View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12268_low_12 (Length: 285)

Name: NF12268_low_12
Description: NF12268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12268_low_12
NF12268_low_12
[»] chr3 (73 HSPs)
chr3 (18-277)||(28812389-28812648)
chr3 (106-218)||(34910279-34910391)
chr3 (136-262)||(4987232-4987358)
chr3 (109-267)||(14209079-14209236)
chr3 (128-267)||(41961586-41961726)
chr3 (136-267)||(14216884-14217015)
chr3 (136-267)||(14223013-14223144)
chr3 (136-267)||(34185059-34185190)
chr3 (128-267)||(14829673-14829813)
chr3 (136-250)||(14832091-14832205)
chr3 (145-267)||(17005555-17005677)
chr3 (136-261)||(15796236-15796361)
chr3 (107-267)||(20503429-20503577)
chr3 (136-267)||(8039771-8039902)
chr3 (136-203)||(10954944-10955011)
chr3 (136-267)||(49651723-49651853)
chr3 (136-262)||(28917993-28918110)
chr3 (139-267)||(55401070-55401187)
chr3 (136-267)||(27505238-27505363)
chr3 (136-256)||(9800032-9800152)
chr3 (128-203)||(16000016-16000092)
chr3 (136-200)||(26508102-26508166)
chr3 (144-219)||(1509539-1509614)
chr3 (136-203)||(8587021-8587088)
chr3 (136-203)||(21479110-21479177)
chr3 (136-221)||(750600-750685)
chr3 (136-220)||(4990950-4991034)
chr3 (136-203)||(10335286-10335353)
chr3 (144-203)||(51206353-51206412)
chr3 (136-202)||(10268487-10268553)
chr3 (135-205)||(21256984-21257054)
chr3 (136-261)||(25064901-25065024)
chr3 (106-202)||(22774071-22774167)
chr3 (136-197)||(35994744-35994804)
chr3 (136-196)||(11610513-11610573)
chr3 (136-203)||(25775500-25775568)
chr3 (105-179)||(40052294-40052367)
chr3 (136-254)||(2620004-2620120)
chr3 (209-268)||(3631738-3631797)
chr3 (136-203)||(8383249-8383316)
chr3 (136-206)||(14747553-14747624)
chr3 (151-206)||(25948884-25948939)
chr3 (136-203)||(26492205-26492272)
chr3 (136-267)||(29508436-29508562)
chr3 (203-262)||(40993287-40993346)
chr3 (138-184)||(14979175-14979221)
chr3 (136-206)||(39756228-39756298)
chr3 (142-203)||(7928448-7928509)
chr3 (138-206)||(3164022-3164090)
chr3 (151-267)||(11665951-11666067)
chr3 (151-203)||(38731225-38731277)
chr3 (141-277)||(55212960-55213095)
chr3 (152-267)||(16789020-16789134)
chr3 (136-203)||(18426941-18427008)
chr3 (144-210)||(15314869-15314935)
chr3 (135-221)||(16192732-16192818)
chr3 (144-203)||(8593136-8593196)
chr3 (136-184)||(12703999-12704047)
chr3 (151-219)||(28678310-28678378)
chr3 (192-255)||(13806284-13806347)
chr3 (226-261)||(25775578-25775613)
chr3 (136-243)||(26290363-26290470)
chr3 (136-203)||(35222930-35222997)
chr3 (105-140)||(37991464-37991499)
chr3 (203-261)||(7171549-7171607)
chr3 (106-203)||(33359722-33359820)
chr3 (128-197)||(34307786-34307856)
chr3 (153-221)||(15812805-15812871)
chr3 (230-267)||(24204988-24205025)
chr3 (226-267)||(25365533-25365574)
chr3 (203-267)||(11252024-11252088)
chr3 (136-184)||(11493380-11493428)
chr3 (156-212)||(39002044-39002100)
[»] chr7 (70 HSPs)
chr7 (136-260)||(24339634-24339758)
chr7 (124-267)||(9408270-9408414)
chr7 (136-267)||(7438698-7438829)
chr7 (151-262)||(26033402-26033513)
chr7 (136-267)||(5409778-5409903)
chr7 (106-206)||(18215183-18215283)
chr7 (136-267)||(43027411-43027536)
chr7 (136-266)||(6630849-6630979)
chr7 (136-228)||(21560490-21560587)
chr7 (165-262)||(27229252-27229349)
chr7 (136-261)||(32308112-32308237)
chr7 (139-220)||(11272569-11272652)
chr7 (136-203)||(8234138-8234205)
chr7 (136-203)||(25481894-25481961)
chr7 (142-204)||(3991322-3991384)
chr7 (136-262)||(25822647-25822773)
chr7 (136-206)||(27945033-27945103)
chr7 (144-267)||(9778500-9778617)
chr7 (136-236)||(11665407-11665507)
chr7 (145-261)||(32093967-32094079)
chr7 (114-252)||(11831402-11831540)
chr7 (151-267)||(21880159-21880264)
chr7 (165-262)||(2334271-2334367)
chr7 (139-267)||(13770686-13770808)
chr7 (128-259)||(15902805-15902937)
chr7 (137-204)||(35861957-35862024)
chr7 (106-203)||(7197297-7197394)
chr7 (136-202)||(11061077-11061143)
chr7 (152-212)||(18039006-18039067)
chr7 (147-206)||(7058429-7058488)
chr7 (137-216)||(19206043-19206122)
chr7 (136-203)||(24105670-24105737)
chr7 (136-199)||(40287361-40287423)
chr7 (106-203)||(15680771-15680868)
chr7 (137-203)||(28155563-28155629)
chr7 (136-202)||(33994204-33994270)
chr7 (158-219)||(1885587-1885648)
chr7 (144-213)||(13300410-13300479)
chr7 (107-219)||(25791616-25791727)
chr7 (203-267)||(598256-598320)
chr7 (144-204)||(19992001-19992061)
chr7 (152-267)||(38134342-38134457)
chr7 (128-221)||(26329364-26329458)
chr7 (136-190)||(29763187-29763241)
chr7 (137-206)||(10042930-10042999)
chr7 (136-267)||(1433446-1433571)
chr7 (128-194)||(13557750-13557820)
chr7 (151-203)||(19213810-19213862)
chr7 (136-184)||(22868034-22868082)
chr7 (136-267)||(43249985-43250116)
chr7 (139-202)||(5835242-5835305)
chr7 (152-251)||(6028633-6028732)
chr7 (136-203)||(20549783-20549850)
chr7 (136-203)||(26733296-26733363)
chr7 (216-267)||(29763136-29763187)
chr7 (137-184)||(29787388-29787435)
chr7 (152-206)||(11890916-11890970)
chr7 (144-206)||(18013071-18013133)
chr7 (137-203)||(21826266-21826332)
chr7 (136-206)||(22602707-22602777)
chr7 (210-267)||(21864863-21864920)
chr7 (136-213)||(23128651-23128728)
chr7 (208-261)||(33994265-33994318)
chr7 (136-201)||(41020488-41020553)
chr7 (209-261)||(5307310-5307362)
chr7 (214-262)||(14077386-14077434)
chr7 (214-262)||(14387414-14387462)
chr7 (231-267)||(35862027-35862063)
chr7 (223-267)||(40287309-40287353)
chr7 (158-202)||(48438560-48438604)
[»] chr2 (62 HSPs)
chr2 (106-267)||(37419704-37419866)
chr2 (128-267)||(36756280-36756420)
chr2 (137-262)||(15657857-15657982)
chr2 (142-267)||(30717466-30717591)
chr2 (136-267)||(11223800-11223930)
chr2 (136-267)||(26769503-26769634)
chr2 (139-267)||(2438666-2438783)
chr2 (106-203)||(37558939-37559036)
chr2 (136-267)||(18840960-18841080)
chr2 (151-259)||(4882640-4882748)
chr2 (136-203)||(19536397-19536465)
chr2 (143-209)||(974746-974812)
chr2 (136-206)||(12668420-12668490)
chr2 (151-267)||(44860327-44860443)
chr2 (136-203)||(15972865-15972932)
chr2 (136-203)||(18421955-18422022)
chr2 (136-267)||(34784918-34785049)
chr2 (136-205)||(20539672-20539741)
chr2 (136-212)||(23058433-23058510)
chr2 (138-203)||(30335411-30335476)
chr2 (106-203)||(30404850-30404952)
chr2 (136-267)||(18420370-18420501)
chr2 (137-196)||(21374706-21374765)
chr2 (136-203)||(38117159-38117226)
chr2 (136-206)||(33153416-33153486)
chr2 (128-203)||(20473305-20473381)
chr2 (172-267)||(35056896-35056991)
chr2 (136-267)||(21782751-21782885)
chr2 (136-206)||(24894381-24894451)
chr2 (150-203)||(5367198-5367251)
chr2 (144-197)||(12940941-12940994)
chr2 (128-203)||(21624249-21624326)
chr2 (136-199)||(6940247-6940310)
chr2 (136-202)||(14996224-14996291)
chr2 (136-203)||(20242727-20242794)
chr2 (144-261)||(4207857-4207973)
chr2 (141-203)||(5040729-5040793)
chr2 (151-263)||(18889530-18889643)
chr2 (139-184)||(28677904-28677949)
chr2 (209-267)||(35449561-35449621)
chr2 (203-267)||(12224271-12224335)
chr2 (136-184)||(21616754-21616802)
chr2 (141-220)||(36409612-36409689)
chr2 (151-221)||(6045898-6045968)
chr2 (231-261)||(10535698-10535728)
chr2 (136-263)||(27084254-27084377)
chr2 (165-219)||(28524447-28524501)
chr2 (136-202)||(42832277-42832343)
chr2 (154-242)||(15528362-15528451)
chr2 (106-267)||(27286228-27286394)
chr2 (128-191)||(29367381-29367446)
chr2 (146-203)||(38442309-38442366)
chr2 (151-196)||(39323271-39323316)
chr2 (166-203)||(44635520-44635557)
chr2 (106-162)||(18422526-18422582)
chr2 (150-206)||(18622612-18622668)
chr2 (136-200)||(23718018-23718082)
chr2 (136-200)||(24105690-24105754)
chr2 (203-267)||(28596517-28596581)
chr2 (137-201)||(29176495-29176559)
chr2 (151-203)||(34691805-34691857)
chr2 (151-203)||(34714217-34714269)
[»] chr1 (92 HSPs)
chr1 (128-267)||(47989481-47989620)
chr1 (121-267)||(9828021-9828167)
chr1 (136-262)||(6612112-6612238)
chr1 (136-267)||(1486651-1486776)
chr1 (144-267)||(6332671-6332793)
chr1 (136-267)||(40917743-40917872)
chr1 (128-261)||(5944264-5944400)
chr1 (151-267)||(31694646-31694764)
chr1 (136-206)||(24577183-24577253)
chr1 (142-262)||(40258885-40258994)
chr1 (111-267)||(18556392-18556548)
chr1 (136-259)||(38078616-38078728)
chr1 (136-267)||(6427453-6427587)
chr1 (136-203)||(22881616-22881683)
chr1 (136-267)||(32461400-32461530)
chr1 (136-206)||(113291-113361)
chr1 (106-203)||(37598793-37598890)
chr1 (107-203)||(46348383-46348479)
chr1 (135-206)||(1704989-1705060)
chr1 (136-267)||(22515834-22515954)
chr1 (136-220)||(10572572-10572656)
chr1 (136-203)||(42359449-42359516)
chr1 (136-260)||(1815249-1815362)
chr1 (106-196)||(14359529-14359623)
chr1 (152-266)||(16164252-16164366)
chr1 (139-267)||(25361881-25362005)
chr1 (151-244)||(9629859-9629952)
chr1 (98-203)||(51409973-51410084)
chr1 (136-203)||(19058856-19058923)
chr1 (106-202)||(28273089-28273190)
chr1 (136-203)||(31672895-31672962)
chr1 (144-261)||(17778549-17778659)
chr1 (153-203)||(18337338-18337388)
chr1 (136-201)||(21378570-21378635)
chr1 (165-254)||(30173711-30173800)
chr1 (106-201)||(32434718-32434815)
chr1 (137-220)||(5376483-5376566)
chr1 (154-221)||(44482240-44482307)
chr1 (144-202)||(18190109-18190167)
chr1 (140-198)||(31015039-31015097)
chr1 (136-202)||(36878453-36878519)
chr1 (136-198)||(48450592-48450654)
chr1 (206-259)||(33202954-33203007)
chr1 (136-184)||(398784-398832)
chr1 (136-184)||(12443479-12443527)
chr1 (165-213)||(34371734-34371782)
chr1 (106-203)||(35702588-35702691)
chr1 (139-203)||(41877470-41877534)
chr1 (136-203)||(9103632-9103698)
chr1 (115-202)||(43492495-43492582)
chr1 (136-202)||(2896122-2896188)
chr1 (136-206)||(7918208-7918278)
chr1 (137-203)||(13436451-13436517)
chr1 (193-267)||(17408740-17408814)
chr1 (137-206)||(35919273-35919347)
chr1 (155-220)||(15449215-15449279)
chr1 (230-267)||(16297228-16297265)
chr1 (186-267)||(21032248-21032329)
chr1 (106-202)||(5898267-5898368)
chr1 (136-195)||(13011223-13011283)
chr1 (131-203)||(14332642-14332714)
chr1 (140-203)||(21620946-21621014)
chr1 (142-182)||(23738676-23738716)
chr1 (136-184)||(34298428-34298476)
chr1 (136-179)||(1262876-1262919)
chr1 (142-201)||(1864882-1864941)
chr1 (208-267)||(5898213-5898272)
chr1 (143-199)||(18471297-18471355)
chr1 (136-206)||(6427342-6427412)
chr1 (155-221)||(12611977-12612043)
chr1 (156-206)||(25272494-25272544)
chr1 (209-267)||(26830641-26830699)
chr1 (151-245)||(27471524-27471618)
chr1 (128-197)||(30359371-30359441)
chr1 (169-206)||(2218264-2218301)
chr1 (136-197)||(3490396-3490457)
chr1 (151-220)||(8010270-8010339)
chr1 (136-201)||(13997875-13997940)
chr1 (152-209)||(15323171-15323228)
chr1 (136-262)||(17831474-17831598)
chr1 (135-184)||(21366039-21366088)
chr1 (131-267)||(25934603-25934739)
chr1 (139-196)||(29144365-29144422)
chr1 (230-267)||(42359396-42359433)
chr1 (151-203)||(5927340-5927392)
chr1 (231-267)||(7918161-7918197)
chr1 (136-184)||(17754303-17754351)
chr1 (203-259)||(19637816-19637872)
chr1 (231-267)||(22947806-22947842)
chr1 (171-203)||(24334705-24334737)
chr1 (151-203)||(40181878-40181930)
chr1 (151-211)||(40285646-40285706)
[»] chr8 (67 HSPs)
chr8 (136-267)||(15816065-15816196)
chr8 (136-267)||(22651968-22652099)
chr8 (136-267)||(29510240-29510371)
chr8 (135-267)||(29447046-29447178)
chr8 (106-267)||(36450701-36450851)
chr8 (135-267)||(8343307-8343439)
chr8 (128-267)||(4673361-4673501)
chr8 (144-213)||(25566841-25566910)
chr8 (135-243)||(2572016-2572124)
chr8 (136-262)||(41831887-41832007)
chr8 (136-213)||(13436954-13437031)
chr8 (105-201)||(40332154-40332248)
chr8 (139-267)||(11927022-11927150)
chr8 (137-261)||(11944658-11944782)
chr8 (136-262)||(31556989-31557103)
chr8 (149-203)||(4948657-4948711)
chr8 (105-204)||(8342929-8343032)
chr8 (118-267)||(21465388-21465535)
chr8 (106-203)||(22595950-22596053)
chr8 (152-267)||(11803267-11803382)
chr8 (136-203)||(20873061-20873128)
chr8 (137-267)||(22197678-22197808)
chr8 (136-203)||(24613513-24613579)
chr8 (136-206)||(30271288-30271358)
chr8 (137-202)||(4298887-4298952)
chr8 (128-203)||(24669416-24669492)
chr8 (167-267)||(29447467-29447567)
chr8 (136-267)||(44067508-44067639)
chr8 (136-203)||(5813584-5813651)
chr8 (136-203)||(18170482-18170549)
chr8 (136-203)||(18634050-18634117)
chr8 (136-203)||(30077387-30077454)
chr8 (203-258)||(44462151-44462206)
chr8 (203-258)||(44469684-44469739)
chr8 (106-202)||(14134661-14134757)
chr8 (136-267)||(18407711-18407831)
chr8 (109-203)||(13844596-13844689)
chr8 (136-200)||(25192350-25192414)
chr8 (152-259)||(28384937-28385045)
chr8 (151-267)||(28745505-28745621)
chr8 (136-203)||(4786338-4786405)
chr8 (143-206)||(17468505-17468568)
chr8 (135-213)||(24362192-24362270)
chr8 (165-267)||(26902111-26902213)
chr8 (144-267)||(16641916-16642033)
chr8 (135-172)||(24196628-24196665)
chr8 (141-221)||(27067282-27067360)
chr8 (151-251)||(12570461-12570560)
chr8 (136-200)||(31236580-31236644)
chr8 (151-202)||(20679396-20679447)
chr8 (215-262)||(22943301-22943348)
chr8 (136-206)||(24858001-24858073)
chr8 (136-203)||(34897077-34897144)
chr8 (136-195)||(41838131-41838190)
chr8 (139-201)||(7658458-7658520)
chr8 (229-267)||(13436917-13436955)
chr8 (136-182)||(27101507-27101553)
chr8 (144-201)||(31514872-31514930)
chr8 (135-205)||(39954277-39954347)
chr8 (143-204)||(7472514-7472575)
chr8 (226-267)||(8343038-8343079)
chr8 (238-267)||(25566913-25566942)
chr8 (151-203)||(3025558-3025610)
chr8 (203-259)||(9945300-9945356)
chr8 (230-262)||(17751731-17751763)
chr8 (230-262)||(17760718-17760750)
chr8 (136-261)||(24727694-24727821)
[»] chr6 (81 HSPs)
chr6 (136-267)||(16766689-16766820)
chr6 (136-259)||(8365463-8365586)
chr6 (137-260)||(9107313-9107436)
chr6 (136-260)||(5970051-5970175)
chr6 (136-263)||(8713971-8714099)
chr6 (147-267)||(31384923-31385042)
chr6 (106-206)||(10770671-10770776)
chr6 (136-203)||(34595126-34595193)
chr6 (131-267)||(18367823-18367959)
chr6 (137-203)||(7801156-7801222)
chr6 (128-201)||(16833291-16833365)
chr6 (136-267)||(12696316-12696441)
chr6 (136-203)||(853859-853926)
chr6 (136-203)||(7977830-7977897)
chr6 (136-203)||(8776973-8777040)
chr6 (136-261)||(3398611-3398729)
chr6 (106-203)||(17841589-17841686)
chr6 (151-252)||(9522898-9522999)
chr6 (107-261)||(28152062-28152204)
chr6 (137-197)||(1681751-1681811)
chr6 (136-267)||(10339061-10339193)
chr6 (136-267)||(3209373-3209511)
chr6 (136-203)||(426514-426581)
chr6 (143-267)||(24645479-24645593)
chr6 (136-267)||(4877934-4878054)
chr6 (136-206)||(7930297-7930367)
chr6 (136-202)||(7938108-7938174)
chr6 (145-206)||(9911525-9911587)
chr6 (136-198)||(31959151-31959213)
chr6 (136-267)||(32978846-32978967)
chr6 (136-261)||(5000568-5000693)
chr6 (137-202)||(15489733-15489798)
chr6 (152-245)||(25038029-25038122)
chr6 (151-267)||(10294114-10294230)
chr6 (151-261)||(28715302-28715401)
chr6 (136-203)||(6898281-6898348)
chr6 (107-267)||(7248329-7248481)
chr6 (136-206)||(17302548-17302619)
chr6 (106-251)||(17435162-17435306)
chr6 (140-197)||(1191706-1191763)
chr6 (136-213)||(26562681-26562758)
chr6 (135-219)||(21395292-21395375)
chr6 (152-203)||(403864-403915)
chr6 (136-203)||(7265593-7265660)
chr6 (137-216)||(8931589-8931668)
chr6 (151-206)||(9025491-9025546)
chr6 (136-203)||(19040344-19040411)
chr6 (136-203)||(33001289-33001356)
chr6 (136-206)||(9027170-9027240)
chr6 (151-221)||(9195736-9195806)
chr6 (136-262)||(9629375-9629501)
chr6 (136-202)||(19044456-19044522)
chr6 (136-221)||(16488572-16488657)
chr6 (136-184)||(10842524-10842572)
chr6 (215-267)||(13364652-13364704)
chr6 (136-196)||(17341671-17341731)
chr6 (105-219)||(28862082-28862197)
chr6 (144-184)||(34225828-34225868)
chr6 (136-219)||(34290063-34290144)
chr6 (152-251)||(4118285-4118384)
chr6 (136-179)||(24115871-24115914)
chr6 (151-267)||(1532247-1532360)
chr6 (136-206)||(2117068-2117137)
chr6 (141-223)||(6349717-6349799)
chr6 (151-205)||(7151419-7151473)
chr6 (136-202)||(13360373-13360439)
chr6 (143-193)||(25010212-25010262)
chr6 (151-213)||(34073337-34073399)
chr6 (154-203)||(1700362-1700411)
chr6 (139-203)||(7027236-7027301)
chr6 (136-201)||(9658871-9658936)
chr6 (147-204)||(10827560-10827617)
chr6 (234-267)||(17341628-17341661)
chr6 (171-224)||(20576612-20576665)
chr6 (226-267)||(26178625-26178666)
chr6 (136-202)||(27904037-27904105)
chr6 (152-201)||(32299283-32299332)
chr6 (175-220)||(34384958-34385003)
chr6 (152-204)||(9617442-9617494)
chr6 (139-203)||(21924935-21924999)
chr6 (151-203)||(32511666-32511718)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-267)||(241586-241717)
[»] chr5 (69 HSPs)
chr5 (142-267)||(7677703-7677828)
chr5 (136-267)||(39698533-39698664)
chr5 (141-267)||(30183546-30183672)
chr5 (136-267)||(21522742-21522873)
chr5 (136-267)||(21533308-21533439)
chr5 (136-267)||(21542022-21542153)
chr5 (139-261)||(19579696-19579818)
chr5 (106-198)||(14674231-14674323)
chr5 (136-262)||(15382469-15382592)
chr5 (136-203)||(6247614-6247681)
chr5 (136-262)||(31084315-31084435)
chr5 (136-203)||(21191056-21191123)
chr5 (136-219)||(21351889-21351972)
chr5 (136-203)||(33178017-33178084)
chr5 (142-267)||(37328782-37328905)
chr5 (106-220)||(6035445-6035558)
chr5 (137-204)||(10298562-10298629)
chr5 (136-267)||(36642699-36642829)
chr5 (136-202)||(42893352-42893418)
chr5 (137-206)||(13287396-13287465)
chr5 (136-262)||(19552488-19552610)
chr5 (139-203)||(21576745-21576809)
chr5 (135-202)||(30135304-30135372)
chr5 (136-203)||(8420019-8420086)
chr5 (144-262)||(17088284-17088398)
chr5 (128-221)||(41995454-41995546)
chr5 (106-267)||(43001762-43001917)
chr5 (136-204)||(41633727-41633795)
chr5 (136-267)||(3966495-3966626)
chr5 (136-199)||(7218271-7218334)
chr5 (152-235)||(12641682-12641765)
chr5 (136-199)||(24906305-24906368)
chr5 (152-267)||(30098334-30098449)
chr5 (136-195)||(4105249-4105310)
chr5 (147-221)||(40131624-40131698)
chr5 (139-203)||(15883982-15884047)
chr5 (131-206)||(5894830-5894903)
chr5 (135-267)||(6401489-6401621)
chr5 (144-196)||(15405062-15405114)
chr5 (208-267)||(26312822-26312881)
chr5 (136-203)||(28588674-28588741)
chr5 (165-211)||(12199951-12199997)
chr5 (139-201)||(17177025-17177087)
chr5 (131-267)||(27932222-27932347)
chr5 (152-267)||(2419865-2419979)
chr5 (136-221)||(21814253-21814338)
chr5 (128-184)||(27144446-27144503)
chr5 (142-267)||(32766879-32767004)
chr5 (223-267)||(38464320-38464364)
chr5 (136-203)||(43564875-43564940)
chr5 (106-206)||(2436878-2436984)
chr5 (151-206)||(6471886-6471941)
chr5 (136-267)||(11685931-11686061)
chr5 (136-179)||(22611761-22611804)
chr5 (151-220)||(36838550-36838620)
chr5 (208-262)||(42893413-42893467)
chr5 (104-184)||(9449429-9449509)
chr5 (135-184)||(14574068-14574117)
chr5 (206-267)||(21194070-21194131)
chr5 (144-213)||(22423802-22423871)
chr5 (135-184)||(35017028-35017077)
chr5 (135-196)||(38464371-38464432)
chr5 (136-196)||(6326304-6326364)
chr5 (144-184)||(6770543-6770583)
chr5 (143-199)||(12159951-12160007)
chr5 (215-267)||(17123108-17123159)
chr5 (136-184)||(22013406-22013454)
chr5 (151-203)||(30502388-30502440)
chr5 (151-203)||(30542731-30542783)
[»] chr4 (71 HSPs)
chr4 (135-267)||(24613637-24613769)
chr4 (136-267)||(47263978-47264109)
chr4 (128-261)||(19482651-19482785)
chr4 (128-267)||(3947708-3947842)
chr4 (151-267)||(30982814-30982930)
chr4 (136-267)||(23292933-23293053)
chr4 (107-206)||(12895113-12895211)
chr4 (136-261)||(22234832-22234958)
chr4 (114-203)||(54580023-54580111)
chr4 (136-262)||(16073387-16073501)
chr4 (136-221)||(4383360-4383444)
chr4 (136-257)||(27706123-27706244)
chr4 (128-203)||(21945486-21945562)
chr4 (151-262)||(847958-848069)
chr4 (136-203)||(12797338-12797404)
chr4 (108-205)||(30298910-30299008)
chr4 (108-205)||(30327778-30327876)
chr4 (111-206)||(11596349-11596445)
chr4 (106-200)||(24543942-24544038)
chr4 (151-267)||(30838217-30838333)
chr4 (136-203)||(49431017-49431085)
chr4 (137-267)||(715552-715674)
chr4 (137-267)||(752878-753000)
chr4 (136-203)||(12895274-12895341)
chr4 (136-267)||(28084513-28084636)
chr4 (136-267)||(36635316-36635442)
chr4 (136-195)||(40481629-40481687)
chr4 (151-201)||(29205451-29205501)
chr4 (136-202)||(35157986-35158052)
chr4 (151-262)||(28964200-28964300)
chr4 (137-201)||(6485613-6485677)
chr4 (139-203)||(34306804-34306867)
chr4 (135-203)||(38847012-38847080)
chr4 (136-203)||(42640518-42640588)
chr4 (136-203)||(2361975-2362042)
chr4 (144-203)||(4157150-4157208)
chr4 (136-206)||(50280873-50280945)
chr4 (144-213)||(51701258-51701327)
chr4 (192-251)||(5225565-5225624)
chr4 (136-206)||(12708138-12708209)
chr4 (121-180)||(32273549-32273608)
chr4 (208-255)||(40179595-40179642)
chr4 (136-259)||(15029757-15029875)
chr4 (136-206)||(16303263-16303333)
chr4 (142-203)||(8423718-8423779)
chr4 (165-262)||(19312356-19312453)
chr4 (139-220)||(40742586-40742667)
chr4 (139-203)||(4672085-4672149)
chr4 (145-267)||(14465012-14465133)
chr4 (144-259)||(15724498-15724609)
chr4 (231-267)||(17425354-17425390)
chr4 (152-266)||(31243484-31243599)
chr4 (136-267)||(5414108-5414239)
chr4 (136-195)||(11651142-11651201)
chr4 (153-267)||(21873309-21873421)
chr4 (153-267)||(21929170-21929282)
chr4 (165-203)||(6879465-6879503)
chr4 (215-261)||(29205528-29205574)
chr4 (165-247)||(37496725-37496807)
chr4 (151-221)||(38148707-38148777)
chr4 (136-198)||(40613442-40613504)
chr4 (198-267)||(16184874-16184943)
chr4 (230-267)||(17876241-17876278)
chr4 (230-267)||(18513182-18513219)
chr4 (230-267)||(22440564-22440601)
chr4 (135-204)||(31800477-31800546)
chr4 (203-263)||(4157484-4157544)
chr4 (166-202)||(28000743-28000779)
chr4 (230-262)||(32910638-32910670)
chr4 (151-195)||(37203271-37203315)
chr4 (165-213)||(44132634-44132682)
[»] scaffold0136 (1 HSPs)
scaffold0136 (152-262)||(3790-3900)
[»] scaffold0008 (1 HSPs)
scaffold0008 (151-262)||(263313-263424)
[»] scaffold0450 (1 HSPs)
scaffold0450 (136-267)||(8571-8702)
[»] scaffold0019 (1 HSPs)
scaffold0019 (106-267)||(71679-71848)
[»] scaffold0036 (1 HSPs)
scaffold0036 (136-267)||(9683-9814)
[»] scaffold0086 (1 HSPs)
scaffold0086 (165-267)||(2949-3051)
[»] scaffold0004 (3 HSPs)
scaffold0004 (136-267)||(92799-92934)
scaffold0004 (136-202)||(123617-123686)
scaffold0004 (156-204)||(83172-83220)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-211)||(20164-20239)
[»] scaffold0306 (1 HSPs)
scaffold0306 (136-267)||(13392-13518)
[»] scaffold0152 (1 HSPs)
scaffold0152 (136-267)||(21809-21935)
[»] scaffold0361 (1 HSPs)
scaffold0361 (136-194)||(14522-14580)
[»] scaffold0011 (1 HSPs)
scaffold0011 (137-202)||(17750-17815)
[»] scaffold0103 (1 HSPs)
scaffold0103 (136-195)||(51803-51862)
[»] scaffold0044 (1 HSPs)
scaffold0044 (136-267)||(53172-53303)
[»] scaffold0027 (1 HSPs)
scaffold0027 (136-203)||(46674-46741)
[»] scaffold0018 (2 HSPs)
scaffold0018 (136-202)||(178819-178886)
scaffold0018 (136-196)||(192256-192316)
[»] scaffold0652 (1 HSPs)
scaffold0652 (139-203)||(462-526)
[»] scaffold0793 (1 HSPs)
scaffold0793 (137-267)||(4828-4950)
[»] scaffold0246 (1 HSPs)
scaffold0246 (136-195)||(19568-19626)
[»] scaffold0122 (2 HSPs)
scaffold0122 (136-203)||(8002-8068)
scaffold0122 (136-262)||(8658-8784)
[»] scaffold0053 (1 HSPs)
scaffold0053 (136-203)||(8790-8857)
[»] scaffold0227 (1 HSPs)
scaffold0227 (106-195)||(7319-7403)
[»] scaffold0066 (1 HSPs)
scaffold0066 (106-191)||(33375-33464)
[»] scaffold0021 (1 HSPs)
scaffold0021 (136-200)||(130474-130538)
[»] scaffold0171 (2 HSPs)
scaffold0171 (128-206)||(23403-23482)
scaffold0171 (165-267)||(23532-23634)
[»] scaffold0025 (1 HSPs)
scaffold0025 (152-206)||(23777-23832)
[»] scaffold0123 (1 HSPs)
scaffold0123 (104-267)||(44461-44630)
[»] scaffold0050 (1 HSPs)
scaffold0050 (143-261)||(70277-70384)
[»] scaffold0007 (1 HSPs)
scaffold0007 (136-267)||(225204-225335)
[»] scaffold0020 (2 HSPs)
scaffold0020 (137-206)||(135309-135378)
scaffold0020 (165-236)||(137801-137872)
[»] scaffold0009 (1 HSPs)
scaffold0009 (230-267)||(188475-188512)
[»] scaffold0722 (1 HSPs)
scaffold0722 (143-203)||(7032-7092)
[»] scaffold0049 (1 HSPs)
scaffold0049 (151-202)||(63780-63831)
[»] scaffold0316 (1 HSPs)
scaffold0316 (192-254)||(16182-16244)
[»] scaffold0236 (1 HSPs)
scaffold0236 (152-206)||(25765-25819)
[»] scaffold0039 (1 HSPs)
scaffold0039 (136-254)||(84922-85040)
[»] scaffold0623 (1 HSPs)
scaffold0623 (135-268)||(5931-6064)
[»] scaffold0085 (1 HSPs)
scaffold0085 (136-197)||(26385-26446)
[»] scaffold0083 (1 HSPs)
scaffold0083 (170-203)||(45530-45563)
[»] scaffold1528 (1 HSPs)
scaffold1528 (136-184)||(1027-1075)
[»] scaffold0168 (1 HSPs)
scaffold0168 (152-220)||(21051-21119)
[»] scaffold0154 (1 HSPs)
scaffold0154 (186-262)||(13455-13531)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 28812389 - 28812648
Alignment:
Q  18 attctactctcttcaacaatgttactagagtaagtgttactgtatcataaggaaactttgtcttaaaattaggacactttgttatcaactatgaagcacg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812389 attctactctcttcaacaatgttactagagtaagtgttactgtatcataaggaaactttgtcttaaaattaggacactttgttatcaactatgaagcacg 28812488  T
Q  118 gatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagac 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812489 gatacagacaacggacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagac 28812588  T
Q  218 acgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgccacacaggtt 277  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||    
T  28812589 acgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcataggtt 28812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 34910279 - 34910391
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||     
T  34910279 ctatgaagcacggatacggacaccagacacgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgta 34910378  T
Q  206 ttggtgtcagaca 218  Q
    | |||||| ||||    
T  34910379 tcggtgtcggaca 34910391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 4987358 - 4987232
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||| |||||  ||||||| || ||| ||||||    
T  4987358 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacac 4987259  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
    | |||||||||||||||||||||||||    
T  4987258 cgggacacgcctaatccgaggagtgtc 4987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 14209079 - 14209236
Alignment:
Q  109 tgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttg 208  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||| |    
T  14209079 tgaagcacggatgcggaca-cagacacgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcg 14209177  T
Q  209 gtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| ||||||| || ||| ||||| | ||| || |||||||| || |||||| ||||    
T  14209178 gtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgc 14209236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 41961726 - 41961586
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| ||||||||| |||||||||||||||||| | ||||||| |||| ||||| ||||||||||||||||||||| ||| || ||||||| || |    
T  41961726 acagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgt 41961627  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || ||||||  |||||||||||||||||| |||||| ||||    
T  41961626 gtccgacactgggacacgcctaatccgagaagtgtccgtgc 41961586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 14216884 - 14217015
