View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12261_low_5 (Length: 476)

Name: NF12261_low_5
Description: NF12261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12261_low_5
NF12261_low_5
[»] chr8 (24 HSPs)
chr8 (1-203)||(34530804-34531005)
chr8 (262-318)||(16206506-16206562)
chr8 (262-314)||(17442667-17442719)
chr8 (265-318)||(45539307-45539360)
chr8 (262-318)||(18121952-18122008)
chr8 (264-318)||(13431440-13431494)
chr8 (264-318)||(17796692-17796746)
chr8 (264-318)||(23185568-23185622)
chr8 (264-314)||(30422252-30422302)
chr8 (264-318)||(45292121-45292175)
chr8 (265-318)||(9319847-9319900)
chr8 (262-318)||(1744470-1744526)
chr8 (262-318)||(15336907-15336963)
chr8 (262-318)||(15425972-15426028)
chr8 (262-318)||(15517276-15517332)
chr8 (262-318)||(33561034-33561090)
chr8 (262-316)||(23264447-23264501)
chr8 (264-318)||(43639029-43639083)
chr8 (262-318)||(43773395-43773451)
chr8 (264-311)||(18321975-18322022)
chr8 (283-318)||(31445377-31445412)
chr8 (264-318)||(22673051-22673104)
chr8 (285-318)||(19942510-19942543)
chr8 (262-318)||(36104619-36104675)
[»] scaffold0290 (1 HSPs)
scaffold0290 (264-318)||(19429-19483)
[»] chr6 (23 HSPs)
chr6 (262-317)||(18377708-18377763)
chr6 (264-318)||(22801423-22801477)
chr6 (263-318)||(12041141-12041196)
chr6 (264-318)||(20113448-20113502)
chr6 (264-318)||(20731521-20731575)
chr6 (264-318)||(21234436-21234490)
chr6 (264-318)||(32543543-32543597)
chr6 (263-318)||(19688013-19688068)
chr6 (262-316)||(16876190-16876244)
chr6 (264-318)||(19066829-19066883)
chr6 (262-318)||(9717106-9717162)
chr6 (263-318)||(18434790-18434846)
chr6 (266-318)||(19952403-19952455)
chr6 (266-318)||(26588881-26588933)
chr6 (264-318)||(16333009-16333063)
chr6 (263-318)||(12422521-12422576)
chr6 (263-318)||(21624372-21624427)
chr6 (264-318)||(22077187-22077240)
chr6 (264-318)||(29917318-29917372)
chr6 (264-318)||(33353062-33353116)
chr6 (285-318)||(13435165-13435198)
chr6 (265-314)||(17380847-17380896)
chr6 (266-318)||(18912694-18912746)
[»] chr7 (31 HSPs)
chr7 (264-318)||(9710658-9710712)
chr7 (262-318)||(13138747-13138803)
chr7 (262-318)||(15087833-15087889)
chr7 (263-318)||(19328833-19328888)
chr7 (265-318)||(28623178-28623231)
chr7 (262-318)||(4832146-4832202)
chr7 (262-318)||(13879423-13879478)
chr7 (264-318)||(30946230-30946284)
chr7 (262-318)||(22580076-22580132)
chr7 (264-316)||(33692546-33692598)
chr7 (264-316)||(48237659-48237711)
chr7 (266-318)||(48806706-48806758)
chr7 (264-318)||(4820765-4820819)
chr7 (264-318)||(23280799-23280853)
chr7 (265-318)||(16546162-16546215)
chr7 (265-318)||(16619447-16619500)
chr7 (265-318)||(35954736-35954789)
chr7 (263-314)||(19237883-19237935)
chr7 (264-318)||(12175158-12175212)
chr7 (264-314)||(12367581-12367631)
chr7 (264-318)||(13473311-13473365)
chr7 (264-318)||(15467195-15467249)
chr7 (264-318)||(27870997-27871051)
chr7 (264-318)||(48063635-48063689)
chr7 (262-318)||(14424587-14424644)
chr7 (262-318)||(2266385-2266441)
chr7 (286-318)||(4493824-4493856)
chr7 (262-318)||(8182236-8182292)
chr7 (268-308)||(16911710-16911750)
chr7 (262-318)||(24795529-24795585)
chr7 (262-310)||(44466368-44466416)
[»] chr4 (26 HSPs)
chr4 (264-318)||(13576925-13576979)
chr4 (264-318)||(17246888-17246942)
chr4 (264-318)||(17399457-17399511)
chr4 (264-318)||(22676337-22676391)
chr4 (268-318)||(38513193-38513243)
chr4 (264-318)||(54679139-54679193)
chr4 (265-318)||(3792611-3792664)
chr4 (266-318)||(3500432-3500484)
chr4 (262-318)||(9752317-9752373)
chr4 (262-318)||(16852750-16852806)
chr4 (264-316)||(23749806-23749858)
chr4 (266-318)||(29120646-29120698)
chr4 (262-318)||(37436305-37436361)
chr4 (263-318)||(27189422-27189477)
chr4 (263-318)||(44397487-44397542)
chr4 (271-318)||(56033806-56033853)
chr4 (264-313)||(10072173-10072222)
chr4 (262-318)||(22089560-22089617)
chr4 (264-316)||(22190126-22190178)
chr4 (264-318)||(3106193-3106247)
chr4 (264-314)||(10071786-10071836)
chr4 (264-318)||(17701534-17701588)
chr4 (264-318)||(24628674-24628728)
chr4 (264-318)||(39420483-39420537)
chr4 (286-318)||(14905124-14905156)
chr4 (264-316)||(55731110-55731162)
[»] chr3 (40 HSPs)
chr3 (264-318)||(40799172-40799226)
chr3 (264-318)||(14968651-14968705)
chr3 (264-318)||(20628283-20628337)
chr3 (264-318)||(25399076-25399130)
chr3 (264-318)||(47206945-47206999)
chr3 (328-408)||(24714835-24714917)
chr3 (264-318)||(1241896-1241950)
chr3 (264-318)||(22463854-22463908)
chr3 (264-318)||(22465312-22465366)
chr3 (264-318)||(30054997-30055051)
chr3 (265-318)||(11222078-11222131)
chr3 (265-318)||(11222830-11222883)
chr3 (265-318)||(24776334-24776387)
chr3 (262-318)||(18122467-18122523)
chr3 (264-316)||(47406238-47406290)
chr3 (263-318)||(9700859-9700914)
chr3 (263-318)||(31302631-31302686)
chr3 (264-314)||(19885899-19885949)
chr3 (264-318)||(29952258-29952312)
chr3 (264-318)||(30001412-30001466)
chr3 (264-318)||(38178466-38178520)
chr3 (264-318)||(50299520-50299574)
chr3 (264-317)||(2782769-2782822)
chr3 (264-317)||(2783159-2783212)
chr3 (265-318)||(52283077-52283130)
chr3 (274-318)||(49554341-49554385)
chr3 (264-315)||(40850263-40850314)
chr3 (265-316)||(53057547-53057598)
chr3 (264-318)||(2025374-2025428)
chr3 (262-316)||(11189277-11189331)
chr3 (264-318)||(13823352-13823406)
chr3 (264-314)||(14393816-14393866)
chr3 (264-318)||(14954692-14954746)
chr3 (264-318)||(22804842-22804896)
chr3 (264-318)||(46350662-46350716)
chr3 (264-318)||(46797217-46797270)
chr3 (264-301)||(28581380-28581417)
chr3 (266-318)||(1728840-1728892)
chr3 (262-318)||(5212847-5212903)
chr3 (264-316)||(33582503-33582555)
[»] chr2 (18 HSPs)
chr2 (262-318)||(22188871-22188927)
chr2 (264-318)||(24851438-24851492)
chr2 (264-318)||(16494626-16494680)
chr2 (264-318)||(22801754-22801808)
chr2 (265-314)||(28701991-28702040)
chr2 (262-318)||(24724139-24724195)
chr2 (262-318)||(28551685-28551741)
chr2 (267-318)||(23234233-23234284)
chr2 (264-318)||(44839712-44839766)
chr2 (262-318)||(13964747-13964803)
chr2 (264-318)||(1587801-1587854)
chr2 (264-318)||(21537953-21538007)
chr2 (264-318)||(22786422-22786476)
chr2 (264-318)||(40331393-40331447)
chr2 (264-318)||(45087763-45087817)
chr2 (265-314)||(6391950-6391999)
chr2 (273-318)||(28712481-28712526)
chr2 (286-318)||(22455747-22455779)
[»] chr1 (24 HSPs)
chr1 (262-317)||(22600929-22600984)
chr1 (264-318)||(2833936-2833990)
chr1 (264-318)||(23037268-23037322)
chr1 (262-318)||(1577129-1577185)
chr1 (264-318)||(14264173-14264227)
chr1 (264-318)||(21983879-21983933)
chr1 (264-318)||(29215080-29215134)
chr1 (262-318)||(1899627-1899683)
chr1 (266-318)||(37640291-37640343)
chr1 (264-319)||(21121807-21121862)
chr1 (264-318)||(21205604-21205658)
chr1 (264-318)||(21215419-21215473)
chr1 (264-317)||(2266367-2266420)
chr1 (265-318)||(25449333-25449386)
chr1 (264-317)||(46088273-46088326)
chr1 (264-318)||(21135902-21135956)
chr1 (264-309)||(26702871-26702917)
chr1 (264-314)||(30892349-30892399)
chr1 (262-317)||(38281644-38281701)
chr1 (262-318)||(12625290-12625347)
chr1 (285-318)||(22153106-22153139)
chr1 (264-308)||(10756723-10756767)
chr1 (263-318)||(18614192-18614248)
chr1 (263-315)||(36133494-36133546)
[»] scaffold0359 (1 HSPs)
scaffold0359 (262-318)||(6497-6553)
[»] scaffold0859 (1 HSPs)
scaffold0859 (264-318)||(2251-2305)
[»] scaffold0205 (1 HSPs)
scaffold0205 (264-318)||(727-781)
[»] scaffold0045 (1 HSPs)
scaffold0045 (264-318)||(88373-88427)
[»] chr5 (20 HSPs)
chr5 (264-318)||(21075986-21076040)
chr5 (264-318)||(23880292-23880346)
chr5 (264-318)||(35932809-35932863)
chr5 (264-318)||(35987027-35987081)
chr5 (264-317)||(13736909-13736962)
chr5 (262-318)||(3246264-3246320)
chr5 (264-318)||(30742219-30742273)
chr5 (264-318)||(31146406-31146460)
chr5 (264-318)||(33021939-33021993)
chr5 (264-318)||(37395447-37395501)
chr5 (262-318)||(15516247-15516303)
chr5 (264-318)||(6498594-6498649)
chr5 (264-318)||(10848051-10848105)
chr5 (264-314)||(31487492-31487542)
chr5 (264-314)||(33932551-33932601)
chr5 (285-318)||(7746520-7746553)
chr5 (264-317)||(28138879-28138931)
chr5 (262-318)||(11993168-11993224)
chr5 (286-318)||(13546352-13546384)
chr5 (262-318)||(30116675-30116731)
[»] scaffold0028 (1 HSPs)
