttccattactgacttgag 19993232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 26348127 - 26348191
Alignment:
Q  350 agttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    |||||||||| |||||||||||||  |||||||||||||||  ||  ||||||||||||||||||    
T  26348127 agttccattaatgacttgagcgttggagtgctaacgtgcctgcagacacctttcgttccaccgca 26348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 18799826 - 18799759
Alignment:
Q  347 ctcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    |||||||||||||||||||||| |||   |||||||||||| ||  ||||| ||||||||||||||||    
T  18799826 ctcagttccattactgacttgatcgtcggagtgctaacgtgactgcaggaatctttcgttccaccgca 18799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 19990860 - 19990925
Alignment:
Q  89 atcaatcacacgttgacatgtagcctaa--ttacaccgctataaggctccgctcctgaaggaacac 152  Q
    ||||||| ||||||||||||| ||||||  || ||||||  ||||||||||| |||||||||||||    
T  19990860 atcaatctcacgttgacatgtggcctaaacttgcaccgccttaaggctccgcgcctgaaggaacac 19990925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 25828970 - 25829076
Alignment:
Q  284 gggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaa 383  Q
    |||||| |||| ||||||||||||| |    ||||||||||||| ||||  |||||||| || |||| |||||||| ||||| ||||||   | ||||||    
T  25828970 gggtgaacttgtttcaccctcaagggacacatcacttttcacaatacttcttacacactttttctcaattccattattgactagagcgtcagattgctaa 25829069  T
Q  384 cgtgcct 390  Q
    |||||||    
T  25829070 cgtgcct 25829076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 26348061 - 26348099
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  26348061 gcgcctatataagggtgaacttgcttcaccctcaaggta 26348099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 31202345 - 31202383
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  31202345 gcgcctatataagggtgaacttgcttcaccctcaaggta 31202383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 19846125 - 19846053
Alignment:
Q  337 cacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttcca 409  Q
    ||||||||| || ||||||| |||||||||||| |||  |||||||| ||| ||  ||| |||||||||||||    
T  19846125 cacactctttcttagttccaatactgacttgagtgttagagtgctaatgtgtctgcaggcacctttcgttcca 19846053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 21213365 - 21213329
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaag 307  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  21213365 cgcgcctatataagggtgaacttgcttcaccctcaag 21213329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 32401300 - 32401252
Alignment:
Q  21 tagtgctagcaacactatcttttaaacactatctctaatcctcactctt 69  Q
    |||||||||||||||  |||||| |||||| |||||||| |||||||||    
T  32401300 tagtgctagcaacaccttcttttgaacactctctctaatactcactctt 32401252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 271 - 536
Target Start/End: Complemental strand, 26977862 - 26977597
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||| |  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  26977862 cgcgcctatataagggtcaaattgcttcaccctcaaggtatgattcatttttcacaatactttctacacactctttctcggttccattactgacttgagc 26977763  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatcac-gtcacaccggagcaattttacg 469  Q
    |||  |||||||||||||||  ||| ||||||||||||||||||||||||||| ||| ||||||| |||||| | || |||| |||  ||| | ||| ||    
T  26977762 gttggagtgctaacgtgcctgcaggcacctttcgttccaccgcaaagattcatcaccgctgtaccggaaaccgttactgtcataccatagc-actttccg 26977664  T
Q  470 ccaccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgc 536  Q
    ||||| |||| |||||| ||| ||  |  |||| |||| ||| ||||||||||||||||||||||||    
T  26977663 ccaccgttgccactcattcattctagccggacagatcaattggcgctagaaggaggggatcgttcgc 26977597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 128 - 568
Target Start/End: Complemental strand, 22415041 - 22414600
Alignment:
Q  128 taaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgc-cgcgaggatcaccctacacgtgtcctctaatctt 226  Q
    ||||||||||| |||||||||||||| || ||||||||||| |||||||| |  ||||| |||   || |||||||||| |||| ||||| |||||   |    
T  22415041 taaggctccgcacctgaaggaacacgtcagctcaagtgcactgcgccacacataagcgcacccctgcgtgaggatcaccttacatgtgtcatctaactgt 22414942  T
Q  227 ccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcaca 326  Q
    || |||||| || ||||| ||| || |     |||| ||  || |  ||||||  |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  22414941 ccataatcatacgccgcataacacggagaccgttatgctcgacgcatgcctatacaaggatgaacttgcttcaccctcaagatatgattcacttttcaca 22414842  T
Q  327 acactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattac 426  Q
    |||||||||||||||| ||  |||||| ||||||||||||||||||   |||||||||||||||   || |||||||||||||||||||||| ||||       
T  22414841 acactttctacacactttttttcagtttcattactgacttgagcgtcagagtgctaacgtgcctgcgggcacctttcgttccaccgcaaagactcatcgt 22414742  T
Q  427 cactgtaccagaaaccatc-acgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatcatttgacgctagaaggagg 525  Q
    ||| ||||  |||||| ||   |||||| |||||| ||| |  |||||  |||| ||||||||||||||||  || | ||||||||  ||||||| |||     
T  22414741 caccgtactggaaaccgtcgttgtcacaacggagc-attatttgccactgttgccactcatccatcctcaccggaaagatcatttggagctagaatgaga 22414643  T
Q  526 ggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
    ||||||||| ||||| |||| ||| |||| |||||||| ||||    
T  22414642 ggatcgttcactaaccaccatggtctaacgatcctccaccgta 22414600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 196 - 444
Target Start/End: Complemental strand, 16050591 - 16050343
Alignment:
Q  196 gaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgc 295  Q
    |||||||||||||||||||||||||||   ||  ||||||||| ||||||||  || ||   ||||| |  ||  ||| ||||| |||||||| | ||||    
T  16050591 gaggatcaccctacacgtgtcctctaactgtctttaatcacacaccgcaaaatccggaatgatttattcccaatgcgcacctatataagggtggcattgc 16050492  T
Q  296 ttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctagg 395  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||  |||||||||||||||  ||     
T  16050491 ttcatcctcaaggtatggttcacttttcaccacactttctacacactctttctcagttccatcaatgacttgagcgttggagtgctaacgtgcctgcaga 16050392  T
Q  396 aacctttcgttccaccgcaaagattcattaccactgtaccagaaaccat 444  Q
     |||||||  |||||||| |||| ||||  ||||| |||| ||||||||    
T  16050391 tacctttctatccaccgcgaagactcatcgccactataccggaaaccat 16050343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 34273205 - 34273062
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| |||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||     
T  34273205 cctatataagggcgacattgcttcaccctcaaggtatgagtcactttacacaacactttctacacactctttctcagttccgttactgacttgagcattg 34273106  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
     ||||||||||||| |  ||| ||||||||| ||||||||||||    
T  34273105 gagtgctaacgtgcttgcaggtacctttcgtcccaccgcaaaga 34273062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 275 - 413
Target Start/End: Complemental strand, 12177504 - 12177366
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||| ||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||      
T  12177504 cctatataaggttgaacttgcttcctcctcaaggtataattcacttttcacaacactttctacacactctttctcagttccattactgacttgagtgtcg 12177405  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgc 413  Q
     ||||||||||||| | |||| |||||||||||||||||    
T  12177404 gagtgctaacgtgcatgtaggcacctttcgttccaccgc 12177366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 16030516 - 16030376
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| |||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16030516 gcgcctatataagggtggcttagcttcgccctcaaggtatgattcacttttcacaacactttctacacactcttattcagttccattactgacttgagca 16030417  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    ||| | || ||||||||||  ||  ||||||| ||||||||    
T  16030416 tttgactgataacgtgcctgcagacacctttcattccaccg 16030376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 5671868 - 5671773
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 390  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||    
T  5671868 cttcaccttcaatgtatgattcacttttcacaacactttctacacactctttctcagttccattactaacttgagcgttggagtgctaacgtgcct 5671773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 281 - 409
Target Start/End: Complemental strand, 52565692 - 52565564
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||  |||||||| ||||||||||||||||   |||||    
T  52565692 taaggatgaacttgcttcaccctcaagttatgattcacttttcacaacactttctgcgcactctttttcagttcctttactgacttgagcgtcagagtgc 52565593  T
Q  381 taacgtgcctctaggaacctttcgttcca 409  Q
    ||||||| ||  ||| |||||||||||||    
T  52565592 taacgtgtctgcaggcacctttcgttcca 52565564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 285 - 435
Target Start/End: Original strand, 33101490 - 33101640
Alignment:
Q  285 ggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaac 384  Q
    |||||| ||| |||||||||||| || | ||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||  |||||||||    
T  33101490 ggtgacattgtttcaccctcaagttacggttcacttttcacaacactttctacacactttttctcagttccattaccgacttgagcgttggagtgctaac 33101589  T
Q  385 gtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtacc 435  Q
    ||||||  | | ||||||| ||| || || |||| |||| | |||||||||    
T  33101590 gtgcctgcatgcacctttcattctacagcgaagactcatcaacactgtacc 33101640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 285 - 496
Target Start/End: Original strand, 23280245 - 23280454
Alignment:
Q  285 ggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaac 384  Q
    ||||| ||||||||||||||| || || ||||||||||||||||||| |  |||||| ||| ||||||||||||||||||||||| |||| |||| ||||    
T  23280245 ggtgaacttgcttcaccctcatggcattattcacttttcacaacactat--acacacactttctcagttccattactgacttgagagtttgagtgataac 23280342  T
Q  385 gtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgccaccattgctact 483  Q
     || ||  ||| ||||||||||||| | ||| ||||||| ||||   |||| |||||| ||| |||| |||| |||| | ||| ||||||| |||| |||    
T  23280343 atgtctgcaggcacctttcgttccatcacaaggattcatcaccaacataccggaaaccgtcaccgtctcaccagagc-actttccgccaccgttgccact 23280441  T
Q  484 catccatcctcac 496  Q
    ||| |||||||||    
T  23280442 cattcatcctcac 23280454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 439
Target Start/End: Complemental strand, 25408216 - 25408050
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    |||||||  |||||||| |||||||||||||||||| |    ||||||||||||||||||  ||||||||||   |||||| |||||||||||||||| |    
T  25408216 cgcctatgaaagggtgaacttgcttcaccctcaagggacacatcacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcat 25408117  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaa 439  Q