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| |||||||||||||||||| || | |||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||| || ||| ||||||    
T  14216884 gacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacac 14216983  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      |||||| ||||||||||| |||||| ||||    
T  14216984 tgggacacacctaatccgagaagtgtccgtgc 14217015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 14223013 - 14223144
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| |||||||||||||||||| || | |||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||| || ||| ||||||    
T  14223013 gacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacac 14223112  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      |||||| ||||||||||| |||||| ||||    
T  14223113 tgggacacacctaatccgagaagtgtccgtgc 14223144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 34185190 - 34185059
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||  |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||   |||| |||| || |  ||| ||||||    
T  34185190 gacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacac 34185091  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||||||||||| ||||    
T  34185090 cgggacacgcctaatccgaggagtgtccgtgc 34185059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 14829673 - 14829813
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||| |||||  ||||||| |  |    
T  14829673 acagacactgacacgccgacacagctaataatttgaa-aaatcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgt 14829771  T
Q  227 -gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     |||||||||| |||||||||||||| ||||| |||| ||||    
T  14829772 ggttcgacaccgggacacgcctaatctgaggaatgtccgtgc 14829813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 14832091 - 14832205
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||||||| ||| || ||||||| || ||| ||||||    
T  14832091 gacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacac 14832190  T
Q  236 caggacacgcctaat 250  Q
    | |||||||||||||    
T  14832191 cgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 17005677 - 17005555
Alignment:
Q  145 acacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacg 244  Q
    |||| |||||||||||||  |||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||  | || |||  |||||||||||||     
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacc 17005578  T
Q  245 cctaatccgaggagtgtctgtgc 267  Q
     |||||||||||||||| |||||    
T  17005577 tctaatccgaggagtgtttgtgc 17005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 15796361 - 15796236
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||||  |||||||||||| |||||| ||||||||||||| |||||| |||||||||||||| |||||| ||||| | || ||| | ||||    
T  15796361 gacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacac 15796262  T
Q  236 caggacacgcctaatccgaggagtgt 261  Q
    | | ||||||||||||| | ||||||    
T  15796261 cggaacacgcctaatccaaagagtgt 15796236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 20503429 - 20503577
Alignment:
Q  107 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    |||||||||||||||| ||||   ||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||||||||||||| |      
T  20503429 tatgaagcacggatacggacac--gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttg-- 20503524  T
Q  206 ttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
             ||||||| ||||||  |||||| ||||||||||||||||||||||||| ||||    
T  20503525 ---------gacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgc 20503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 8039902 - 8039771
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||| ||||  ||||||||||||  |||| | ||||||||||||| ||| | ||||||||||||||| |||||| |||| || |||||| ||||||    
T  8039902 gacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacac 8039803  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||| |||||||| |||| |||||||    
T  8039802 cgggacacgcttaatccgaagagtatctgtgc 8039771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 10954944 - 10955011
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  10954944 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcg 10955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 49651853 - 49651723
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||  ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| ||   | ||||||| |||| | ||||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcgg-accggacacgacacatatccgacac 49651755  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||| ||||||||||| |||||| ||||    
T  49651754 cgggacacacctaatccgagaagtgtccgtgc 49651723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 28917993 - 28918110
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||         ||||||| || ||| ||||||    
T  28917993 gacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg---------gacacgacacgtgtccgacac 28918083  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
      ||||||||||||||| |||||||||    
T  28918084 tgggacacgcctaatccaaggagtgtc 28918110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 55401070 - 55401187
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||           ||||||| || ||| |||||||      
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg-----------gacacgacacgtgtccgacaccga 55401158  T
Q  239 gacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||||||| ||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgc 55401187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 27505238 - 27505363
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||| ||||||||||  | ||||||||||||| |||||| |||||||||||||||||      ||||| ||||||| || ||| ||||||    
T  27505238 gacaagccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc------gtgtctgacacgacacgtgtccgacac 27505331  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||| ||||||||||||||||||| ||||    
T  27505332 cgggacatgcctaatccgaggagtgtccgtgc 27505363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 9800032 - 9800152
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||  ||||||||||||  |||| ||||||||| ||||| ||  ||||||||||||||||| ||| ||||| | ||||| |||  |||||    
T  9800032 gacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcggacac 9800131  T
Q  236 caggacacgcctaatccgagg 256  Q
    | |||||||||||||| ||||    
T  9800132 ctggacacgcctaatcggagg 9800152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 16000092 - 16000016
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| ||||||||||||||||||||||||| || |||| |||||||||||||||  |||||||||||||||||    
T  16000092 acagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg 16000016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 26508102 - 26508166
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 1509539 - 1509614
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    |||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| | |||||| |||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 8587088 - 8587021
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  8587088 gacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 21479110 - 21479177
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||| |||| |||||||||||||    
T  21479110 gacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcg 21479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 750685 - 750600
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||| ||||||||||||||||||||| | ||||||||||||  || | ||||||||||||||||||||| ||| || |||||||    
T  750685 gacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacga 750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 4991034 - 4990950
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||| |||||||  |||||| |||||  |||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  4991034 gacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacacg 4990950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 10335353 - 10335286
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||  |||||||||||||||||    
T  10335353 gacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 10335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 51206412 - 51206353
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 10268553 - 10268487
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||||  |||||||||||| ||||||||||||| |||||| ||||||||||| |||||    
T  10268553 gacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 21257054 - 21256984
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    |||||||  |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  21257054 cgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtg 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 25064901 - 25065024
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||  ||||| ||||||| ||||||||||||| |||||| ||  | |||| ||| ||||||||||||| ||||||| || |||  |||||    
T  25064901 gacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaatt--atgtgttggtatcgtgttggtgtcggacacgacacgtgtctgacac 25064998  T
Q  236 caggacacgcctaatccgaggagtgt 261  Q
    | |||||||  | |||||||||||||    
T  25064999 cgggacacggtttatccgaggagtgt 25065024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 22774167 - 22774071
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||||||| |||| ||||||| |||||| |||||| |||||||||| ||  || ||||||| ||||||||| ||| |||||||||||||    
T  22774167 ctatgaagcacggatacggaca-cagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtc 22774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 35994804 - 35994744
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  35994804 gacaagccgacacagctaataatttgaa-aaatcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 11610513 - 11610573
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    |||||||| ||||  |||||||||| || ||||||||||||||||||||||||||||||||    
T  11610513 gacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 25775500 - 25775568
Alignment:
Q  136 gacacgccgacacaactaataatttgaaga-aatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| |||||  |||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  25775500 gacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 40052294 - 40052367
Alignment:
Q  105 actatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattca 179  Q
    |||||||||||||||||| ||||   ||||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  40052294 actatgaagcacggatacggacac--gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 2620120 - 2620004
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||| |||||| ||||||  ||||||||||||| ||||||  |  | |||| |||||||||  ||||| |||||||| |||||| || ||     
T  2620120 gacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaact--atgtgttggtgtcgtggcggtgttagacacgacacatgtccggcat 2620023  T
Q  236 caggacacgcctaatccga 254  Q
    | |||||||||||||||||    
T  2620022 cgggacacgcctaatccga 2620004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 3631738 - 3631797
Alignment:
Q  209 gtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgcc 268  Q
    ||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgcc 3631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 8383249 - 8383316
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||  ||||||||||||  |||||| ||||||||||||| ||| ||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 14747553 - 14747624
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||||||| ||| |||||||||    
T  14747553 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgt 14747624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 25948939 - 25948884
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||| ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 26492272 - 26492205
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||| | ||||||||||||| |||||| | ||||||||||| |||||||| |||||||||    
T  26492272 gacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcg 26492205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 29508436 - 29508562
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||| |||| || |||||||||||||| |||||| ||||||||||||| ||| | ||||||      |||||||||| ||||||| ||| || ||||||    
T  29508436 gacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg-----atgttggtgtcggacacgacacacgtccgacac 29508530  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||| ||||||| || |||||| ||||    
T  29508531 cgggacacgtctaatccaagaagtgtccgtgc 29508562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 40993346 - 40993287
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    |||| |||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 40993287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 14979175 - 14979221
Alignment:
Q  138 cacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgta 14979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 39756228 - 39756298
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| || ||||||||| || ||||||||||||| | | || |||||||||||||||||||||    
T  39756228 gacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgt 39756298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||  ||||||||||||| |||||||||||||||||||| ||| | ||||||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 3164090 - 3164022
Alignment:
Q  138 cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||   |||||||| | ||||||||    
T  3164090 cacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgt 3164022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 11665951 - 11666067
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  |||||||| |||| |||||| ||| | ||||||||||||||||| ||| |||||||| || |||  || | | | |||||||||||    
T  11665951 ctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaat 11666050  T
Q  251 ccgaggagtgtctgtgc 267  Q
     | ||||||||| ||||    
T  11666051 tcaaggagtgtccgtgc 11666067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 38731225 - 38731277
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||| || |||||||||||||||||||||||| | ||||||||||||    
T  38731225 ctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 55212960 - 55213095
Alignment:
Q  141 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccagga 240  Q
    |||||||||  ||||||||| || ||||||||||||| |||| | |||||||||||||||| |||| |||||| | ||| | || ||| |||||||  ||    
T  55212960 gccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgaga 55213058  T
Q  241 cacgcctaatccgaggagtgtctgtgccacacaggtt 277  Q
    ||||| |||||| || ||| || |||| ||| |||||    
T  55213059 cacgcataatccaagaagtatccgtgctacataggtt 55213095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 16789020 - 16789134
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    ||||||||| || |||||| ||||||||||||| ||| |||||| ||||||||||  ||||| |||| || |||||| | ||| | |||||| ||||||     
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaaca-cgggacacacctaatt 16789118  T
Q  252 cgaggagtgtctgtgc 267  Q
     |||||||||| ||||    
T  16789119 tgaggagtgtccgtgc 16789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 18426941 - 18427008
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||||| ||| |  |||||||||||    
T  18426941 gacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcg 18427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 15314935 - 15314869
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggt 210  Q
    ||||||| || ||||||||| ||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  15314935 gacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgttggt 15314869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 16192818 - 16192732
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||| |||||||   |||||||||||  |||| ||||||||||||||| ||| | |||| | |||||||| ||||||||||||||    
T  16192818 cgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacga 16192732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 8593136 - 8593196
Alignment:
Q  144 gacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| ||| ||||||| || ||||||||||||||||| || ||||||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcg 8593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 12703999 - 12704047
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgta 12704047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 28678310 - 28678378
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    |||||||||| |  ||||||||||||| ||| || ||  | ||||||||||||||||||||||||||||    
T  28678310 ctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgttggtgtcagacac 28678378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 13806284 - 13806347
Alignment:
Q  192 gtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgag 255  Q
    ||||||||||||||| ||||| |||||| | |||||  |||| || ||||||||||||||||||    
T  13806284 gtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatccgag 13806347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 25775578 - 25775613
Alignment:
Q  226 tgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    ||| ||||||||||||||||||||||||||||||||    
T  25775578 tgtccgacaccaggacacgcctaatccgaggagtgt 25775613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 26290363 - 26290470
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||| | |||||||||||  |||||||||| ||| || || ||| | ||||| |||||||   |||||| || |||  |||||| ||||||    
T  26290363 gacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttccggtgtcggaaacggcacatgtccgacac 26290462  T
Q  236 caggacac 243  Q
    ||||||||    
T  26290463 caggacac 26290470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 35222930 - 35222997
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||||| | ||| |  ||||||||||||||| |||| ||| | ||||||||||||    
T  35222930 gacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 35222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 37991464 - 37991499
Alignment:
Q  105 actatgaagcacggatacagacaacagacacgacac 140  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37991464 actatgaagcacggatacagacatcagacacgacac 37991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 7171549 - 7171607
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    ||||||||||| ||||||| || ||| |||||||  |||||||||||||| ||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 33359722 - 33359820
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| || |   |||||||| ||||||| |||||| ||||||||||||| |  ||||||| || ||||||  |||||||||| ||||||    
T  33359722 ctatgaagcacggacaccggacacagacactgacacgctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcg 33359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 34307856 - 34307786
Alignment:
Q  128 acagacacga-cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||||| ||||| |||||  ||||||||||||  |||||||||| ||||||||| ||| ||||||||    
T  34307856 acagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 15812871 - 15812805
Alignment:
Q  153 aataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    ||||||||||  ||||||||||| |||||||| ||| |  || |||||||||||||||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattata--tgccggtgtcgtgttggtgtcggacacga 15812805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 24205025 - 24204988
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  24205025 cgacaccaggacacgcctaattcgaggagtgtccgtgc 24204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 25365533 - 25365574
Alignment:
Q  226 tgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||||||||| ||||| ||| |||||    
T  25365533 tgttcgacaccaggacacgcctaatctgaggaatgtatgtgc 25365574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 11252024 - 11252088
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||||||||| | || ||| || || | | ||||||||||||||||||||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgc 11252088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 11493428 - 11493380
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||| |||||| ||||||||| |||  ||||||||||||||||||||    
T  11493428 gacacgtcgacaccactaataatgtgagaaaatcacataattcagtgta 11493380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 39002044 - 39002100
Alignment:
Q  156 aatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgt 212  Q
    |||||||| ||||||||||||||| |||| ||| |  |||| |||||||||||||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattatatatgtcagtgtcgtgttggtgt 39002100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 24339634 - 24339758
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| || | | ||||||    
T  24339634 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacac 24339733  T
Q  236 caggacacgcctaatccgaggagtg 260  Q
    | |||||||||||||||||||||||    
T  24339734 cgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 267
Target Start/End: Complemental strand, 9408414 - 9408270
Alignment:
Q  124 gacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgat 222  Q
    |||| ||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||    
T  9408414 gacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgat 9408315  T
Q  223 acatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    | || | ||||||||  ||||||||||||||| || |||| ||||    
T  9408314 atatatccgacaccaaaacacgcctaatccgaagaatgtccgtgc 9408270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 7438698 - 7438829
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||||  |||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||| ||||||| |||||| |||||| ||||||    
T  7438698 gacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacac 7438797  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
     |||||||||||||| | ||||||||| ||||    
T  7438798 taggacacgcctaattcaaggagtgtccgtgc 7438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 26033513 - 26033402
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||||| || || ||| ||| |||  ||||| ||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaat 26033414  T
Q  251 ccgaggagtgtc 262  Q
    ||||||||||||    
T  26033413 ccgaggagtgtc 26033402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 5409903 - 5409778
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| || ||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||      ||||| ||||||| || ||| ||||||    
T  5409903 gacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtc------gtgtcggacacgacacgtgtccgacac 5409810  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||||||||||| ||||    
T  5409809 cgggacacgcctaatccgaggagtgtccgtgc 5409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 18215283 - 18215183
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacga-cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||| |||||| | ||||| | ||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18215283 ctatgaagcacggatgcagaca-cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgt 18215185  T
Q  205 gt 206  Q
    ||    
T  18215184 gt 18215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 43027536 - 43027411
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| |||| || ||||||||||||| |||||||||||| |||||||  ||||||||||||||||      ||||||||||||| || ||| ||||||    
T  43027536 gacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc------gtgtcagacacgacacgtgtccgacac 43027443  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||| ||||||| ||||    
T  43027442 cgggacacgcctaatccgatgagtgtccgtgc 43027411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 6630979 - 6630849
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||| |||||||||||||  || |||| |||||||||||| ||| | |||||| ||||||||||||||| ||||| | || ||  ||||||    
T  6630979 gacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacac 6630880  T
Q  236 caggacacgcctaatccgaggagtgtctgtg 266  Q
    || ||||| ||||||| ||||||||| ||||    
T  6630879 caagacacacctaatctgaggagtgtgtgtg 6630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 21560490 - 21560587
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgt 228  Q
    |||||||||| ||| |||||||||||||||||     ||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||    
T  21560490 gacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgt 21560587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 27229349 - 27229252
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||||||||| |||||| ||| |||| ||||||||||||   ||||||||||||||| |||||||||| |||||||||||||| |||||| ||||    
T  27229349 aaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaattcgaggaatgtc 27229252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 32308112 - 32308237
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||  | ||||| ||||||||| |||||  ||||||| |||||| ||||||    
T  32308112 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacac 32308211  T
Q  236 caggacacgcctaatccgaggagtgt 261  Q
    |  |||||  ||||||||||||||||    
T  32308212 cgagacacagctaatccgaggagtgt 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 11272652 - 11272569
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacata--attcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  11272652 acgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 8234138 - 8234205
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  8234138 gacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcg 8234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 25481894 - 25481961
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 3991322 - 3991384
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 25822647 - 25822773
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||| |||   || ||||||||||| ||||||||||||||||||| | ||| || ||||||| || |||  ||||     
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacat 25822746  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
    | ||||| ||||||||  |||||||||    
T  25822747 cgggacatgcctaatctaaggagtgtc 25822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 27945033 - 27945103
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||    
T  27945033 gacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 9778500 - 9778617
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacac 243  Q
    |||||| || |||||||||| ||||||||||||||||| || |||||||||||||||||      ||||| ||||| | || ||| ||||||| ||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc------gtgtcggacacaacacgtgtccgacaccgggacac 9778593  T
Q  244 gcctaatccgaggagtgtctgtgc 267  Q
    ||||||||| ||||||||| ||||    
T  9778594 gcctaatccaaggagtgtccgtgc 9778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 11665507 - 11665407
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| || ||| |||||||| |||| ||| ||||||  |||||| || ||| ||||||    
T  11665507 gacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacac 11665408  T
Q  236 c 236  Q
    |    
T  11665407 c 11665407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 32094079 - 32093967
Alignment:
Q  145 acacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacacc-aggaca 242  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||      ||||| ||||||| || ||| |||||||  |||||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtc------gtgtcggacacgacacgtgtccgacaccggggaca 32093986  T