scaffold0028 (262-318)||(24549-24605)
[»] scaffold0056 (1 HSPs)
scaffold0056 (267-318)||(35521-35572)
[»] scaffold0043 (1 HSPs)
scaffold0043 (267-318)||(79137-79188)
[»] scaffold0280 (1 HSPs)
scaffold0280 (264-318)||(3458-3512)
[»] scaffold0334 (1 HSPs)
scaffold0334 (263-314)||(7181-7232)
[»] scaffold0622 (1 HSPs)
scaffold0622 (266-315)||(1946-1996)
[»] scaffold0488 (1 HSPs)
scaffold0488 (264-318)||(11481-11535)
[»] scaffold0352 (1 HSPs)
scaffold0352 (264-318)||(1592-1646)
[»] scaffold0217 (2 HSPs)
scaffold0217 (264-318)||(18318-18372)
scaffold0217 (264-318)||(22931-22985)
[»] scaffold0115 (1 HSPs)
scaffold0115 (264-314)||(17617-17667)
[»] scaffold0035 (1 HSPs)
scaffold0035 (264-314)||(20240-20290)
[»] scaffold0009 (1 HSPs)
scaffold0009 (264-318)||(83643-83697)
[»] scaffold0004 (1 HSPs)
scaffold0004 (264-318)||(210686-210739)
[»] scaffold0598 (1 HSPs)
scaffold0598 (262-318)||(2558-2615)
[»] scaffold0161 (2 HSPs)
scaffold0161 (285-318)||(10903-10936)
scaffold0161 (285-318)||(15567-15600)
[»] scaffold0023 (1 HSPs)
scaffold0023 (285-318)||(102837-102870)
[»] scaffold0471 (1 HSPs)
scaffold0471 (262-318)||(2735-2791)
[»] scaffold0439 (1 HSPs)
scaffold0439 (286-318)||(7506-7538)
[»] scaffold0249 (1 HSPs)
scaffold0249 (264-316)||(18534-18586)
[»] scaffold0247 (1 HSPs)
scaffold0247 (262-318)||(16487-16543)
[»] scaffold0069 (1 HSPs)
scaffold0069 (266-318)||(6044-6096)
[»] scaffold0011 (1 HSPs)
scaffold0011 (262-318)||(145221-145277)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 34531005 - 34530804
Alignment:
Q  1 ctatctagattataagaaaaaaggtcaggcaaaaccttcttttgcaaattgtaaaactttatcctttaaggaagactgaaaaaaaggtctaacaagttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34531005 ctatctagattataagaaaaaaggtcaggcaaaaccttcttttgcaaactgtaaaactttatcctttaaggaagactgaaaaaaaggtctaacaagttat 34530906  T
Q  101 aaataaggaaatgnnnnnnnnnntctttctctagaaaatagcaatctgttattcctagcactaattagtaattattccacaacaagtgtatgtgcttatt 200  Q
    |||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34530905 aaataaggaaatg-aaaaaaaaatctttctctagaaaatagcaatctgttattcctagcactaattagtaattattccacaacaagtgtatgtgcttatt 34530807  T
Q  201 ttt 203  Q
    |||    
T  34530806 ttt 34530804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 16206562 - 16206506
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  16206562 gtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 16206506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 17442667 - 17442719
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  17442667 gtttttatccgctgcatctagttctgaacatcacttcagaagtagaactctat 17442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 45539307 - 45539360
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  45539307 tttatccgctgcatcttgttctgaacatcacttcagaagtagaactctatctgc 45539360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 18121952 - 18122008
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||    
T  18121952 gtttttatccgctgcatctagtcctgatcatcacttcagaagtagaactctatctgc 18122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 13431440 - 13431494
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  13431440 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 13431494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 17796746 - 17796692
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||    
T  17796746 ttttatccgctgcaactagttctgaacatcacttcagaagtataactctatctgc 17796692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 23185568 - 23185622
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||    
T  23185568 ttttatccgctacatctagttctgaacatcgcttcagaagtagaactctatctgc 23185622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 30422252 - 30422302
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  30422252 ttttatccgctgcatctagttcagaacatcacttcagaagtagaactctat 30422302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 45292175 - 45292121
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||| |||||||    
T  45292175 ttttatccgctgcatctagttctgaacatctcttcagaagtagaactatatctgc 45292121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 9319900 - 9319847
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  9319900 tttatccgctgcaagtagttctgaacatcacttcagaagtagaactctatctgc 9319847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 1744526 - 1744470
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| |||||||||| | |||||||||||| |||||||||    
T  1744526 gtttttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctgc 1744470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 15336907 - 15336963
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||||||    
T  15336907 gtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgc 15336963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 15425972 - 15426028
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||||||    
T  15425972 gtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgc 15426028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 15517276 - 15517332
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||||||    
T  15517276 gtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgc 15517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 33561034 - 33561090
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  33561034 gtttttatccgctgcatctagttctgaacatttattcagaagtagaactctatctgc 33561090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 23264447 - 23264501
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||| |||||||||||||||  ||||||||||| |||||||||||| |||||||    
T  23264447 gttttaatccgctgcatctagtcctgaacatcacttcagaagtagaattctatct 23264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 43639083 - 43639029
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| ||||||| || | ||||||||||||||||||||||    
T  43639083 ttttatccgctgcatttagttctgaacttctcttcagaagtagaactctatctgc 43639029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 43773451 - 43773395
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||| |||||||||    |||||||||||||| |||||||    
T  43773451 gtttttatccgctgcatctagttctgaacatttattcagaagtagaactttatctgc 43773395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 18321975 - 18322022
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactc 311  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||||    
T  18321975 ttttatccgctgcatttagtcctgaacatcacctcagaagtagaactc 18322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 318
Target Start/End: Complemental strand, 31445412 - 31445377
Alignment:
Q  283 ctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31445412 ctctgaacatcacttcagaagtagaactctatctgc 31445377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 22673104 - 22673051
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  22673104 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctgc 22673051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 19942543 - 19942510
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  19942543 ctgaacatcacttcagaagtagaactctatctgc 19942510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 36104675 - 36104619
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||| ||||| | ||||||||||||||| ||||||    
T  36104675 gtttttatccgctgcaattagttctggacatctcttcagaagtagaactcaatctgc 36104619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 19429 - 19483
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19429 ttttatccgctgcatctagttctgaacatcacgtcagaagtagaactctatctgc 19483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 18377763 - 18377708
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  18377763 gtttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctg 18377708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 22801477 - 22801423
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  22801477 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgc 22801423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 12041196 - 12041141
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  12041196 tttttatccgctgcatctagttctgaacatcactttagaagtagaactctatctgc 12041141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 20113448 - 20113502
