View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12261_low_19 (Length: 302)
Name: NF12261_low_19
Description: NF12261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12261_low_19 |
 |  |
|
| [»] scaffold0041 (1 HSPs) |
 |  |  |
|
| [»] scaffold0070 (2 HSPs) |
 |  |  |
|
| [»] scaffold0060 (2 HSPs) |
 |  |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (1 HSPs) |
 |  |  |
|
| [»] scaffold0484 (2 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
| [»] scaffold0182 (1 HSPs) |
 |  |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
| [»] scaffold0628 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 27257288 - 27257429
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
27257288 |
acacccccactatataaacactactaatgtgtgatccatctgatgtgggacttccacttttttcaattcacactacactagttctacccattgtgggaat |
27257387 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
27257388 |
ttgtgtttagtcaattactcaatttccacatatgttccaaca |
27257429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 40864424 - 40864280
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn--caattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| | |
|
|
| T |
40864424 |
acacctccactatataaacactactaatgtgtgatccatccgatctgggacttccatttttttttcaattcacactacactagttctacccattgtggga |
40864325 |
T |
 |
| Q |
122 |
atttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
40864324 |
atttgtgtttagtcaattactcaatttccacatatgttccaacaa |
40864280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 40864038 - 40863959
Alignment:
| Q |
87 |
caattcacactacactagttctacccattatggaaatttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
40864038 |
caattcacactacactagttctacccattgtgggaatttgtgtttagtcaattactcaatttccacatatgttccaacaa |
40863959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 9649980 - 9649844
Alignment:
| Q |
32 |
actatataaacactactaatgtgtga--ttcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgt |
129 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||| | ||||||| |||||||||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
9649980 |
actatataaacactactaatgtgtgtatttcatccgatgtggaacttccacttttttcaattcacacaacactagttctacccaacatgggaatttgtgt |
9649881 |
T |
 |
| Q |
130 |
ttagtcaatt-actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||| || ||||||||||| | ||||||||||| |
|
|
| T |
9649880 |
ttagtcttttaactcaatttccacacatgttccaaca |
9649844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 11016858 - 11016794
Alignment:
| Q |
101 |
ctagttctacccattatggaaatttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
11016858 |
ctagttctacctattatgggaatttgtatttagtcaattactcaatttccacacatgttccaaca |
11016794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 23866792 - 23866902
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn-caattcacactacactagttctacccattatggaaa |
122 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | |||| |||| ||||||||| |||||||||| |||||||||||||||| |||| || |
|
|
| T |
23866792 |
acacccccattatataaacactactaatgtgt--tccatccaatgtgggacttccactttttttcaattcacacaacactagttctacccaacatgggaa |
23866889 |
T |
 |
| Q |
123 |
tttgtgtttagtc |
135 |
Q |
| |
|
||||||||||||| |
|
|
| T |
23866890 |
tttgtgtttagtc |
23866902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 9010410 - 9010444
Alignment:
| Q |
19 |
tcatcacacccccactatataaacactactaatgt |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
9010410 |
tcatcacacccccactatataaacactactaatgt |
9010444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 19641358 - 19641397
Alignment:
| Q |
23 |
cacacccccactatataaacactactaatgtgtgattcat |
62 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19641358 |
cacacccccgctatataaacactactaatatgtgattcat |
19641397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 94; Significance: 7e-46; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 21323062 - 21322920
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
21323062 |
acacccccactatataaacactactaatgtgtgatccatccgatgtgggacttccacttttttcaattcacactacactagttctacccattgtgggaat |
21322963 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
21322962 |
ttgtgtttagtcaattactcaatttccacatatgttccaacaa |
21322920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 31732620 - 31732760
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||| ||||| ||| ||| |
|
|
| T |
31732620 |
acacccccactatataaacactactaatgtgtgatccatc-gatgtgggacttccatttttttcaattcacactacactagttctatccattgtgggaat |
31732718 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
31732719 |
ttgtgtttagtcaattactcaatttccacatatgttccaaca |
31732760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 13300511 - 13300405
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
13300511 |
acacccccactatataaacactactaatgtgtgatccatctgatgtgggacttccacttttttcaattcacactacactagttctacccattgtgggaat |
