View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12272_low_2 (Length: 902)

Name: NF12272_low_2
Description: NF12272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12272_low_2
NF12272_low_2
[»] chr7 (27 HSPs)
chr7 (346-607)||(35077972-35078233)
chr7 (682-893)||(35078308-35078519)
chr7 (12-180)||(35077638-35077806)
chr7 (12-151)||(35082545-35082684)
chr7 (59-151)||(35098856-35098948)
chr7 (12-151)||(35091999-35092153)
chr7 (59-151)||(35072519-35072611)
chr7 (19-108)||(43028470-43028560)
chr7 (29-107)||(42797630-42797708)
chr7 (23-107)||(45999670-45999754)
chr7 (253-286)||(35077879-35077912)
chr7 (70-107)||(36744076-36744113)
chr7 (150-180)||(12180038-12180068)
chr7 (150-180)||(15984328-15984358)
chr7 (150-180)||(16274577-16274607)
chr7 (150-180)||(17358151-17358181)
chr7 (150-180)||(24932099-24932129)
chr7 (150-180)||(25728338-25728368)
chr7 (150-180)||(30538245-30538275)
chr7 (150-180)||(38651932-38651962)
chr7 (150-180)||(41745236-41745266)
chr7 (150-180)||(43989150-43989180)
chr7 (150-180)||(46134773-46134803)
chr7 (150-180)||(46483730-46483760)
chr7 (151-180)||(3687729-3687758)
chr7 (257-286)||(22317218-22317247)
chr7 (150-179)||(39868575-39868604)
[»] chr5 (23 HSPs)
chr5 (12-151)||(9664449-9664588)
chr5 (150-180)||(6143423-6143453)
chr5 (150-180)||(6802222-6802252)
chr5 (150-180)||(7884926-7884956)
chr5 (150-180)||(8406065-8406095)
chr5 (150-180)||(10690940-10690970)
chr5 (150-180)||(12369572-12369602)
chr5 (150-180)||(13003904-13003934)
chr5 (150-180)||(13078560-13078590)
chr5 (150-180)||(13892673-13892703)
chr5 (150-180)||(13952566-13952596)
chr5 (150-180)||(14435749-14435779)
chr5 (150-180)||(20352780-20352810)
chr5 (150-180)||(21262712-21262742)
chr5 (150-180)||(26006621-26006651)
chr5 (150-180)||(26404989-26405019)
chr5 (150-180)||(27451404-27451434)
chr5 (150-180)||(27830063-27830093)
chr5 (150-180)||(29690573-29690603)
chr5 (150-180)||(34974149-34974179)
chr5 (150-180)||(38678287-38678317)
chr5 (150-180)||(39886621-39886651)
chr5 (150-179)||(16867869-16867898)
[»] chr2 (26 HSPs)
chr2 (346-461)||(652077-652184)
chr2 (150-180)||(1151301-1151331)
chr2 (150-180)||(1320711-1320741)
chr2 (150-180)||(2077190-2077220)
chr2 (150-180)||(2531935-2531965)
chr2 (150-180)||(5513591-5513621)
chr2 (150-180)||(7511494-7511524)
chr2 (150-180)||(7515778-7515808)
chr2 (150-180)||(8224535-8224565)
chr2 (150-180)||(9273643-9273673)
chr2 (150-180)||(12883190-12883220)
chr2 (150-180)||(14274333-14274363)
chr2 (150-180)||(18115455-18115485)
chr2 (150-180)||(20100906-20100936)
chr2 (150-180)||(20513777-20513807)
chr2 (150-180)||(20962152-20962182)
chr2 (150-180)||(25301417-25301447)
chr2 (150-180)||(25890655-25890685)
chr2 (150-180)||(27927041-27927071)
chr2 (150-180)||(33216535-33216565)
chr2 (150-180)||(34963500-34963530)
chr2 (150-180)||(36202228-36202258)
chr2 (150-180)||(39615730-39615760)
chr2 (150-180)||(40926826-40926856)
chr2 (150-179)||(24388713-24388742)
chr2 (151-180)||(44354010-44354039)
[»] chr1 (17 HSPs)
chr1 (366-433)||(23725281-23725348)