Q  243 cgcctaatccgaggagtgt 261  Q
    |||||||||||||||||||    
T  32093985 cgcctaatccgaggagtgt 32093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 11831402 - 11831540
Alignment:
Q  114 cacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||||||| ||||   ||||||||||  ||||||||||||||||||||| |||||| |||||| |||||| |||||||| |  ||||||| | ||||||    
T  11831402 cacggatacggacactggacacgacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagtattcgtgtcgtatcggtgtc 11831501  T
Q  214 agacacgatacatgttcgacaccaggacacgcctaatcc 252  Q
     ||||||| |  |||| |||||| |  ||||||||||||    
T  11831502 ggacacgacatgtgtttgacaccggagcacgcctaatcc 11831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 21880159 - 21880264
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||||||||||||           ||||||| |||||| |||||||||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacatgtccgacaccaggacacgcctaat 21880247  T
Q  251 ccgaggagtgtctgtgc 267  Q
    ||||| |||||| ||||    
T  21880248 ccgagaagtgtccgtgc 21880264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 2334271 - 2334367
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||||||||| |||||| |||||||||||||||||||| | ||||| ||||||| |||||| ||||||    ||||| |||||||||||||||||    
T  2334271 aaatcacataatttagtgtaattacaagtgtcggtgtcgtg-tcgtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtc 2334367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 13770686 - 13770808
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    ||||||||||| |||||||||| || |||| ||||||||||||||| |||||||||||| ||||      ||||| ||||| | || ||| ||||||| |    
T  13770686 acgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtc------gtgtcggacacaacacgtgtccgacaccgg 13770779  T
Q  239 gacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||||||||||| ||||||| ||||    
T  13770780 aacacgcctaatccgaagagtgtccgtgc 13770808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 259
Target Start/End: Original strand, 15902805 - 15902937
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| |||| |||||||| | |||||||||||  ||||||||||||| |||||| ||| | |||||||||| |||| ||| || ||||||| ||||    
T  15902805 acagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacat 15902904  T
Q  227 gttcgacaccaggacacgcctaatccgaggagt 259  Q
    |  ||| |||||||||||| ||||  |||||||    
T  15902905 gcccgagaccaggacacgcttaatttgaggagt 15902937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 35861957 - 35862024
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||  ||||||| |||||||    
T  35861957 acacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 7197394 - 7197297
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||  ||| ||||||  |||||||||||||| |||||||||| || ||||||  ||||||| |||| ||||||||||||||||||    
T  7197394 ctatgaagcacggatacgaaca-cagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcg 7197297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 11061143 - 11061077
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| |||||||| ||||||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  11061143 gacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 18039006 - 18039067
Alignment:
Q  152 taataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgt 212  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 7058429 - 7058488
Alignment:
Q  147 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||||||| ||||||  |||||||||||| |||||||||| ||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgt 7058488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 19206043 - 19206122
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcaga 216  Q
    ||||||||||||  ||||||||||||  ||||||||||||||| | || ||| | ||||||||||| |||||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcaga 19206122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 24105670 - 24105737
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| ||||  ||| |||||||||| ||||||||||||| ||||    
T  24105670 gacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcg 24105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 40287423 - 40287361
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    |||||||||||||||| ||||||||||| |||||| || |||||||||| ||||||||||||||    
T  40287423 gacacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcggt 40287361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 15680771 - 15680868
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||| ||||   ||||| |||||||||||| | |||||||||  || ||||||||||||| |||||| ||| ||||||||||||||    
T  15680771 ctatgaagcacggatacggacatg-gacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15680868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 28155563 - 28155629
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  ||||||||||||  |||| ||||||||| ||||| ||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 33994204 - 33994270
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||| |||||| ||||||||| |  ||||||||||||||| | |||||||||||||||||    
T  33994204 gacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 1885587 - 1885648
Alignment:
Q  158 tttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    |||||| |||| |||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  1885587 tttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgttggtgtcggacac 1885648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 13300410 - 13300479
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||| ||||||||||||||| |||||| ||||||||||||| |||| ||| |||||||| ||| ||||||    
T  13300410 gacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtcatgtcggtgtc 13300479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 25791616 - 25791727
Alignment:
Q  107 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    |||||||||||||||| |||| ||||||| |||||||||||||  ||||| ||||||  || ||||||||| || |||||||| | ||||||||||||||    
T  25791616 tatgaagcacggatacggaca-cagacactgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcgtg 25791713  T
Q  206 ttggtgtcagacac 219  Q
    | | ||||| ||||    
T  25791714 tagatgtcaaacac 25791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 598256 - 598320
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||||||||||| || ||| ||||||| |||||||||||||||||| |||||| ||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgc 598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 19992001 - 19992061
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||| ||||||||||||  |||||||||| ||||||||| ||| |||||||||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 38134457 - 38134342
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||  |||| |||||||||| |||| | | | |||||||| || ||| |||||  ||| |||||  | ||||||| | ||||||||||||||    
T  38134457 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcggtctcatgtgggtgttggactcgataagtattcgacatcgggacacgcctaatc 38134358  T
Q  252 cgaggagtgtctgtgc 267  Q
    |||||||||| |||||    
T  38134357 cgaggagtgtatgtgc 38134342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 26329458 - 26329364
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||| ||||||||||||    |||||||||||  ||| |||| ||||||||||| ||| | ||||||| ||||||| ||||||||||||||    
T  26329458 acagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacga 26329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 29763241 - 29763187
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttaca 190  Q
    ||||| || |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  29763241 gacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttaca 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 10042930 - 10042999
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| |||||||||||||  || |||||||||| || ||| ||| ||||||| |||||||||    
T  10042930 acacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgt 10042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 1433446 - 1433571
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||   |||||||||||  ||||||||| |||  ||||| ||| | ||||||||||||||| ||      ||| || |  ||| ||||||    
T  1433446 gacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcgg------acaagacatgtgtccgacac 1433539  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||| ||||||||||||||||| ||||    
T  1433540 caggacacgtctaatccgaggagtgtccgtgc 1433571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 13557820 - 13557750
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtg 194  Q
    |||||||| |||||||||||| |||||||||||| || |||   ||||||||||||||||| |||||||||    
T  13557820 acagacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 19213810 - 19213862
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||| || |||||||||||| |||||||  |||||||||||||||||    
T  19213810 ctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 19213862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 22868034 - 22868082
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||||| ||||||||| |||  ||||||||||||||||||||    
T  22868034 gacacgccgacaccactaataatatgagaaaatcacataattcagtgta 22868082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 43249985 - 43250116
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac-gatacatgttcgaca 234  Q
    |||||||||||||   |||||||||||  |||| ||||||| ||||||| ||| |||||||| |||||   | | ||| ||||| ||  | ||| |||||    
T  43249985 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg-tgtcggtgtcgcgtcggacactgacgcgtgtccgaca 43250083  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||| ||||||||||| ||||    
T  43250084 ccaggacacgcctaattcgaggagtgtccgtgc 43250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 5835242 - 5835305
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||| ||||||| |||||  |||| ||||||||||||||| ||| | |||||||||||    
T  5835242 acgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 6028633 - 6028732
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||| | || |||||||| | |||| |||||| ||||||||||||||  |||||  |||||| ||  |||||||||   |||||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 20549783 - 20549850
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| |||||||  ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  20549783 gacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 26733296 - 26733363
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| ||||||  ||||||||||||  ||||||||||||||||| || ||| | ||||||||||||    
T  26733296 gacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 29763187 - 29763136
Alignment:
Q  216 acacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| || ||| ||||| ||||||||||||||||||||||||||| ||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgc 29763136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 29787435 - 29787388
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgta 29787388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 11890970 - 11890916
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| ||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgt 11890916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 18013133 - 18013071
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||| ||||||||||| || |||| ||||||||||||||| ||| | ||||| |||||||||    
T  18013133 gacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 21826266 - 21826332
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||| || | | | ||||||||||||    
T  21826266 acacgccgacacgactaataatttaaaaaaatcacataactcagtctaataatatgtgtcggtgtcg 21826332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 22602777 - 22602707
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||    ||| ||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  22602777 gacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 21864863 - 21864920
Alignment:
Q  210 tgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| ||||||| || ||| ||||||| ||||||| ||||| ||||||||||||||||    
T  21864863 tgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgc 21864920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 23128728 - 23128651
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||||| ||||| | |||||||||||  ||| || ||||||||||||| | | | |||||||||| |||||||||||    
T  23128728 gacacgctgacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtc 23128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 33994265 - 33994318
Alignment:
Q  208 ggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    |||||||||||||| |||||| | |||||  |||||||||||||| ||||||||    
T  33994265 ggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgt 33994318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 41020488 - 41020553
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||| ||||||||||||||||||  | ||||||||||||| |||||| ||| | | ||||||||    
T  41020488 gacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 5307310 - 5307362
Alignment:
Q  209 gtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    |||||| ||| |||| |||| |||||| |||||||||||||||| ||||||||    
T  5307310 gtgtcatacaagatagatgtgcgacactaggacacgcctaatccaaggagtgt 5307362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 14077434 - 14077386
Alignment:
Q  214 agacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||||  ||||| |||||||||||||||||| | ||||||||||||    
T  14077434 agacacgacgcatgtccgacaccaggacacgccttaaccgaggagtgtc 14077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 14387462 - 14387414
Alignment:
Q  214 agacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||||  ||||| |||||||||||||||||| | ||||||||||||    
T  14387462 agacacgacgcatgtccgacaccaggacacgccttaaccgaggagtgtc 14387414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 35862027 - 35862063
Alignment:
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgc 35862063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 40287353 - 40287309
Alignment:
Q  223 acatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| ||||||| ||||| ||||||||||||||||||| ||||    
T  40287353 acatgtccgacaccgggacatgcctaatccgaggagtgtccgtgc 40287309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  158 tttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||| ||||||||||||||| |||| ||||| |||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 37419704 - 37419866
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||| |||| | ||||| ||||||||||||   | ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||    
T  37419704 ctatgaagcacggatacggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgt 37419803  T
Q  205 gttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || |||||| |||||||| | ||| ||||||| ||||||||||||||||||||||||| ||||    
T  37419804 gtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 37419866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 36756420 - 36756280
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |||||  |||| | ||||    
T  36756420 acagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacat 36756321  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || |||||||   ||||||||||||| ||||||||||||||    
T  36756320 gtccgacaccgcaacacgcctaatcctaggagtgtctgtgc 36756280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 15657857 - 15657982
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacacc 236  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||| |||| ||| ||| || ||| |||| ||    
T  15657857 acacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgcc 15657956  T
Q  237 aggacacgcctaatccgaggagtgtc 262  Q
     ||||||||||| |||||||||||||    
T  15657957 gggacacgcctagtccgaggagtgtc 15657982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 30717591 - 30717466
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    |||||| | ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| | |||| ||||||| || ||||||||||  |||     
T  30717591 ccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggat 30717492  T
Q  242 acgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||| ||||||||| ||||    
T  30717491 acgcctaatccaaggagtgtccgtgc 30717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 11223930 - 11223800
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||| |||||| |||||| |||| ||||||||||||||| ||||||||||||||||| ||| |||||| ||||||| || |||  |||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacac 11223832  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||| |||||||||| ||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgc 11223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 26769503 - 26769634
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||| | ||||||| ||   ||||| ||||||||||||||||| ||| ||| || ||||||| || ||| ||||||    
T  26769503 gacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacac 26769602  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||||||||||||||||||||| ||||    
T  26769603 tgggacacgcctaatccgaggagtgtccgtgc 26769634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 2438783 - 2438666
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    |||| |||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||           ||||||| |||||| ||||||| |    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacatgtccgacaccgg 2438695  T
Q  239 gacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||||||| ||||    
T  2438694 gacacgcctaatccgaggagtgtccgtgc 2438666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 37558939 - 37559036
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||| ||||||||||| | ||||||||||||||| |||| ||||||||||||||||||    
T  37558939 ctatgaagcacggatacggaca-cggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 18841080 - 18840960
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||||||||||||||||| |||| |||||||| |||||| |||||||||||||           |||||||||||| |||||| ||||||    
T  18841080 gacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcgg-----------tgtcagacacgacacatgtccgacac 18840992  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||| |||||||||||||||||| ||||    
T  18840991 cgggacacacctaatccgaggagtgtccgtgc 18840960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 4882748 - 4882640
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||| ||||||| |||| | ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||  | |||| | |||| ||||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgtcgggcacctgaacacacctaat 4882649  T
Q  251 ccgaggagt 259  Q
     ||||||||    
T  4882648 tcgaggagt 4882640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 19536465 - 19536397
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  19536465 gacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 974746 - 974812
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 209  Q
    ||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttgg 974812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 12668490 - 12668420
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||    
T  12668490 gacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgt 12668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 44860327 - 44860443
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  ||||| |||||||||||||| ||| | |||||||||||||||||||||  ||||||| |  ||| ||||| | |||||| ||||||    
T  44860327 ctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaat 44860426  T
Q  251 ccgaggagtgtctgtgc 267  Q
     ||||||||||| ||||    
T  44860427 tcgaggagtgtccgtgc 44860443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 15972865 - 15972932
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  15972865 gacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcg 15972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 18421955 - 18422022
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||    
T  18421955 gacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 34785049 - 34784918
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||| ||||||||||||||  ||| |  ||||||||||||| |||||| ||| | ||||||||||||||| ||| || ||||||| || |||  |||||    
T  34785049 gacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacac 34784950  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      |||||||||| || ||||||||||||||||    
T  34784949 ggggacacgccttattcgaggagtgtctgtgc 34784918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 20539741 - 20539672
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    |||||| ||||||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||    
T  20539741 gacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 23058510 - 23058433
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgt 212  Q
    |||||||| |||||| |||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  23058510 gacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt 23058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 30335411 - 30335476
Alignment:
Q  138 cacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||| |||||| |||||||||||    
T  30335411 cacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 30404952 - 30404850
Alignment:
Q  106 ctatgaagcacggatacagaca----acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||||||||||||||| ||||    || ||||| |||||||||||||   |||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  30404952 ctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcg 30404853  T
Q  201 tcg 203  Q
    |||    
T  30404852 tcg 30404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 18420501 - 18420370
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||| ||||  ||||||||||||  ||||||||||||||| || | ||| |||||||||||| ||||   |||| |||| || |  |||||||||     
T  18420501 gacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcgacat 18420402  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
     | ||||||||||||||||| |||||||||||    
T  18420401 tatgacacgcctaatccgagaagtgtctgtgc 18420370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 21374765 - 21374706
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  21374765 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 38117226 - 38117159
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||||||||| ||| ||||| |||||||||| |||||||    
T  38117226 gacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcg 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 33153416 - 33153486
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||| ||| ||||| |||| || |||||||||||||||||||| ||||||||||| |||||||||    
T  33153416 gacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgt 33153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 20473305 - 20473381
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| |||| |||||||||||||||||||| || || ||| ||||||||||||| |||||||||||| |||||    
T  20473305 acagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcg 20473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 35056896 - 35056991
Alignment:
Q  172 ataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||| ||| | ||||||||||||||| |||||| ||||||| || ||| ||||||    |||||||||||| |||||||||| ||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgc 35056991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 21782885 - 21782751
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagtta----caagtgtcggtgtcgtgttggtgtcagacacgatacatgttcg 231  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| |||    |  ||||| |||| ||||||||||||| ||||| || ||| |     
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattatgtgccggtgtc-gtgttgtgttggtgtcaggcacgacacgtgtcca 21782787  T
Q  232 acaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| ||||||| |||||| | |||||||| ||||    
T  21782786 acaccgggacacgtctaatctgtggagtgtccgtgc 21782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 24894381 - 24894451
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||| |||||||||| || |||||||||||||||||| | ||| |||||| ||| ||||||    
T  24894381 gacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgt 24894451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 5367198 - 5367251
Alignment:
Q  150 actaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||    
T  5367198 actaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 21624249 - 21624326
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatca-cataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| |||||||||||||| |||||||||| || |||  | |||||||||||||| ||||||||||||||||||    
T  21624249 acagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 6940247 - 6940310
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    |||||||||||||| |||||||||| || || | |||||||| |||||| ||||||||||||||    
T  6940247 gacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 14996291 - 14996224
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||| ||||||||| ||||||||||||| ||| ||| |||||| |||||| |||||||||||||||||    
T  14996291 gacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 20242794 - 20242727
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||||||  ||| |  |||||||||||||||||||| ||| | ||||||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 4207857 - 4207973
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacac 243  Q
    ||||| |||||||||||||| ||| | ||||||| |||||| ||| |  ||||||| |||||| |||||| ||||||| || |||||||||||   ||||    
T  4207857 gacaccactaataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacac 4207955  T
Q  244 gcctaatccgaggagtgt 261  Q
    |  |||||||| ||||||    
T  4207956 gtttaatccgaagagtgt 4207973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 5040729 - 5040793
Alignment:
Q  141 gccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| ||| ||||||||||||| |||  |||||||||||| |||| ||||||||||||||||||    
T  5040729 gccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 5040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 18889643 - 18889530
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagaca-cgatacatgttcgacaccaggacacgcctaa 249  Q
    ||||||| ||||  |||||||||||||||||||| | | | ||||||||||| |||| ||||| |||| |||  ||||| ||||||| |||||| |||||    
T  18889643 ctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaa 18889544  T
Q  250 tccgaggagtgtct 263  Q
     || || |||||||    
T  18889543 cccaagtagtgtct 18889530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 28677904 - 28677949
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagtgta 28677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 35449561 - 35449621
Alignment:
Q  209 gtgtcagacacgatacatgttcgacaccaggacacg--cctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||| |||||| ||||||||| |||||   ||||||||||||||||||||||    
T  35449561 gtgtcagacacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgc 35449621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 12224271 - 12224335
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||| |||||||||| ||| ||||||  ||||||||||||||| |||||||| |||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgc 12224335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 21616754 - 21616802
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  21616754 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 21616802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 36409689 - 36409612