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  20113448 ttttatccgctgcatttagttctgaacatcacttcagaagtagaactctatctgc 20113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 20731521 - 20731575
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  20731521 ttttatccgctgcatctagttttgaacatcacttcagaagtagaactctatctgc 20731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 21234490 - 21234436
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  21234490 ttttatccgctgcatctagttctgaacatcacttcagaagtagaattctatctgc 21234436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 32543597 - 32543543
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  32543597 ttttatccgctgcatctagttctgaacatcacttcagaagtggaactctatctgc 32543543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 19688068 - 19688013
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||| |||||||    
T  19688068 tttttatccgctgcatctagttttgaacatcacttcagaagtagaactttatctgc 19688013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 16876244 - 16876190
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||    
T  16876244 gtttttatccgctgcatttagttctgaacatcacttcagaagcagaactctatct 16876190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 19066829 - 19066883
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  19066829 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 19066883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 9717162 - 9717106
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||| ||| |||||||| |||||||| |||||||||||||    
T  9717162 gtttttatccgatgcatctagttcttaacatcacttcagaagtggaactctatctgc 9717106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 18434846 - 18434790
Alignment:
Q  263 tttttatccgctgcat-ctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  18434846 tttttatccgctgcaagctagttctgaacatcacttcagaagtagaactctatctgc 18434790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 19952403 - 19952455
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||  |||||||| || ||||||||||||||||||||||    
T  19952403 ttatccgctgcatctagtcctgaacatgacatcagaagtagaactctatctgc 19952455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 26588933 - 26588881
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  26588933 ttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgc 26588881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 16333063 - 16333009
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||| |  ||| |||||||||||| ||||||||||||||||||||||    
T  16333063 ttttatccgctggaattagttctgaacatcacttcagaagtagaactctatctgc 16333009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 12422576 - 12422521
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||  ||| |||||||||| | |||||||||||||||| |||||    
T  12422576 tttttatccgctgcaattagttctgaacatctcttcagaagtagaactctttctgc 12422521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 21624427 - 21624372
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||| ||||||||||||||   ||||||||||| ||||||||| ||||||||||||    
T  21624427 ttttaatccgctgcatctattcctgaacatcacttcagaagtaaaactctatctgc 21624372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22077187 - 22077240
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  22077187 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctgc 22077240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 29917372 - 29917318
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| |||||||  ||||||||||  |||||||| |||||||||||||    
T  29917372 ttttatccgctacatctagtcctgaacatcagttcagaagtggaactctatctgc 29917318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 33353062 - 33353116
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||| ||| | ||||||||||||||||||||||    
T  33353062 ttttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgc 33353116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 13435198 - 13435165
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  13435198 ctgaacatcacttcagaagtagaactctatctgc 13435165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 17380896 - 17380847
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  17380896 tttatccgctgcaattagttctaaacatcacttcagaagtagaactctat 17380847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 18912746 - 18912694
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| ||| | |||||||| | |||||||||||| |||||||||    
T  18912746 ttatccgctgcatttagttatgaacatctcttcagaagtagaattctatctgc 18912694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 9710658 - 9710712
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  9710658 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgc 9710712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 13138747 - 13138803
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  13138747 gtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 13138803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 15087889 - 15087833
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  15087889 gtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 15087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 19328833 - 19328888
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  19328833 tttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 19328888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 28623178 - 28623231
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  28623178 tttatccgctacatctagttctgaacatcacttcagaagtagaactctatctgc 28623231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 4832146 - 4832202
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  4832146 gtttttatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgc 4832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 13879478 - 13879423
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13879478 gtttttatctgctgcatctag-tctgaacatcacttcagaagtagaactctatctgc 13879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 30946230 - 30946284
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  30946230 ttttatccgttgcatctagttctgaacatcacttcagacgtagaactctatctgc 30946284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 22580076 - 22580132
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||    
T  22580076 gtttttatcagctgcatctagttctgaacatcagttcagaagtagaactttatctgc 22580132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 33692546 - 33692598
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    |||||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  33692546 ttttattcgctgcatctagttctgaacatcacttcagaagtggaactctatct 33692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 48237659 - 48237711
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||| ||||||||| ||||||| |||| ||||||||||||||||||||    
T  48237659 ttttatccgatgcatctagttctgaacttcacttcagaagtagaactctatct 48237711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 48806706 - 48806758
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  48806706 ttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgc 48806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 4820819 - 4820765
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||||| ||| ||||||||||||||||||    
T  4820819 ttttatccgctgcaattagttctgaacatcacttcaaaagtagaactctatctgc 4820765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 23280799 - 23280853
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| | |||||| |||| ||||||||    
T  23280799 ttttatccgctgcatctagttctgaacatcactttagaagtggaacactatctgc 23280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 16546162 - 16546215
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||| |||||||    
T  16546162 tttatccgctgcaactagttctaaacatcacttcagaagtagaactttatctgc 16546215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 16619500 - 16619447
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||| |||||||    
T  16619500 tttatccgctgcaactagttctaaacatcacttcagaagtagaactttatctgc 16619447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 35954736 - 35954789
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| |||| |||||| ||||| ||||||||| ||||||||||||    
T  35954736 tttatccgctgcaactagttctgaatatcacttcagaagtaaaactctatctgc 35954789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 19237883 - 19237935