13300412 |
T |
 |
| Q |
124 |
ttgtgtt |
130 |
Q |
| |
|
||||||| |
|
|
| T |
13300411 |
ttgtgtt |
13300405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 24435199 - 24435061
Alignment:
| Q |
28 |
ccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgt |
127 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||| || || ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
24435199 |
ccccattatataaacactactaatgtgtgatccattcgaagtgagacttcc--ttttttcaattcacactacactagttctacccattgtgggaatttgt |
24435102 |
T |
 |
| Q |
128 |
gtttagtcaattactcaatttcctcgtatgttccaacaaaa |
168 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
24435101 |
gtttagtcaattactcaatttccacatatgttccaacaaaa |
24435061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 562535 - 562678
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| ||| |
|
|
| T |
562535 |
acacccccactatataaacactactaatgtgtgttccatccgatgtgggacttcca-ctttttcaattcacacaacactagttctacccaacatgggaat |
562633 |
T |
 |
| Q |
124 |
ttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
562634 |
ttgtgtttagtctttttaactcaatttccacacatgttccaacaa |
562678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 557763 - 557908
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
557763 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggga |
557861 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
557862 |
atttgtgtttagtctttttaactcaatttccacacatgttccaacaa |
557908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 41997709 - 41997822
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
41997709 |
acacccccaatatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttttcaattcacacaacactagttctacccaacatggga |
41997808 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
41997809 |
atttgtgtttagtc |
41997822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 2452036 - 2452149
Alignment:
| Q |
36 |
tataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn-caattcacactacactagttctacccattatggaaatttgtgtttagt |
134 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| | |||||||| ||||||| |||||| || |||||||| |||||| |||||||||||||| |
|
|
| T |
2452036 |
tataaacactactaatgtgtgatccatccgatatgagacttccactttttttcaattcatactacattaattctacccgttatgggaatttgtgtttagt |
2452135 |
T |
 |
| Q |
135 |
caattactcaattt |
148 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2452136 |
caattactcaattt |
2452149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 8041221 - 8041158
Alignment:
| Q |
87 |
caattcacactacactagttctacccattatggaaatttgtgtttagtcaattactcaatttcc |
150 |
Q |
| |
|
|||||||||||| ||||||| |||||| ||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
8041221 |
caattcacactatactagttgtacccactatggaattttgtatttagtcaattactcaatttcc |
8041158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 12044159 - 12044014
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| |||| |||||| || |||||||||| |||||||||||||||| |||| | |
|
|
| T |
12044159 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgagggactttcacttttttcaattcacacaacactagttctacccaacatggga |
12044060 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
12044059 |
atttgtgtttagtctttttaactcaatttccacacatgttccaaca |
12044014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 36941291 - 36941146
Alignment:
| Q |
24 |
acacccccactatataaacactactaatg--tgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | |||| ||||| ||||||||| ||||||||| |||||||||||||||| |||| | |
|
|
| T |
36941291 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca-ctttttcaattcacagaacactagttctacccaacatggga |
36941193 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
36941192 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaacaa |
36941146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 32460572 - 32460459
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| | ||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
32460572 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtggtacttccacttttttcaattcacacaacactagttctacccaacatggga |
32460473 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
32460472 |
atttgtgattagtc |
32460459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 36949819 - 36949880
Alignment:
| Q |
87 |
caattcacactacactagttctacccattatggaaatttgtgtttagtcaattactcaattt |
148 |
Q |
| |
|
||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||| |
|
|
| T |
36949819 |
caattcacactacactagttccgcctattatgagaatttgtgtttagttaattactcaattt |
36949880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 42002500 - 42002646
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| || | |
|
|
| T |
42002500 |
acaccctcaatatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttttcaattcacacaacactagttctacccaacatatga |
42002599 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