Alignment:
Q  141 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||||  || |||||||||| ||||||||||||| |||||| ||  | ||||||||||| |||||||||| ||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaatt--atgtgtcggtgtcatgttggtgtctgacacg 36409612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 6045968 - 6045898
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    ||||||||||||  |||||| | ||||||  ||||||| | |||||||||| ||||||||||| |||||||    
T  6045968 ctaataatttgataaaatcatacaattcaaagtagttatatgtgtcggtgtggtgttggtgtcggacacga 6045898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 261
Target Start/End: Complemental strand, 10535728 - 10535698
Alignment:
Q  231 gacaccaggacacgcctaatccgaggagtgt 261  Q
    |||||||||||||||||||||||||||||||    
T  10535728 gacaccaggacacgcctaatccgaggagtgt 10535698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 27084254 - 27084377
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||| |||||||  ||||||||||||  |||||| |||||||| ||||     |||||||| | || ||| |||||| ||||||| || ||| | ||||    
T  27084254 gacactccgacactgctaataatttgagaaaatcatataattcaatgtat----aagtgtcgatttcatgtcggtgtcggacacgacacgtgtccaacac 27084349  T
Q  236 caggacacgcctaatccgaggagtgtct 263  Q
    |  ||||||||||||| |||||||||||    
T  27084350 cgagacacgcctaatcggaggagtgtct 27084377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 28524447 - 28524501
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    |||||||||||||||||||| ||| | |||||| ||| ||||||||||| |||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacac 28524501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 42832343 - 42832277
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| |||||||  ||||||||||||  |||| ||||| ||||||||| ||| |||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 15528362 - 15528451
Alignment:
Q  154 ataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac-gatacatgttcgacaccaggaca 242  Q
    |||||||||| |||||||| |||||| |||| ||  |  ||||||||||||||| |||||||| || || ||||||| ||||||| ||||    
T  15528362 ataatttgaaaaaatcacacaattcaatgtaattgaatttgtcggtgtcgtgttagtgtcagatactgacacatgtttgacaccaagaca 15528451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 27286394 - 27286228
Alignment:
Q  106 ctatgaagcacggatacagaca----acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    |||||||||||||| |||||||    || ||||| || |||||||||   ||||||||||||  | ||||||||||| |||||| ||| | |||||  ||    
T  27286394 ctatgaagcacggacacagacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtcaatg 27286295  T
Q  201 tcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || ||| | |||| ||||||| |||||| ||||||| |||||   ||||||  | ||||||||||||    
T  27286294 tcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgc 27286228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 29367446 - 29367381
Alignment:
Q  128 acagacacg-acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaa 191  Q
    ||||||||| |||||||| ||||| ||||||||| || ||| ||||||||||||||||| ||||||    
T  29367446 acagacacggacacgccggcacaattaataattttaaaaaaatcacataattcagtgtaattacaa 29367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 38442309 - 38442366
Alignment:
Q  146 cacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||| |||| || ||||||||||||||| | || ||| ||||||||||||||    
T  38442309 cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 39323271 - 39323316
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||||||||||  |||| ||||||||||||||| |||||||||||    
T  39323271 ctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 44635520 - 44635557
Alignment:
Q  166 aatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcg 44635557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 18422582 - 18422526
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttga 162  Q
    |||| ||||||||||||||||| |||||||||||| |||| ||  | ||||||||||    
T  18422582 ctataaagcacggatacagacatcagacacgacacaccgataccgcaaataatttga 18422526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 18622612 - 18622668
Alignment:
Q  150 actaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||| |  |||||||||||||||||||| ||| | |||| ||||||||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgt 18622668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 23718018 - 23718082
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||| |||||||  ||||||||||||  || ||||||||||||||||| ||| | |||||||||    
T  23718018 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 24105690 - 24105754
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||| |||||||  ||||||||||||  || ||||||||||||||||| ||| | |||||||||    
T  24105690 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 28596517 - 28596581
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||| ||||||| || ||| ||||||  |||||| |||||||||||||||||| ||||    
T  28596517 gtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgc 28596581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 29176559 - 29176495
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||| ||||||  |||||||||||| |  ||||||||||||||||| ||| |||||| |||||    
T  29176559 acacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 34691857 - 34691805
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  |||||| ||||||||||||| ||| | ||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 34714269 - 34714217
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  |||||| ||||||||||||| ||| | ||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 47989481 - 47989620
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||    
T  47989481 acagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacat 47989579  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||  |||| | ||||||||||||||||||||||||| ||||    
T  47989580 gtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 267
Target Start/End: Original strand, 9828021 - 9828167
Alignment:
Q  121 acagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||| | |||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||  | |||||||||||||||  ||||||||||||    
T  9828021 acagacaccggacacgacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacg 9828120  T
Q  221 atacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    | || ||| ||||||| ||||||| ||||||||||||||||| ||||    
T  9828121 acacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 9828167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 6612238 - 6612112
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||| |||  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| | |||| |||||||||  ||| ||||||    
T  6612238 gacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacac 6612139  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
    ||||||||||||||||| |||||||||    
T  6612138 caggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 1486776 - 1486651
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||      ||||| ||||||| || ||| ||||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc------gtgtcggacacgacacgtgtccgacac 1486683  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||||||||||||||||    
T  1486682 cgggacacgcctaatccgaggagtgtctgtgc 1486651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 6332671 - 6332793
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacac 243  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||  |  ||||||||||   |||||||||||     
T  6332671 gacacaactaataatttgaa-aaatcacataattcagtgtaattacaagtatcggtgtcgtgttggtgtcgaatgcgatacatgtctaacaccaggacat 6332769  T
Q  244 gcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||| ||||||||||||    
T  6332770 gcctgatccgatgagtgtctgtgc 6332793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 40917743 - 40917872
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| ||||||||  ||| |||||| |||||||| |||||||||||| |||||  ||||||| || ||| ||||||    
T  40917743 gacacgccgacacagctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacac 40917840  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||||||||| |||| ||||    
T  40917841 cgggacacgcctaatccgaggactgtccgtgc 40917872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 5944264 - 5944400
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatac 224  Q
    |||||||| ||||||||| |||| ||||||||||||| |||  ||||||||||||||||| ||| ||||||||||||||||| | || | ||||| | ||    
T  5944264 acagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacac 5944363  T
Q  225 atgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    |||| ||||||| ||| ||||||||||||||||||||    
T  5944364 atgtccgacaccgggatacgcctaatccgaggagtgt 5944400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 267
Target Start/End: Complemental strand, 31694764 - 31694646
Alignment:
Q  151 ctaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgccta 248  Q
    ||||||||||||| |||  |||||||||||||| || ||||||||||||||||||||| |||||| ||||| | |||| ||||||||| | |||||||||    
T  31694764 ctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgccta 31694665  T
Q  249 atccgaggagtgtctgtgc 267  Q
    ||| |||||||||| ||||    
T  31694664 atctgaggagtgtccgtgc 31694646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 24577253 - 24577183
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24577253 gacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 40258994 - 40258885
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||           |||||||||||| || ||| ||||||||||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg-----------tgtcagacacgacacctgtccgacaccaggac 40258906  T
Q  242 acgcctaatccgaggagtgtc 262  Q
    |||||||||||||||||||||    
T  40258905 acgcctaatccgaggagtgtc 40258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 267
Target Start/End: Complemental strand, 18556548 - 18556392
Alignment:
Q  111 aagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 209  Q
    |||||||||||| |||| | ||||| |||||||||||||| ||||||||||||| | ||||||||||| | |||| |||||||| | |||||||||  ||    
T  18556548 aagcacggatacggaca-cggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtgacgg 18556450  T
Q  210 tgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||| ||| || | | ||||||  |||||||||||||||||| |||||| ||||    
T  18556449 tgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgc 18556392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 38078728 - 38078616
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||           ||||||| |||||||| ||||    
T  38078728 gacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg-----------gacacgacacatgttcaacac 38078640  T
Q  236 caggacacgcctaatccgaggagt 259  Q
    ||||||||||||||||||||||||    
T  38078639 caggacacgcctaatccgaggagt 38078616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 6427453 - 6427587
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcga 232  Q
    |||| ||||||||||||||||||||||| |||   |||||||||||| ||||  |||||||||| ||||||||| || ||| ||||||| || ||| |||    
T  6427453 gacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccga 6427552  T
Q  233 caccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||||||||||| || ||||||| ||||    
T  6427553 caccgggacacgcctaatctgatgagtgtccgtgc 6427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 22881683 - 22881616
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  22881683 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 32461530 - 32461400
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||| |||||||||||||||||| ||||||||||||| | |||| |||||||||| ||||| |||| |||||| ||||||| || |||  |||||    
T  32461530 gacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacac 32461432  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||||||||||| || |||||| ||||    
T  32461431 tgggacacgcctaatccaagaagtgtccgtgc 32461400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 113291 - 113361
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  113291 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 37598793 - 37598890
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| ||||||| ||||||| | ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||    
T  37598793 ctatgacgcacggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcg 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 46348479 - 46348383
Alignment:
Q  107 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||| |||| | ||||| |||||||||||||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||||||    
T  46348479 tatgaagcacggatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 1705060 - 1704989
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  1705060 cgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgt 1704989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 22515954 - 22515834
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||           ||||||| |||| | ||||||    
T  22515954 gacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg-----------gacacgacacatatccgacac 22515866  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    |  |||||||||||||||||||||||| ||||    
T  22515865 cgagacacgcctaatccgaggagtgtccgtgc 22515834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 10572656 - 10572572
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||||||||| |||||||||||||  |||||||||||||| ||||| ||| | |||||||||| ||||||||||||| ||||    
T  10572656 gacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgtcaggcacg 10572572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 42359516 - 42359449
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  42359516 gacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 1815249 - 1815362
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||||| |||| |||| || |||||||||||||||||||| |||||||||||||||||            ||||||| |||||| ||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtcc-----------gacacgacacatgtccgacac 1815337  T
Q  236 caggacacgcctaatccgaggagtg 260  Q
    | |||||||||||||| ||||||||    
T  1815338 cgggacacgcctaatctgaggagtg 1815362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 14359623 - 14359529
Alignment:
Q  106 ctatgaagcacggatacagaca----acagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||||||||||||||| ||||    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  14359623 ctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttgaa-aaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 16164366 - 16164252
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||| ||||||||||||| | |||| ||| | |||||  ||||||||||||||  ||| | | || ||| ||||||||||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatc 16164267  T
Q  252 cgaggagtgtctgtg 266  Q
    ||| |||||| ||||    
T  16164266 cgaagagtgtatgtg 16164252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 25361881 - 25362005
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    |||||||||| ||| |||||||||  |||||||||||||||||||| ||| | ||||| ||||||||| |||||| ||||||  |||||| ||||||| |    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacg--acatgtccgacaccgg 25361978  T
Q  239 gacacgcctaatccgaggagtgtctgtgc 267  Q
     |||  |||||||||| ||||||| ||||    
T  25361979 aaca--cctaatccgaagagtgtccgtgc 25362005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 9629952 - 9629859
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacg 244  Q
    ||||||||||||  |||||| ||||||||||||  ||| ||||||||||||||||| | |||| ||||||| |||||| ||||||| |||||||    
T  9629952 ctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacg 9629859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 51409973 - 51410084
Alignment:
Q  98 gttatcaactatgaagcacggatacagacaacagacac------gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttaca 190  Q
    ||||||| ||||||||||||||||| |||| | |||||      |||| ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  51409973 gttatcatctatgaagcacggatacggaca-cggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattaca 51410071  T
Q  191 agtgtcggtgtcg 203  Q
    |||||||||||||    
T  51410072 agtgtcggtgtcg 51410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 19058923 - 19058856
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| |||||||||| || | || ||||||||||||||| ||||||||||||||||||    
T  19058923 gacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 28273190 - 28273089
Alignment:
Q  106 ctatgaagcacggatacagaca--aca--gacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||||||||||||||| ||||  |||  ||||| |||| || |||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||    
T  28273190 ctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtg 28273091  T
Q  201 tc 202  Q
    ||    
T  28273090 tc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 31672962 - 31672895
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| |||||||| ||||||||||||| ||||||| |||||||||||| |||||||| |||||||||    
T  31672962 gacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcg 31672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 17778549 - 17778659
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacac 243  Q
    |||||| ||||||||||||| ||||||||||   ||||||| ||||||||||||||||||||| |||||    | ||| || ||| ||||||| |||||     
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcgtgtcggtgt----cgcgacacgtgtccgacaccgggacat 17778641  T
Q  244 gcctaatccgaggagtgt 261  Q
    |||||||||||| |||||    
T  17778642 gcctaatccgagaagtgt 17778659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 18337338 - 18337388
Alignment:
Q  153 aataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 21378570 - 21378635
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    ||||| |||||||| ||||||| ||||| |||| ||||||||||||||| ||||||||||||||||    
T  21378570 gacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 30173800 - 30173711
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccga 254  Q
    |||| |||||| |||||||| |||||||||||||||||||||  || || ||||||| |||||| |||| | ||||||||||||| ||||    
T  30173800 aaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccga 30173711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 32434815 - 32434718
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacg-ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    ||||||||||||||||  |||| | ||||| |||||  |||||||||||||||||||||| || |||||||||||| |||| ||||||||||| ||||    
T  32434815 ctatgaagcacggatatggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 5376566 - 5376483
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||||||||  |||||||||| |  |||| ||||||||||||||| ||| ||||||||||||||||| | |||| ||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 44482240 - 44482307
Alignment:
Q  154 ataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||||  |||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||| ||||||||||||| |||| ||||||||||||||| |||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 31015039 - 31015097
Alignment:
Q  140 cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 198  Q
    |||| ||||| ||||||||||||  |||||||||||||||||||| |||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 36878453 - 36878519
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||| | |||||||||||    
T  36878453 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 48450654 - 48450592
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 198  Q
    |||||||| ||||| ||||||||||||| |||| |||||||| |||||| |||||||||||||    
T  48450654 gacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 33202954 - 33203007
Alignment:
Q  206 ttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagt 259  Q
    ||||||||||||||||||||| | |||||||  |||||||||||||||||||||    
T  33202954 ttggtgtcagacacgatacatatccgacaccgtgacacgcctaatccgaggagt 33203007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 398832 - 398784
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  398832 gacacgccgacaccgctaataatttgaaaaaatcacataattcagtgta 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 12443527 - 12443479
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgta 12443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 34371734 - 34371782
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  34371734 aaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtc 34371782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 35702691 - 35702588
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgacac------gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    ||||||||||||||||| |||| | ||||||||||      ||||||||| ||||||||||||| |  ||| |||||| |||||| ||||||||||| ||    
T  35702691 ctatgaagcacggatacggacaccggacacgacactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagt 35702592  T
Q  200 gtcg 203  Q
    ||||    
T  35702591 gtcg 35702588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 41877534 - 41877470
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||  ||||||||||||  |||| |||||||| |||||| ||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 9103632 - 9103698
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||| ||  |||||||||||||||||    
T  9103632 gacacgccgacacagttaataatttgaaaaaatcacataatttagttta-atacaagtgtcggtgtcg 9103698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 43492582 - 43492495
Alignment:
Q  115 acggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| ||||||| | |||||||||||||||||| |||| ||||||||  ||||||| |||||| ||||| |||   |||||||||||    
T  43492582 acggacacagacaccggacacgacacgccgacaccactagtaatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtc 43492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 2896188 - 2896122
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||||||| || |  ||||||||||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 7918278 - 7918208
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||| ||||  |||||||||||||  |||||||||||||||||||| ||| | ||||| |||||||||    
T  7918278 gacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 13436451 - 13436517
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  |||||||||| | ||||||||||||||||||||| ||| | |||| |||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcg 13436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 17408740 - 17408814
Alignment:
Q  193 tgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||| |||||||| |||||||||| || ||| |||||||| || || ||||||| || ||||||||||||    
T  17408740 tgtcggtgttgtgttggtatcagacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgc 17408814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 35919347 - 35919273
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||| |||||||| |||||||||||||||||     ||||||||||||||||| ||| ||||||| |||||||||    
T  35919347 acactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgt 35919273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 15449279 - 15449215
Alignment:
Q  155 taatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||| ||||||    
T  15449279 taatttgaa-aaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg 15449215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 16297265 - 16297228
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16297265 cgacaccaggacacgcctaatccgaggagtgtccgtgc 16297228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 21032248 - 21032329
Alignment:
Q  186 ttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| |||||||||||||| |||||| ||||||| |  ||| ||||| |  || ||||||||||| ||||||||||||||    
T  21032248 ttacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgc 21032329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 5898368 - 5898267
Alignment:
Q  106 ctatgaagcacggatacagaca----acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||| ||||||||||| ||||    |||||||| || ||||||||||  |||||||| |||| |||||||||||||||||||| ||| | | |||||||    
T  5898368 ctatgtagcacggatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtg 5898269  T
Q  201 tc 202  Q
    ||    
T  5898268 tc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 13011283 - 13011223
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgt 195  Q
    |||| ||||||||| ||||||||||||| ||| |||||||||| |||||| ||||||||||    
T  13011283 gacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 14332714 - 14332642
Alignment:
Q  131 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||| ||| |||| |||||||||||||  ||||||||||||| |||||| ||| | || |||||||||    
T  14332714 gacacgacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcg 14332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 21620946 - 21621014
Alignment:
Q  140 cgccgacacaactaataatttgaagaaa-----tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||| |||||||||| ||||||||||||     ||||||||||||||||| ||||||| ||||||||||    
T  21620946 cgccaacacaactaaaaatttgaagaaaaaaaatcacataattcagtgtatttacaagcgtcggtgtcg 21621014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 23738676 - 23738716
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtg 182  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  23738676 ccgacacagctaataatttgaaaaaatcacataattcagtg 23738716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 34298428 - 34298476
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||| ||||||| |||||||||||||  ||||||||||||||||||||    
T  34298428 gacacaccgacaccactaataatttgagaaaatcacataattcagtgta 34298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 1262876 - 1262919
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattca 179  Q
    |||||||||||||| ||||||||||||  |||||||||||||||    
T  1262876 gacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 1864941 - 1864882
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    ||||||||  |||||||||||  |||||||||||||||||||| ||| | ||||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 5898272 - 5898213
Alignment:
Q  208 ggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||| || ||| | ||||| ||||||| ||||||||||||||||| ||||    
T  5898272 ggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgc 5898213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 18471297 - 18471355
Alignment:
Q  143 cgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggt 199  Q
    ||||||| ||||||||||||| |||  |||||||||||||| || ||||||||||||||    
T  18471297 cgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 6427342 - 6427412
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||| ||||  ||||||||||||  ||||||||||||||| |||| ||| | |||| ||||||||||    
T  6427342 gacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 12611977 - 12612043
Alignment:
Q  155 taatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    ||||||||| ||||||||||||| |||||| | | | ||||| || |||||||||||| ||||||||    
T  12611977 taatttgaaaaaatcacataattgagtgtaatcatatgtgtcagtatcgtgttggtgttagacacga 12612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  156 aatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||  ||||||||||||| |||||| ||| |||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 26830641 - 26830699
Alignment:
Q  209 gtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||| | || ||||||| ||| |||||||||||||| |||||||||| ||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgc 26830699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 27471618 - 27471524