    |  |||||||||||| ||  ||| ||||||| |||||||||| ||| ||||| || | |||||||||    
T  25408116 tggagtgctaacgtgtctgcaggcacctttcattccaccgcagagactcattgccgccgtaccagaa 25408050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 200 - 383
Target Start/End: Original strand, 2140846 - 2141025
Alignment:
Q  200 atcaccctacacgtgtcctctaatc-ttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttc 298  Q
    |||||| |||||||||||||||| | || ||||||||||| || |||||| |||||| | |||| || | | |||| || | |||||||||| | |||||    
T  2140846 atcaccatacacgtgtcctctaaccgtttcctaatcacacaccacaaaacccgaaagtggttattctca-cgcgcgtctttataagggtgacttagcttc 2140944  T
Q  299 accctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaa 383  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||      ||| ||||||||||||||||||  ||||||||    
T  2140945 accctcaaggtatggttcactttccacaacactttctacacattctt----ttttcaattactgacttgagcgttggagtgctaa 2141025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 23728790 - 23728908
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| ||||||||| |||| |||||||||||||||    ||||||||||||||||||  ||||||||||| |||| |||||||| |||||||||||    
T  23728790 gcgcctatataagggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcatttccattaatgacttgagcg 23728889  T
Q  372 tttaagtgctaacgtgcct 390  Q
    |   | |||||||||||||    
T  23728890 tcataatgctaacgtgcct 23728908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 281 - 438
Target Start/End: Complemental strand, 18246254 - 18246098
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||||| |  ||||||||||||||||||| ||||||||| | ||||||| || |||||||| |||| ||| | |||| |||||||||||  ||||     
T  18246254 taagggtgacttatcttcaccctcaaggtatgaatcacttttctc-acactttttatacactctttctcaattctaatactcacttgagcgttggagtgt 18246156  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccaga 438  Q
    |||||||| |  ||  ||||||||||||||||| |||| |||| ||||| ||||||||    
T  18246155 taacgtgcttacagacacctttcgttccaccgccaagactcatcaccaccgtaccaga 18246098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 275 - 421
Target Start/End: Original strand, 1659762 - 1659908
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||||| |||||| ||||| |||| |||   ||||||||||||||||||  |||||| |||| ||||| ||||||| |||||||||||||     
T  1659762 cctatataagggtgaacttgctccacccacaagatatttctcacttttcacaacacttcttacacattctttctcagatccattattgacttgagcgttg 1659861  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattc 421  Q
     |||| |||||||  | |||  |||||||||||||||| | ||||||    
T  1659862 gagtgataacgtgtatgtagacacctttcgttccaccgtatagattc 1659908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 271 - 418
Target Start/End: Original strand, 4601456 - 4601603
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||| ||| ||||||||| |||||||||||||||||| |    |||  ||||||| |||||  |||||| | || ||||||| ||||||||||||||||    
T  4601456 cgcgcgtatataagggtgaacttgcttcaccctcaagggacacatcaaatttcacagcacttattacacattatttctcagtttcattactgacttgagc 4601555  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||   |||||||||||||||  ||  ||||||||||||||||| ||||    
T  4601556 gtcggagtgctaacgtgcctgcagtcacctttcgttccaccgcgaaga 4601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 418
Target Start/End: Original strand, 2612638 - 2612779
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| |||||||||  | |||||| ||||||||||||||||| ||||  |  || ||| ||||||||||| |||||||||| |||||||||||||||||     
T  2612638 ctatataagggtgagttagcttcatcctcaaggtatgattcattttttccg-cattttttacacactcttcctcagttccaatactgacttgagcgtttc 2612736  T
Q  376 agtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    | | |||||||| ||  ||  |||||||||||| |||||||||    
T  2612737 aatactaacgtgtctgcagacacctttcgttcctccgcaaaga 2612779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 5459702 - 5459844
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctag 394  Q
    ||||| || ||| |||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||  |||| ||||  ||||||||||| |||  |     
T  5459702 cttcatccccaatgtatgattcactttacacaacactttctacacactctttctcag-tccgttactgttttgaacgttggagtgctaacgtacctgcat 5459800  T
Q  395 gaacctttcgttccaccgcaaagattcattaccactgtaccaga 438  Q
    | ||||||||| ||||| | |||| ||||  |||| ||||||||    
T  5459801 gcacctttcgtcccaccacgaagactcatcgccaccgtaccaga 5459844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 423
Target Start/End: Original strand, 21682561 - 21682711
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactct-tactcagttccattactgacttgagcg 371  Q
    ||||||| |||||||||  |||| ||||||||||||||    | ||||||||||| | ||  |||||||||| | || ||||||||||||||||||||||    
T  21682561 cgcctatataagggtgaatttgcgtcaccctcaaggtacacattacttttcacaatatttcttacacactctcttct-agttccattactgacttgagcg 21682659  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    ||  ||||| ||||| ||| |||| |||||||||||||| ||| ||| ||||    
T  21682660 ttggagtgcaaacgtacctataggcacctttcgttccacagcagagactcat 21682711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 558
Target Start/End: Original strand, 5459867 - 5459943
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatc 558  Q
    |||||||||||||||  || | |||||||| ||| |||||||||||||| ||||||||| |||||||| ||||||||    
T  5459867 ctcatccatcctcaccggatagatcatttggcgccagaaggaggggatccttcgctaaccaccacggtctaacaatc 5459943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 12032222 - 12032300
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactca 350  Q
    ||||||||| |||||||||| | | |||||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||||    
T  12032222 cgcgcctatataagggtgacttagtttcacc-tcaagttatgattcattttacacaacactttctacacactctttctca 12032300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 411
Target Start/End: Complemental strand, 8019068 - 8018931
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| |||||||||| | ||||||||| |||||||||||||||||||| |   ||||| | |||| ||   |||| ||||  |||||||||||||||    
T  8019068 cgcctatataagggtgacatagcttcacccccaaggtatgattcacttttc-ccctactttttgcacattccatctcatttcccatactgacttgagcgt 8018970  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
       ||||||||||||||| |||  ||||||||| |||||    
T  8018969 cgtagtgctaacgtgcctgtagatacctttcgtcccacc 8018931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 14255051 - 14255139
Alignment:
Q  323 cacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    ||||||||||  ||||||||||| ||||||| ||||| |||||||||||||  ||||||| ||||| |  ||| ||| |||||||||||    
T  14255051 cacaacacttcttacacactctttctcagtttcattaatgacttgagcgttggagtgctatcgtgcttgcaggcacccttcgttccacc 14255139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 43344450 - 43344579
Alignment:
Q  308 gtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttc 407  Q
    |||||||||||||||| |  |||||| ||||||||||| || |||| || ||||||||||||||||  |||||||||||  ||  ||  ||||||| | |    
T  43344450 gtatgattcacttttcccc-cactttttacacactctttct-agtttcaatactgacttgagcgttcgagtgctaacgtttctgcagacacctttcatcc 43344547  T
Q  408 caccgcaaagattcattaccactgtaccagaa 439  Q
    ||||||||||| ||||  |||| |||||||||    
T  43344548 caccgcaaagactcatcgccaccgtaccagaa 43344579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 48637596 - 48637530
Alignment:
Q  348 tcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    |||||||||||||||||||||||||   |||||| ||||||||  ||| ||||||||||| ||||||    
T  48637596 tcagttccattactgacttgagcgtcagagtgctgacgtgcctgcaggcacctttcgttctaccgca 48637530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 415
Target Start/End: Original strand, 21098819 - 21098958
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||||| ||||||||||||||||||||     ||||||||| |||||||   | ||  |  || ||||||||||||||||||||| |||      
T  21098819 cctatataagggtgaacttgcttcaccctcaaggtacacaacacttttcataacacttataatacttttcta-tcagttccattactgacttgatcgtcg 21098917  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccaccgcaa 415  Q
     |||||||| ||||||  ||  |||||||||||||||||||    
T  21098918 gagtgctaatgtgcctgcagccacctttcgttccaccgcaa 21098958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 39019749 - 39019702
Alignment:
Q  21 tagtgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    |||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  39019749 tagtgctagcaacactctcttttgaacactttctctaatactcactct 39019702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 409
Target Start/End: Complemental strand, 16522829 - 16522759
Alignment:
Q  339 cactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttcca 409  Q
    ||||||| |||| |||| ||| |||||||| |||| ||||||||||||||||  ||  |||||||||||||    
T  16522829 cactctttctcaattcctttattgacttgaacgttgaagtgctaacgtgccttcagacacctttcgttcca 16522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 641
Target Start/End: Complemental strand, 26977570 - 26977524
Alignment:
Q  595 ccgtaaccgttttttgttacacgttcctccatcgcaacagttcacag 641  Q
    ||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  26977570 ccgtaaccgttttatgttacacattcctccaccgcaacagttgacag 26977524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 415
Target Start/End: Original strand, 16299591 - 16299687
Alignment:
Q  319 ttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaa 415  Q
    ||||||||||||||  ||| ||||||| ||||||| ||||||| |||||| |||   |||||||| |||| |  ||  || ||||||||||||||||    
T  16299591 ttttcacaacacttcttacgcactctttctcagtttcattacttacttgaacgtcggagtgctaatgtgcatgcagacacgtttcgttccaccgcaa 16299687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 91 - 405
Target Start/End: Complemental strand, 24500089 - 24499777
Alignment:
Q  91 caatcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcc 189  Q
    |||||||| ||||||| ||||| ||| ||||||||   |||||||| |||||||||| |||||| || ||||||||||||||  |||| || |||||| |    
T  24500089 caatcacatgttgacacgtagcataacttacaccgacttaaggctctgctcctgaagaaacacgtcaactcaagtgcaccgcatcacacagaagcgcgtc 24499990  T
Q  190 cgccgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtga 289  Q
    |   | ||||||| | |||||||||||||| |  | |||||||||||||   ||||||| ||||   | |||| || ||| | ||||| | |||||||||    
T  24499989 ccgtgtgaggatctctctacacgtgtcctccagccatccctaatcacacgtagcaaaacccgaa---gattattctcaacgcacgcctttataagggtga 24499893  T
Q  290 ccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcc 389  Q
     ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||| ||    
T  24499892 acttgcttcacccttaaggtatgattcacttttcacaacattttctacacactctttctcatttccattactgacttgagcgttggagtgctaacgttcc 24499793  T
Q  390 tctaggaacctttcgt 405  Q
    |  ||| |||||||||    
T  24499792 tagaggcacctttcgt 24499777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 128 - 435
