View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12269_low_2 (Length: 457)

Name: NF12269_low_2
Description: NF12269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12269_low_2
NF12269_low_2
[»] chr7 (19 HSPs)
chr7 (194-409)||(35119034-35119249)
chr7 (1-129)||(35119314-35119442)
chr7 (1-61)||(23552117-23552177)
chr7 (410-446)||(35118962-35118998)
chr7 (1-60)||(25021352-25021411)
chr7 (1-60)||(26459427-26459486)
chr7 (3-61)||(45709727-45709785)
chr7 (1-61)||(26526289-26526349)
chr7 (1-57)||(36803644-36803700)
chr7 (1-53)||(41519281-41519333)
chr7 (1-60)||(7801180-7801239)
chr7 (1-60)||(22760863-22760922)
chr7 (1-60)||(42836018-42836077)
chr7 (6-60)||(25956314-25956368)
chr7 (1-61)||(17041029-17041089)
chr7 (4-48)||(21877820-21877864)
chr7 (4-60)||(23301622-23301678)
chr7 (1-61)||(43215183-43215243)
chr7 (4-60)||(48771938-48771994)
[»] chr1 (20 HSPs)
chr1 (1-61)||(8177199-8177259)
chr1 (1-60)||(9165212-9165271)
chr1 (1-60)||(51703779-51703838)
chr1 (1-58)||(33700790-33700847)
chr1 (1-61)||(8904413-8904473)
chr1 (1-61)||(36371469-36371529)
chr1 (4-48)||(52336794-52336838)
chr1 (1-60)||(31794281-31794340)
chr1 (1-60)||(47753714-47753773)
chr1 (3-61)||(25297771-25297829)
chr1 (21-62)||(2074000-2074041)
chr1 (1-62)||(6122792-6122853)
chr1 (27-60)||(38978985-38979018)
chr1 (1-42)||(44046165-44046206)
chr1 (19-59)||(2069657-2069697)
chr1 (1-61)||(6650594-6650654)
chr1 (1-53)||(15786337-15786389)
chr1 (1-53)||(24730391-24730443)
chr1 (1-61)||(41508830-41508890)
chr1 (1-61)||(51814493-51814553)
[»] chr6 (6 HSPs)
chr6 (1-64)||(12188320-12188383)
chr6 (3-60)||(24641209-24641266)
chr6 (3-53)||(6776626-6776676)
chr6 (3-60)||(9433609-9433666)
chr6 (1-58)||(32613157-32613214)
chr6 (4-40)||(6385882-6385918)
[»] chr5 (9 HSPs)
chr5 (3-60)||(14495824-14495881)
chr5 (6-61)||(26598523-26598578)
chr5 (1-63)||(29692403-29692465)
chr5 (3-60)||(29075781-29075838)
chr5 (1-61)||(87440-87500)
chr5 (4-60)||(21549157-21549213)
chr5 (1-61)||(30883215-30883275)
chr5 (1-62)||(34984804-34984865)
chr5 (24-60)||(892514-892550)
[»] chr8 (15 HSPs)
chr8 (1-57)||(35690081-35690137)
chr8 (5-60)||(20994479-20994534)
chr8 (3-61)||(16852339-16852397)
chr8 (1-58)||(2203494-2203551)
chr8 (1-61)||(12988427-12988487)
chr8 (1-61)||(19703504-19703564)
chr8 (1-60)||(23361666-23361725)
chr8 (1-60)||(32157191-32157250)
chr8 (3-61)||(5264543-5264601)
chr8 (2-60)||(30483902-30483960)
chr8 (1-58)||(3624582-3624639)
chr8 (3-40)||(7140729-7140766)
chr8 (4-48)||(6569791-6569835)
chr8 (3-59)||(29858068-29858124)
chr8 (1-61)||(44780131-44780191)
[»] chr3 (19 HSPs)
chr3 (1-61)||(7975417-7975477)
chr3 (1-53)||(28928896-28928948)
chr3 (1-61)||(46518627-46518687)
chr3 (1-60)||(4222141-4222200)
chr3 (1-60)||(14339610-14339669)
chr3 (3-56)||(4844530-4844583)
chr3 (3-56)||(4870226-4870279)
chr3 (3-60)||(31788989-31789046)
chr3 (1-61)||(30311305-30311365)
chr3 (1-48)||(32651455-32651502)
chr3 (22-60)||(203090-203128)
chr3 (18-60)||(16991542-16991584)
chr3 (3-61)||(31520624-31520682)
chr3 (3-56)||(2667866-2667919)
chr3 (4-61)||(5499427-5499484)
chr3 (1-61)||(11642226-11642286)
chr3 (1-61)||(15048078-15048138)
chr3 (1-61)||(27093378-27093438)
chr3 (24-60)||(28562427-28562463)
[»] chr2 (14 HSPs)
chr2 (1-61)||(34041605-34041665)
chr2 (1-60)||(42327412-42327471)
chr2 (1-59)||(16918595-16918653)
chr2 (24-60)||(23922162-23922198)
chr2 (1-61)||(29503270-29503330)
chr2 (1-61)||(42602553-42602613)
chr2 (1-60)||(4438996-4439055)
chr2 (1-60)||(42922414-42922473)
chr2 (3-61)||(39714991-39715049)
chr2 (4-53)||(3001386-3001435)
chr2 (1-62)||(37480073-37480134)
chr2 (4-48)||(12994396-12994440)
chr2 (3-43)||(28846708-28846748)
chr2 (4-60)||(40416410-40416466)
[»] chr4 (7 HSPs)
chr4 (1-60)||(37109368-37109427)
chr4 (18-63)||(27965544-27965589)
chr4 (3-60)||(47044717-47044774)
chr4 (1-45)||(38869783-38869827)
chr4 (1-61)||(51250539-51250599)
chr4 (1-61)||(19680805-19680865)
chr4 (4-60)||(28635696-28635752)
[»] scaffold0070 (1 HSPs)
scaffold0070 (2-60)||(42538-42596)
[»] scaffold1367 (1 HSPs)
scaffold1367 (3-47)||(859-903)
[»] scaffold0299 (1 HSPs)
scaffold0299 (3-47)||(11541-11585)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-53)||(94988-95040)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 194 - 409
Target Start/End: Complemental strand, 35119249 - 35119034
Alignment:
Q  194 tcttaattttactatatgttattttaaataaagaattgtgaaaagaatccaactcgaggggctgaacaaacaacatcgtatcaccccctcccctccatac 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35119249 tcttaattttactatatgttattttaaataaagaattgtgaaaagaatccaactcgaggggctgaacaaacaacatcgtatcaccccctcccctccatac 35119150  T
Q  294 taccgcccctccatcgtccaccaccactactcctactcacctccttcaaatctaaacccaccctccactacgtagctagacaacgctggtggtgcgcacc 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35119149 taccgcccctccatcgtccaccaccactactcctactcacctccttcaaatctaaacccaccctccactacgtagctagacaacgctggtggtgcgcacc 35119050  T
Q  394 atcgaacaaataaatt 409  Q
    ||||||||||||||||    
T  35119049 atcgaacaaataaatt 35119034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35119442 - 35119314
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttgtaacttataagttcaaatgatcaaaatagatttggatg 100  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35119442 ttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtttgtaacttataagttcaaatgatcaaaatagatttggatg 35119343  T
Q  101 gtaataatctttttcttgcaagtttatag 129  Q
    |||||||||||||||||||||||||||||    
T  35119342 gtaataatctttttcttgcaagtttatag 35119314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23552177 - 23552117
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||| ||||||||||||| ||||||||||| |||| |||||||    
T  23552177 ttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 446
Target Start/End: Complemental strand, 35118998 - 35118962
Alignment:
Q  410 cacttatctacaaactaatttatcatgttacacaggt 446  Q
    |||||||||||||||||||||||||||||||||||||    