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgc 245  Q
    ||||||||||||  ||| |||||||||||||||| ||||| |||| |||||| | | |||||  || |||| || ||| ||||||| ||||||||    
T  27471618 ctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccgacaccgggacacgc 27471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 30359371 - 30359441
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||| ||||| ||| ||||||| |||||||||| ||||||||||||| ||||||  | |||||||||    
T  30359371 acagacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 2218264 - 2218301
Alignment:
Q  169 cacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgt 2218301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 3490457 - 3490396
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||||||||  ||||||||||||  |||  |||| |||||||||| ||||||||||||    
T  3490457 gacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcg 3490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 8010339 - 8010270
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    ||||||||||||| |||| | |||||||||| || ||| |||||||| ||| |||| ||||| |||||||    
T  8010339 ctaataatttgaaaaaattatataattcagtataattataagtgtcgatgttgtgtcggtgtgagacacg 8010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 13997875 - 13997940
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||||||   |||| |||| || |||||||||||||||||||| ||| | ||||||||||    
T  13997875 gacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 15323171 - 15323228
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttgg 209  Q
    |||||||||||| ||||||||||||| |||||| ||  ||||||| || |||||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttgg 15323228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 17831598 - 17831474
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagaca-cgatacatgttcgaca 234  Q
    |||||||||||||  ||||||||||||  ||||||||| |||||||||| | | | |||||   |||||||  ||||| |||| ||| |  ||| |||||    
T  17831598 gacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc---gtcgtgtcagtgtcggacaccgacatgtgtccgaca 17831502  T
Q  235 ccaggacacgcctaatccgaggagtgtc 262  Q
    || ||||||||||||||  |||||||||    
T  17831501 ccgggacacgcctaatcttaggagtgtc 17831474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 21366088 - 21366039
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||| |||| |||||||||| || |||| |||||||||||||||    
T  21366088 cgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 25934603 - 25934739
Alignment:
Q  131 gacacgacacgccgacacaactaataatttgaag-aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtt 229  Q
    |||| |||||||||||||| |||| | |||  || |||||||| ||| ||||||| ||| | |||||||| |||||| |||||| ||||||| || |||     
T  25934603 gacatgacacgccgacacagctaa-attttctagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtc 25934701  T
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     |||||  ||| |||||| |||| ||||||||| ||||    
T  25934702 tgacacggggatacgccttatccaaggagtgtccgtgc 25934739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 29144422 - 29144365
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||||||||| ||||||||||||| |||  | ||||| ||||||| |||||||||||    
T  29144422 acgccgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 42359433 - 42359396
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  42359433 cgacaccgggacacgcctaatccgaggagtgtccgtgc 42359396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 5927392 - 5927340
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||| |||||| |||||| | |||| ||||||||||| ||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 7918197 - 7918161
Alignment:
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgc 7918161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 17754303 - 17754351
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||| |||||||  ||||||||||||| |||| |||||||||||||||    
T  17754303 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 17754351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 19637816 - 19637872
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagt 259  Q
    |||| |||||| |||||||||||| | ||||||| |||| | |||||||||||||||    
T  19637816 gtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagt 19637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 22947806 - 22947842
Alignment:
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgc 22947842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 24334737 - 24334705
Alignment:
Q  171 cataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcg 24334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 40181878 - 40181930
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  |||||||||||||||||||| ||| | || |||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 40285706 - 40285646
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 211  Q
    ||||||||||||  ||||| |||||||||||||||| | | |||||| |||||||| ||||    
T  40285706 ctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcggtg 40285646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 15816196 - 15816065
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||| ||   | ||||||    
T  15816196 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacac 15816097  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||||||| |||||| ||||    
T  15816096 cgggacacgcctaatccgagaagtgtccgtgc 15816065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 22651968 - 22652099
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| | || ||||||||||||||||||||| |||||| ||||||| |  ||| ||||||    
T  22651968 gacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacac 22652067  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||| ||||||||||||||||| ||||    
T  22652068 cgggacacgtctaatccgaggagtgtccgtgc 22652099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 29510371 - 29510240
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| || |||||||||||||||| |||| |||||| |||||||  | ||| ||||||    
T  29510371 gacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacac 29510272  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||| |||||||||||||||||| ||||    
T  29510271 cgggacacacctaatccgaggagtgtccgtgc 29510240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 29447178 - 29447046
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||| ||| |||||| ||||||| |  |||  ||||    
T  29447178 cgacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgaca 29447079  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||| ||||||||| ||||    
T  29447078 ccaggacacgcctaatcctaggagtgtccgtgc 29447046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 36450851 - 36450701
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||     
T  36450851 ctatgaagcacggatacggaca-cggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcg- 36450754  T
Q  205 gttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
              |||||||  | ||| ||||||||||||||||||||||||||||||||||||||    
T  36450753 ----------gacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgc 36450701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 8343307 - 8343439
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||| |||||| | ||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||    ||||| ||||||| || ||| |||||    
T  8343307 cgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgaca 8343406  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || ||||||||||||||||| ||||||||||||    
T  8343407 ccgggacacgcctaatccgaagagtgtctgtgc 8343439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 4673501 - 4673361
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| ||||||||||||||  |||||||||||| |||||| | ||||||||||| |||||||| || ||||| ||||| |||| |||||||  |||    
T  4673501 acagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcat 4673402  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     | ||||||| | ||||||||||||| ||||||||||||||    
T  4673401 atccgacaccggaacacgcctaatccaaggagtgtctgtgc 4673361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 25566841 - 25566910
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 2572124 - 2572016
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||  ||||| ||||||| || ||| ||| |    
T  2572124 cgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgata 2572025  T
Q  235 ccaggacac 243  Q
    || ||||||    
T  2572024 ccgggacac 2572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 41832007 - 41831887
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||||||  |||||||      |||||||||||||| |||||||||| | | |||||     
T  41832007 gacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagt------gtcgtgttggtgtcggacacgatacgtatccgacaa 41831914  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
    ||||||||| ||||| |||||||||||    
T  41831913 caggacacgtctaattcgaggagtgtc 41831887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 13437031 - 13436954
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||||||||||||| ||||||||||||| |||||||||||||||  ||| | ||||||||||||||||||| ||||||    
T  13437031 gacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 40332154 - 40332248
Alignment:
Q  105 actatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||||||||||| |||| | |||||||||||  |||||  | ||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  40332154 actatgaagcacggatacggacaccggacacgacacg--gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 11927150 - 11927022
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    ||||||||||   |||||||||||  |||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||| |  | | | ||| |      
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcga 11927051  T
Q  239 gacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||| ||||||| ||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgc 11927022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 11944658 - 11944782
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacacc 236  Q
    ||||||||||||   |||||||||||  ||||||||||| |||||||| ||| | ||||||||||||||||| ||||| |||||| |  | | |||||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacacc 11944757  T
Q  237 aggacacgcctaatccgaggagtgt 261  Q
      |||||||||||||||| ||||||    
T  11944758 gagacacgcctaatccgatgagtgt 11944782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 31556989 - 31557103
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||| ||           |||||||||||||| |||||| ||||||    
T  31556989 gacacgccgacacagttaataatttgaa-aaatcacataattcagtgtaattacaagtttc-----------ggtgtcagacacgacacatgtccgacac 31557076  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
    ||||||||||||||||| ||| |||||    
T  31557077 caggacacgcctaatccaaggtgtgtc 31557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4948657 - 4948711
Alignment:
Q  149 aactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 8342929 - 8343032
Alignment:
Q  105 actatgaagcacggatacagacaacagacacgacacg----ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||||||||||||| || |||| | ||||||||||     |||||| | ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  8342929 actatgaagcacggacacggacatcggacacgacactgacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 8343028  T
Q  201 tcgt 204  Q
    ||||    
T  8343029 tcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 21465388 - 21465535
Alignment:
Q  118 gatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagac 217  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||||| |||||| |||||||  |||| |||||||||| ||||||||||  ||||| |||    
T  21465388 gatacggacaccggacacgacacg--gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggac 21465485  T
Q  218 acgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| || ||| | ||||  ||| |||||||||  |||||||||| ||||    
T  21465486 acgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgc 21465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 22595950 - 22596053
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac------gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    ||||||||||||||||| |||| | |||||      |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||||||| |||    
T  22595950 ctatgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggt 22596049  T
Q  200 gtcg 203  Q
    ||||    
T  22596050 gtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 11803267 - 11803382
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    ||||||||| |  |||||||||||||||||||| ||| | |||| ||||| ||||||||||  || |||| |||||| ||||||  | ||||| ||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatc 11803366  T
Q  252 cgaggagtgtctgtgc 267  Q
    ||||||||||| ||||    
T  11803367 cgaggagtgtccgtgc 11803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 20873061 - 20873128
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||| |  |||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  20873061 gacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 22197808 - 22197678
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc-gtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| ||||| ||||||||||||| || |||||||||| |||||| ||||||||||| ||||| ||| | ||||| |||| || || ||| ||||||    
T  22197808 acacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtg-tcgtgtcggacatgacacgtgtccgacac 22197710  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |  ||||||||||| |||||||||| ||||    
T  22197709 cggatcacgcctaatctgaggagtgtccgtgc 22197678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 24613513 - 24613579
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  24613513 gacacaccgacacagctaataatttgaa-aaatcacataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 30271358 - 30271288
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||| ||||| ||||||| |||||||||||| ||||||| ||||||||| | |||||||||    
T  30271358 gacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgt 30271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 4298952 - 4298887
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||||  |||||||||||| ||||||||||||| | |||| |||||||||||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 24669416 - 24669492
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| ||||||| |||||   ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  24669416 acagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 29447467 - 29447567
Alignment:
Q  167 atcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtg 266  Q
    ||||||||||| |||||| ||| | |||| |||||||||| |||||||||||||| |  ||| ||||||| ||||| | |||||| |||||||||| |||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtg 29447566  T
Q  267 c 267  Q
    |    
T  29447567 c 29447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 44067508 - 44067639
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac-gatacatgttcgaca 234  Q
    |||||||||||||   |||||||||||  |||| ||||||| ||||||| ||| |||||||| |||||   | ||||| ||||| ||| | ||| |||||    
T  44067508 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg-tgtcggtgtcgtgtcggacactgatgcgtgtccgaca 44067606  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||| ||||||||||| ||||    
T  44067607 ccaggacacgcctaattcgaggagtgtccgtgc 44067639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 5813584 - 5813651
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| || ||||||| || ||||||  |||||||||||||||||    
T  5813584 gacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 5813651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 18170549 - 18170482
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||| |||| |||||| |||||||||||    
T  18170549 gacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 18634117 - 18634050
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||| |||| |||||| |||||||||||    
T  18634117 gacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 30077454 - 30077387
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| || || ||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  30077454 gacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 44462206 - 44462151
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggag 258  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  44462206 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 44469739 - 44469684
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggag 258  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  44469739 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 14134661 - 14134757
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||  |||||||||||||  |||||||||||||||||||| ||| |  ||||||||||    
T  14134661 ctatgaagcacggatacggacacc-gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 18407711 - 18407831
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||| |||||||||  || |||||||||||||||||||| |||||||||||| || ||           ||||||| |||||| ||||||    
T  18407711 gacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcgctgccg-----------gacacgacacatgtccgacac 18407799  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||||||||||  |||||||||| ||||    
T  18407800 taggacacgcctaattggaggagtgtccgtgc 18407831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 13844689 - 13844596
Alignment:
Q  109 tgaagcacggatacagacaacagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||| |||||||||   |||||| ||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| | ||||||||||||    
T  13844689 tgaagcacgaatacagacac--gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 25192414 - 25192350
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    |||||||||||||| ||||||||||||| || | |||||||||||| || ||| |||||||||||    
T  25192414 gacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 28385045 - 28384937
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg-atacatgttcgacaccaggacacgcctaat 250  Q
    ||||||| |||| ||||| |||||||||||||| ||| | ||||||||||| |||  |||||||||||| | ||||||  ||  |||||| |||||||||    
T  28385045 taataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgtacacatgtctgatgccaggatacgcctaat 28384946  T
Q  251 ccgaggagt 259  Q
    || ||||||    
T  28384945 ccaaggagt 28384937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 28745505 - 28745621
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||| || |||||||||||| ||||  ||||| ||||| |||||||| |||||| ||||||| || ||| || ||||  |||| | |||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaat 28745604  T
Q  251 ccgaggagtgtctgtgc 267  Q
     | ||||||||| ||||    
T  28745605 tcaaggagtgtccgtgc 28745621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 4786405 - 4786338
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||| | ||||||||| |  |||||||||||||||||||| ||| | ||||||||||||    
T  4786405 gacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 17468568 - 17468505
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||| ||||||||| | |||||||||||| | ||||| |||||||||| ||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgt 17468505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 24362270 - 24362192
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||||||||||||  ||||||||||||   ||||||||||||||||||| ||| | |||||  |||||||| ||||||    
T  24362270 cgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 26902213 - 26902111
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctg 264  Q
    |||||||||||||||||||| ||| | ||||||||||||| |  ||||| ||||||| || |||  | |||  |||||||||| ||| |||||||||| |    
T  26902213 aaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccg 26902114  T
Q  265 tgc 267  Q
    |||    
T  26902113 tgc 26902111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 16642033 - 16641916
Alignment:
Q  144 gacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggaca 242  Q
    ||||||||||||||||||| ||||| ||||||||| ||||| |||| | |||||||||||      ||||| ||||||| |  |||   ||||| |||||    
T  16642033 gacacaactaataatttga-gaaatacacataatttagtgtcgttatatgtgtcggtgtc------gtgtcggacacgacatgtgtctaacaccgggaca 16641941  T
Q  243 cgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||||||||||||    
T  16641940 cacctaatccgaggagtgtctgtgc 16641916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 24196665 - 24196628
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcaca 172  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24196665 cgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 27067360 - 27067282
Alignment:
Q  141 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||| |||||| ||||||  |||| |||||||||  |||| ||||||||||| ||||||||| |||||| |||||||    
T  27067360 gccgacaccactaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 27067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 12570560 - 12570461
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    |||||||||| |  ||| ||||||||| |||||| ||| | |||||| ||| || | |||||||||||| | || ||| |||||||||||||||||||||    
T  12570560 ctaataatttaagaaaaacacataattaagtgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaat 12570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 31236644 - 31236580
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    |||||||||||||  ||||||||||||  ||||||||||||||| |||| ||| | |||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||  |||||||||| ||||||||| ||| |||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 22943348 - 22943301
Alignment:
Q  215 gacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||| || ||| ||||||| |||||||||||||||||||||||||    
T  22943348 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 24858001 - 24858073
Alignment:
Q  136 gacacgccgacacaactaataatttg---aagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||||  ||||||||||   || ||||||||||||||||||||  ||||||||||| ||||||||    
T  24858001 gacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgta-atacaagtgtcgttgtcgtgt 24858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 34897077 - 34897144
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| ||||||  ||||||||||||  |||||||||||||||||||| ||| | |||||| |||||    
T  34897077 gacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 34897144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 41838190 - 41838131
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||| ||||||| |||||||||| || |||||||||||||||||| |  |||||||||    
T  41838190 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 7658458 - 7658520
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||| |||||||||||||  |||| ||||||||||||||| ||| |  |||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 13436955 - 13436917
Alignment:
Q  229 tcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  13436955 tcgacaccgggacacgcctaatccaaggagtgtctgtgc 13436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 27101507 - 27101553
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtg 182  Q
    |||||||||||||  ||||||||||||| ||||||||||||| ||||    
T  27101507 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtg 27101553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 31514872 - 31514930
Alignment:
Q  144 gacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||||||||||||| ||| ||||||||||||| |||  ||||||||| |||||    
T  31514872 gacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgttggtgt 31514930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 39954347 - 39954277
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    ||||||||||||||  ||||||||||||  ||||||||||||| |||||| ||| | ||| ||||| ||||    
T  39954347 cgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtgccgtg 39954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 7472575 - 7472514
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||| ||||||||||| |||||||||||||| | |||||| ||| | ||||| |||||||    
T  7472575 cgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtgtctgtgtcgt 7472514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 8343038 - 8343079
Alignment:
Q  226 tgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||| ||||||| ||||||||||||||||| ||||||||||||    
T  8343038 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgc 8343079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Original strand, 25566913 - 25566942
Alignment:
Q  238 ggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||||||||||||||||    
T  25566913 ggacacgcctaatccgaggagtgtctgtgc 25566942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 3025558 - 3025610
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||| ||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 9945300 - 9945356
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagt 259  Q
    |||| ||||||||||| ||||||| | ||||||||||| |||||| |||||| ||||    
T  9945300 gtgtcggtgtcagacatgatacatatccgacaccaggagacgccttatccgaagagt 9945356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 17751731 - 17751763
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||| |||||||||||||||||||||||||    
T  17751731 cgacaccgggacacgcctaatccgaggagtgtc 17751763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 17760718 - 17760750
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||| |||||||||||||||||||||||||    
T  17760718 cgacaccgggacacgcctaatccgaggagtgtc 17760750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 24727821 - 24727694
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgac 233  Q
    |||||| | ||||||||||||||||||| |||  | ||||||| ||||||| || |||||||  ||||| ||| ||| ||  ||| || || ||| | |     
T  24727821 gacacgtcaacacaactaataatttgaaaaaaaattacataatgcagtgtaatttcaagtgttagtgtcatgtcggtatcgaacatgacacgtgtccaat 24727722  T
Q  234 accaggacacgcctaatccgaggagtgt 261  Q
    ||||| |||||||||||||||| |||||    
T  24727721 accagaacacgcctaatccgagaagtgt 24727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 81)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 16766689 - 16766820
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| | || ||| ||||||    
T  16766689 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacac 16766788  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||| || |||| ||||    
T  16766789 cgggacacgcctaatccgaagaatgtccgtgc 16766820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 8365586 - 8365463
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||| ||| || ||||||| || ||| ||||||    
T  8365586 gacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacac 8365487  T
Q  236 caggacacgcctaatccgaggagt 259  Q
      ||||||||||||||||||||||    
T  8365486 tgggacacgcctaatccgaggagt 8365463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 9107436 - 9107313
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacacc 236  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||| |    ||| |||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacacc 9107337  T
Q  237 aggacacgcctaatccgaggagtg 260  Q
     |||||| ||||||||||||||||    
T  9107336 gggacacacctaatccgaggagtg 9107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 5970175 - 5970051
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||||| |||||| ||| |||||||||| |||||| ||||||| |||| | |||||     
