View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12261_low_9 (Length: 441)
Name: NF12261_low_9
Description: NF12261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12261_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 9542899 - 9543160
Alignment:
| Q |
103 |
aggatggtatattgttactcaaagaagtaacatgatagaggtagctagtagctagtgtcctactttataaaagcaatttacttagtagttcaatgttagc |
202 |
Q |
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| T |
9542899 |
aggatggtatattgttactcaaagaagtaacatgatagaggtagctagtagctagtgtcctactttataaaagcaatttacttagtagttcaatgttagc |
9542998 |
T |
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| Q |
203 |
accaaatttcttacttgatggtttcttttctaatttggtttagttgttaaccagtcagatttatttcaagtgaaatctcagcattctagcttttacaagt |
302 |
Q |
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| T |
9542999 |
accaaatttcttacttgatggtttcttttctaatttggtttagttgttaaccagtcagatttatttcaagtgaaatctcagcattctagcttttacaagt |
9543098 |
T |
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| Q |
303 |
caaattcatgatagtgacattttggatttacaagtgaaattctaagattttgacattttagc |
364 |
Q |
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| T |
9543099 |
caaattcatgatagtgacatttaggatttacaagtgaaattctaggatttagacattttagc |
9543160 |
T |
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