42002600 |
atttgtgtttagtctttttaactcaatttccacacatgttccaacaa |
42002646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 36936537 - 36936393
Alignment:
| Q |
24 |
acacccccactatataaacactactaatg--tgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| | ||| ||||| |||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
36936537 |
acacccctactatataaacactactaatgtgtgtgttccattcgatgtgagacttcca-ctgtttcaattcacacaacactagttctacccaacatggga |
36936439 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
36936438 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaaca |
36936393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 3666943 - 3667088
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||| ||||||||||||| || | |||| ||||| ||||||||| ||||| |||| |||||| |||||| || ||| |||| |
|
|
| T |
3666943 |
acacccccactata--aacactactaatgcttgttccatccgatgtgggacttccacctttttcaatttacacaacactatttctacacaacatgaaaat |
3667040 |
T |
 |
| Q |
124 |
ttgtgtttagtc-aattactcaatttcctcgtatgttccaacaaaaac |
170 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||||||||||| |||| |
|
|
| T |
3667041 |
ttgtgtttagtctttttactcaatttccacacatgttccaacataaac |
3667088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 89; Significance: 6e-43; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 3992794 - 3992653
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||| |||||||||||||||||| ||| ||| |
|
|
| T |
3992794 |
acacccccactatataaacactactaatgtgtgatccatccgatgtgggacttccacctttttcaattcacaccacactagttctacccattgtgggaat |
3992695 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
3992694 |
ttgtgtttagtcaattactcaatttccgcatatgttccaaca |
3992653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 7899973 - 7899837
Alignment:
| Q |
29 |
cccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtg |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||| |||||||||||||||||| ||| |||||||| |
|
|
| T |
7899973 |
cccactatataaacactactaatgtgtgatccat-tgatgtgggacttccacttttttcaattcacaccacactagttctacccattgtgggaatttgtg |
7899875 |
T |
 |
| Q |
129 |
tttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
7899874 |
tttagtcaattactcaatttccacatatgttccaacaa |
7899837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 34561476 - 34561618
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||| || || ||||||||| |||||||||||| |||| ||||||||||||| | ||| |
|
|
| T |
34561476 |
acacccccactatataaatactactaatgtgtgatccatccgacgtgggacttccacttttttcaattcacactatactaattctacccattataggaat |
34561575 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
34561576 |
ttgtgtttagtcaattactcaatttccacaaatgttccaacaa |
34561618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 41817854 - 41817980
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||| ||||| | ||||||| |||||||||||||| || ||||||||||| | | ||| |
|
|
| T |
41817854 |
acacccccactatataaacactactaatatgtgatccatccgatgtggaacttccacttttttcaattcacactacattaattctacccattgtaggaat |
41817953 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcc |
150 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
41817954 |
ttgtgtttaatcaattactcaatttcc |
41817980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 13521005 - 13520869
Alignment:
| Q |
32 |
actatataaacactactaatgtgtga--ttcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgt |
129 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||| | ||||||| |||||||||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
13521005 |
actatataaacactactaatgtgtgtatttcatccgatgtggaacttccacttttttcaattcacacaacactagttctacccaacatgggaatttgtgt |
13520906 |
T |
 |
| Q |
130 |
ttagtcaatt-actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||| || ||||||||||| | ||||||||||| |
|
|
| T |
13520905 |
ttagtcttttaactcaatttccacacatgttccaaca |
13520869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 31297552 - 31297409
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| | |||| ||||||| ||||||| |||||||||| |||||||||||||||| ||| | |
|
|
| T |
31297552 |
acacccccactatataaacattacaaatgtgtgtgttccatccgatgtagaacttccacttttt-caattcacacaacactagttctacccaacatgaga |
31297454 |
T |
 |
| Q |
122 |
atttgtgtttag--tcaattactcaatttcctcgtatgttccaac |
164 |
Q |
| |
|
|||||||||||| | ||||||||||||| || |||||||||| |
|
|
| T |
31297453 |
atttgtgtttagccttttttactcaatttccacgcatgttccaac |
31297409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 39320633 - 39320688
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttcca |
79 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||| |||||| ||||||| |
|
|
| T |
39320633 |
acacccccactatataaacattactaatgtgtgatctatccaatgtagaacttcca |
39320688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 89; Significance: 6e-43; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 6296937 - 6296796