T  35118998 cacttatctacaaactaatttatcatgttacacaggt 35118962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25021352 - 25021411
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  25021352 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26459427 - 26459486
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  26459427 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 45709727 - 45709785
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  | |||||||||||  |||||||||||||||| ||||||||||||    
T  45709727 gaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26526349 - 26526289
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  | || |||| ||||||||||||| || |||||||||||||||||    
T  26526349 ttgaggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggttt 26526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36803644 - 36803700
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgg 57  Q
    ||||||||||||| |  ||||| |||||||||||||||||||| |||| ||||||||    
T  36803644 ttgaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaaatgg 36803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41519281 - 41519333
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||||||||||||||  || | |||||||||||||||||||||||||| ||||    
T  41519281 ttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaa 41519333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7801239 - 7801180
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||| ||||||||||  ||||| ||||||||||||||||| ||||||| |||| ||||||    
T  7801239 ttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22760922 - 22760863
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||||||||||||| || |||| |||| ||||||    
T  22760922 ttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42836018 - 42836077
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||| |||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  42836018 ttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  6 gaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||  || || ||||||| ||||||||||||||||| |||||||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17041029 - 17041089
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||   |||||||||||| |||| ||||||| |||| |||| |||||||    
T  17041029 ttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 21877864 - 21877820
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaa 48  Q
    |||||||||||   ||||| |||||||||||||||||||||||||    
T  21877864 aggaggagcaccctcccaggtcccaagtcaataccactaggccaa 21877820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 23301622 - 23301678
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||  ||||  ||||||||||||||||| ||||||| |||| ||||||    
T  23301622 aggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43215243 - 43215183
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  || || ||||||| |||||||||||| |||| |||| |||||||    
T  43215243 ttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 48771994 - 48771938
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||  ||||||||||||| ||||||||| | ||||| |||| ||||||    
T  48771994 aggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8177199 - 8177259
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||  |||||||||||    
T  8177199 ttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9165212 - 9165271
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  9165212 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51703838 - 51703779
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||||| ||||| |||||||||||| |||| |||||||||||    
T  51703838 ttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33700790 - 33700847
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatggg 58  Q
    |||||||||||||||  ||||||| ||||| ||||||||||||||||| |||| ||||    
T  33700790 ttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8904473 - 8904413
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  | || ||||||||||||||| |||||||||| |||| |||||||    
T  8904473 ttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36371529 - 36371469
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||| | ||||| ||||||||||||||||| |||| |||||||    
T  36371529 ttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 52336794 - 52336838
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaa 48  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||    
T  52336794 aggaggagcacactcccagatcccaagccaataccactaggccaa 52336838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31794281 - 31794340
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||  ||||||| ||||||||||||||||| |||| ||||||    
T  31794281 ttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47753773 - 47753714
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||| || ||||||||||||||||| || ||| ||| | |||||||||    
T  47753773 ttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacctaaatgggtt 47753714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 25297829 - 25297771
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  | ||||||| |||||||||||||||| |||| |||| |||||||    
T  25297829 gaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 2074041 - 2074000
Alignment:
Q  21 agatcccaagtcaataccactaggccaatccaaatgggtttg 62  Q
    ||||||||||||||||| || ||||||| |||||||||||||    
T  2074041 agatcccaagtcaatacaaccaggccaacccaaatgggtttg 2074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6122853 - 6122792
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttg 62  Q
    |||||||||||||||  ||||  ||||||| | ||||||||||| ||| |||||||||||||    
T  6122853 ttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtttg 6122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 38978985 - 38979018
Alignment:
Q  27 caagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  38978985 caagtcaataccactaggccaacccaaatgggtt 38979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44046165 - 44046206