Target Start/End: Original strand, 12127487 - 12127796
Alignment:
Q  128 taaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcccgcc--gcgaggatcaccctacacgtgtcctctaatct 225  Q
    |||||||||||  |||||||||||||||| ||  | ||||| || ||||| | ||| |||||| ||  ||||||||||| |||||||||| |||||| |     
T  12127487 taaggctccgcatctgaaggaacacgccagctttaatgcacagcaccacatactagagcgccccccacgcgaggatcactctacacgtgttctctaaccg 12127586  T
Q  226 tccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac 325  Q
    ||||||||||||| |  ||||||||||| | |  ||| || ||  || || ||| ||||| |||| ||||||||||  ||| ||||||||||||||||||    
T  12127587 tccctaatcacacgctacaaaactcgaaggcggatattctcaaagcgtgcatatataaggttgacattgcttcaccaccaaagtatgattcacttttcac 12127686  T
Q  326 aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcatta 425  Q
    |||||||||||||||| | | || |||| |||||||||||||||||||  |||||||||||||||  ||| ||||||||| ||||||| ||||  ||| |    
T  12127687 aacactttctacacacacgttcttagtttcattactgacttgagcgttggagtgctaacgtgcctgcaggtacctttcgtcccaccgcgaagacccatca 12127786  T
Q  426 ccactgtacc 435  Q
    |||| |||||    
T  12127787 ccaccgtacc 12127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 69 - 418
Target Start/End: Complemental strand, 3586690 - 3586338
Alignment:
Q  69 tgttctagaccagttagaatatcaatcacacgttgacatgtagcctaa--ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgc 166  Q
    |||||| |||| ||||||| | |||||||||||| ||| || || |||  ||||| ||   ||||||||||| | ||| ||||||||||| ||| |||      
T  3586690 tgttctggaccggttagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaaggctccgcgcttgagggaacacgccagctcgagtaa 3586591  T
Q  167 accgcgccacaaagtagcgcgcccgc-cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatcct 265  Q
    ||||| ||||| || ||| | ||  | | ||||||||| |||||| ||||||||||| | |||||| |||||| ||||| |||    ||| | ||||       
T  3586590 accgcaccacacagaagcacacctccgcacgaggatcatcctacatgtgtcctctaaccgtccctattcacacgccgcataaccaagaagcggttatgac 3586491  T
Q  266 taactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgact 365  Q
     ||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  3586490 caacgcgcgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctactcactttttctcagttccattactgact 3586391  T
Q  366 tgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    |||||||   ||| ||||||||||   | | ||||||| ||||||||||||||    
T  3586390 tgagcgtcggagtcctaacgtgccggcatgcacctttcattccaccgcaaaga 3586338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 271 - 418
Target Start/End: Complemental strand, 12169095 - 12168947
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttg-ag 369  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||    
T  12169095 cgcgcctatttaagggtggcattgcttcaccctcaaggtataattcacttttcacaacactttctacacactctttcttagttccattactgacttgaag 12168996  T
Q  370 cgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||||  |||| ||| ||||||  ||  ||||||||||||||||||||||    
T  12168995 cgttggagtgttaatgtgcctgcagacacctttcgttccaccgcaaaga 12168947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 193 - 423
Target Start/End: Complemental strand, 36267698 - 36267468
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaaga-gtttatccttaactcgcgcctatttaagggtgacc 291  Q
    |||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||   ||| | |||||||| || | || |||| ||||||||| |    
T  36267698 cgcgaggatcaccctatacgtgtcttctaaccgtcccaaatcatacgccgcataa-tcttgagacggttatccttgacgcacgtctatataagggtgaac 36267600  T
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctc 391  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||  |||| |||| ||| |     
T  36267599 ttgcttcaccctcaaggtatgattcacttttcacaaccctttctacacactctttctcagtttcattactgacttgagcgttggagtgttaacatgcatg 36267500  T
Q  392 taggaacctttcgttccaccgcaaagattcat 423  Q
     ||| ||||||| |||||| || |||| ||||    
T  36267499 caggcacctttcattccactgcgaagactcat 36267468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 271 - 418
Target Start/End: Complemental strand, 15825276 - 15825129
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||||||||  |||||||| ||||||||||||||||||||    | ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15825276 cgcgcctatacaagggtgaacttgcttcaccctcaaggtacacatgacttttcacaacactttctacacactctttctcagttccattaccgacttgagc 15825177  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||  ||||||||||||||||  ||  || |||||||||||| ||||||    
T  15825176 gtcaaagtgctaacgtgcctgcagacacatttcgttccaccacaaaga 15825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 194 - 423
Target Start/End: Original strand, 45258044 - 45258273
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatct-tccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacct 292  Q
    |||||||||||||| || ||||||||||| |  ||||||||||||| |||||||||||| |   | ||||| | | |  |  ||||| |||||||||| |    
T  45258044 gcgaggatcaccctgcatgtgtcctctaaccgctccctaatcacacgccgcaaaactcggagacggttatcgtca-cgaggacctatataagggtgactt 45258142  T
Q  293 tgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctct 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||| ||||||| |||||||| ||  |||| ||||||||||      
T  45258143 tgcttcaccctcaaggtatgattcacttttcacaacactttcgacacattctttcttagtttcattacttacttgagctttggagtgttaacgtgcctgc 45258242  T
Q  393 aggaacctttcgttccaccgcaaagattcat 423  Q
    ||  | ||||||||||||||| |||| ||||    
T  45258243 agacatctttcgttccaccgcgaagactcat 45258273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 45715106 - 45714977
Alignment:
Q  282 aagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgct 381  Q
    ||||||||| | |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||  ||||||    
T  45715106 aagggtgacttagcttcaccttcaaggtatgattcaattttcaccacactttttacacactctttctcagtttcattactgacttgagcgttggagtgct 45715007  T
Q  382 aacgtgcctctaggaacctttcgttccacc 411  Q
    |||||||||  | | |||||||||||||||    
T  45715006 aacgtgcctgcatgcacctttcgttccacc 45714977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 271 - 641
Target Start/End: Original strand, 15390554 - 15390924
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||  |||||||| ||  | |||||||| ||| ||||||||    
T  15390554 cgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactgtttattagttccatcacttacttgagc 15390653  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacg 469  Q
    ||  |||||||||||||||  |||| | ||||||||||| ||| |||| ||||  |  | || || ||| || | | ||||||||  |||| ||| |  |    
T  15390654 gtcaaagtgctaacgtgccaataggcagctttcgttccatcgcgaagactcatcgctgccgtgccggaagccgttaccgtcacactagagc-attctctg 15390752  T
Q  470 ccaccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtac 569  Q
     |||| |||| ||||| || | ||||| ||||| |||||||| ||||||||||||||||||||||||||||  || | ||  ||  ||||||||  |||     
T  15390753 gcaccgttgccactcaaccgttctcaccagacagatcatttggcgctagaaggaggggatcgttcgctaaccgcctcagtccaaggatcctccactgtaa 15390852  T
Q  570 tcgttttctgttatacgttcctctgccgtaaccgttttttgttacacgttcctccatcgcaacagttcacag 641  Q
      |||||||||||  ||   ||| |||||||| |||||| ||||||||||| | ||||||||| ||| ||||    
T  15390853 cagttttctgttacgcgcatctccgccgtaactgtttttagttacacgttcattcatcgcaacggttaacag 15390924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 19919036 - 19919175
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| |||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||  |||    
T  19919036 gcgcctatataagagtgatattgcttcatcctcaaggtatgattcacttttcacaacactttctacatactctttctcatttccattattgactttggcg 19919135  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    ||  ||| |||| || |||  ||| |||||||||||||||    
T  19919136 ttagagttctaatgttcctgcaggcacctttcgttccacc 19919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 20120441 - 20120328
Alignment:
Q  299 accctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaac 398  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||| ||||||||||||||| ||   |||||||||||||||  ||  ||    
T  20120441 accctcaaggtatgattcacttatcacaccactttccacacactctttctcagtttcattactgacttgagagtcggagtgctaacgtgcctgcagacac 20120342  T
Q  399 ctttcgttccaccg 412  Q
    ||||||||||||||    
T  20120341 ctttcgttccaccg 20120328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 295 - 435
Target Start/End: Original strand, 27846512 - 27846652
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctag 394  Q
    ||||||||||||||||  ||||||||| |||||||||||||||| ||| || |||||||||||||||||||||| ||||  |||||||||||||||  ||    
T  27846512 cttcaccctcaaggtacaattcactttacacaacactttctacaaactgtttctcagttccattactgacttgatcgttggagtgctaacgtgcctgcag 27846611  T
Q  395 gaacctttcgttccaccgcaaagattcattaccactgtacc 435  Q
    | || |||||| | || || |||| ||||| |||| |||||    
T  27846612 gcacttttcgtccaactgcgaagactcattgccaccgtacc 27846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 18135992 - 18135852
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| ||||||||| ||||||||||| || ||||||   |||||||| |||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  18135992 gcgcctatataagggtgaacttgcttcaccttctaggtatacatcacttttgacaacacttcttacacactctttctcagttccattactaacttgagcg 18135893  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    |   ||| |||||||||||  ||| ||||||| | ||||||    
T  18135892 tcagagtactaacgtgcctacaggcacctttcatcccaccg 18135852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 625
Target Start/End: Original strand, 19919212 - 19919368
Alignment:
Q  469 gccaccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
    |||||||||||  ||||||||| |||||  ||||||||||||  | ||| |||||||| |||||||||||||  ||| ||| |||| |||||||| | ||    
T  19919212 gccaccattgcctctcatccattctcaccggacatatcattttgctctataaggagggaatcgttcgctaaccgccaaggtctaacgatcctccaccata 19919311  T
Q  569 ctcgttttctgttatacgttcctctgccgtaaccgttttttgttacacgttcctcca 625  Q
     ||||||||||||| ||| ||||| | ||||||||||||  ||||||||| ||||||    
T  19919312 atcgttttctgttacacgctcctccgtcgtaaccgttttcagttacacgtccctcca 19919368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 271 - 388
Target Start/End: Complemental strand, 29711138 - 29711023
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||  ||||| |||||  ||| |||||||| ||||||||||    
T  29711138 cgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcgtacactctctt--tcaattccattagtgacttgagc 29711041  T
Q  371 gtttaagtgctaacgtgc 388  Q
    |||  |||||||||||||    
T  29711040 gttggagtgctaacgtgc 29711023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 281 - 418
Target Start/End: Original strand, 10923144 - 10923281
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    ||||||||| |||||||||||||||||| |   ||||||||||||| ||||||||||||||||||  | |||||||| ||||||||||| ||   ||||     