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| || |||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
6296937 |
acacccccactatataaacactactaatgtgtgatccatccgatgtgggtcttccacttttttcaattcacactacactagttctacccattgtgggaat |
6296838 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
6296837 |
ttgtgtttagtcaattactcaatttccacatatgttccaaca |
6296796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 28856159 - 28856276
Alignment:
| Q |
28 |
ccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgt |
127 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||| || ||||| | |
|
|
| T |
28856159 |
ccccaccatataaacactactaatgtgtgatccatctgatgtgggacttccacttttttcaattcacactacattagttctacccattgtgtgaatttat |
28856258 |
T |
 |
| Q |
128 |
gtttagtcaattactcaa |
145 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
28856259 |
gtttagtcaattactcaa |
28856276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 10159744 - 10159600
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | |||| ||||| ||||||||| |||||||||| |||||||||||||| | |||| ||| |
|
|
| T |
10159744 |
acacccccactatataaacactactaatatgtgttccatccgatgtgggacttccacttttttcaattcacacaacactagttctacctaacatgggaat |
10159645 |
T |
 |
| Q |
124 |
ttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
10159644 |
ttgtgtttagtctttttaactcaatttccacagatgttccaacaa |
10159600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 17329278 - 17329341
Alignment:
| Q |
87 |
caattcacactacactagttctacccattatggaaatttgtgtttagtcaattactcaatttcc |
150 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17329278 |
caattcacattacaatagttctacccattatggaaatttatgtttagtcaattactcaatttcc |
17329341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 30659211 - 30659265
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttcca |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | |||| ||||| ||||||||| |
|
|
| T |
30659211 |
acacccccactatataaacactactaatgt-tgttccatccgatgtgggacttcca |
30659265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 19588711 - 19588682
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgt |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19588711 |
acacccccactatataaacactactaatgt |
19588682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 34746 - 34605
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
34746 |
acacccccactatataaacactattaatgtgtgatccatacgatgtgggacttccacttttttcaattcacactacactagttctacccattgtgggaat |
34647 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
34646 |
ttgtgtttagtcaattactcaatttccacatatgttccaaca |
34605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 59477 - 59618
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
59477 |
acacccccactatataaacattactaatgtgtgatccatccgatgtgggatttccacttttt-caattcacactacactagttctacccattgtgggaat |
59575 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
59576 |
ttgtgtttagtcaattactcaatttccacatatgttccaacaa |
59618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 63679 - 63820
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
63679 |
acacccccactatataaacattactaatgtgtgatccatccgatgtgggatttccacttttt-caattcacactacactagttctacccattgtgggaat |
63777 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
63778 |
ttgtgtttagtcaattactcaatttccacatatgttccaacaa |
63820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 10585206 - 10585066
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
10585206 |
acacccccactatataaacactactaatgtgtgatccatccgatgtgggacttccacttttt-caattcacactacactagttctacccattgtgggaat |
10585108 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||||| | | |||| ||||||| |
|
|
| T |
10585107 |
ttgtgtttagtcaattactcaattttcacatatgctccaaca |
10585066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 8070746 - 8070889
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| ||| |
|
|
| T |
8070746 |
acacccccactatataaacactactaatgtgtgttccatccgatgtgggacttcca-ttttttcaattcacacaacactagttctacccaacatgggaat |
8070844 |
T |
 |
| Q |
124 |
ttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
8070845 |
ttgtgtttagtctttttaactcaatttccacacatgttccaacaa |
8070889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 3034711 - 3034859
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtg-attc-atctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
3034711 |
acacccccactatataaacactactaatgtgtgtattccatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggga |
3034809 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaaaaa |
169 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
3034810 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaacaaaaa |
3034859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 45903306 - 45903238
Alignment:
| Q |
98 |
acactagttctacccattatggaaatttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