T  5970175 gacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacat 5970076  T
Q  236 caggacacgcctaatccgaggagtg 260  Q
    | ||||||||| |||||||||||||    
T  5970075 cgggacacgcccaatccgaggagtg 5970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 8713971 - 8714099
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||| |||||||  |||||||||||| ||| ||||||||||||||||| |||||| ||| |||||||||| |||||| ||||||| |||| | |||||    
T  8713971 gacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgaca 8714070  T
Q  235 ccaggacacgcctaatccgaggagtgtct 263  Q
     | ||||||||| ||||||||||||||||    
T  8714071 tcgggacacgcccaatccgaggagtgtct 8714099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 31384923 - 31385042
Alignment:
Q  147 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcc 246  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| | ||||  ||||||| || ||| | ||||| |||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtg-tagtgttggacacgacacgtgtcctacaccgggacacgcc 31385021  T
Q  247 taatccgaggagtgtctgtgc 267  Q
    |||||| ||||||||| ||||    
T  31385022 taatccaaggagtgtccgtgc 31385042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 10770776 - 10770671
Alignment:
Q  106 ctatgaagcacggatacagaca--aca--gacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    ||||||||||||||||| ||||  |||  ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  10770776 ctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 10770677  T
Q  201 tcgtgt 206  Q
    ||||||    
T  10770676 tcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 34595126 - 34595193
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  34595126 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 18367823 - 18367959
Alignment:
Q  131 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttc 230  Q
    ||||||||||||||||||| |||||  ||| |  |||||||| ||| ||||||| ||| | ||||||||||||||| |||||||||||||| ||||||      
T  18367823 gacacgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtct 18367922  T
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||  |||||||||| |||| ||||||||| ||||    
T  18367923 gacacggggacacgccttatccaaggagtgtccgtgc 18367959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 7801222 - 7801156
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  7801222 acacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 16833291 - 16833365
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  16833291 acagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 12696316 - 12696441
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| |||||      ||||| ||||||| || |||  |||||    
T  12696316 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgtgtctgacac 12696409  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||| ||| |||| ||||||||||||||    
T  12696410 cgggacacaccttatccaaggagtgtctgtgc 12696441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 853926 - 853859
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  853926 gacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcg 853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 7977897 - 7977830
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 8777040 - 8776973
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||    
T  8777040 gacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcg 8776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 3398611 - 3398729
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||| ||| |||| ||||||||||||||      ||||||| |||||| ||||||    
T  3398611 gacacgccgacacagctaataatttgaa-aaatcatataattcagtgtaattataagtatcggtgtcgtgttg------gacacgacacatgtccgacac 3398703  T
Q  236 caggacacgcctaatccgaggagtgt 261  Q
    | | ||||| |||||| |||||||||    
T  3398704 cggaacacgtctaatcagaggagtgt 3398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 17841686 - 17841589
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||    
T  17841686 ctatgaagcactgatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcg 17841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 9522898 - 9522999
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||||| |||| |||||| ||  ||| || ||| |||||||  ||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T
Q  251 cc 252  Q
    ||    
T  9522998 cc 9522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 261
Target Start/End: Original strand, 28152062 - 28152204
Alignment:
Q  107 tatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    |||||||||||||||  |||| | ||||| |||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||      
T  28152062 tatgaagcacggatatggaca-cggacactgacacgccgacaaagctaataatttgaa-aaatcacataattcagtgtaattacaagtgtcggtgtcg-- 28152157  T
Q  206 ttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
             ||||||| || ||| ||||||| ||||| ||||||||||||||||||    
T  28152158 ---------gacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgt 28152204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 1681751 - 1681811
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  1681751 acacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 10339193 - 10339061
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgt-agttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||||||||||  | | ||||||||  ||||||||||||||||||| | ||| | ||||| ||| ||||| |||||| ||||||| |||||| |||||    
T  10339193 gacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgaca 10339094  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |  |||||||||||||| |||||||||| ||||    
T  10339093 ctgggacacgcctaatcggaggagtgtccgtgc 10339061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 3209373 - 3209511
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaa------gtgtcggtgtcgtgttggtgtcagacacgatacatgt 228  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| |||||  ||||||      |||||||||||||||  |||||  |||||| ||  ||    
T  3209373 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtcgtgtcagtgtcgaacacgacacgcgt 3209472  T
Q  229 tcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||| |||||||||||||||||||||||| |||||    
T  3209473 ccgacacccggacacgcctaatccgaggagtgtttgtgc 3209511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 426581 - 426514
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||  |||||||||||| ||||||||||||| | |||| ||||||||||||||||||    
T  426581 gacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcg 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 24645479 - 24645593
Alignment:
Q  143 cgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    ||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||           |||||||||||||| || ||| |||||||| |||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtc-----------ggtgtcagacacgacacgtgtccgacaccaagac 24645567  T
Q  242 acgcctaatccgaggagtgtctgtgc 267  Q
    ||| ||||||||| ||||||||||||    
T  24645568 acgtctaatccgaagagtgtctgtgc 24645593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 4877934 - 4878054
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||| ||| || ||||||||||||||||||           ||||||| |||||| |||||    
T  4877934 gacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcg-----------gacacgacacatgtccgaca 4878022  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||||||||||||||||||||||| ||||    
T  4878023 -caggacacgcctaatccgaggagtgtccgtgc 4878054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 7930297 - 7930367
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||| |||||||||| |||||||||||| ||||||||||||| |||| | || ||||||||||||||||||    
T  7930297 gacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgt 7930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 7938108 - 7938174
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||||| ||||||||||||| |||||| |||||| |||||| ||| |||||||||||||    
T  7938108 gacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 9911587 - 9911525
Alignment:
Q  145 acacaactaataatttgaa-gaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 9911525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 31959151 - 31959213
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 198  Q
    ||||||||| |||| ||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  31959151 gacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 32978967 - 32978846
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||||||||||| ||||||||||||| |||  ||||||||| |||||| ||||||||||||||||||           ||||||| |||||| |||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcg-----------gacacgacacatgtccgaca 32978879  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || ||||||| ||||||| ||||||||| ||||    
T  32978878 ccgggacacgtctaatccaaggagtgtccgtgc 32978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 5000693 - 5000568
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| ||||||  ||||||||| ||  ||||||||| ||||||| || ||  |  |||| ||||| ||| |||||||||||||| |||| | ||||||    
T  5000693 gacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatatccgacac 5000594  T
Q  236 caggacacgcctaatccgaggagtgt 261  Q
    ||||||||| ||||||||| ||||||    
T  5000593 caggacacgtctaatccgaagagtgt 5000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 15489798 - 15489733
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||| |||| |||||||||||||||||    
T  15489798 acacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 25038122 - 25038029
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgc 245  Q
    |||||||||||  |||| |||||||| |||||| |||||| ||||||| | ||||||||||| ||||||| || ||| ||||||||| ||||||    
T  25038122 taataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 10294114 - 10294230
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||   |||| |||| |||| |||| ||| | |||||||||||||||||||||| ||||||| |  ||| ||| || |||||||  |||||    
T  10294114 ctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaat 10294213  T
Q  251 ccgaggagtgtctgtgc 267  Q
    | |||||||||||||||    
T  10294214 ctgaggagtgtctgtgc 10294230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 28715302 - 28715401
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||           ||||||| || ||||||||||| |||||||||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacgtgttcgacaccgggacacgcctaat 28715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 6898348 - 6898281
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||| |||||  ||||||||||||| |||| |||||||| |||||| ||||||||||||||||||    
T  6898348 gacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcg 6898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 7248329 - 7248481
Alignment:
Q  107 tatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||||||||||| |||||||| |||         ||||||||| ||| ||||||||||||||||| ||| ||| | |||| || |||||||    
T  7248329 tatgaagcacggatacagacatcagacacggcacc--------actaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgt 7248420  T
Q  207 tggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
     |||||  ||||| | |  ||| ||||||| ||||||| | ||||||||||||||| ||||    
T  7248421 cggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgc 7248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 17302548 - 17302619
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||| |||| |||||||||||  ||||||||    
T  17302548 gacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgt 17302619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 17435162 - 17435306
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||| |||| | ||||| || ||| ||||| | |||||||||| || |||| ||||||||||||||| ||||||||||  ||||  |    
T  17435162 ctatgaagcacggatac-gaca-cggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgtttt 17435259  T
Q  205 gttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    || | |||| ||||||| || ||||||||||  ||||||| ||||||    
T  17435260 gtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 1191763 - 1191706
Alignment:
Q  140 cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  1191763 cgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 26562681 - 26562758
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||||||||||||  |||| |||||||  |||||||||||||||||||| ||| | |||||| |||||||| ||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtc 26562758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 21395375 - 21395292
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    ||||||||| ||||  ||||||||||||  |||| |||||||| |||||| |||||||||||||||||||||  ||||| |||||    
T  21395375 cgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 403915 - 403864
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcg 403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 7265660 - 7265593
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| ||||  ||||||||||||  |||||||||||||||||||| ||| | ||||||||||||    
T  7265660 gacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 8931668 - 8931589
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcaga 216  Q
    ||||||||||||| |||| |||||||  |||| |||||||||||| || ||| | |||||| |||||||| |||||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcggtgtcaga 8931589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 9025546 - 9025491
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 19040344 - 19040411
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||| ||| | ||||| ||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 33001356 - 33001289
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||  ||||||||||||| ||||||||||||| | |||| ||| | ||||||||||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 9027170 - 9027240
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||  ||||||||||||   ||||||||||||| ||||| ||| | |||||||||||||||    
T  9027170 gacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 9195806 - 9195736
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    ||||||||||||  |||| |||||||| |||||| ||| | ||||||||||||||| |||||| |||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacga 9195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 9629375 - 9629501
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||  | ||||||||||  ||||||||||||||| |||| ||| | ||||||||||||   | ||||| ||||| | |  ||| ||||||    
T  9629375 gacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacacaacatgtgtccgacac 9629474  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
       |||||| |||||||||||||||||    
T  9629475 tgagacacgtctaatccgaggagtgtc 9629501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 19044456 - 19044522
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||| |||||||||||||  | |||||||||||||||||  ||| | |||||||||||    
T  19044456 gacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 16488657 - 16488572
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||||||||| |||||  ||| |  |||||||| ||| ||||||| ||| | ||||||||||||||| |||||| |||||||    
T  16488657 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 16488572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 10842524 - 10842572
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtgta 10842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 13364704 - 13364652
Alignment:
Q  215 gacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||  |||||||||||||| ||| ||||| ||||||||||||    
T  13364704 gacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgc 13364652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 17341731 - 17341671
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||| ||| |||||||    
T  17341731 gacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 28862082 - 28862197
Alignment:
Q  105 actatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacat-aattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||||| || |||| ||||||| | ||||||||||    |||||||||||  |||| |||| ||||||||||| | | | |||||||||||    
T  28862082 actatgaagcacggacacggaca-cagacaccggcacgccgacatcgataataatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgtc 28862180  T
Q  203 gtgttggtgtcagacac 219  Q
    ||||||||||| |||||    
T  28862181 gtgttggtgtctgacac 28862197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 34225868 - 34225828
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgta 34225828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 34290144 - 34290063
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    |||| |||||||||||||||||||||    ||||||||||||||||||| ||  | |||||||||||||||  ||||| |||||    
T  34290144 gacatgccgacacaactaataatttgcgagaatcacataattcagtgtaatt--atgtgtcggtgtcgtgtcagtgtccgacac 34290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 4118384 - 4118285
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||| ||||||||||||| | |||| |||||||||| ||| | ||||  ||||| ||||| |||| |||| ||||  |  ||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttgacaataaaacacgcctaatc 4118285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 24115914 - 24115871
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattca 179  Q
    ||||||| ||||||||||||||||| || |||||||||||||||    
T  24115914 gacacgctgacacaactaataatttcaaaaaatcacataattca 24115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 1532247 - 1532360
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  |||| ||||||||||||||| ||| | ||   ||||||||||||||||||||||  | |||||||| ||| | || ||   |||||    
T  1532247 ctaataatttgataaaattacataattcagtgtaattatatgt---ggtgtcgtgttggtgtcagacatcacacatgttctacatcggggcatatctaat 1532343  T
Q  251 ccgaggagtgtctgtgc 267  Q
     ||||||||||| ||||    
T  1532344 tcgaggagtgtccgtgc 1532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 2117068 - 2117137
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||| |||||||  ||||||||||||| ||||||||||||||| || | ||| ||||||| |||||||||    
T  2117068 gacactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtc-gtgtcgtgt 2117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 6349799 - 6349717
Alignment:
Q  141 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgata 223  Q
    ||||||| || |||||||||||| |||| |||||||||| |||| ||||| |||| | || ||||||| ||||  ||||||||    
T  6349799 gccgacataattaataatttgaaaaaattacataattcattgtaattacatgtgttgatgccgtgttgatgtcgaacacgata 6349717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 7151419 - 7151473
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    ||||||||||||| ||||||||||||| |||||| ||| | |||| |||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 13360439 - 13360373
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||| |||||| |||| ||||||||  |||||||||||||||||||| ||| | || ||||||||    
T  13360439 gacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 25010262 - 25010212
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagt 193  Q
    ||||||| ||||||||||||| |||||||||||||||| ||  ||||||||    
T  25010262 cgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 34073399 - 34073337
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||||||||||  ||||| |||||||||||||| ||| | | ||||||||||||| ||||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 1700362 - 1700411
Alignment:
Q  154 ataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||| || |||||||||| ||||||||| ||| ||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcg 1700411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 7027236 - 7027301
Alignment:
Q  139 acgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||  || |||||||||| ||| ||||||||||||||||| ||| | ||||||||||||    
T  7027236 acgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 9658871 - 9658936
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||||||  |||||||||| |  |||||||||||||||||||| ||| |  |||||||||    
T  9658871 gacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 10827617 - 10827560
Alignment:
Q  147 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||||||||||||||||||||||||||   |||||| |||||| | || |||||||    
T  10827617 acaactaataatttgaagaaatcacataacatagtgtaattacaaatatcagtgtcgt 10827560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 17341661 - 17341628
Alignment:
Q  234 accaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||||||||||| |||||    
T  17341661 accaggacacgcctaatccgaggagtgtttgtgc 17341628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 20576665 - 20576612
Alignment:
Q  171 cataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatac 224  Q
    |||||||||||||| ||| |||||| |||||||||| | |||||| ||||||||    
T  20576665 cataattcagtgtaattataagtgttggtgtcgtgtcgatgtcaggcacgatac 20576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 26178666 - 26178625
Alignment:
Q  226 tgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||| |||||||||||||| |||||||||||||||    
T  26178666 tgtttgacaccgggacacgcctaatcggaggagtgtctgtgc 26178625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 27904105 - 27904037
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaat--cacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||| | |||||||||| || |||   |||||||||||||||| |||||| ||||||||||    
T  27904105 gacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||||||||  ||||||||||||||| |||||||| | ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 34385003 - 34384958
Alignment:
Q  175 attcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    |||||||||| ||| | |||||||| ||||||||||||||||||||    
T  34385003 attcagtgtaattatatgtgtcggtttcgtgttggtgtcagacacg 34384958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 9617442 - 9617494
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||||||||  ||||||||||||||| |||| ||| | |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 21924999 - 21924935
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||  ||||||||||||  | |||| ||||||||||||| ||| | ||||||||||||    
T  21924999 acgccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 32511718 - 32511666
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||| |  |||||||||||||||||||| ||| |||||| |||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 241586 - 241717
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||| | ||||||||||||| |||||| |||  ||||||||||||||||||||||| ||||||| || ||| ||||||    
T  241586 gacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacac 241685  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||||||| |||||| ||||    
T  241686 cgggacacgcctaatccgagaagtgtccgtgc 241717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 7677703 - 7677828
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    |||||||| ||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| |||||| ||||||  |||||| ||||||| ||||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggac 7677802  T
Q  242 acgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||| ||| ||||    
T  7677803 acgcctaatccgaggagagtcggtgc 7677828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 39698533 - 39698664
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||| |  | | ||||||    
T  39698533 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacac 39698632  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    |  |||||||||||||||||||||||| ||||    
T  39698633 cgagacacgcctaatccgaggagtgtccgtgc 39698664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 30183546 - 30183672
Alignment:
Q  141 gccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccagga 240  Q
    ||||||||||||||||||||||| | ||||||| |||| || || ||||||||||||||||||||||||| |||||||||| || ||| ||||||  |||    
T  30183546 gccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactggga 30183645  T
Q  241 cacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||| |||| |||||||||||    
T  30183646 cacgcctaattcgagaagtgtctgtgc 30183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 21522742 - 21522873
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||| |||||||||||||| |||||| ||||||| || ||| || |||    
T  21522742 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcac 21522841  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||| | ||||||| ||||    
T  21522842 cgggacacgcctaatccaaagagtgtccgtgc 21522873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 21533308 - 21533439
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||| |||||| |||||||||||||| |||||| ||||||| || ||| || |||    
T  21533308 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcac 21533407  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||| | ||||||| ||||    
T  21533408 cgggacacgcctaatccaaagagtgtccgtgc 21533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 21542022 - 21542153
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||||||||||||||| || | || ||||||||||||||| ||||||||||||||||||||| |||||| ||||||| || ||| ||||||    
T  21542022 gacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacac 21542121  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||| ||||| |||| |||| ||||    
T  21542122 cgggacacgccgaatccaaggaatgtccgtgc 21542153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 19579696 - 19579818
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccag 238  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| | |||||||||||||||||||||  ||||| ||||||| | ||||   ||||| |    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgg 19579795  T
Q  239 gacacgcctaatccgaggagtgt 261  Q
    |||||||||||||||||||||||    
T  19579796 gacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 14674231 - 14674323
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 198  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  14674231 ctatgaagcacggatacagaca-cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 15382469 - 15382592
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgac 233  Q
    |||||||||||||| ||||||||||||| |||  ||| |||||||||| || ||||||||||||||||||     ||||  ||||||| |||||| ||||    
T  15382469 gacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcg-----gtgttggacacgacacatgtccgac 15382563  T
Q  234 accaggacacgcctaatccgaggagtgtc 262  Q
    ||| |||||||||||||||||||||||||    
T  15382564 accgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 6247614 - 6247681
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  6247614 gacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 31084315 - 31084435
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||| ||||      ||||| ||||||| || ||| ||||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtc------gtgtcggacacgacacgtgtccgacac 31084408  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
      ||||| |||||||||||||||||||    
T  31084409 tgggacatgcctaatccgaggagtgtc 31084435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 21191123 - 21191056
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  21191123 gacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 21351972 - 21351889
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac 219  Q
    ||||| |||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||| ||| |||||| |||||    
T  21351972 gacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 33178017 - 33178084
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||    