T  10923144 taagggtgaacttgcttcaccctcaaggcacacttcacttttcacagcactttctacacactctttataagttccataactgacttgagtgtcggagtga 10923243  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||||||||||  |   ||||||||||||||||| ||||    
T  10923244 taacgtgcctacatacacctttcgttccaccgcgaaga 10923281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 315 - 409
Target Start/End: Complemental strand, 18770392 - 18770296
Alignment:
Q  315 tcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcc--tctaggaacctttcgttcca 409  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   ||||||||||||||  | |||| |||||||||||||    
T  18770392 tcacttttcacaacactttctacacactctttctcaatttcattactgacttgagcgtcagagtgctaacgtgcctatgtaggcacctttcgttcca 18770296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 273 - 439
Target Start/End: Complemental strand, 23257901 - 23257736
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||||||| | ||||||||||||||||| |  ||| |||| | ||||||||||||||    
T  23257901 cgcctatataagggtgaccttgattcaccctcaaggtacaattcacttttc-ccacactttctacacactccttgtcatttccttcactgacttgagcgt 23257803  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaa 439  Q
      |||||||| || ||||  |||||  |||||| |||| |  |||| || || |||| |||||||||    
T  23257802 caaagtgctatcgcgcctgcaggaaattttcgtcccactgtgaagactcgttgccaccgtaccagaa 23257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 409
Target Start/End: Original strand, 24157275 - 24157413
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||| ||| ||||||||| ||||||||||||||||||||      ||||||||||||||||  || ||  | |  ||||||||||||||||||||||||    
T  24157275 cgcgcttatataagggtgaacttgcttcaccctcaaggtacacaatacttttcacaacacttcttagactttatctctcagttccattactgacttgagc 24157374  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttcca 409  Q
    ||   ||||||||||||| | |||| |||||||||||||    
T  24157375 gtcagagtgctaacgtgcatgtaggcacctttcgttcca 24157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 18772365 - 18772295
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactctta 346  Q
    |||| ||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  18772365 ctatataagggtgaacttgcttcaccctcaaggtgcacgtcacttttcacaacactttctacacactctta 18772295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 24755556 - 24755452
Alignment:
Q  305 aaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcg 404  Q
    |||||| |||||||||||||||||| |||||||||||| || |  |||||||| ||||||||||| |||  ||| ||||||||| | || | | ||||||    
T  24755556 aaggtacgattcacttttcacaacaatttctacacactttttcagagttccatcactgacttgagggttggagtactaacgtgcttgtatgcaactttcg 24755457  T
Q  405 ttcca 409  Q
    |||||    
T  24755456 ttcca 24755452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 19050407 - 19050518
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| ||| |||||| |||| ||||    ||||||||||||||||||  ||||| ||||| || ||||| |||||||||||||||||     
T  19050407 gcctatataagggtgaacttacttcactctcagggtacacatcacttttcacaacacttcttacactctctttcttagttctattactgacttgagcgtc 19050506  T
Q  374 taagtgctaacg 385  Q
      ||||||||||    
T  19050507 agagtgctaacg 19050518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 23493945 - 23493812
Alignment:
Q  91 caatcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgcaccgcgccacaaagtagcgcgcc 189  Q
    ||||| |||||||||| || |||||| |||||||||  | ||||||||| | |||||| |||| ||| || || |||| ||||||||| || |||||||     
T  23493945 caatcgcacgttgacacgtggcctaacttacaccgccttcaggctccgcgcttgaaggtacacaccagcttaaatgcatcgcgccacacaggagcgcgct 23493846  T
Q  190 cgc-cgcgaggatcaccctacacgtgtcctctaa 222  Q
    | | ||| |||||||||||||| |||||||||||    
T  23493845 cccacgcaaggatcaccctacatgtgtcctctaa 23493812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 17658079 - 17658030
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttc 323  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  17658079 cgcctatttaagggtgacttagcttcaccc-caaggtatgattcacttttc 17658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 17672091 - 17672042
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttc 323  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  17672091 cgcctatttaagggtgacttagcttcaccc-caaggtatgattcacttttc 17672042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 17627019 - 17626971
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcactttt 322  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  17627019 cgcctatttaagggtgacttagcttcaccc-caaggtatgattcactttt 17626971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 18134418 - 18134338
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacacttt--ctacacactcttactcagttccattactgacttgagcgtt 373  Q
    ||||||||||||||||  ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||| ||| ||||||    
T  18134418 cttcaccctcaaggtacaattcatttttcacaatactttttctacatactctttctcaattccattactggctttagcgtt 18134338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 507
Target Start/End: Complemental strand, 30638628 - 30638449
Alignment:
Q  328 cactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattacc 427  Q
    ||||||| || ||||||| || ||||||||||||||| |||||||  ||||| ||||||| || |||  | ||||| ||||||||| | || |||  |||    
T  30638628 cactttccacgcactctttcttagttccattactgacatgagcgtcgaagtgttaacgtgtctgtagacatctttctttccaccgcgatgactcaacacc 30638529  T
Q  428 actgtaccagaaaccatca-cgtcacaccggagcaattttacgccaccattgctactcatccatcctcactagacatatca 507  Q
    ||  |||||||| |||| | ||||||||| | || ||| | ||| ||| |||| |||||||| | |||||| |||||||||    
T  30638528 accctaccagaagccattaccgtcacaccagtgc-attatccgcaaccgttgccactcatccgttctcactggacatatca 30638449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 36022551 - 36022464
Alignment:
Q  302 ctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 390  Q
    |||||| ||||||||||||| | || |||||| |||| |||||| ||||||  || ||||||||||||||||  |||| ||||||||||    
T  36022551 ctcaagatatgattcactttgctca-cactttttacaaactctttctcagtctcaatactgacttgagcgttagagtgttaacgtgcct 36022464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 12989372 - 12989326
Alignment:
Q  22 agtgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    ||||||||||||||| |||||| |||||| |||||||| ||||||||    
T  12989372 agtgctagcaacactctcttttgaacactctctctaatactcactct 12989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 29137979 - 29137922
Alignment:
Q  315 tcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| ||||||| ||  ||||||||||| ||||||| ||||| ||||||||||||    
T  29137979 tcactttccacaacatttcttacacactctttctcagttgcattaatgacttgagcgt 29137922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 197 - 413
Target Start/End: Original strand, 95705 - 95921
Alignment:
Q  197 aggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgct 296  Q
    |||||||| ||||| ||||||||||| | ||||||||||||| |||||||||||| | |    ||| |  ||| || |||||| |||||||||| |||||    
T  95705 aggatcactctacatgtgtcctctaaccgtccctaatcacacgccgcaaaactcggaggtagatattccaaacgcgtgcctatataagggtgacgttgct 95804  T
Q  297 tcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctagga 396  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||  ||||    
T  95805 tcaccctgaaggtatgattcacttttcacaacactttctacgcactctttctcagttccattactaacttgagcgttgaagtggtaacgtgcctgcagga 95904  T
Q  397 acctttcgttccaccgc 413  Q
    |||||| || |||||||    
T  95905 accttttgtcccaccgc 95921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 274 - 625
Target Start/End: Original strand, 68774 - 69116
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||    
T  68774 gcctatataagggtgaccttgcttctccctcaaggtatgattcacttttcacaacactttct--atactctttctcagttccattactaacttgagcgtt 68871  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgcca 472  Q
      |||||||||||| ||        | ||||||||||| |||||| |||| ||| |  ||||||||||  ||| |||||||||||||| | ||| |||||    
T  68872 ggagtgctaacgtgtct-------gcattcgttccaccacaaagactcatcacccccataccagaaactgtcatcgtcacaccggagc-actttccgcca 68963  T
Q  473 ccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcg 572  Q
     |||| | ||||||||||| ||| | ||||||||||||| | | || ||||||  ||| || ||||||  ||||||| ||||||||||||| |||| | |    
T  68964 tcatttccactcatccatcttcagtggacatatcatttggcacaaggaggaggtaatcttttgctaacctccacggtctaacaatcctccaccgtaattg 69063  T
Q  573 ttttctgttatacgttcctctgccgtaaccgttttttgttacacgttcctcca 625  Q
    ||| ||||||  || ||||| ||| ||||| || |  ||||||||||||||||    
T  69064 tttcctgttacccgctcctccgccataaccattatccgttacacgttcctcca 69116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 194 - 410
Target Start/End: Original strand, 9800977 - 9801191
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacctt 293  Q
    |||||| |||||||||| ||||||||||| | ||||||||||||| ||||||||| |||| | |   ||  ||||  || |||||| |||||||||| ||    
T  9800977 gcgagggtcaccctacatgtgtcctctaaccgtccctaatcacacgccgcaaaacccgaatgcgcc-atttttaatgcgtgcctatataagggtgacatt 9801075  T
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctcta 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| | || ||||||||||||| |  |    
T  9801076 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctctgttctattactgacttgagtg-ttgagtgctaacgtgcttgca 9801174  T
Q  394 ggaacctttcgttccac 410  Q
    || ||||||||||||||    
T  9801175 ggcacctttcgttccac 9801191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 196 - 631
Target Start/End: Original strand, 17143643 - 17144078
Alignment:
Q  196 gaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgc 295  Q
    ||||||| ||||||| |||||||||| || ||||||||||||| |||| |||| |||| |   ||||  | ||  | ||| ||| |||||||||  |||     
T  17143643 gaggatcgccctacatgtgtcctctagtcgtccctaatcacacgccgcgaaacccgaaggcagttattttcaatgcacgcttatataagggtgatgttgt 17143742  T
Q  296 ttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctagg 395  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||  ||     
T  17143743 ttcacccccaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagcgtcggagtgctaacgtgcct-aaga 17143841  T
Q  396 a-acctttcgttccaccgcaaagattcattaccactgtaccagaa-accatcacgtcacaccggagcaattttacgccaccattgctactcatccatcct 493  Q
    | ||||||| | ||||||  |||| |||  ||| |  |||| |||     |  ||||||||||||| |||| | ||||||| |||  |||||||||| ||    
T  17143842 acacctttcatcccaccgtgaagactcaaaacctccataccggaagttgttgccgtcacaccggag-aattatccgccaccgttgacactcatccattct 17143940  T
Q  494 cactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctct 593  Q
    ||| ||| | || |||||   ||||||||||||||||||||||||||  |||  ||||||| |||||||| ||||  || |||||||||  ||  ||||     