45903306 |
acactagttctacccattgtgggaatttgtgtttagtcaattactcaatttccacatatgttccaacaa |
45903238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 632069 - 632147
Alignment:
| Q |
88 |
aattcacactacactagttctacccattatggaaatttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
632069 |
aattcacactaaactagttttacccattgtgaaaatttgtgtttagtcaattactcaattttcacatatgttccaacaa |
632147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 8884237 - 8884350
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
8884237 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccatttttttcaattcacacaacactagttctacccaacatggga |
8884336 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8884337 |
atttgtgtttagtc |
8884350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 3673633 - 3673778
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
3673633 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggga |
3673731 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
3673732 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaacaa |
3673778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 8888983 - 8889096
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||| ||||||||| |||| | |
|
|
| T |
8888983 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttttcaattcacacaacactaattctacccaacatggga |
8889082 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8889083 |
atttgtgtttagtc |
8889096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 45903598 - 45903518
Alignment:
| Q |
27 |
cccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
45903598 |
cccccactatataaacactactaatgtgtgatctatccgatgtgagacttccaattttttcaattcacactacactagttc |
45903518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 3693687 - 3693832
Alignment:
| Q |
24 |
acacccccactatataaacactactaa--tgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| | |||| ||||| ||||||||| |||||||||| ||| |||||||||||| ||| | |
|
|
| T |
3693687 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttcca-ctttttcaattcacacaacattagttctacccaacatgaga |
3693785 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
3693786 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaacaa |
3693832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 632003 - 632033
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtg |
54 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
632003 |
acacccccactatataaacactactaatgtg |
632033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 8330403 - 8330261
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| ||||| |||||| || |||||||||||| ||||||||||||||| ||| ||| |
|
|
| T |
8330403 |
acacccctactatataaacactactaatgtgtgatccatccgatgtgggactttcacttttttcaattcacactatgctagttctacccattgtgggaat |
8330304 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
8330303 |
ttgtgtttagtcaattactcaatttccacatatgttccaacaa |
8330261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 37772785 - 37772928
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn---caattcacactacactagttctacccattatgga |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
37772785 |
acacccccactatataaacactactaatgtgtgatccatc-gatgtgggacttccattttttttttcaattcacactacactagttctacccattgtggg |
37772883 |
T |
 |
| Q |
121 |
aatttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
37772884 |
aatttgtgtttagtcaattactcaatttccacatatgttccaaca |
37772928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 25361742 - 25361624
Alignment:
| Q |
28 |
ccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgt |
127 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25361742 |
ccccactatataaatactactaatgtgtgatccatccgatgtgggacttccacttttt-caattcacactacactagttctacccattatgggaatttgt |
25361644 |
T |
 |
| Q |
128 |
gtttagtcaattactcaatt |
147 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
25361643 |
gtttagtccattactcaatt |
25361624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 34817763 - 34817620
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn--caattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||| |||| ||||||| ||||||| ||||| ||||||||||||||||| ||||| ||| | |
|
|
| T |
34817763 |
acactcccaatatataaacactactaatgtgtgatccatccgatgtagaacttccatttttttttcaatttacactacactagttctatccattgtggga |
34817664 |
T |
 |
| Q |
122 |
atttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||| ||||||||||||||| | | |||||||||||| |
|
|
| T |
34817663 |
atttgtgtttaatcaattactcaattttcacatatgttccaaca |
34817620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 21959473 - 21959595
Alignment:
| Q |
44 |
ctactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgtttagtcaattactc |
143 |
Q |
| |
|
||||||||||||||| ||| |||||| |||||||| |||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
21959473 |