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccacta 42  Q
    |||||||||||||||  ||||||||||||| |||||||||||    
T  44046165 ttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 2069697 - 2069657
Alignment:
Q  19 ccagatcccaagtcaataccactaggccaatccaaatgggt 59  Q
    ||||||||||||||||||| || ||||||| ||||||||||    
T  2069697 ccagatcccaagtcaatacaaccaggccaacccaaatgggt 2069657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6650654 - 6650594
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    ||||||||||||| |  ||| ||||||||| ||||||||||||||||| | || |||||||    
T  6650654 ttgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15786337 - 15786389
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||||||||||||||  ||||||||||||| |||||| ||||| |||| ||||    
T  15786337 ttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaa 15786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24730443 - 24730391
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||| ||||||||||  |||||||| |||| ||||||||||||||||| ||||    
T  24730443 ttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaa 24730391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41508890 - 41508830
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||  || |||||| ||||||| |||| |||||||    
T  41508890 ttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51814553 - 51814493
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  | |||||| |||||||||||||  ||||||| |||| |||||||    
T  51814553 ttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12188320 - 12188383
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttgta 64  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||||||    
T  12188320 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtttgta 12188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 24641209 - 24641266
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||  ||||||||||||||||||||||| | ||||| |||||||||||    
T  24641209 gaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 6776626 - 6776676
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||| ||||    
T  6776626 gaggaggagcacacccccagatcccaagccaataccaccaggccaacccaa 6776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 9433609 - 9433666
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||| |||||||  |||||||||||||||||||||||  || |||||||| ||||||    
T  9433609 gaggaagagcacactcccagatcccaagtcaataccacagggtcaatccaagtgggtt 9433666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32613157 - 32613214
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatggg 58  Q
    ||||| |||||||||  |||||| |||||||||||||||| ||||||| |||| ||||    
T  32613157 ttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 6385918 - 6385882
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccac 40  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  6385918 aggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 14495824 - 14495881
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||  ||||||||||||||||||||||| || |||| |||||||||||    
T  14495824 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  6 gaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    ||||||||||  | ||||||||||| |||||||||||||||||||||| |||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29692403 - 29692465
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttgt 63  Q
    |||||||||||||||  ||||||||||||  ||||||||| || |||| ||||||||||||||    
T  29692403 ttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtttgt 29692465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 29075838 - 29075781
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||  ||||||||||||| |||||||||||||| || |||| ||||||    
T  29075838 gaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 87440 - 87500
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||| ||||| ||||||||||||||||| | || |||||||    
T  87440 ttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30883215 - 30883275
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||| ||||||| |||||||||||| |||| |||| |||||||    
T  30883215 ttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34984865 - 34984804
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttg 62  Q
    |||||||||||||||  ||||| | ||||| |||||||||||| |||| |||| ||||||||    
T  34984865 ttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtttg 34984804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 892514 - 892550
Alignment:
Q  24 tcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  892514 tcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35690081 - 35690137
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgg 57  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||  |||||||    
T  35690081 ttgaggaggagcaaacacccagatcccaagccaataccactaggccaacacaaatgg 35690137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  5 ggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||  ||||| ||||||||||||||||||||||||| |||| ||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 16852397 - 16852339
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||| |||| |||||||    
T  16852397 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2203551 - 2203494
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatggg 58  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||    
T  2203551 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12988487 - 12988427
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||   |||| | ||||| |||||||||||||||||||||| |||||||    
T  12988487 ttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggttt 12988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19703504 - 19703564
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  | ||| ||||||| ||||||||||||||||| |||| |||||||    