Alignment:
Q  263 tttttatccgctgcatctagc-tctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||||||||  |||||||||||| |||||||| |||||||||    
T  19237883 tttttatccgctgcatctagaatctgaacatcacttcagaagttgaactctat 19237935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 12175158 - 12175212
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| ||| |||||||| | |||||||    
T  12175158 ttttatccgctgcaactagttctgaacatcacttcaaaagtagaaatttatctgc 12175212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 12367581 - 12367631
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||| |||  ||||||||||| ||||||| ||||||||||    
T  12367581 ttttatccgctgcatttagtcctgaacatcacttcagaagaagaactctat 12367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 13473311 - 13473365
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| |||   |||||||||| |||||||||||||| |||||||    
T  13473311 ttttatccgctgcatttagtcttgaacatcacttcagaagtagaactatatctgc 13473365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 15467249 - 15467195
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||| |||||||||| | |||||||||| | |||||| |||||||||||||    
T  15467249 ttttatccactgcatctagttatgaacatcacttaagaagtggaactctatctgc 15467195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 27871051 - 27870997
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| | |||||||| | |||||||||||| |||||||||    
T  27871051 ttttatccgctgcatttaggtatgaacatctcttcagaagtagaattctatctgc 27870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 48063635 - 48063689
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| | |||| ||| | ||||||||||||||||||||||    
T  48063635 ttttatccgctgcatttagttatgaatatctcttcagaagtagaactctatctgc 48063689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 14424644 - 14424587
Alignment:
Q  262 gtttttatccgctgca-tctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| | ||| || ||||||||| ||||||||||||||| ||||||    
T  14424644 gtttttatccgctgcaatttagttccgaacatcacttcagaagtagaactcgatctgc 14424587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 2266385 - 2266441
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| | |||||||  | ||||||||||||||| ||||||    
T  2266385 gtttttatccgctgcatttagttatgaacatttcttcagaagtagaactcaatctgc 2266441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 4493856 - 4493824
Alignment:
Q  286 tgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||||||||||||||||||    
T  4493856 tgaacatcacttcagaagtagaactctatctgc 4493824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 8182292 - 8182236
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||||  ||| |||||||||| | |||||| |||||||||||||||    
T  8182292 gtttttatctgctgcaattagttctgaacatctcttcagaaatagaactctatctgc 8182236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 16911710 - 16911750
Alignment:
Q  268 atccgctgcatctagctctgaacatcacgtcagaagtagaa 308  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  16911710 atccgctgcaactagttctgaacatcacttcagaagtagaa 16911750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 24795529 - 24795585
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| ||| ||||||   |||||||||||| |||||||||    
T  24795529 gtttttatccgctgcatttagttctaaacatcttttcagaagtagaattctatctgc 24795585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 44466416 - 44466368
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaact 310  Q
    |||||||||||||||||||||   |||||||||| ||||| ||||||||    
T  44466416 gtttttatccgctgcatctagtcatgaacatcacttcagaggtagaact 44466368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 13576925 - 13576979
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13576925 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgc 13576979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 17246942 - 17246888
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  17246942 ttttatccgccgcatctagttctgaacatcacttcagaagtagaactctatctgc 17246888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 17399457 - 17399511
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  17399457 ttttatccgctgcatctagttctgaacatctcttcagaagtagaactctatctgc 17399511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22676337 - 22676391
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  22676337 ttttatccgctgcatctagtcctgaacatcacttcaaaagtagaactctatctgc 22676391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 38513243 - 38513193
Alignment:
Q  268 atccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  38513243 atccgctgcatctagctctgaacatctattcagaagtagaactctatctgc 38513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 54679193 - 54679139
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  54679193 ttttatccgctgcatcttgttttgaacatcacttcagaagtagaactctatctgc 54679139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 3792664 - 3792611
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| | |||| |||||||||||| ||||||||||||||||||||||    
T  3792664 tttatccgctgtaactagttctgaacatcacttcagaagtagaactctatctgc 3792611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 3500432 - 3500484
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  3500432 ttatccgctgcatttagttctgaacatcccttcagaagtagaactctatctgc 3500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 9752317 - 9752373
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  9752317 gtttttatccgctgcatctagttctgaacatttattcagaagtagaactctatctgc 9752373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 16852806 - 16852750
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| ||||||||| || |||||||||||||| |||||||    
T  16852806 gtttttatccgctgcatttagttctgaacattacttcagaagtagaactttatctgc 16852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 23749858 - 23749806
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||||||||||||    
T  23749858 ttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctatct 23749806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 29120698 - 29120646
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  29120698 ttatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgc 29120646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 37436305 - 37436361
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  37436305 gtttttattcgctgcttctagttctgaacatcacttcataagtagaactctatctgc 37436361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 27189422 - 27189477
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| ||| |||||||||| | |||||||||||| |||||||||    
T  27189422 tttttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctgc 27189477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 44397542 - 44397487
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||| |||||||  ||||||||||| ||||||| ||||||||||||||    
T  44397542 tttttatccgctacatctagtcctgaacatcacttcagaagcagaactctatctgc 44397487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 56033853 - 56033806
Alignment:
Q  271 cgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  56033853 cgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 56033806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 10072222 - 10072173
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactcta 313  Q
    ||||||||||||||||||| |||||||||||| ||||||||  |||||||    
T  10072222 ttttatccgctgcatctagttctgaacatcacttcagaagtgaaactcta 10072173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 22089617 - 22089560
Alignment:
Q  262 gtttttatccgctgcatctagc-tctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| |||| |||||||||||| |||||||  |||||||||||||    
T  22089617 gtttttatccgctgcatttagcatctgaacatcacttcagaagctgaactctatctgc 22089560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 22190178 - 22190126
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||||||||| ||| | |||||||| | ||||||||||||||||||||    
T  22190178 ttttatccgctgcatttagttatgaacatctcttcagaagtagaactctatct 22190126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 3106193 - 3106247
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| | |||||||| | ||||||||||||||||||||||    