ctactaatgtgtgatccatttgatgtgagacttccacttttttcaattcacactacattaattctacccattgtgggaatttgtgtttagtcaattactc |
21959572 |
T |
 |
| Q |
144 |
aatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||| | ||||||||||||| |
|
|
| T |
21959573 |
aatttcaacatatgttccaacaa |
21959595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 43301771 - 43301658
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgt--gtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
43301771 |
acacccccactatataaacactactaatgtatgtgttccatccgatgtaggacttccacttttttcaattcacacaacactagttctacccaagatggaa |
43301672 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
43301671 |
atttgtgtttagtc |
43301658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 31448892 - 31448747
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
31448892 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttttcaattcacacaacactagttctacccaacatggga |
31448793 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
31448792 |
atttgtgtttagtctttttaactcaatttccacacatgttccaaca |
31448747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 4242107 - 4241962
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
4242107 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggga |
4242009 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
4242008 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaacaa |
4241962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 4237368 - 4237224
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
4237368 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggga |
4237270 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
4237269 |
atttgtgtttagtctgtttaactcaatttccacacatgttccaaca |
4237224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 25361622 - 25361577
Alignment:
| Q |
121 |
aatttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||| |||||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
25361622 |
aatttttgtttagtcaattactcaatttccacatatgttacaacaa |
25361577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 6111755 - 6111615
Alignment:
| Q |
26 |
acccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnn-caattcacactacactagttctacccattatggaaatt |
124 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
6111755 |
accccgactatataaacactactaatgtgtaattcatccgatgtgggatttccattttttttcaattcacactacactagttctacccattgtgggaatt |
6111656 |
T |
 |
| Q |
125 |
tgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
6111655 |
tgtgtttagtcaattactcaatttccacgtatgttcaaaca |
6111615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 51937 - 51795
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| || || |||||||| ||||||||||||||||| ||||||||||| ||| ||| |
|
|
| T |
51937 |
acacccctactatataaacactactaatgtgtgatccatccgacgtgtgacttccacttttttcaattcacactacactaattctacccattgtgggaat |
51838 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
51837 |
ttgtgtttagtcaattactcaattttcacatatgttccaacaa |
51795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 46994 - 46857
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||| |||||||||||||||||||||| | |||| ||||| ||||||||| ||||||||||||||||||||||||||||| || |||| |
|
|
| T |
46994 |
acacccctactatataaacactactaatgt----tccatccgatgtgggacttccacttttttcaattcacactacactagttctacccattgtgaaaat |
46899 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
||||||||||||||||||||||| ||| | |||||||||||| |
|
|
| T |
46898 |
ttgtgtttagtcaattactcaatctccacatatgttccaaca |
46857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 48970 - 48841
Alignment:
| Q |
37 |
ataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgtttagtca |
136 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||| |
|
|
| T |
48970 |
ataaacactactaatgtgtgatccatccgatgtgggacttccacttttttcaattcacactacactagttcttcccattgtggaaatttgtatttagtca |
48871 |
T |
 |
| Q |
137 |
attactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
| |||||||||||| | ||||||||||||| |
|
|
| T |
48870 |
agtactcaatttccacatatgttccaacaa |
48841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 149664 - 149793
Alignment:
| Q |
37 |
ataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgtttagtca |
136 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||| |
|
|
| T |
149664 |
ataaacactactaatgtgtgatccatccgatgtgggacttccacttttttcaattcacactacactagttcttcccattgtggaaatttgtatttagtca |
149763 |
T |
 |
| Q |
137 |
attactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
| |||||||||||| | ||||||||||||| |
|
|
| T |
149764 |
agtactcaatttccacatatgttccaacaa |
149793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 41096974 - 41096835
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
41096974 |
acacccccactatataaacactaataatgtgtgatccatg-gatgtgggacttccattttttt-aattcacactacactagttctacccattgtggaaat |