T  19703504 ttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23361666 - 23361725
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  |||| |||||||||||||||||| ||| ||| |||| ||||||    
T  23361666 ttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32157250 - 32157191
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||| |  || || ||||||||||||||||| ||||||| |||||||||||    
T  32157250 ttgaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 5264601 - 5264543
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  ||||| | ||||| ||||||||||||||||| |||| |||||||    
T  5264601 gaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 30483902 - 30483960
Alignment:
Q  2 tgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||||  |||| |||||||| |||||||||| |||||| |||| ||||||    
T  30483902 tgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3624639 - 3624582
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatggg 58  Q
    |||| ||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||    
T  3624639 ttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 7140766 - 7140729
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccac 40  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  7140766 gaggaggagcacacacccagatcccaagccaataccac 7140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 6569791 - 6569835
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaa 48  Q
    ||||||||||||  ||||||||||||| ||||| |||||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaa 6569835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 29858068 - 29858124
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggt 59  Q
    |||||||||||||  ||| | ||||||| ||||||||| |||||||||||| |||||    
T  29858068 gaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44780131 - 44780191
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||  ||||||| |||| |||||||||||| |||| |||||||    
T  44780131 ttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

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Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7975477 - 7975417
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||| | ||||||||||||||| | ||||||||||    
T  7975477 ttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28928896 - 28928948
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||||||||||||||  | ||||||||||| ||||||||||||||||||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaataccactaggccaatccaa 28928948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46518687 - 46518627
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||| ||||||||||| ||||| |||| |||||||    
T  46518687 ttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4222200 - 4222141
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||||||||||| ||||||||||| ||||| |||| ||||||    
T  4222200 ttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14339669 - 14339610
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  |||| |||||||| ||||||||| |||||||||||| ||||||    
T  14339669 ttgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4844530 - 4844583
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatg 56  Q
    |||||||||||||  ||||||||||||||||||||||| || |||| |||||||    
T  4844530 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatg 4844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4870226 - 4870279
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatg 56  Q
    |||||||||||||  ||||||||||||||||||||||| || |||| |||||||    
T  4870226 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatg 4870279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 31788989 - 31789046
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||  ||||||||||||| ||||| ||||||||||| |||| ||||||    
T  31788989 gaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30311365 - 30311305
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||| | ||||||||||||||| |||  |||||||    
T  30311365 ttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32651455 - 32651502
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaa 48  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||||    
T  32651455 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 32651502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 203128 - 203090
Alignment:
Q  22 gatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  203128 gatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 16991584 - 16991542
Alignment:
Q  18 cccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||    
T  16991584 cccagatcccaagccaataccaccaggccaacccaaatgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 31520624 - 31520682
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  ||||||||||||| |||| |||| ||||||| |||| |||||||    
T  31520624 gaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 2667919 - 2667866
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatg 56  Q
    ||||| |||||||  ||||||||||||| ||||||||| ||||||| |||||||    
T  2667919 gaggaagagcacactcccagatcccaagccaataccaccaggccaacccaaatg 2667866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 5499427 - 5499484
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    ||||||||||||  | |||||| |||||||||||||| ||||||| |||| |||||||    
T  5499427 aggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11642226 - 11642286
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||| ||||  | ||||||||||||  |||||| ||||||||||||| |||||||    
T  11642226 ttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggttt 11642286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15048078 - 15048138
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||||||||||| | |||||| || ||||| |||| |||||||    
T  15048078 ttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27093378 - 27093438
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||  | ||||| ||||||||||||||||| |||| |||||||    