T  17143941 cacaagatagataatttggaactagaaggaggggatcgttcgctaaccgccatagtttaactatcctccaccgtaaccgctttctgttacgcggacctcc 17144040  T
Q  594 gccgtaaccgttttttgttacacgttcctccatcgcaa 631  Q
    ||||||||| ||||  ||||||| |||||||| |||||    
T  17144041 gccgtaaccattttcagttacactttcctccaccgcaa 17144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 259 - 390
Target Start/End: Complemental strand, 30607062 - 30606931
Alignment:
Q  259 ttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccatt 358  Q
    |||| |||||| ||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| |||||||    
T  30607062 ttattcttaacgcgcgcctatataagggtggccttacttcaccctcaaggtataattcacttttcacaacactttctactcactctttctcaattccatt 30606963  T
Q  359 actgacttgagcgtttaagtgctaacgtgcct 390  Q
    |||||||||||||||  | ||||||| |||||    
T  30606962 actgacttgagcgttggaatgctaacatgcct 30606931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 271 - 390
Target Start/End: Complemental strand, 16704524 - 16704405
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||| |||    
T  16704524 cgcgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctacactctctttctcaactccattactgacttcagc 16704425  T
Q  371 gtttaagtgctaacgtgcct 390  Q
    |||  | ||| |||||||||    
T  16704424 gttggaatgccaacgtgcct 16704405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 271 - 418
Target Start/End: Original strand, 431285 - 431432
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||  | |||||||||||||||| |  |||||||||||||| ||||||| || ||||||| ||||||||||||| ||||||||||    
T  431285 cgcgcctatataagggtggacatgcttcaccctcaagggacaattcacttttcacagcactttccacgcactctttctcagttccattattgacttgagc 431384  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||  ||||||||||||| || |||| ||||||| ||||||||| ||||    
T  431385 gtcgaagtgctaacgtgtctgtaggcacctttctttccaccgcgaaga 431432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 275 - 390
Target Start/End: Original strand, 21342260 - 21342375
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||     
T  21342260 cctatataagggtaaccttacttcaccctcaatgtatgattcacttttcacaacactttctatacactctttatcagttccattactgacttgagcgttg 21342359  T
Q  375 aagtgctaacgtgcct 390  Q
     | || ||||||||||    
T  21342360 tactgttaacgtgcct 21342375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 28723743 - 28723907
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||| |||| ||| ||||||||| || || |||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  28723743 cgcgcctatataaggatgacattgtttcaccctccagatacgattcacttttcacaacattttctacacactctttcttagttccattagtgacttgagc 28723842  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtacc 435  Q
    |||  | ||| ||||||||| |  | || |||||||||||||| |||| ||||| |||| |||||    
T  28723843 gttggattgccaacgtgcctattagcacatttcgttccaccgcgaagactcattgccaccgtacc 28723907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 28715467 - 28715551
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgact 365  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28715467 taagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttatacacactctttctcagttccattactgact 28715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 2311813 - 2311918
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||  ||| || |||| |||||||||  |||||    
T  2311813 taagggtgacattgcttcaccctcaaggtatgattcacctttcacaacactttctacacattctttctcaaatcccttgctgatttgagcgttggagtgc 2311912  T
Q  381 taacgt 386  Q
    ||||||    
T  2311913 taacgt 2311918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 20622520 - 20622393
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactt--tctacacactcttactcagttccattactgacttgagcgtttaagt 378  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||| || |||  |  ||||||||||||||||||  ||||    
T  20622520 taagggtgaacttgcttcaccctcaaggtatgattcacttttcacaccactttatctacacactatttctctatctcattactgacttgagcgtcaaagt 20622421  T
Q  379 gctaacgtgcctctaggaacctttcgtt 406  Q
    | |||| |||||  ||||||||||||||    
T  20622420 gttaacatgcctgcaggaacctttcgtt 20622393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 492 - 631
Target Start/End: Complemental strand, 13932848 - 13932709
Alignment:
Q  492 ctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcct 591  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||  | |||| |||||||| ||||  | |||| |||||  || ||||    
T  13932848 ctcactagacatatcatttgacgctagaaggaggggatcattcgctaaccgccacattctaacgatcctccaccgtaacctttttttgttacgcgatcct 13932749  T
Q  592 ctgccgtaaccgttttttgttacacgttcctccatcgcaa 631  Q
    | ||| ||||||||||  |||||||||||||||| |||||    
T  13932748 ccgccttaaccgttttcagttacacgttcctccaccgcaa 13932709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 158 - 418
Target Start/End: Complemental strand, 1771059 - 1770800
Alignment:
Q  158 ctcaagtgcaccgcgccacaaagtagcgcgcccgc-cgcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaaga 256  Q
    ||||||||||| | |||||| || || |||||| | ||||||||||||| |||  |||||||||| || |||||||||| || ||||| || ||| |       
T  1771059 ctcaagtgcactgtgccacatagaagtgcgcccccgcgcgaggatcaccttac--gtgtcctcta-tcgtccctaatcatacgccgcataattcggagac 1770963  T
Q  257 gtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggt--atgattcacttttcacaacactttctacacactcttactcagttc 354  Q
    | |||| |  ||| ||| ||||| |||||| || ||||||||| ||||||||   ||||| |||||||||||||||||||||||||||||| ||||||||    
T  1770962 ggttatgcacaacgcgcacctatataagggcgaacttgcttcatcctcaaggcgcatgat-cacttttcacaacactttctacacactcttcctcagttc 1770864  T
Q  355 cattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaaga 418  Q
    ||||||| ||||||||||   ||| ||||| ||| |  ||  ||||||| ||||||||||||||    
T  1770863 cattactaacttgagcgtcggagtactaacatgcttgcagacacctttccttccaccgcaaaga 1770800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 8122894 - 8123002
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| | | ||  ||| || |||||||||||||||||||  |||||    
T  8122894 taagggtgacattgcttcaccctcaaggtatgattcacttttcacaacgctttcgacatagt-tttttcaatttcattactgacttgagcgttggagtgc 8122992  T
Q  381 taacgtgcct 390  Q
    ||||||||||    
T  8122993 taacgtgcct 8123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 275 - 411
Target Start/End: Complemental strand, 12516303 - 12516167
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||| ||||| ||||||||||||||||||||    ||||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||||      
T  12516303 cctatataaaggtgaacttgcttcaccctcaaggtacatatcacttttcacaacacttattacacaatctttctcagttccattactaacttgagcgtcg 12516204  T
Q  375 aagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
     |||||||||||| ||  ||| |||||||||| ||||    
T  12516203 gagtgctaacgtgtctgcaggcacctttcgtttcacc 12516167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 14860068 - 14860220
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||  |||| ||| || ||||||||||||||||| |||||     
T  14860068 cgcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacaaactgtttctcagttccattactgagttgaga 14860167  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
     |   |||||||| ||||||  | | ||||||||||||||| | |||||||||    
T  14860168 atcagagtgctaatgtgcctgcaagcacctttcgttccaccacgaagattcat 14860220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 292 - 418
Target Start/End: Original strand, 17485614 - 17485740
Alignment:
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctc 391  Q
    |||||||||||||||||||  ||||| ||| ||||||| | ||||||||||| | |||| ||||||||||||||||||||||   ||||||| |||||      
T  17485614 ttgcttcaccctcaaggtactattcattttacacaacattctctacacactccttctcaattccattactgacttgagcgttggggtgctaatgtgccca 17485713  T
Q  392 taggaacctttcgttccaccgcaaaga 418  Q
     ||  ||||||||||||||||| ||||    
T  17485714 cagacacctttcgttccaccgcgaaga 17485740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 12731540 - 12731631
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||||| |||||||||||||||||||     ||||||||||||||||||  || |||||||| ||||||||||||| |||| |||||||    
T  12731540 taagggtgaacttgcttcaccctcaaggttcacatcacttttcacaacacttcttatacactctttctcagttccattaatgacgtgagcgt 12731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 373
Target Start/End: Original strand, 13085073 - 13085144
Alignment:
Q  302 ctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||||| ||||||||||||||||| |||||||||| | |||| ||||||| ||||| |||||||||||||    
T  13085073 ctcaaggtttgattcacttttcacaatactttctacatattctttctcagtttcattattgacttgagcgtt 13085144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 423
Target Start/End: Complemental strand, 21649459 - 21649383
Alignment:
Q  347 ctcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    |||||||||||||||||||||| ||||   |||||||||||| |  ||| ||||||||||||||||| |||| ||||    
T  21649459 ctcagttccattactgacttgatcgttggggtgctaacgtgcttgcaggcacctttcgttccaccgcgaagactcat 21649383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 6109650 - 6109741
Alignment:
Q  299 accctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 390  Q
    ||||||||| | |||||||||||||||||||||||||  ||| |  |  ||||||| ||||||||||| || |||  |||||||||||||||    
T  6109650 accctcaagatgtgattcacttttcacaacactttctttacatttgttttcagttcgattactgacttaagtgttggagtgctaacgtgcct 6109741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 13933042 - 13932968
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    ||||||||  ||||||||||||||||||||||||| |||| || |||  ||  ||||||| ||||||||||||||    
T  13933042 cttcacccctaaggtatgattcacttttcacaacattttcaacccacattttatcagttcaattactgacttgag 13932968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 369
Target Start/End: Complemental strand, 25496059 - 25495962
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    |||||||| ||||||||| ||||||||||| | ||||||    ||||||||  |||| |||  ||||||||||| |||||||  ||||||||||||||    
T  25496059 gcgcctatataagggtgaacttgcttcacctttaaggtacacatcacttttttcaactcttcttacacactctttctcagtttgattactgacttgag 25495962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 20622710 - 20622634
Alignment:
Q  92 aatcacacgttgacatgtagcctaa-ttacaccgctataaggctccgctcctgaaggaacacgccatctcaagtgca 167  Q
    ||||||||||| |||||| || ||| |||||||||| ||||||||||| ||||| | | ||||||| ||||||||||    
T  20622710 aatcacacgttaacatgtggcataacttacaccgctttaaggctccgcgcctgaggtagcacgccaactcaagtgca 20622634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 20118946 - 20118985
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  20118946 cgcgcctatataagggtgaacttgcttcaccctcaaggta 20118985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 21652719 - 21652652
Alignment:
Q  316 cacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaa 383  Q
    |||||| || |||||||  |||||| |||  || |||||||||||||||||||| |||||||||||||    
T  21652719 cactttccataacacttcttacacattctctcttagttccattactgacttgagagtttaagtgctaa 21652652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 9781519 - 9781573
Alignment:
Q  315 tcacttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    ||||||||||||||||||  |||||||||||  |||||| ||||||||| |||||    
T  9781519 tcacttttcacaacacttcttacacactctttttcagttacattactgatttgag 9781573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 12108538 - 12108502
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggta 310  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  12108538 gcctatataagggtgaacttgcttcaccctcaaggta 12108502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 539
Target Start/End: Complemental strand, 17396629 - 17396589
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaa 539  Q
    |||| |||||||| |||||||||||||| ||||||||||||    
T  17396629 gacagatcatttggcgctagaaggagggaatcgttcgctaa 17396589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 24734884 - 24734840
Alignment:
Q  24 tgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  24734884 tgctagcaacactctcttttgaacactctctctaatactcactct 24734840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 41451896 - 41451940
Alignment:
Q  24 tgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  41451896 tgctagcaacactctcttttgaacactctctctaatactcactct 41451940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 88; Significance: 6e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 272 - 582
Target Start/End: Complemental strand, 379837 - 379527
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| || |||||| ||||||||||||||||||||    ||||||||||||||||||  ||||||||||| |||||||||||||||||||| || |    
T  379837 gcgcctatatacgggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcagttccattactgacttcagtg 379738  T
Q  372 tttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatcac-gtcacaccggagcaattttacgc 470  Q
    |  ||||||||||||||||  | | ||||||||||||||||| |||| ||||   | | ||||| ||| |  | || ||||||||||||| ||| |  ||    
T  379737 tcaaagtgctaacgtgcctagatgcacctttcgttccaccgcgaagactcatcgtcgccgtaccggaagctgttacagtcacaccggagc-attctctgc 379639  T
Q  471 caccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtact 570  Q
    |||  |||| ||||| || | || ||  ||||||||||||| ||||||||||||||||||||||||||||  |||||||  ||| |||||||| ||||      
T  379638 cactgttgccactcaaccgttcttaccggacatatcatttggcgctagaaggaggggatcgttcgctaaccgccacggtccaacgatcctccaccgtaac 379539  T
Q  571 cgttttctgtta 582  Q
    | ||||||||||    
T  379538 cattttctgtta 379527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 120980 - 121144
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| |||||||||  |||||||||||||||||||    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||    
T  120980 cgcgcctatataagggtgaatttgcttcaccctcaaggtacacatcacttttcacaacactttatacacactctttctcagttccattactgacttaagc 121079  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtacc 435  Q
     |   ||| ||||||||  |||||| ||||||| ||||||||||||| |||||| |||| |||||    
T  121080 atcagagtactaacgtgtttctaggcacctttcattccaccgcaaagcttcattgccaccgtacc 121144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 30477761 - 30477646
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  30477761 cgcctatataagggtgacattacttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagtttcgttactgacttgagcgt 30477662  T
Q  373 ttaagtgctaacgtgc 388  Q
    |  |||||||||||||    
T  30477661 tggagtgctaacgtgc 30477646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 195 - 447
Target Start/End: Complemental strand, 18323141 - 18322889
Alignment:
Q  195 cgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttg 294  Q
    |||||||||  ||||  ||||||||||| | ||||||||||||| |||| |||| || | |   |||| || |||||  |||||| ||||||||||||||    
T  18323141 cgaggatcatgctacgtgtgtcctctaaccatccctaatcacacgccgcgaaacccggaggcagttattctcaactcttgcctatataagggtgaccttg 18323042  T
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctag 394  Q
    ||||| |||||| |||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||  |||| |||| || ||  |     
T  18323041 cttcatcctcaatgtatgattcacttttcacaacattttctacacaatctttctcagttctattactgacttgagcgttggagtgttaacatgtctgcat 18322942  T
Q  395 gaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatcac 447  Q
    | |||||| |||||||||| |||| || | ||| | |||||  ||||||||||    
T  18322941 gcaccttttgttccaccgcgaagactcgtcaccgccgtaccgaaaaccatcac 18322889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 226 - 409
Target Start/End: Original strand, 26916822 - 26917005
Alignment:
Q  226 tccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac 325  Q
    ||||||||||||| |||||||||  | | | | |||| || ||| ||||||||| |||||| ||| ||||||||  |||||||||||| |||||||||||    
T  26916822 tccctaatcacacgccgcaaaacctggaggcggttattctcaacgcgcgcctatataagggcgacattgcttcatgctcaaggtatgactcacttttcac 26916921  T
Q  326 aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttcca 409  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||   | ||||||||||||  | | |||||||||||||    
T  26916922 aacactttctacacactctctctcagttccattactgacttgagcgttagtgcgctaacgtgcctaaatgcacctttcgttcca 26917005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 496
Target Start/End: Complemental strand, 24507555 - 24507355
Alignment:
Q  295 cttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctag 394  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||| |||||||| ||||  ||| ||||||||| |  ||    
T  24507555 cttcaccctcaaggtatgattcacttttcacaacactttctagacactctttctcatttccattattgacttgatcgttggagtactaacgtgcatgcag 24507456  T
Q  395 gaacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatca-cgtcacaccggagcaattttacgccaccattgctactcatccatcct 493  Q
      |||||||| ||||||||||||| |||||||| | ||||| |||||| ||| |||||||| ||||| ||| | || |||| ||||  ||||||||||||    
T  24507455 acacctttcgctccaccgcaaagactcattaccgccgtacc-gaaaccgtcaccgtcacactggagc-attatccgtcaccgttgcctctcatccatcct 24507358  T
Q  494 cac 496  Q
    |||    
T  24507357 cac 24507355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 6928084 - 6928174
Alignment:
Q  296 ttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgt 386  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||    
T  6928084 ttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagtgttgaaatgctaacgt 6928174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 271 - 427
Target Start/End: Original strand, 3459453 - 3459608
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac-aacactttctacacactcttactcagttccattactgacttgag 369  Q
    ||||||||| ||||||||| ||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3459453 cgcgcctatataagggtgaacttgcttcacc-tcaaggtacgatttacttttcaccaacactttctacacactcttgctcagttccattactgacttgag 3459551  T
Q  370 cgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattacc 427  Q
    ||    |||||||||||||||  ||| ||||||||  ||||||| |||| ||||||||    
T  3459552 cgccggagtgctaacgtgcctgcaggcacctttcg-cccaccgcgaagactcattacc 3459608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 212 - 367
Target Start/End: Original strand, 17698195 - 17698350
Alignment:
Q  212 gtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtat 311  Q
    ||||||| ||| | ||||||||||||| |||| ||| |||||   | |||| ||  || ||||||||| || ||||| ||||||||||||||||| ||||    
T  17698195 gtgtcctttaaccgtccctaatcacacgccgctaaattcgaagacggttatgctcgacgcgcgcctatatatgggtggccttgcttcaccctcaaagtat 17698294  T
Q  312 gattcacttttcacaacactttctacacactcttactcagttccattactgacttg 367  Q
     ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  17698295 aattcacttttcacaacactttctacacactctttctcggttccattactgacttg 17698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 274 - 389
Target Start/End: Complemental strand, 13754877 - 13754762
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| |||| ||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| |    
T  13754877 gcctatataagagtgacttagcttcaccctcaaggtaggattcactttacacaacactttctacacactctttctcagtttcattactgacttgagcgat 13754778  T
Q  374 taagtgctaacgtgcc 389  Q
      |||| |||||||||    
T  13754777 gtagtgttaacgtgcc 13754762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 21416849 - 21416746
Alignment:
Q  282 aagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgct 381  Q
    |||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||    
T  21416849 aagggtgaacttgcttcacccttaaggtacgattcatttttcacaacactttctacacactctttctcagtttcattactgacttgagcgtcggagtgct 21416750  T
Q  382 aacg 385  Q
    ||||    
T  21416749 aacg 21416746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 410
Target Start/End: Complemental strand, 5860014 - 5859798
Alignment:
Q  194 gcgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacctt 293  Q
    ||||||||||| ||||||||||| | ||| | ||||||||||| | ||||||||  |  | | | ||||    ||| ||||||||| |||||||||||||    
T  5860014 gcgaggatcactctacacgtgtcatttaaccgtccctaatcactcgccgcaaaatccagaggcggttatttccaacgcgcgcctatataagggtgacctt 5859915  T
Q  294 gcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctcta 393  Q
    ||||||  ||||||||| ||||||||| ||| |||||| || ||||||| || || |||||||||| |||||||||||||  |||||||||||| ||  |    
T  5859914 gcttcaatctcaaggtacgattcacttctcaaaacactctcaacacactatttcttagttccattattgacttgagcgttggagtgctaacgtgtctgca 5859815  T
Q  394 ggaacctttcgttccac 410  Q
    |||| ||||||| ||||    
T  5859814 ggaatctttcgtcccac 5859798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 281 - 423
Target Start/End: Original strand, 17927683 - 17927825
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||||||| | |||||||||||| |||||||||||||| ||||| ||||||||||||| ||||   |||||||||||||||||||| ||||||  |||||    
T  17927683 taagggtggcattgcttcacccttaaggtatgattcacctttcataacactttctacatactcaatctcagttccattactgacttaagcgttggagtgc 17927782  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    |||||||| |  | | ||||||||| ||||| |||||| ||||    
T  17927783 taacgtgcatgcatgcacctttcgtcccaccacaaagagtcat 17927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 226 - 438
Target Start/End: Complemental strand, 23269401 - 23269201
Alignment:
Q  226 tccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcac 325  Q
    |||||| |||||| | |||||||||| |   | ||||||| ||| ||||||||| || ||||||| ||||||||||||||||||| ||||||||||        
T  23269401 tccctattcacacgctgcaaaactcggagacggttatcctcaacacgcgcctatatatgggtgacattgcttcaccctcaaggtacgattcacttt---- 23269306  T