T  33178017 gacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 37328905 - 37328782
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    |||||||| | ||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||||| |  || ||| ||| |||     
T  37328905 ccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatgc--gtccgataccgggat 37328808  T
Q  242 acgcctaatccgaggagtgtctgtgc 267  Q
    |||| |||||||||||||||| ||||    
T  37328807 acgcttaatccgaggagtgtccgtgc 37328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 6035445 - 6035558
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||||||||||||| |||||| |||||| |||||||||||||  |||||||||||| ||||| | ||||||||||||| ||| |  ||||||||||||    
T  6035445 ctatgaagcacggatatagacaa-agacactgacacgccgacaccgctaataatttga-gaaataatataattcagtgtaattatatttgtcggtgtcgt 6035542  T
Q  205 gttggtgtcagacacg 220  Q
    || |||| ||||||||    
T  6035543 gtcggtgacagacacg 6035558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 10298562 - 10298629
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||||||||||||| || ||||||||| || |||| |||||||||||||||||||    
T  10298562 acacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgt 10298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 36642829 - 36642699
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||||  |||||||||||| || | ||||| || ||||||  || ||||||||||||| |||||||||| ||||||| || ||| |||||     
T  36642829 gacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgaca- 36642731  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||||||||  |||||||||| ||||    
T  36642730 cgggacacgcctaattggaggagtgtcggtgc 36642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 42893352 - 42893418
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| |||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  42893352 gacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 13287465 - 13287396
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||| |||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  13287465 acacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 19552610 - 19552488
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||  || |||||||| |||||||| |||||||||||  |    ||| ||||||    
T  19552610 gacacgccgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcgtgtcggtgtcagaca--agtgttgtccgacac 19552515  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
      |||||| ||||||||||||||||||    
T  19552514 ttggacacacctaatccgaggagtgtc 19552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 21576809 - 21576745
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  21576809 acgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 21576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 30135304 - 30135372
Alignment:
Q  135 cgacacgccgacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| |||| |||||||||||||||||    
T  30135304 cgacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 8420019 - 8420086
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||| | ||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  8420019 gacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 17088284 - 17088398
Alignment:
Q  144 gacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggaca 242  Q
    |||||| ||||||||||||| ||| |||||||||| |||||  |||||||||||  |||||||| |||||| | ||||     ||| ||||||| |||||    
T  17088284 gacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtcactgtcgtgtcggtgtcggtcacg-----tgtccgacaccgggaca 17088378  T
Q  243 cgcctaatccgaggagtgtc 262  Q
    ||||||||||||||||||||    
T  17088379 cgcctaatccgaggagtgtc 17088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 41995454 - 41995546
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |||| ||  ||||||||||| ||| | |||||| |||||||    
T  41995454 acagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatt--aagtgtcggtgccgtatcggtgtcggacacga 41995546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 43001762 - 43001917
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||||||||||||||| |||| | ||||| |||| | ||||||  ||||||||||||| |||| ||||||||||||||| |||||||||| ||||        
T  43001762 ctatgaagcacggatacggaca-cggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg---- 43001856  T
Q  205 gttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
        ||||| ||||||| || |||   ||||| ||||||||||||||||||||||||| ||||    
T  43001857 --atgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgc 43001917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 41633727 - 41633795
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||| |||||||| ||||||||||||| || | ||||||||||||||| |||||| ||||||||||||    
T  41633727 gacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgt 41633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 3966495 - 3966626
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||  ||||||||||||  |||||||| ||||||||||| ||| | |||||||||||||||  ||||| ||||| | |  ||| | |||     
T  3966495 gacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacag 3966594  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||| ||||||||||||||||| ||||    
T  3966595 agggacacgtctaatccgaggagtgtccgtgc 3966626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 7218334 - 7218271
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    |||||| ||||| | |||||||||| || |||||||||||||||||||| ||||||||||||||    
T  7218334 gacacgtcgacagagctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 12641682 - 12641765
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||| || ||||||||||||| ||| || || || ||||| |||||||||||||||||||||| | || ||||||||||    
T  12641682 taataatttaaaaaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaacacgtgttcgacac 12641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 24906368 - 24906305
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    |||||||| |||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  24906368 gacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 30098334 - 30098449
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||  ||||||||||||||| |||| ||| |  ||||||| ||| ||  ||||| ||||||| || |||  ||||||||||||| |||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatc 30098433  T
Q  252 cgaggagtgtctgtgc 267  Q
    |||||| |||| ||||    
T  30098434 cgaggaatgtccgtgc 30098449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 4105249 - 4105310
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgt 195  Q
    |||||||||||| ||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  4105249 gacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 40131624 - 40131698
Alignment:
Q  147 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    ||||||||||||||||| ||||||||||||||||| || ||| || | |||||||||| | | ||||||||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacga 40131698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 15883982 - 15884047
Alignment:
Q  139 acgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||| | |||||||| || ||| ||||||||||||||||| ||||||||||||||||||    
T  15883982 acgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 15884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 5894903 - 5894830
Alignment:
Q  131 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||  |||||||||||||||||||| |||||| |||||| | | ||  ||||||||||||||||||||    
T  5894903 gacacgacacg--gacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgt 5894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 6401489 - 6401621
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||||||||||||||||||   ||| |  |||||||| ||| ||||||| ||| | |||||||||||||||  ||||| ||||||| || |||  ||||    
T  6401489 cgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgaca 6401588  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |  ||| |||||| |||| ||||||||| ||||    
T  6401589 cggggatacgccttatccaaggagtgtccgtgc 6401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 15405114 - 15405062
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    |||||||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  15405114 gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 26312822 - 26312881
Alignment:
Q  208 ggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| |||||||||| |||  ||||||||||||| ||||||||||||||||| |||||    
T  26312822 ggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgtatgtgc 26312881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 28588741 - 28588674
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||| ||| | ||||||||||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 12199951 - 12199997
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 211  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||    
T  12199951 aaatcacataattcagtacaattacaagtgtcggtgtcgtgttggtg 12199997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 17177087 - 17177025
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    ||||| ||||| ||||||||||||| |||||| | |||||| |||| ||||||||||||||||    
T  17177087 acgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 27932222 - 27932347
Alignment:
Q  131 gacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttc 230  Q
    |||||| |||||||||||  ||||||||||||  |||| ||||||||||||||| |||||| | | |||||||           ||||||| || |||      
T  27932222 gacacgccacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaaatcttggtgtcg-----------gacacgacacgtgtcg 27932310  T
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||| |||||||||| |||||    
T  27932311 gacaccaggacacgcctaattcgaggagtgtttgtgc 27932347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 2419865 - 2419979
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagaca-cgatacatgttcgacaccaggacacgcctaat 250  Q
    |||||||||||  |||| ||| ||||||||||| |  || ||||| ||| ||||||||||||||||| |||| | ||| |||| || |||||| ||||||    
T  2419865 taataatttgagaaaattacacaattcagtgtaat--catgtgtcagtgccgtgttggtgtcagacaccgatgcgtgtccgaccccgggacacacctaat 2419962  T
Q  251 ccgaggagtgtctgtgc 267  Q
    |||| ||||||| ||||    
T  2419963 ccgatgagtgtccgtgc 2419979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 21814253 - 21814338
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||||||||||| |||||  ||| |  |||||||| ||| ||||||| ||| | ||||||||||||||| |||||| |||||||    
T  21814253 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 21814338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 27144446 - 27144503
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||| |||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  27144446 acagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgta 27144503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 32767004 - 32766879
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggac 241  Q
    |||||||  ||||||||||||  ||||| || |||||| |||| ||| | ||||  ||||||||| ||||||  | |||| || ||| |||||||||||     
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggat 32766905  T
Q  242 acgcctaatccgaggagtgtctgtgc 267  Q
    ||| |||||| |||||||||| ||||    
T  32766904 acgtctaatctgaggagtgtccgtgc 32766879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 38464364 - 38464320
Alignment:
Q  223 acatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  38464364 acatgtccgacaccgggacacacctaatccgaggagtgtctgtgc 38464320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 43564875 - 43564940
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| |  |||||||| | ||||||||||||| |||||| ||| ||||||||||||||    
T  43564875 gacacgccgacacatc--ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcg 43564940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 2436878 - 2436984
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgaca------cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    ||||||||||||||||| |||| | |||||||||      |||||||||  ||||||||||| | ||||||||||||||  |||  ||| | ||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggt 2436977  T
Q  200 gtcgtgt 206  Q
    |||||||    
T  2436978 gtcgtgt 2436984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 6471941 - 6471886
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||||||||  |||||||||||||||||||| ||| | |||| ||||||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 11685931 - 11686061
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||  ||||||||||||  || || ||||||| |||||| ||| | ||||||||||||| | |||||| ||||||| || ||| | | ||    
T  11685931 gacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtccaaaac 11686029  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    || | |||| |||||| |||||||||| ||||    
T  11686030 caaggcacggctaatcggaggagtgtccgtgc 11686061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 22611804 - 22611761
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattca 179  Q
    |||||||||||||  ||||||||||||| |||||||||||||||    
T  22611804 gacacgccgacactcctaataatttgaaaaaatcacataattca 22611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 36838550 - 36838620
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtg-ttggtgtcagacacg 220  Q
    ||||||||||||  |||| |||||||| |||||| ||| | |||||||||||||| |||||||| ||||||    
T  36838550 ctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtttggtgtccgacacg 36838620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 42893413 - 42893467
Alignment:
Q  208 ggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    |||||||||||| | || ||| |||||||||||||||||||||  ||||||||||    
T  42893413 ggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtc 42893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 9449429 - 9449509
Alignment:
Q  104 aactatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||| |||| |||| | ||||| | ||||||||||| | |||||||||||  ||||||||||||||| ||||    
T  9449429 aactatgaagcacgaataccgaca-cggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgta 9449509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 14574117 - 14574068
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||| | ||||||||||| ||||| | |||||||||||||    
T  14574117 cgacacgccgacacgagtaataatttgatgaaatgatataattcagtgta 14574068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 21194131 - 21194070
Alignment:
Q  206 ttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||  ||||||| ||||||  |||||| || |||||||||||||||||||||| ||||    
T  21194131 ttggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgc 21194070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 22423871 - 22423802
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||| |||||||||||||  ||||||||||||||| | || ||| |  |||||||||||||| ||||||    
T  22423871 gacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtc 22423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 35017028 - 35017077
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||| || |||||||||||||  ||||||||||||| ||||||    
T  35017028 cgacacgccgaaaccactaataatttgagaaaatcacataatttagtgta 35017077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 38464432 - 38464371
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||| ||||||||||||||||||||||  ||||||||| ||||| || | ||| |||||||    
T  38464432 cgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattataagtgtc 38464371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 6326364 - 6326304
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    ||||||||||||   ||| ||||||||  |||| ||||||||||||||| |||||||||||    
T  6326364 gacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 6770543 - 6770583
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  6770543 gacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 12159951 - 12160007
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggt 199  Q
    |||||||||||||||||| || ||| ||||||||| | |||| |||||| |||||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 17123108 - 17123159
Alignment:
Q  215 gacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||| |||||| ||||||  ||||||||||||||||||||||||| ||||    
T  17123108 gacacgaaacatgtccgacacg-ggacacgcctaatccgaggagtgtccgtgc 17123159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 22013406 - 22013454
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    |||||||||||||| ||||||||||| | |||| |||||||| ||||||    
T  22013406 gacacgccgacacagctaataatttggaaaaattacataatttagtgta 22013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 30502440 - 30502388
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 30542783 - 30542731
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||  ||||||| |||||||||||| ||| | ||||||||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 24613769 - 24613637
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||| ||| |||||||||||||| || |||  ||||    
T  24613769 cgacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgaca 24613670  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||| ||||||| ||||||||| ||||    
T  24613669 ccaggacacgtctaatcctaggagtgtccgtgc 24613637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 47263978 - 47264109
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| ||||| | ||||||||||| | |||||||||||||| ||||| |||||| ||||| |||| ||||||||||||| |||| ||||||  |||||    
T  47263978 gacacgtcgacatagctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacac 47264077  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||||| ||| ||||||||    
T  47264078 caggacacgcctaatccgaagagcgtctgtgc 47264109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 19482651 - 19482785
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||| |||||||||| ||| |  ||||||| || |    
T  19482651 acagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgt 19482750  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    || ||||||  |||||| |||||||||||||||||    
T  19482751 gtccgacactgggacacacctaatccgaggagtgt 19482785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 128 - 267
Target Start/End: Complemental strand, 3947842 - 3947708
Alignment:
Q  128 acagacacg-acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 226  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||| |||||      ||||| ||||||| || |    
T  3947842 acagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgt 3947749  T
Q  227 gttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || |||||||||||||| |||||||||||||||||| ||||    
T  3947748 gtccgacaccaggacacacctaatccgaggagtgtccgtgc 3947708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 267
Target Start/End: Complemental strand, 30982930 - 30982814
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||| ||||||  |||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||| || ||| ||||||| |||||||||||||    
T  30982930 ctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaat 30982831  T
Q  251 ccgaggagtgtctgtgc 267  Q
    || | ||||||| ||||    
T  30982830 ccaaagagtgtccgtgc 30982814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 23293053 - 23292933
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||           ||||||| || ||| ||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg-----------gacacgacacgtgtccgacac 23292965  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||||||||||| ||||    
T  23292964 cgggacacgcctaatccgaggagtgtccgtgc 23292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 12895211 - 12895113
Alignment:
Q  107 tatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||| ||||| |||| | ||||||||||||||| ||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  12895211 tatgaagcacagatacggaca-cggacacgacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgt 12895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 22234958 - 22234832
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||||||||||  |||| |||||||| ||| ||||||||||||||||| ||  | ||||||||||||||| |||||| ||||||| || ||| |||||    
T  22234958 gacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgaca 22234859  T
Q  235 ccaggacacgcctaatccgaggagtgt 261  Q
    |||||||||  |||||||||| |||||    
T  22234858 ccaggacacagctaatccgagaagtgt 22234832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 54580111 - 54580023
Alignment:
Q  114 cacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| | ||||||  |||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  54580111 cacggatacagacaccggacacgg-acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 16073387 - 16073501
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||||           |||||||||||||| ||||||    
T  16073387 gacacgccaacacaagtaataatttgaa-aaatcgcataattcagtgtaattacaagtgtcggtgtcg-----------gacacgatacatgtccgacac 16073474  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
     | ||||||||||||||||||||||||    
T  16073475 taagacacgcctaatccgaggagtgtc 16073501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 4383360 - 4383444
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||| ||||||| ||||||    
T  4383360 gacacgtcgatacaactaataatttgaa-aaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacga 4383444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 27706244 - 27706123
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| |||||||| ||||||||| || ||||||||||||| |||||| ||||||||||  ||||||||||  |||| ||||||| || | | ||| ||    
T  27706244 gacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgatac 27706145  T
Q  236 caggacacgcctaatccgagga 257  Q
    | |||||||||||||| |||||    
T  27706144 cgggacacgcctaatctgagga 27706123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 21945486 - 21945562
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||| |||| ||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  21945486 acagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 847958 - 848069
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  |||| |||||||||| | || ||||||||||||||||| |||||||||| ||||||| || |||   ||||| |||||| ||||||    
T  847958 ctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaat 848057  T
Q  251 ccgaggagtgtc 262  Q
    || |||||||||    
T  848058 ccaaggagtgtc 848069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 12797404 - 12797338
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  12797404 gacacgccggcaaaactaataatttgaa-aaatcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 30298910 - 30299008
Alignment:
Q  108 atgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    ||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  30298910 atgaagcacagatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 30327778 - 30327876
Alignment:
Q  108 atgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtg 205  Q
    ||||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  30327778 atgaagcacagatacggaca-cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 11596445 - 11596349
Alignment:
Q  111 aagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||| || || |||| ||||||| || ||||| ||| | ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  11596445 aagcacagacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 11596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 24543942 - 24544038
Alignment:
Q  106 ctatgaagcacggatacagacaacagacac-gacacgccgacacaactaataatttgaagaaat-cacataattcagtgtagttacaagtgtcggtg 200  Q
    |||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||| || |||| ||| |||| || |||| |||||||||||||||    
T  24543942 ctatgaagcatggatacggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcggtg 24544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 30838217 - 30838333
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  |||| | |||||| |||||| ||| |||| ||||||||||||  ||||| ||| ||| || ||| |||||||| |||||||||||     
T  30838217 ctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaac 30838316  T
Q  251 ccgaggagtgtctgtgc 267  Q
    |||||||||||| ||||    
T  30838317 ccgaggagtgtccgtgc 30838333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 49431017 - 49431085
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcg 49431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 715674 - 715552
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| |||||| |||         |||||| |||||| ||||||    
T  715674 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacac 715584  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||||||||||||||||||||| ||||    
T  715583 agggacacgcctaatccgaggagtgtccgtgc 715552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 753000 - 752878
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| |||||| |||         |||||| |||||| ||||||    
T  753000 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacac 752910  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||||||||||||||||||||| ||||    
T  752909 agggacacgcctaatccgaggagtgtccgtgc 752878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 12895341 - 12895274
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| |||||||||||| |||||||||||||  ||||| ||| ||||||||||||||    
T  12895341 gacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 28084513 - 28084636
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    |||||||||||||| |||| |||||||| ||| |||||||||||| |||| ||||||||||| ||||||||| |||    ||||||     ||| |||||    
T  28084513 gacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggt----gacacg-----tgtccgaca 28084603  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |  ||||||||||||||||||||||||| ||||    
T  28084604 ctgggacacgcctaatccgaggagtgtccgtgc 28084636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 36635316 - 36635442
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||| |||| |||||||||||||  |||||||||||||||||||| ||| | ||||     ||||||  ||||||||||||| ||  ||  |||||    
T  36635316 gacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt-----tcgtgtgagtgtcagacacgacacgcgtcagacac 36635410  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | ||||||||||||||||| ||||||| ||||    
T  36635411 cgggacacgcctaatccgaagagtgtccgtgc 36635442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 40481629 - 40481687
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40481629 gacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 29205451 - 29205501
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 35158052 - 35157986
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| |||||||||||||    
T  35158052 gacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 28964300 - 28964200
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||           ||||||| |||| | ||||||  |||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcg-----------gacacgacacatatccgacactgggacacgcctaat 28964212  T
Q  251 ccgaggagtgtc 262  Q
    ||||||||||||    
T  28964211 ccgaggagtgtc 28964200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 6485677 - 6485613
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgt 201  Q
    |||||| |||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  6485677 acacgcagacaaaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 34306867 - 34306804
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||||||||||||| |||||| |||||  |||||| ||||||||||||||||||    