T  27093378 ttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 28562463 - 28562427
Alignment:
Q  24 tcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||||||||||| |||||| |||||    
T  28562463 tcccaagtcaataccactaggccactccaaaggggtt 28562427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34041605 - 34041665
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||||| |||| |||||||    
T  34041605 ttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42327412 - 42327471
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  42327412 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16918595 - 16918653
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggt 59  Q
    |||||||||||||||  ||||||||||||  ||||||||||||||||| |||| |||||    
T  16918595 ttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 23922162 - 23922198
Alignment:
Q  24 tcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23922162 tcccaagtcaataccactaggtcaatccaaatgggtt 23922198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29503330 - 29503270
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||||  ||||| ||||||  ||||||||||||||||| |||| |||||||    
T  29503330 ttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42602613 - 42602553
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    ||||| |||||||||  ||||| ||||||| ||||||||||||||||| |||| |||||||    
T  42602613 ttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4438996 - 4439055
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  | |||||||||||| ||||||| |||||||| |||| ||||||    
T  4438996 ttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42922473 - 42922414
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| | ||||| ||||||||||||||||| |||| ||||||    
T  42922473 ttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 39715049 - 39714991
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||||||||||  ||||| ||||||||||||||||| | ||||| |||| |||||||    
T  39715049 gaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3001435 - 3001386
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    ||||||||||||  || ||||| |||||||||||||||||||||| ||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaacccaa 3001386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37480134 - 37480073
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtttg 62  Q
    |||||||||||||||  | ||| ||||||| ||||||||| ||||||| |||| ||||||||    
T  37480134 ttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtttg 37480073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 12994396 - 12994440
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaa 48  Q
    ||||||||||||  ||||| |||||||||||||||||||| ||||    
T  12994396 aggaggagcacactcccaggtcccaagtcaataccactagaccaa 12994440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28846748 - 28846708
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactag 43  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  28846748 gaggaggagcacactcccaggtcccaagtcaataccactag 28846708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 40416410 - 40416466
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||| |  ||||| | ||||||||||||||||||||||| |||| ||||||    
T  40416410 aggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37109368 - 37109427
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| ||||||    
T  37109368 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27965544 - 27965589
Alignment:
Q  18 cccagatcccaagtcaataccactaggccaatccaaatgggtttgt 63  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||    
T  27965544 cccagatcccaagccaataccactaggccaacccaagtgggtttgt 27965589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 47044774 - 47044717
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||| |  | ||||||||||||||||||||| |||||||||||| ||||||    
T  47044774 gaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38869827 - 38869783
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggc 45  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  38869827 ttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51250539 - 51250599
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    |||||| ||||||||  ||||||||||||| ||||||||| ||||||| |||| |||||||    
T  51250539 ttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19680805 - 19680865
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggttt 61  Q
    ||||||| |||||||  ||||  |||||||  ||||||||||||||||||||| |||||||    
T  19680805 ttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggttt 19680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 28635752 - 28635696
Alignment:
Q  4 aggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    ||||||||||||  |||||||||||||||| |||||| ||| ||| |||| ||||||    
T  28635752 aggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 42538 - 42596
Alignment:
Q  2 tgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaaatgggtt 60  Q
    |||||||||||| |  ||||||| ||||||||||||||||||||||| |||| ||||||    
T  42538 tgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 859 - 903
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggcca 47  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||    
T  859 gaggaggagcacattcccagatcccaagccaataccaccaggcca 903  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 11585 - 11541
Alignment:
Q  3 gaggaggagcacagacccagatcccaagtcaataccactaggcca 47  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||    
T  11585 gaggaggagcacactcccagatcccaagccaataccaccaggcca 11541  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 94988 - 95040
Alignment:
Q  1 ttgaggaggagcacagacccagatcccaagtcaataccactaggccaatccaa 53  Q
    |||||||||||||||  ||||| | ||||| ||||||||||||||||| ||||    
T  94988 ttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaa 95040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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