View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12268_low_18 (Length: 226)
Name: NF12268_low_18
Description: NF12268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12268_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 2630895 - 2631086
Alignment:
| Q |
14 |
gcacagacaagaaccctactccatcaatcaagaccattgatgtgatctccaacgaactcccgtgtttgtcgccgggtttcacggaaacactcgcaaacga |
113 |
Q |
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| T |
2630895 |
gcacagacaagaaccctactccatcaatcaagaccattgatgtgatctccaacgaactcccgtgtttgtcgtcgggcttcacggaaacactcgcaaacga |
2630994 |
T |
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| Q |
114 |
gaccttacagaaagggggttatgcgccacaataaggacaagatgcacatttctaccgctttcaaggcctcagcctatatcttacaaaacggg |
205 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2630995 |
gaccttacagcaagggggttatgcgccacaataaggacaagatgcacatttctaccgctttcaaggcctcagcctatatcttacaaaacggg |
2631086 |
T |
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