T  34306867 acgccgacacaactaataatttgaa-aaatcagataatgtagtgtaattacaagtgtcggtgtcg 34306804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 38847080 - 38847012
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||| |||||||| ||||||||||||| |||||| || |||||||||| ||||||||||| ||||||    
T  38847080 cgacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcg 38847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 42640518 - 42640588
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| || |||||||||| |||   ||||||||||||||||| ||||||||||||||||||    
T  42640518 gacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 2362042 - 2361975
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||| |||||||| ||||||||||||| |||| |||||||| |||||| ||| ||||||||||||||    
T  2362042 gacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 4157150 - 4157208
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  4157150 gacacaactaataatttgaa-aaatcacataatttagtgcaattacaagtgtcggtgtcg 4157208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 50280873 - 50280945
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattca--gtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||||| ||||||||||||| || |||||||||| |  ||||| ||||||||| |||||||||||    
T  50280873 gacacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgtgt 50280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 51701258 - 51701327
Alignment:
Q  144 gacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    |||||| ||||||||||||| |||| |||||||| |||||| ||||||||||  ||||||||| ||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtc 51701327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 5225624 - 5225565
Alignment:
Q  192 gtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    |||||||||||||||||||||| |||||||||||| |  ||| || ||||||||||||||    
T  5225624 gtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatc 5225565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 12708138 - 12708209
Alignment:
Q  136 gacacgccgacacaactaataatttg-aagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    ||||||| |||||||||||||||||  || |||| | ||||||||||||| |||||||||||| ||||||||    
T  12708138 gacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgt 12708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 32273608 - 32273549
Alignment:
Q  121 acagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcag 180  Q
    ||||||| | |||| |||||||| ||||||||||||||||||| |||| |||||||||||    
T  32273608 acagacaccggacatgacacgccaacacaactaataatttgaaaaaataacataattcag 32273549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 40179642 - 40179595
Alignment:
Q  208 ggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgag 255  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  40179642 ggtgtcggacacgacacatgttcgacaccatgacacgcctaatccgag 40179595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 15029757 - 15029875
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||| |||||  ||||||||||||| | |||||||||||||||||| ||| | |||| ||||||| || || |||||||| || ||     ||||||    
T  15029757 gacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg-gtcggcgtcagacatgacac----ccgacac 15029851  T
Q  236 caggacacgcctaatccgaggagt 259  Q
    || |||| ||||||||||||||||    
T  15029852 caagacatgcctaatccgaggagt 15029875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 16303333 - 16303263
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| |  ||||| |||||| |||| | |||||| |||||| |||||||||||||||||||||    
T  16303333 gacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 8423779 - 8423718
Alignment:
Q  142 ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||  ||||||||||||  |||||||||||||||||||| ||| || |||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 19312356 - 19312453
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||||||| |||||||||| ||| |||| |||||||||||| | |||| || |||| || ||| |||||||  |||||| |||||| ||| ||||||    
T  19312356 aaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtc 19312453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 40742586 - 40742667
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    |||||||||| | |||||||||||  |||||| |||||  |||||| ||| | |||||| |||||||| |||||||||||||    
T  40742586 acgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacg 40742667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 4672149 - 4672085
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||| |||||||||||   |||| |||||||||||||||| || | ||||||||||||    
T  4672149 acgccgacacagctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcg 4672085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 14465133 - 14465012
Alignment:
Q  145 acacaactaataatttgaagaaatcacataattcagtgtagttaca-----agtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccagg 239  Q
    ||||| ||||||||||||| ||||||||||||||| |||| |||||     |||||| ||| |||||      ||||||||| || ||||||||||  ||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattacattacaagtgtcagtgccgtgt------cagacacgacacgtgttcgacactggg 14465040  T
Q  240 acacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| |||||| |||||||||| ||||    
T  14465039 acacgtctaatctgaggagtgtccgtgc 14465012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 15724609 - 15724498
Alignment:
Q  144 gacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggaca 242  Q
    |||||||||||||||||||| ||| ||| |||||||||  || |||     ||||||||||||| |||||| ||||| | || |||  |||||||  |||    
T  15724609 gacacaactaataatttgaaaaaaatcatataattcagcataatta-----gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaaca 15724515  T
Q  243 cgcctaatccgaggagt 259  Q
    |||||||||||||||||    
T  15724514 cgcctaatccgaggagt 15724498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 17425390 - 17425354
Alignment:
Q  231 gacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17425390 gacacaaggacacgcctaatccgaggagtgtctgtgc 17425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 31243599 - 31243484
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg-tgttggtgtcagacac-gatacatgttcgacaccaggacacgcctaa 249  Q
    |||||||||||  |||| ||||||||||||||| | | | |||||  ||||| |||||||||| ||||| ||| | |||||||||||||||||| |||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgtca-tgtcggtgttggtgtcggacaccgatgcgtgttcgacaccaggacacacctaa 31243501  T
Q  250 tccgaggagtgtctgtg 266  Q
    |  ||||||||| ||||    
T  31243500 tatgaggagtgtttgtg 31243484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 5414239 - 5414108
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||| |||||  ||| |  |||||||| ||| ||||||| ||| | || ||||||||||||  ||||| ||||||| || |||  |||||    
T  5414239 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacac 5414140  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      |||||| ||| |||| ||||||||| ||||    
T  5414139 agggacacaccttatccaaggagtgtccgtgc 5414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 11651201 - 11651142
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||| ||||||| |||||||||| || |||||||||||||||||| |  |||||||||    
T  11651201 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 21873421 - 21873309
Alignment:
Q  153 aataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatcc 252  Q
    ||||||||||  |||||||||||||||||| | ||  | ||| |||| |||||||||| || |||  || || ||| ||||||| ||||||| |||||||    
T  21873421 aataatttgataaaatcacataattcagtgaaatt--atgtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatcc 21873324  T
Q  253 gaggagtgtctgtgc 267  Q
     |||||||| |||||    
T  21873323 aaggagtgtttgtgc 21873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 21929282 - 21929170
Alignment:
Q  153 aataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatcc 252  Q
    ||||||||||  |||||||||||||||||| | ||  | ||| |||| |||||||||| || |||  || || ||| ||||||| ||||||| |||||||    
T  21929282 aataatttgataaaatcacataattcagtgaaatt--atgtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatcc 21929185  T
Q  253 gaggagtgtctgtgc 267  Q
     |||||||| |||||    
T  21929184 aaggagtgtttgtgc 21929170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 6879503 - 6879465
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  6879503 aaatcacataattaagtgtaattacaagtgtcggtgtcg 6879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 29205528 - 29205574
Alignment:
Q  215 gacacgatacatgttcgacaccaggacacgcctaatccgaggagtgt 261  Q
    ||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  29205528 gacacgacacatgtccgacactgggacacgcctaatccgaggagtgt 29205574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 37496725 - 37496807
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcct 247  Q
    |||| |||||||||| |||| | |||||||||||||| |||| | || | ||||||| ||||||  |||||| ||||||||||    
T  37496725 aaatgacataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacacgcct 37496807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 38148777 - 38148707
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 221  Q
    |||||| |||||  |||||||||||||||||||| ||  || ||||| ||||||||||||||  |||||||    
T  38148777 ctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacga 38148707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcgg 198  Q
    |||||||||||||  |||||| |||||  |||||||||||||||||||| ||| | |||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 16184874 - 16184943
Alignment:
Q  198 gtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||| ||||||  | ||||| | ||| ||||||  |||||||||||||||||||||||| |||||    
T  16184874 gtgtcgtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgc 16184943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 17876241 - 17876278
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  17876241 cgacaccaggacacacctaatccaaggagtgtctgtgc 17876278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 18513219 - 18513182
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  18513219 cgacaccaggacacgcctaatctgaggagtgtccgtgc 18513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 22440601 - 22440564
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  22440601 cgacactaggacacgcctaatccgaggagtgtccgtgc 22440564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 31800546 - 31800477
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    |||||| |||||||| |||||||||| || |||| | |||||| | |||| |||||||||||||| ||||    
T  31800546 cgacacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 4157484 - 4157544
Alignment:
Q  203 gtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtct 263  Q
    |||| |||||| ||||||| |||||| |||||||  || ||||||||| ||||||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtct 4157544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 28000779 - 28000743
Alignment:
Q  166 aatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  28000779 aatcatataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 32910638 - 32910670
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtc 262  Q
    |||||||| ||||||||||||||||||||||||    
T  32910638 cgacaccatgacacgcctaatccgaggagtgtc 32910670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 37203271 - 37203315
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    ||||||||||||| |||| |||||||| |||||| ||||||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 44132682 - 44132634
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtc 213  Q
    ||||||| ||||||||| || ||| | ||||||||||||||||||||||    
T  44132682 aaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtc 44132634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 3900 - 3790
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatc 251  Q
    ||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||| ||||| |  |||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatc 3801  T
Q  252 cgaggagtgtc 262  Q
    |||||||||||    
T  3800 cgaggagtgtc 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 263424 - 263313
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaat 250  Q
    ||||||||||||  ||| |||||||||||||||| ||| ||||||| ||||||||| |||||||||||||| || ||||||| |||| ||||||||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaat 263325  T
Q  251 ccgaggagtgtc 262  Q
    ||||||||||||    
T  263324 ccgaggagtgtc 263313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 8702 - 8571
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| ||||||||||||||||||||||| | |||||||||||| || || |||||| |||||||||||||| ||| || |||||||||| ||| ||||||    
T  8702 gacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacac 8603  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      | ||||||||||| ||||||||||| ||||    
T  8602 tggtacacgcctaattcgaggagtgtccgtgc 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 71679 - 71848
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgacac------gccgacacaactaataatttgaagaaa--tcacataattcagtgtagttacaagtgtcg 197  Q
    ||||||||||||||||| |||| | ||||||||||      ||||||||| ||||||||||||| |||  ||||| ||||||||||| |||| ||||||     
T  71679 ctatgaagcacggatacggacatcggacacgacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtca 71778  T
Q  198 gtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||| |||||| ||||| | || ||| ||||||| ||||||| ||||||||||||||||| ||||    
T  71779 gtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgc 71848  T

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Target: scaffold0036 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 9814 - 9683
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||| | |||||||||||||  ||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||| || |||  ||||     
T  9814 gacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacat 9715  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||  |||||||||||||||| ||||    
T  9714 cgggacacgtataatccgaggagtgtccgtgc 9683  T

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Target: scaffold0086 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 2949 - 3051
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctg 264  Q
    ||||||||||||| |||||| |||||||| || ||||||||| ||| |||||||||| || ||||||||||| | ||||||||||||||||||||||| |    
T  2949 aaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccg 3048  T
Q  265 tgc 267  Q
    |||    
T  3049 tgc 3051  T

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Target: scaffold0004 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 92799 - 92934
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgtt----ggtgtcagacacgatacatgttcg 231  Q
    |||||||||||||  ||||||||||||  |||| ||||||||||||||| ||||||||||| || | |||||    |||||| ||||||| ||||||  |    
T  92799 gacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgacacatgtcgg 92898  T
Q  232 acaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  92899 acacctggacacgcctaatccgaggagtgtccgtgc 92934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 123617 - 123686
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||| ||||| |||||||||| || |||   ||||||||||||||||| |||||||||||||||||    
T  123617 gacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 83172 - 83220
Alignment:
Q  156 aatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgt 204  Q
    ||||| || |||| ||||||||||||||| |||||| ||||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcgt 83220  T

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Target: scaffold0223 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 20164 - 20239
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtg 211  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  20164 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 13392 - 13518
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| |||||||||     |||||| ||||||| ||  ||  |||||    
T  13392 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc-----ggtgtcggacacgacacgcgtctgacac 13486  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||| |||||||| ||||||||| ||||    
T  13487 taggacacacctaatccaaggagtgtccgtgc 13518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 21935 - 21809
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| |||||||||     |||||| ||||||| ||  ||  |||||    
T  21935 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc-----ggtgtcggacacgacacgcgtctgacac 21841  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
     ||||||| |||||||| ||||||||| ||||    
T  21840 taggacacacctaatccaaggagtgtccgtgc 21809  T

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Target: scaffold0361 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtg 194  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 17815 - 17750
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  17815 acacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

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Target: scaffold0103 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 51803 - 51862
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  51803 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 53172 - 53303
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||||||| ||  | ||||||||||  |||||||||||||||||||| ||| ||||||||||| ||||| |||||| |||| || || ||| ||||||    
T  53172 gacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacac 53271  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
    | |||||||  |||||| || |||||| ||||    
T  53272 cgggacacgtttaatccaagaagtgtccgtgc 53303  T

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Target: scaffold0027 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 46674 - 46741
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  46674 gacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

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Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 178886 - 178819
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatca-cataattcagtgtagttacaagtgtcggtgtc 202  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||    
T  178886 gacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 192316 - 192256
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtc 196  Q
    |||||||||||||   |||||||||||  |||| ||||||||| ||||| |||||||||||    
T  192316 gacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 526 - 462
Alignment:
Q  139 acgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  526 acgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 4950 - 4828
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||| |||||||| |||||||||| || ||| ||||||||||||||||| |||||||||| |||||| |||         |||||| |||||| ||||||    
T  4950 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacac 4860  T
Q  236 caggacacgcctaatccgaggagtgtctgtgc 267  Q
      ||||||||||||||||||||||||| ||||    
T  4859 agggacacgcctaatccgaggagtgtccgtgc 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 19568 - 19626
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  19568 gacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 8002 - 8068
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcg 8068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 8658 - 8784
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    |||||| ||||||  ||||||||||    |||||||||| |||||| || ||| |||||||||||||||||   ||||||||  ||||| ||| ||| ||    
T  8658 gacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgtctatgtcagacgtgatacgtgtccgatac 8757  T
Q  236 caggacacgcctaatccgaggagtgtc 262  Q
     | ||||||||| ||||||| ||||||    
T  8758 taagacacgccttatccgagaagtgtc 8784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 8790 - 8857
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    |||||||||||||| ||||||||||||| |||||| || ||| |||||| ||||||||||||||||||    
T  8790 gacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcg 8857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 7403 - 7319
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgt 195  Q
    |||||||||||||||||||||     ||  |||||||||||||||||||||||||| | ||||||||||||| |||||| ||| ||||||    
T  7403 ctatgaagcacggatacagac-----accggacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 33464 - 33375
Alignment:
Q  106 ctatgaagcacggatacagacaacagacacgaca----cgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaa 191  Q
    ||||||||||||||||  |||| | |||||||||    |||||||||| ||||||||||||| |||| ||||||||||||||| ||||||    
T  33464 ctatgaagcacggataaggacaccggacacgacagacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 130474 - 130538
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 200  Q
    |||| |||||||||  ||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  130474 gacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 23403 - 23482
Alignment:
Q  128 acagacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||| ||||||||||||||  |||||| |  || |||||||||||||||||||| ||| |||||||||||||||||    
T  23403 acagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 23482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 23532 - 23634
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctg 264  Q
    |||||||||||||||||||| ||| ||||||| ||||||| | |||||| |||||||||  ||| ||| ||  |||||||| |||||| || ||||| ||    
T  23532 aaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttg 23631  T
Q  265 tgc 267  Q
    |||    
T  23632 tgc 23634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 23777 - 23832
Alignment:
Q  152 taataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 267
Target Start/End: Complemental strand, 44630 - 44461
Alignment:
Q  104 aactatgaagcacggatacagacaacagacacgacacg------ccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||||||||| ||||||||||| ||||||||||| |      | |||||  |||| |||||||  |||||||||||||||||||| ||| | ||||||    
T  44630 aactatgaagcatggatacagacaccagacacgacagggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T
Q  198 gtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    || |||||| |||||  ||||| | || ||| ||||||  ||||| |  ||||| ||| |||||||||||    
T  44530 gtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgc 44461  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 70277 - 70384
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggaca 242  Q
    |||||||  |||||||||||| |||| ||||||||||||||| ||| ||||||||||||||           ||||||| || ||| |||||||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcg-----------gacacgacacgtgtccgacaccaggaca 70365  T
Q  243 cgcctaatccgaggagtgt 261  Q
     ||||||||||| ||||||    
T  70366 tgcctaatccgatgagtgt 70384  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 225335 - 225204
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacac-gatacatgttcgaca 234  Q
    ||||||||||||||  |||||||||||  |||| ||||||| || |||| ||| ||||||||   | |||| | |||| ||||| ||  | |||||||||    
T  225335 gacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtcg-tgtcggacactgacgcgtgttcgaca 225237  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    |||||||||||||||| ||||||||||| ||||    
T  225236 ccaggacacgcctaattcgaggagtgtccgtgc 225204  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  137 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||| |||||||  ||||||||||||  |||||||||||||| ||||| ||| | |||||||||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

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Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 137801 - 137872
Alignment:
Q  165 aaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacacc 236  Q
    |||||||| ||||||||||||| | | |||| ||||||||||  ||||| |||||| ||||||| |||||||    
T  137801 aaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggacacggtacatgtccgacacc 137872  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 188475 - 188512
Alignment:
Q  230 cgacaccaggacacgcctaatccgaggagtgtctgtgc 267  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  188475 cgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 7092 - 7032
Alignment:
Q  143 cgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||| ||||||||||||| |||| |||||||| ||| || |||||||||| |||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcg 7032  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 63780 - 63831
Alignment:
Q  151 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 202  Q
    ||||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  63780 ctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 16182 - 16244
Alignment:
Q  192 gtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccga 254  Q
    |||||||||||||||||||||| ||||| |||| | | | ||||| ||||||| |||||||||    
T  16182 gtgtcggtgtcgtgttggtgtcggacacaatacgtatccaacaccgggacacgtctaatccga 16244  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 206  Q
    |||||||| ||  ||||||||||||| |||||| ||| |||||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 85040 - 84922
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacac 235  Q
    ||||||||||||| |||| |||||| |  |||||| ||||||  ||||| ||| |  |||||||||| ||| | ||||  |||| | || ||| |||||     
T  85040 gacacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtccgacaa 84941  T
Q  236 caggacacgcctaatccga 254  Q
    |||||||||||||||||||    
T  84940 caggacacgcctaatccga 84922  T

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Target: scaffold0623 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 6064 - 5931
Alignment:
Q  135 cgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgaca 234  Q
    ||||||||||| ||| |||||  ||| |  |||||||| ||| ||||||| ||| | ||||||||||||| | ||||||  |||||| || |||  ||||    
T  6064 cgacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgaca 5965  T
Q  235 ccaggacacgcctaatccgaggagtgtctgtgcc 268  Q
    |   ||||||||| |||| ||||||||| |||||    
T  5964 cagagacacgccttatccaaggagtgtccgtgcc 5931  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 26385 - 26446
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 197  Q
    |||||| |||||| |||||||||||||  ||||||||||||||| ||| |||| | ||||||    
T  26385 gacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 45563 - 45530
Alignment:
Q  170 acataattcagtgtagttacaagtgtcggtgtcg 203  Q
    ||||||||||||||| ||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcg 45530  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 1027 - 1075
Alignment:
Q  136 gacacgccgacacaactaataatttgaagaaatcacataattcagtgta 184  Q
    ||||| |||||||  ||||||||||||| |||| |||||||||||||||    
T  1027 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 1075  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 21051 - 21119
Alignment:
Q  152 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacg 220  Q
    |||||||||||  ||||||||||| || || || ||| | |||||||| |||||| |||||||||||||    
T  21051 taataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacg 21119  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 13455 - 13531
Alignment:
Q  186 ttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgttcgacaccaggacacgcctaatccgaggagtgtc 262  Q
    ||||| ||||||| ||||||| |||||| ||||||| || | | ||||| | ||| || ||||||||||||||||||    
T  13455 ttacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtc 13531  T

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