Q  326 aacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcatta 425  Q
            ||||||||||||  ||||||||||||||||||| || |||  ||||||||| ||||| |||  |||||||||||||||||||||| ||||      
T  23269305 --------ctacacactctttatcagttccattactgacttaagtgttggagtgctaacttgcctgtagacacctttcgttccaccgcaaagactcatcg 23269214  T
Q  426 ccactgtaccaga 438  Q
    |||| ||||||||    
T  23269213 ccaccgtaccaga 23269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 423
Target Start/End: Complemental strand, 15058147 - 15058005
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    |||| ||||| ||| |||||||||||||||||||| | ||||||| |||||||||||||| | || |||| || ||||||| ||||| |||||  |||||    
T  15058147 taagtgtgacgttgtttcaccctcaaggtatgatttatttttcaccacactttctacacattttttctcaatttcattactaacttgtgcgttgtagtgc 15058048  T
Q  381 taacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    ||||||||||  | | ||||||||||||||| |||||| ||||    
T  15058047 taacgtgcctgcatgcacctttcgttccaccacaaagactcat 15058005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 368
Target Start/End: Complemental strand, 13765189 - 13765014
Alignment:
Q  193 cgcgaggatcaccctacacgtgtcctctaatc-ttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgacc 291  Q
    ||||| ||||||| ||||||||| |||| | | |||| ||||||||  ||||||||||||||   | |||| || | | ||||| ||||||||||||||     
T  13765189 cgcgacgatcaccatacacgtgttctcttaccgttccttaatcacagaccgcaaaactcgaagacggttattctca-cgcgcgcttatttaagggtgact 13765091  T
Q  292 ttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttga 368  Q
    | |||||||| |||||  || ||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  13765090 tagcttcaccttcaagacattattcactttacacaacactttctacacactctttctcagtttcattactcacttga 13765014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 632
Target Start/End: Complemental strand, 13754690 - 13754540
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgtt 581  Q
    |||||||||||||||  || | ||||||||  |||||||||||||||||||||||||||  ||||||| |||| ||| |||||||||  |||||||||||    
T  13754690 ctcatccatcctcaccggaaaaatcatttggtgctagaaggaggggatcgttcgctaaccgccacggtctaacgatcatccatcgtaaccgttttctgtt 13754591  T
Q  582 atacgttcctctgccgtaaccgttttttgttacacgttcctccatcgcaac 632  Q
    |   | |||||  || |||| |||||  |||||||||||||||| ||||||    
T  13754590 acgagctcctccaccataactgttttcagttacacgttcctccaccgcaac 13754540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 410
Target Start/End: Original strand, 24576555 - 24576691
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| ||| ||||||||||||||||    | ||||||||||||||||  ||||||||| |  | |||||||||||||||||||||||     
T  24576555 gcctatataagggtgaacttccttcaccctcaaggtacacattacttttcacaacacttcttacacactcatttttagttccattactgacttgagcgtc 24576654  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccac 410  Q
      |||| ||||||||||  ||| ||||||||||||||    
T  24576655 agagtgttaacgtgcctgcaggcacctttcgttccac 24576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 1909742 - 1909844
Alignment:
Q  336 acacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcattaccactgtacc 435  Q
    |||||||||| ||||||| |||||||||||| |||||| || |||||||||| ||  | | |||||||||||||| ||||||| || ||||||| |||||    
T  1909742 acacactctttctcagtttcattactgactttagcgttgaaatgctaacgtgtctgcatgcacctttcgttccactgcaaagactcgttaccaccgtacc 1909841  T
Q  436 aga 438  Q
    |||    
T  1909842 aga 1909844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 24070945 - 24070879
Alignment:
Q  301 cctcaaggt-atgattcacttttcacaacactttctacacactcttactcagttccattactgactt 366  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  24070945 cctcaaggttatgattcacttctcacaacactttctacacactctttcttagttccattactgactt 24070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 23497133 - 23497194
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacacttt 333  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  23497133 gcgcctatataagggtgactttgcttaaccctcaaggtatgattcactattcacaacacttt 23497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 469 - 622
Target Start/End: Original strand, 26917044 - 26917196
Alignment:
Q  469 gccaccattgctactcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
    |||||| ||||  |||||||||||||||  ||||||||||||| |||||||| || |||||||||||||||| ||||| || |||| ||||||||  |||    
T  26917044 gccaccgttgcctctcatccatcctcaccggacatatcatttggcgctagaatga-gggatcgttcgctaaccaccaccgtctaacgatcctccactgta 26917142  T
Q  569 ctcgttttctgttatacgttcctctgccgtaaccgttttttgttacacgttcct 622  Q
      | |||| |||||| || ||||| | ||||||| ||||  |||||| ||||||    
T  26917143 accattttatgttatgcgctcctccgacgtaaccattttcagttacatgttcct 26917196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 17319602 - 17319665
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttct 335  Q
    |||||||| ||| ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  17319602 gcgcctatataaaggtgaacttgcttcaccctcgaggcatgattcacttttcacaactctttct 17319665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 622
Target Start/End: Complemental strand, 13764263 - 13764122
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgt-actcgttttctgt 580  Q
    |||||||||||||| | |||| |||||||   ||||||||| |||||||||||||||||  ||||| | |||  |||||||| ||| |||  |||| |||    
T  13764263 ctcatccatcctcattggacaaatcattttgggctagaaggtggggatcgttcgctaaccgccacgatataatgatcctccaccgtaactgtttttttgt 13764164  T
Q  581 tatacgttcctctgccgtaaccgttttttgttacacgttcct 622  Q
    |||  | ||||||| |||||| |||||  |||||||||||||    
T  13764163 tatgagctcctctgtcgtaactgttttcagttacacgttcct 13764122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 414
Target Start/End: Original strand, 4565362 - 4565505
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||| ||| ||||||||| ||||||||||||||||||||     |||||||||||||||||  || ||  |||   |||||| ||||||| ||||||      
T  4565362 cgcgcttatataagggtgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttatactttctctttcagtttcattactaacttgatt 4565461  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgca 414  Q
    ||   ||||||||| |||||  ||  ||||||||||||||||||    
T  4565462 gtcggagtgctaacatgcctgcagacacctttcgttccaccgca 4565505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 7220648 - 7220617
Alignment:
Q  307 ggtatgattcacttttcacaacactttctaca 338  Q
    ||||||||||||||||||||||||||||||||    
T  7220648 ggtatgattcacttttcacaacactttctaca 7220617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 14667040 - 14667075
Alignment:
Q  504 atcatttgacgctagaaggaggggatcgttcgctaa 539  Q
    |||||||| |||||||||||||||||||||||||||    
T  14667040 atcatttggcgctagaaggaggggatcgttcgctaa 14667075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 7220586 - 7220553
Alignment:
Q  328 cactttctacacactcttactcagttccattact 361  Q
    |||||||||||||||||| |||||||||||||||    
T  7220586 cactttctacacactctttctcagttccattact 7220553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 16983573 - 16983529
Alignment:
Q  24 tgctagcaacactatcttttaaacactatctctaatcctcactct 68  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  16983573 tgctagcaacactctcttttgaacactctctctaatactcactct 16983529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 198 - 413
Target Start/End: Complemental strand, 14117 - 13902
Alignment:
Q  198 ggatcaccctacacgtgtcctctaatcttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgctt 297  Q
    |||||||| ||| ||||||||||||   ||||||||||||| |||||||||  | | | | |||| |  ||  | | ||||| ||||||||| |||||||    
T  14117 ggatcaccatacgcgtgtcctctaacggtccctaatcacacaccgcaaaacctggaggcggttattcccaatgcacacctatataagggtgatcttgctt 14018  T
Q  298 caccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaa 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||| ||  ||| ||||||||| |  | | |    
T  14017 caccctcaaggtatgattcacttctcacaacactttctacacactctttctcagtttcattactgacttgagctttggagtactaacgtgcattcatgca 13918  T
Q  398 cctttcgttccaccgc 413  Q
    |||||||| |||||||    
T  13917 cctttcgtcccaccgc 13902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 387
Target Start/End: Original strand, 15403 - 15515
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttt 374  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||      
T  15403 cctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctagatactctttctcagttccattactgactggagcgtcg 15502  T
Q  375 aagtgctaacgtg 387  Q
     ||||||||||||    
T  15503 gagtgctaacgtg 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 592
Target Start/End: Original strand, 8571 - 8866
Alignment:
Q  296 ttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctagg 395  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||  ||||||||||||| ||  |      
T  8571 ttcacccttaaggtatgattcacttttcacaacactttctacacactgtttttcagtttcattactgacttgagcgtcgaagtgctaacgtg-ctgcaaa 8669  T
Q  396 aacctttcgttccaccgcaaagattcattaccactgtaccagaaaccatcac-gtcacaccggagcaattttacgccaccattgctactcatccatcctc 494  Q
     ||||||  |||||||||||||| |||   || | ||||  |||||  | || |||||| |||||| ||| | ||||||| |||  ||||||| ||||||    
T  8670 caccttttattccaccgcaaagactcaacgccgccgtactggaaactgttactgtcacagcggagc-attatccgccaccgttgtcactcatctatcctc 8768  T
Q  495 actagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctc 592  Q
    |  ||| | |||||||  | ||||||||||| ||||||||| | |   ||||||| |||  ||||||||||||| |||||||||||||| || |||||    
T  8769 atcagatagatcatttatcactagaaggaggagatcgttcgttgatcgccacggtctaatgatcctccatcgtaatcgttttctgttatgcgctcctc 8866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 6419 - 6301
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    |||||||| ||||| ||| |||||||||| ||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||||     
T  6419 gcgcctatataaggatgaacttgcttcacgctcaaggtacgactcacttttcacaacactttctacacactatttctcagttccattactgacttgagct 6320  T
Q  372 tttaagtgctaacgtgcct 390  Q
    |  ||||||||||||||||    
T  6319 tcgaagtgctaacgtgcct 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 276 - 412
Target Start/End: Complemental strand, 8002 - 7866
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| ||| |||||| ||| ||||| |||||  ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||||||      
T  8002 ctatataatggtgacattgtttcacactcaaattatgattcacttttcacaacactttctacacactctttctcaattgcattactgatttgagcgttag 7903  T
Q  376 agtgctaacgtgcctctaggaacctttcgttccaccg 412  Q
    |||||||||||||||  | | ||||||| ||||||||    
T  7902 agtgctaacgtgcctacatgcacctttccttccaccg 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 7817 - 7674
Alignment:
Q  482 ctcatccatcctcactagacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgtt 581  Q