T  3106193 ttttatccgctgcaattagttatgaacatctcttcagaagtagaactctatctgc 3106247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 10071836 - 10071786
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||  |||||||||| |||||||||||| |||||||| |||||||||    
T  10071836 ttttatctactgcatctagttctgaacatcacttcagaagtggaactctat 10071786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 17701534 - 17701588
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| | ||||||||   |||||||| |||||||||||||    
T  17701534 ttttatccgctgcatctagttatgaacatctattcagaagtggaactctatctgc 17701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 24628674 - 24628728
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||  ||||| |||  ||||||||||| ||||||||||||||||||||||    
T  24628674 ttttatccaatgcatttagtcctgaacatcacttcagaagtagaactctatctgc 24628728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 39420483 - 39420537
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| ||||||||||   |||||||| ||| |||||||||    
T  39420483 ttttatccgctgcatctagttctgaacatctattcagaagtggaattctatctgc 39420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 14905124 - 14905156
Alignment:
Q  286 tgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||||||||||||||||||    
T  14905124 tgaacatcacttcagaagtagaactctatctgc 14905156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 55731162 - 55731110
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    |||||||| ||||| |||| | |||||||||| |||||||||||| |||||||    
T  55731162 ttttatccactgcaactagttttgaacatcacttcagaagtagaaatctatct 55731110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 40799226 - 40799172
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  40799226 ttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgc 40799172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 14968705 - 14968651
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  14968705 ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 14968651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 20628283 - 20628337
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  20628283 ttttatccgttgcatctagttctgaacatcacttcagaagtagaactctatctgc 20628337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 25399076 - 25399130
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  25399076 ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 25399130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 47206999 - 47206945
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  47206999 ttttatccgctgcatctagttctaaacatcacttcagaagtagaactctatctgc 47206945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 24714917 - 24714835
Alignment:
Q  328 tttcttcttagttttctatttagtactatgtgtat--ttgttgttcatctaaattaagatttaggggctatagttgaaaaagg 408  Q
    |||||||||| |||||| ||||||| ||| |||||  ||||||||||||  ||||||| ||||||||||| ||||||||||||    
T  24714917 tttcttcttaattttctctttagtagtatatgtataattgttgttcatcctaattaagctttaggggctaaagttgaaaaagg 24714835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 1241896 - 1241950
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| |||||||||||| |||||||||    
T  1241896 ttttatccgctgcaactagttctgaacatcacttcagaagtagaaatctatctgc 1241950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22463854 - 22463908
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||| | |||||||||||| |||||||||    
T  22463854 ttttatccgctgcatctagttctgaacatctcttcagaagtagaattctatctgc 22463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22465312 - 22465366
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||| | |||||||||||| |||||||||    
T  22465312 ttttatccgctgcatctagttctgaacatctcttcagaagtagaattctatctgc 22465366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 30054997 - 30055051
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  30054997 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 30055051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 11222131 - 11222078
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  11222131 tttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgc 11222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 11222883 - 11222830
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  11222883 tttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgc 11222830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 24776334 - 24776387
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  24776334 tttatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgc 24776387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 18122467 - 18122523
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| | |||||||||  ||||||||||| ||||||||||||||||||||||    
T  18122467 gtttttatctgttgcatctagtcctgaacatcacttcagaagtagaactctatctgc 18122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 47406238 - 47406290
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| |||||||||    
T  47406238 ttttatccgctgcatctagttctgaacatcacttcacaagtagcactctatct 47406290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 9700859 - 9700914
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| ||| |||||||||| | |||||||||||| |||||||||    
T  9700859 tttttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctgc 9700914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 31302686 - 31302631
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| ||| ||||||| |||| | ||||||||||||||||||||    
T  31302686 tttttatccgctgcatatagttctgaacgtcactttagaagtagaactctatctgc 31302631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 19885899 - 19885949
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||||||||||    
T  19885899 ttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctat 19885949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 29952258 - 29952312
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||||    
T  29952258 ttttatccgttgcatttagtcctgaacatcacttcagaagtagaactctatctgc 29952312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 30001412 - 30001466
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||||    
T  30001412 ttttatccgttgcatttagtcctgaacatcacttcagaagtagaactctatctgc 30001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 38178466 - 38178520
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||    
T  38178466 ttttatccgctgcatatagtcctgaacatcacttcagaagaagaactctatctgc 38178520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 50299574 - 50299520
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||  |||||||||||| |||||||||    
T  50299574 ttttatccgctgcaactagttctgaacatcagttcagaagtagaaatctatctgc 50299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 2782822 - 2782769
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  2782822 ttttattcgctgcaactagttctgaacatcacttcagaagtagaattctatctg 2782769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 2783212 - 2783159
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  2783212 ttttattcgctgcaactagttctgaacatcacttcagaagtagaattctatctg 2783159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 52283130 - 52283077
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||  ||| | |||||||||| ||||||||||||||||||||||    
T  52283130 tttatccgctgcaggtagttatgaacatcacttcagaagtagaactctatctgc 52283077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 49554341 - 49554385
Alignment:
Q  274 tgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||    
T  49554341 tgcatctagtcctgaacatcacttcagaagtagaactctatctgc 49554385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 40850314 - 40850263
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatc 315  Q
    ||||||||||||||| ||  |||||||||| | |||||||||||||||||||    
T  40850314 ttttatccgctgcatttaattctgaacatctcttcagaagtagaactctatc 40850263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 53057547 - 53057598
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    |||||||||||||  ||| | |||||||||| ||||||||||||||||||||    
T  53057547 tttatccgctgcaattagttatgaacatcacttcagaagtagaactctatct 53057598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 2025428 - 2025374
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||| ||| | ||||||||||||||||||||||    