41096877 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
41096876 |
ttgtgtttagtcaattactcaatttctacatatgttccaaca |
41096835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 33055850 - 33055993
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaat |
123 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||| |||||| |||||||||| ||| ||| |
|
|
| T |
33055850 |
acacctccactatataaacactactaatgtgtgatccatccgatgtgggacttccatttttttcaattcacactgcactaggtctacccattgtgggaat |
33055949 |
T |
 |
| Q |
124 |
ttgtgtttagtcaattactcaatttcctcgtatgttccaacaaa |
167 |
Q |
| |
|
||||| |||||||||||| |||||| | | |||||||||||||| |
|
|
| T |
33055950 |
ttgtgcttagtcaattacacaattttcacatatgttccaacaaa |
33055993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 3095156 - 3095304
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtga--ttcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
3095156 |
acacccccactatataaacactactaatgtgtgtgtttcatccgatgtgggacttccacttttt-caattcacacaacactagttctacccaacatggaa |
3095254 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaacaaaaa |
169 |
Q |
| |
|
||||||||||||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
3095255 |
atttgtgtttagtttgtttaactcaatttccacacatgttccaacaaaaa |
3095304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 40232414 - 40232321
Alignment:
| Q |
24 |
acacccccactatataaacactact-aatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccatta |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
40232414 |
acacccccactatataaacactactaaatgtgtgatccatccgatgtgggacttccacttttttcaattcacactacattagttctacccatta |
40232321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0484
Description:
Target: scaffold0484; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 7988 - 8106
Alignment:
| Q |
28 |
ccccactatataaacactactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgt |
127 |
Q |
| |
|
|||||||||||||| || ||||||||||||| |||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
7988 |
ccccactatataaataccactaatgtgtgatccatccgatgtgggacttccacttttt-caattctcactacactagttctacccattatgggaatttgt |
8086 |
T |
 |
| Q |
128 |
gtttagtcaattactcaatt |
147 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
8087 |
gtttagtcaattactcaatt |
8106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 8108 - 8153
Alignment:
| Q |
121 |
aatttgtgtttagtcaattactcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
||||| |||||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
8108 |
aatttttgtttagtcaattactcaatttccacatatgttacaacaa |
8153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 213375 - 213253
Alignment:
| Q |
44 |
ctactaatgtgtgattcatctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaaatttgtgtttagtcaattactc |
143 |
Q |
| |
|
||||||||||||||| ||| |||||| |||||||| |||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
213375 |
ctactaatgtgtgatccatttgatgtgagacttccacttttttcaattcacactacattaattctacccattgtgggaatttgtgtttagtcaattactc |
213276 |
T |
 |
| Q |
144 |
aatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||| | ||||||||||||| |
|
|
| T |
213275 |
aatttcaacatatgttccaacaa |
213253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 8909 - 8764
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||||| |||||||||| |||||||||||||||| |||| | |
|
|
| T |
8909 |
acacccccactatataaacactactaatgtgtgtgttccatccgatgtgggatttccacttttttcaattcacacaacactagttctacccaacatggga |
8810 |
T |
 |
| Q |
122 |
atttgtgtttagtcaatt--actcaatttcctcgtatgttccaaca |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||||| |
|
|
| T |
8809 |
atttgtgtttagtctttttaactcaatttccacacatgttccaaca |
8764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 83975 - 84088
Alignment:
| Q |
24 |
acacccccactatataaacactactaatgtgtgatt--catctgatgtaggacttccannnnnnncaattcacactacactagttctacccattatggaa |
121 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | ||| ||||||||||| || |||||||||| |||||||||||||||| || ||| |
|
|
| T |
83975 |
acacctccactatataaacactactaatgtgtgtgttccattcaatgtaggactttcactcttttcaattcacacaacactagttctacccaacatagaa |
84074 |
T |
 |
| Q |
122 |
atttgtgtttagtc |
135 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
84075 |
atttgtgtttagtc |
84088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0628 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0628
Description:
Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 5798 - 5878
Alignment:
| Q |
87 |
caattcacactacactagttctacccattatggaaatttgtgtttagtcaatt-actcaatttcctcgtatgttccaacaa |
166 |
Q |
| |
|
|||||||||| |||||||||||||| | |||| |||||||||||||| || ||||||||||| | |||||||||||| |
|
|
| T |
5798 |
caattcacacaacactagttctaccaaatatgagaatttgtgtttagtattttaactcaatttccacacatgttccaacaa |
5878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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