    |||||||||||||||| |||| |||||||| |||||||| ||||||||||||| |||||  |||| || |||| ||||||||  |||  |||||||| ||    
T  7817 ctcatccatcctcactggacagatcatttggcgctagaaagaggggatcgttctctaacctccacagtctaacgatcctccactgtaaccgttttctatt 7718  T
Q  582 atacgttcctctgccgtaaccgttttttgttacacgttcctcca 625  Q
    || || ||||| ||||||||||||||  ||||| | ||||||||    
T  7717 atgcgctcctcggccgtaaccgttttcagttacgcattcctcca 7674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 211 - 326
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgat-tcacttttcacaacactttctacacactcttactcagttccattactgacttgag 369  Q
    ||||||||  ||||||||| ||||||||||||||||||||   | ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  211 cgcgcctagataagggtgaacttgcttcaccctcaaggtacattctcacttttcacaacacttcttacacactctttctcagttccattactgacttgag 310  T
Q  370 cgtttaagtgctaacg 385  Q
    |||   ||||||||||    
T  311 cgtcggagtgctaacg 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 73771 - 73917
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    ||||||||| ||  ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||  |||  ||||||||| | ||||||    
T  73771 cgcgcctatatattggtgaacttgcttcaccctgaaggtatgatttacttttcacaacactttctacgcactctttttcaaatccattactaatttgagc 73870  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaag 417  Q
    ||   ||||||||| |||||  | | |||||| ||||||||||||||    
T  73871 gtcagagtgctaacatgcctgaatgcaccttttgttccaccgcaaag 73917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 22998 - 22869
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||  |||||||  || ||||||||||||||||||||||||||   |||||    
T  22998 taagggtgaacttgcttcaccctcaaggtacacgtcacttttcacaacacttcttacacacgatttctcagttccattactgacttgagcgtcagagtgc 22899  T
Q  381 taacgtgcctctaggaacctttcgttccac 410  Q
    |||||||||   ||| ||||||||| ||||    
T  22898 taacgtgcccgcaggcacctttcgtcccac 22869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 10884 - 11036
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||| |||| ||| ||||| |||| |||||||||||||||    ||||||||||||||||||  ||||||||||   |||||||||||| ||||||||||    
T  10884 cgcgtctatataaaggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactctctttcagttccattattgacttgagc 10983  T
Q  371 gtttaagtgctaacgtgcctctaggaacctttcgttccaccgcaaagattcat 423  Q
    |||  |||||||||||||||  |   |||||| ||||||||||| ||||||||    
T  10984 gttggagtgctaacgtgcctgcatacaccttttgttccaccgcagagattcat 11036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 390
Target Start/End: Complemental strand, 40916 - 40799
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    |||||||  |||||||| ||||||||||||||||||||    |||||||||| ||||||| |||||| ||||   |||||||||| ||||||||||||||    
T  40916 cgcctataaaagggtgaacttgcttcaccctcaaggtacacatcacttttcataacacttcctacactctctctttcagttccatcactgacttgagcgt 40817  T
Q  373 ttaagtgctaacgtgcct 390  Q
    |  |||||||||||||||    
T  40816 tggagtgctaacgtgcct 40799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 310 - 423
Target Start/End: Original strand, 29286 - 29397
Alignment:
Q  310 atgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttcca 409  Q
    ||||||||||||||||||||||||||||||  |||| || | || |||||||||||||||||||  ||||||||| || ||| | | |||||||||||||    
T  29286 atgattcacttttcacaacactttctacac--tcttccttattttcattactgacttgagcgttggagtgctaacatgactccatgcacctttcgttcca 29383  T
Q  410 ccgcaaagattcat 423  Q
    |||| |||| ||||    
T  29384 ccgcgaagactcat 29397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 24826 - 24870
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgatt 315  Q
    ||||||||| ||||| |||| |||||||| |||||||||||||||    
T  24826 cgcgcctatataaggttgacattgcttcaacctcaaggtatgatt 24870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 35353 - 35256
Alignment:
Q  294 gcttcaccctcaaggtatgattcactttt-cacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 390  Q
    ||||| ||||||| | ||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||| ||   |||||||||||||||    
T  35353 gcttccccctcaaaggatgattcactttttcacaacactttccacacactctttctcagttccgttactgacttgagtgtcagagtgctaacgtgcct 35256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 35132 - 35078
Alignment:
Q  514 gctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgta 568  Q
    ||||||||||||||||| ||||||||| | |||||| |||| |||||||| ||||    
T  35132 gctagaaggaggggatccttcgctaaccaacacggtctaacgatcctccaccgta 35078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 10431 - 10562
Alignment:
Q  500 acatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctccatcgtactcgttttctgttatacgttcctctgccgta 599  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||||||||  ||| |||||||| | ||  | ||||||||||  ||   ||| ||| ||    
T  10431 acatatcatttgacgctataaggaggggatcgttcactaaccaccacggtccaactatcctccaccataaccattttctgttacgcgcatctccgccata 10530  T
Q  600 accgttttttgttacacgttcctccatcgcaa 631  Q
    ||||||||  |||||||||||||||| |||||    
T  10531 accgttttcagttacacgttcctccaacgcaa 10562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 215389 - 215275
Alignment:
Q  276 ctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgttta 375  Q
    |||| ||||| ||| ||||||||||||||||||||     |||||||||||||||||  ||||||||||   |||||| |||||||||||||||||||      
T  215389 ctatataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcgttgg 215290  T
Q  376 agtgctaacgtgcct 390  Q
    | |||||||||||||    
T  215289 attgctaacgtgcct 215275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 274 - 411
Target Start/End: Original strand, 4396 - 4533
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| ||||||||||||||||||||    ||| |||||| |||||||  ||||| ||||   |||||| ||||| |||||||||||||    
T  4396 gcctatataagggtgaacttgcttcaccctcaaggtacacatcatttttcataacacttcttacactctctctttcagtttcattagtgacttgagcgtt 4495  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
      ||||||||||||| |  ||  |||||||||||||||    
T  4496 ggagtgctaacgtgcttgcagacacctttcgttccacc 4533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 6830 - 6930
Alignment:
Q  272 gcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcg 371  Q
    ||||||||  |||||||| |||| |||||||||||||||    ||||||||||||||||||  ||||||||| | ||||||| || ||||||||||||||    
T  6830 gcgcctatacaagggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactcgttctcagtttcaatactgacttgagcg 6929  T
Q  372 t 372  Q
    |    
T  6930 t 6930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 20510 - 20608
Alignment:
Q  315 tcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcctctaggaacctttcgttccaccgc 413  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||| ||||||||||||   ||||||||| ||  | || | |||||||||||||||||    
T  20510 tcacttttcataacattttctacacactctttctcagttcctttagtgacttgagcgtcagagtgctaacatgtttgtaagcacctttcgttccaccgc 20608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 21587 - 21705
Alignment:
Q  271 cgcgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagc 370  Q
    |||| |||| |||||||||  |||||||||||||||||||    ||||||| ||||||||||  || |||||||   |||||| || ||||||||||||     
T  21587 cgcgtctatgtaagggtgaatttgcttcaccctcaaggtacacatcactttccacaacacttcttaaacactctctttcagtttcaatactgacttgagt 21686  T
Q  371 gtttaagtgctaacgtgcc 389  Q
    |||  ||||||||||||||    
T  21687 gttggagtgctaacgtgcc 21705  T

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Target: scaffold0464 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 411
Target Start/End: Complemental strand, 11624 - 11498
Alignment:
Q  281 taagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtttaagtgc 380  Q
    ||||||||| |||| ||||||||||||||   || |||||||||||||||||   | |||||||| ||||||||||||| |||  ||||||||  |||||    
T  11624 taagggtgaacttggttcaccctcaaggtcacat-cacttttcacaacactt---atacactctttctcagttccattaatgaggtgagcgttggagtgc 11529  T
Q  381 taacgtgcctctaggaacctttcgttccacc 411  Q
    |||| ||  | |||| ||| |||||||||||    
T  11528 taacatggttgtaggcaccattcgttccacc 11498  T

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Target: scaffold0101 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 10704 - 10764
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttct 335  Q
    ||||| ||| ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  10704 cctatataaaggtgaacttgcttcaccctcgaggcatgattcacttttcacaactctttct 10764  T

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Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 49120 - 49184
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctcca 563  Q
    ||||| ||||||| ||||||||||||||||||||||||||||  |||||||  |||| |||||||    
T  49120 gacatgtcatttggcgctagaaggaggggatcgttcgctaaccgccacggtccaacattcctcca 49184  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 62568 - 62632
Alignment:
Q  499 gacatatcatttgacgctagaaggaggggatcgttcgctaactaccacggtttaacaatcctcca 563  Q
    ||||| ||||||| ||||||||||||||||||||||||||||  |||||||  |||| |||||||    
T  62568 gacatgtcatttggcgctagaaggaggggatcgttcgctaaccgccacggtccaacattcctcca 62632  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 415
Target Start/End: Complemental strand, 42367 - 42227
Alignment:
Q  274 gcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgtt 373  Q
    |||||| ||||||||| ||||||||||||||||||||     |||||||||||||||||   | ||  |  || |||||||||||| |||||||| |||     
T  42367 gcctatataagggtgaacttgcttcaccctcaaggtacacaacacttttcacaacacttataatacttttcta-tcagttccattattgacttgatcgtc 42269  T
Q  374 taagtgctaacgtgcctctaggaacctttcgttccaccgcaa 415  Q
     ||||||||| ||||||  ||  |||||||||| ||||||||    
T  42268 gaagtgctaatgtgcctgcagccacctttcgtttcaccgcaa 42227  T

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Target: scaffold0479 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 5156 - 5078
Alignment:
Q  275 cctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagtt 353  Q
    ||||| ||||||||| |||||||||||||||||||     ||||||||||||||||||  ||||||  ||| |||||||    
T  5156 cctatataagggtgaacttgcttcaccctcaaggttcacgtcacttttcacaacacttcttacacaacctttctcagtt 5078  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 69197 - 69333
Alignment:
Q  273 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 372  Q
    ||||||| |||||||||| | |||||| || || ||||||||||| ||||| || ||||||  ||||| ||   |||| ||||   ||||||||||||||    
T  69197 cgcctatataagggtgacatagcttcagcc-cagggtatgattcaattttccca-cacttttcacacattccatctcatttcctacactgacttgagcgt 69294  T
Q  373 ttaagtgctaacgtgcctctaggaacctttcgttccacc 411  Q
    |  |||||||||||||||  ||| |||||| ||||||||    
T  69295 tggagtgctaacgtgcctgcaggcaccttttgttccacc 69333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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