T  2025428 ttttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgc 2025374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 11189331 - 11189277
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    |||||||| |||||||| |||  ||||||||||| ||| ||||||||||||||||    
T  11189331 gtttttattcgctgcatatagtcctgaacatcacttcataagtagaactctatct 11189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 13823406 - 13823352
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||  ||||| ||||| |||||| ||||||| |||||||    
T  13823406 ttttatccgctgcatctagtcctgaagatcacttcagaattagaactttatctgc 13823352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 14393816 - 14393866
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||| ||||| |||  ||||||||||| ||||||||||||||||||    
T  14393816 ttttatccgatgcatttagtcctgaacatcacttcagaagtagaactctat 14393866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 14954746 - 14954692
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| |||| |||| ||| ||||| || ||||||||||||||||||||||    
T  14954746 ttttatccgttgcaactagttcttaacattacttcagaagtagaactctatctgc 14954692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22804842 - 22804896
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  |||  ||||||||||| ||| ||||||||||||||||||    
T  22804842 ttttatccgctgcaattagacctgaacatcacttcaaaagtagaactctatctgc 22804896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 46350662 - 46350716
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||| ||||||||||| |||| ||||||  ||| ||||||||||||||||||    
T  46350662 ttttatctgctgcatctagttctgcacatcatttcaaaagtagaactctatctgc 46350716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 46797217 - 46797270
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  46797217 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctgc 46797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 28581417 - 28581380
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcaga 301  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28581417 ttttatccgctgcatctagttctgaacatcacttcaga 28581380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 1728840 - 1728892
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||| ||| |||||| ||| | |||||||||||| |||||||||    
T  1728840 ttatccgctgcatttagttctgaaaatctcttcagaagtagaattctatctgc 1728892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 5212903 - 5212847
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||  ||| |||||| ||| | ||||||||||||||||||||||    
T  5212903 gtttttatccgttgcaattagttctgaatatctcttcagaagtagaactctatctgc 5212847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 33582555 - 33582503
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    |||||||||||||| |||| | |||||||||| |||||| ||||| |||||||    
T  33582555 ttttatccgctgcaactagttatgaacatcacttcagaattagaaatctatct 33582503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 22188871 - 22188927
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  22188871 gtttttatccgctgcatctagttctgaacatcacttcagaagtagaactatatctgc 22188927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 24851438 - 24851492
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  24851438 ttttatccgctgcatttagttctgaacatcacttcagaagtagaactctatctgc 24851492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 16494680 - 16494626
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  16494680 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 16494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 22801808 - 22801754
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  22801808 ttttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgc 22801754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 28701991 - 28702040
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  28701991 tttatccgctgcaactagttctgaacatcacttcagaagtagaactctat 28702040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 24724195 - 24724139
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| |||||||||||| |||||||  |||||||||||||    
T  24724195 gtttttatccgctgcatttagatctgaacatcacttcagaagctgaactctatctgc 24724139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 28551685 - 28551741
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  28551685 gtttttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgc 28551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 23234284 - 23234233
Alignment:
Q  267 tatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  23234284 tatctgctgcatctagttctgaacatcacttcagaagtaaaactctatctgc 23234233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 44839766 - 44839712
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||    
T  44839766 ttttatccgctgcatttagttctgaacatcttttcagaagtagaactctatctgc 44839712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 13964747 - 13964803
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| | ||||||||| |||||||| ||| |||||||||||||| |||||||    
T  13964747 gtttttatctgttgcatctagttctgaacaccacttcagaagtagaactttatctgc 13964803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 1587801 - 1587854
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  1587801 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctgc 1587854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21537953 - 21538007
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||| ||||||| |||   |||||||||| ||||||||||||||||||||||    
T  21537953 ttttatctgctgcatttagtcatgaacatcacttcagaagtagaactctatctgc 21538007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22786422 - 22786476
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| ||||||| || | ||||||||||||||||||||||    
T  22786422 ttttatccgctgcaattagttctgaacgtctcttcagaagtagaactctatctgc 22786476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 40331447 - 40331393
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| ||||| |||| | ||||||||||||||||||||||    
T  40331447 ttttatccgctgcagttagttctgatcatctcttcagaagtagaactctatctgc 40331393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 45087763 - 45087817
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||| |||| |||| |||||||||||| ||||||||| || |||||||||    
T  45087763 ttttatccgttgcaactagttctgaacatcacttcagaagtataaatctatctgc 45087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 6391999 - 6391950
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||||  ||| | |||||||||| ||||||||||||||||||    
T  6391999 tttatccgctgcaagtagttatgaacatcacttcagaagtagaactctat 6391950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 28712481 - 28712526
Alignment:
Q  273 ctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||| |||| |||||||||||| ||||||||| ||||||||||||    
T  28712481 ctgcaactagttctgaacatcacttcagaagtataactctatctgc 28712526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 22455747 - 22455779
Alignment:
Q  286 tgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||||||||||||||||||    
T  22455747 tgaacatcacttcagaagtagaactctatctgc 22455779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 22600929 - 22600984
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  22600929 gtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctg 22600984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 2833990 - 2833936
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  2833990 ttttatccgctgcatctagttctgaacatcacttcagaagtagagctctatctgc 2833936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 23037268 - 23037322
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  23037268 ttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgc 23037322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 1577185 - 1577129
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  1577185 gtttttatccgctgcatctagtcctaaacatcacttcagaagtagaactctatctgc 1577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 14264173 - 14264227
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| |||||||||||| |||||||||    
T  14264173 ttttatccgctgcaactagttctgaacatcacttcagaagtagaattctatctgc 14264227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 21983933 - 21983879
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  21983933 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 21983879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 29215134 - 29215080
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||    
T  29215134 ttttatccgctgcatctagttctgaatatcacttcagaagtggaactctatctgc 29215080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 1899683 - 1899627
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||   |||||||||| | ||||||||||||||||||||    
T  1899683 gtttttatccgctgcatctagtcatgaacatcactttagaagtagaactctatctgc 1899627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 37640343 - 37640291
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  37640343 ttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgc 37640291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 21121807 - 21121862
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgca 319  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||| |||||||    
T  21121807 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactccatctgca 21121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21205604 - 21205658
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||| ||||||||||||||||||    
T  21205604 ttttatccgctgcatttagttctgaacatctcttcaaaagtagaactctatctgc 21205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21215419 - 21215473
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||| ||||||||||||||||||    
T  21215419 ttttatccgctgcatttagttctgaacatctcttcaaaagtagaactctatctgc 21215473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 2266420 - 2266367
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    ||||||||||||||||||| | |  ||||||| |||||||||||||||||||||    
T  2266420 ttttatccgctgcatctagttatatacatcacttcagaagtagaactctatctg 2266367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 25449333 - 25449386
Alignment:
Q  265 tttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||  ||| |||||||||||| ||||||||| ||||||||||||    
T  25449333 tttatccgctgcaattagttctgaacatcacttcagaagtataactctatctgc 25449386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 46088326 - 46088273
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    ||||||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  46088326 ttttatccgctgcatttagttctgaacatcttttcagaagtagaactctatctg 46088273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21135902 - 21135956
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||| || ||| |||||||||| | ||||||||||||||| ||||||    
T  21135902 ttttatccgctgtatttagttctgaacatctcttcagaagtagaactcgatctgc 21135956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 26702871 - 26702917
Alignment:
Q  264 ttttatccgctgca-tctagctctgaacatcacgtcagaagtagaac 309  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  26702871 ttttatccgctgcaatctagttctgaacatcacttcagaagtagaac 26702917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 30892399 - 30892349
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||| ||||| ||| |||||||||||| | ||||||||||||||||    
T  30892399 ttttatccgttgcatttagttctgaacatcactttagaagtagaactctat 30892349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 38281701 - 38281644
Alignment:
Q  262 gtttttatccgctgc--atctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    |||||||||||||||  ||||||  ||||||||||| |||||||||||||| ||||||    
T  38281701 gtttttatccgctgcgcatctagtcctgaacatcacttcagaagtagaactatatctg 38281644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 12625290 - 12625347
Alignment:
Q  262 gtttttatccgctgcatctagc-tctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| |||||| |||  |||||||||||| |||||||| |||||||||||||    
T  12625290 gtttttatcctctgcatttagtatctgaacatcacttcagaagttgaactctatctgc 12625347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 22153139 - 22153106
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  22153139 ctgaacatcacttcagaagtagaactctatctgc 22153106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 10756767 - 10756723
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaa 308  Q
    ||||||||||||||| ||| ||||||||||||  |||||||||||    
T  10756767 ttttatccgctgcatttagttctgaacatcactccagaagtagaa 10756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 18614248 - 18614192
Alignment:
Q  263 tttttatccgctgcatctagct-ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||| ||| | ||||||||||| |||||||  |||||||||||||    
T  18614248 tttttatccgctgcatttagattctgaacatcacatcagaagctgaactctatctgc 18614192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 36133546 - 36133494
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatc 315  Q
    ||||||||||||||||||||  | ||||||||| ||| ||||| |||||||||    
T  36133546 tttttatccgctgcatctagtcccgaacatcacttcataagtaaaactctatc 36133494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 6497 - 6553
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||||||||||   |||||||||| ||||||||||||||||||||||    
T  6497 gtttttatccgctgcatctagtcttgaacatcacttcagaagtagaactctatctgc 6553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 2305 - 2251
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||    
T  2305 ttttatccgctacatctagttcagaacatcacttcagaagtagaactctatctgc 2251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 727 - 781
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  727 ttttatccgctgcatctagttctgaacatcacttcagaagtagaattccatctgc 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 88373 - 88427
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  88373 ttttatccgctgcaactagttctgaacatctcttcagaagtagaactctatctgc 88427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21075986 - 21076040
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||    
T  21075986 ttttatccgctgcatttagttctgaacatcacttcagaagtagaactcaatctgc 21076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 23880346 - 23880292
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||||||||||||||    
T  23880346 ttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctatctgc 23880292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 35932809 - 35932863
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  35932809 ttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 35932863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 35987027 - 35987081
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  35987027 ttttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgc 35987081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 13736909 - 13736962
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    ||||||||||||||||||| | |||||||||| |||||||| ||||||||||||    
T  13736909 ttttatccgctgcatctagttatgaacatcacttcagaagtggaactctatctg 13736962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 3246264 - 3246320
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  3246264 gtttttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgc 3246320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 30742273 - 30742219
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||| |||||| |||| |||||||||||| |||||||||||||| |||||||    
T  30742273 ttttatctgctgcaactagttctgaacatcacttcagaagtagaactatatctgc 30742219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 31146406 - 31146460
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | | ||||||||||||||||||||    
T  31146406 ttttatccgctgcatttagttctgaacatctctttagaagtagaactctatctgc 31146460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 33021993 - 33021939
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||  ||||||||| |||||||||||| || |||||||||||||||||||    
T  33021993 ttttatccattgcatctagttctgaacatcacttcggaagtagaactctatctgc 33021939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 37395501 - 37395447
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| |||| |||||||||||| |||||| ||||| |||||||||    
T  37395501 ttttatccgctgcaactagttctgaacatcacttcagaaatagaattctatctgc 37395447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 15516303 - 15516247
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||| ||| | ||||||||||||||||||||||    
T  15516303 gtttttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgc 15516247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 6498649 - 6498594
Alignment:
Q  264 ttttatccgctgcatct-agctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||||| || ||  ||||||||||| ||||||||||||||||||||||    
T  6498649 ttttatccgctgcaacttagtcctgaacatcacttcagaagtagaactctatctgc 6498594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 10848105 - 10848051
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| | ||||||||   ||||||||||||||||||||||    
T  10848105 ttttatccgctgcatttagttatgaacatcttttcagaagtagaactctatctgc 10848051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 31487542 - 31487492
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||||||||||  ||||||||||| ||| || |||||||||||    
T  31487542 ttttatccgctgcatctagtcctgaacatcacttcaaaattagaactctat 31487492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 33932601 - 33932551
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||||| |||| |||||||||||  |||||||||||| |||||    
T  33932601 ttttatccgctgcaactagttctgaacatcatttcagaagtagaaatctat 33932551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 7746520 - 7746553
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  7746520 ctgaacatcacttcagaagtagaactctatctgc 7746553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 28138931 - 28138879
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctg 317  Q
    ||||||||||||||  ||| |||||||||| | |||||||||||||||||||||    
T  28138931 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctg 28138879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 11993224 - 11993168
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| || |  ||| |||||||||||| ||||||| ||||||||||||||    
T  11993224 gtttttatccgttgaaattagttctgaacatcacttcagaagcagaactctatctgc 11993168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 13546352 - 13546384
Alignment:
Q  286 tgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||||||||||||||||||    
T  13546352 tgaacatcacttcagaagtagaactctatctgc 13546384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 30116675 - 30116731
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| ||| |||||| | ||||||| ||||||||||||||    
T  30116675 gtttttatccgctgcaattagttctaaacatctcttcagaagcagaactctatctgc 30116731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 24549 - 24605
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||||| ||||||||||    
T  24549 gtttttatccgctgcaattagttctgaacatcacttcagaagtagagctctatctgc 24605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 35521 - 35572
Alignment:
Q  267 tatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  35521 tatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgc 35572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 79137 - 79188
Alignment:
Q  267 tatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  79137 tatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgc 79188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 3458 - 3512
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  3458 ttttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgc 3512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 7232 - 7181
Alignment:
Q  263 tttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||||||| ||| | |||||||||| ||| ||||||||||||||    
T  7232 tttttatccgctgcatttagttgtgaacatcacttcaaaagtagaactctat 7181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 1996 - 1946
Alignment:
Q  266 ttatccgctgcatctag-ctctgaacatcacgtcagaagtagaactctatc 315  Q
    ||||||||||||| ||| ||||||||||||| |||||||| ||||||||||    
T  1996 ttatccgctgcatttagactctgaacatcacttcagaagttgaactctatc 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 11535 - 11481
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||| | |||||||| ||||| |||||||    
T  11535 ttttatccgctgcatttagttctgaacatctcttcagaagtggaactttatctgc 11481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 1592 - 1646
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||| || ||| ||| |||||||||| | ||||||||||||||||||||||    
T  1592 ttttatccactacatttagttctgaacatctcttcagaagtagaactctatctgc 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 18372 - 18318
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||| ||| |||||||||||| |||||||| ||||  |||||||    
T  18372 ttttatccgctgcatttagttctgaacatcacttcagaagtggaacattatctgc 18318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22931 - 22985
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| | |||||||| | ||||||||||||||||||||||    
T  22931 ttttatccgctgcaattagttttgaacatctcttcagaagtagaactctatctgc 22985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 17667 - 17617
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    |||||||||||| | |||| |||||||||||| |||||||||||| |||||    
T  17667 ttttatccgctggaactagttctgaacatcacttcagaagtagaaatctat 17617  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 20240 - 20290
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctat 314  Q
    ||||||||||||||| ||| |||||| ||||| ||||||| ||||||||||    
T  20240 ttttatccgctgcatttagttctgaatatcacttcagaagcagaactctat 20290  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 83697 - 83643
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||| |||||||||| ||| ||||| || |||||||| |||||||||||||    
T  83697 ttttatccactgcatctagttctaaacataacttcagaagtggaactctatctgc 83643  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 210739 - 210686
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  210739 ttttatccgctgcaattag-tctgaacatctcttcagaagtagaactctatctgc 210686  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 2558 - 2615
Alignment:
Q  262 gtttttatccgctgcatctagct-ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||| ||| | ||||||||||| |||||||  |||||||||||||    
T  2558 gtttttatccgctgcatttagattctgaacatcacttcagaagctgaactctatctgc 2615  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 10903 - 10936
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  10903 ctgaacatcacttcagaagtagaactctatctgc 10936  T

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Target: scaffold0161; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 15567 - 15600
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  15567 ctgaacatcacttcagaagtagaactctatctgc 15600  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 102870 - 102837
Alignment:
Q  285 ctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  102870 ctgaacatcacttcagaagtagaactctatctgc 102837  T

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Target: scaffold0471 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 2791 - 2735
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||| ||||| | ||||||||||||||| ||||||    
T  2791 gtttttatccgctgcaattagttctggacatctcttcagaagtagaactcaatctgc 2735  T

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Target: scaffold0439 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Original strand, 7506 - 7538
Alignment:
Q  286 tgaacatcacgtcagaagtagaactctatctgc 318  Q
    |||||||||| ||||||||||||||||||||||    
T  7506 tgaacatcacttcagaagtagaactctatctgc 7538  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 18534 - 18586
Alignment:
Q  264 ttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatct 316  Q
    ||||||||||||||  | | |||||||||| | ||||||||||||||||||||    
T  18534 ttttatccgctgcaatttgttctgaacatctcttcagaagtagaactctatct 18586  T

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Target: scaffold0247 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 16487 - 16543
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||||||||  ||| |||||||||| | |||||||||||| | |||||||    
T  16487 gtttttatccgctgcaattagttctgaacatctcttcagaagtagaattttatctgc 16543  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 6044 - 6096
Alignment:
Q  266 ttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||| ||||| ||| |||||||||| | |||||||||||| |||||||||    
T  6044 ttatccgttgcatttagttctgaacatctcttcagaagtagaattctatctgc 6096  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 145221 - 145277
Alignment:
Q  262 gtttttatccgctgcatctagctctgaacatcacgtcagaagtagaactctatctgc 318  Q
    ||||||||||| ||||  ||| ||||| |||| | ||||||||||||||||||||||    
T  145221 gtttttatccgttgcaattagttctgatcatctcttcagaagtagaactctatctgc 145277  T

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