chr1 (150-180)||(1613699-1613729)
chr1 (150-180)||(1819191-1819221)
chr1 (150-180)||(6587626-6587656)
chr1 (150-180)||(6953988-6954018)
chr1 (150-180)||(11586337-11586367)
chr1 (150-180)||(15734582-15734612)
chr1 (150-180)||(16087295-16087325)
chr1 (150-180)||(16985298-16985328)
chr1 (150-180)||(22374709-22374739)
chr1 (150-180)||(29641739-29641769)
chr1 (150-180)||(39935039-39935069)
chr1 (150-180)||(40633235-40633265)
chr1 (150-180)||(44345110-44345140)
chr1 (150-180)||(44545741-44545771)
chr1 (150-180)||(48044832-48044862)
chr1 (150-179)||(9403431-9403460)
[»] scaffold0316 (1 HSPs)
scaffold0316 (718-803)||(2534-2619)
[»] scaffold0002 (1 HSPs)
scaffold0002 (366-427)||(332821-332881)
[»] chr4 (15 HSPs)
chr4 (718-803)||(23011450-23011535)
chr4 (347-393)||(5414905-5414951)
chr4 (150-180)||(6458070-6458100)
chr4 (150-180)||(11347364-11347394)
chr4 (150-180)||(13168929-13168959)
chr4 (150-180)||(17697262-17697292)
chr4 (150-180)||(19042181-19042211)
chr4 (150-180)||(19203696-19203726)
chr4 (150-180)||(19291493-19291523)
chr4 (150-180)||(19495558-19495588)
chr4 (150-180)||(20570007-20570037)
chr4 (150-180)||(22324588-22324618)
chr4 (150-180)||(39489265-39489295)
chr4 (150-180)||(47465285-47465315)
chr4 (150-179)||(10264507-10264536)
[»] chr3 (27 HSPs)
chr3 (347-393)||(18743962-18744008)
chr3 (150-180)||(3526686-3526716)
chr3 (150-180)||(5047314-5047344)
chr3 (150-180)||(5154844-5154874)
chr3 (150-180)||(6019506-6019536)
chr3 (150-180)||(7731416-7731446)
chr3 (150-180)||(7862545-7862575)
chr3 (150-180)||(11914949-11914979)
chr3 (150-180)||(13207599-13207629)
chr3 (150-180)||(21015348-21015378)
chr3 (150-180)||(21802320-21802350)
chr3 (150-180)||(24234152-24234182)
chr3 (150-180)||(25025070-25025100)
chr3 (150-180)||(30751324-30751354)
chr3 (150-180)||(32858260-32858290)
chr3 (150-180)||(33312443-33312473)
chr3 (150-180)||(38560163-38560193)
chr3 (150-180)||(39825591-39825621)
chr3 (150-180)||(39937164-39937194)
chr3 (150-180)||(40003983-40004013)
chr3 (150-180)||(40717464-40717494)
chr3 (150-180)||(49817707-49817737)
chr3 (150-180)||(52866068-52866098)
chr3 (150-180)||(53050038-53050068)
chr3 (150-180)||(55120725-55120755)
chr3 (253-286)||(13439905-13439938)
chr3 (257-286)||(26932551-26932580)
[»] scaffold1130 (1 HSPs)
scaffold1130 (150-180)||(1360-1390)
[»] scaffold0744 (1 HSPs)
scaffold0744 (150-180)||(1411-1441)
[»] scaffold0740 (1 HSPs)
scaffold0740 (150-180)||(3001-3031)
[»] scaffold0734 (1 HSPs)
scaffold0734 (150-180)||(3079-3109)
[»] scaffold0599 (1 HSPs)
scaffold0599 (150-180)||(6700-6730)
[»] scaffold0420 (1 HSPs)
scaffold0420 (150-180)||(4392-4422)
[»] scaffold0235 (1 HSPs)
scaffold0235 (150-180)||(24299-24329)
[»] scaffold0199 (1 HSPs)
scaffold0199 (150-180)||(11950-11980)
[»] scaffold0148 (1 HSPs)
scaffold0148 (150-180)||(24576-24606)
[»] scaffold0090 (1 HSPs)
scaffold0090 (150-180)||(15474-15504)
[»] scaffold0043 (1 HSPs)
scaffold0043 (150-180)||(47178-47208)
[»] scaffold0038 (1 HSPs)
scaffold0038 (150-180)||(29208-29238)
[»] scaffold0031 (1 HSPs)
scaffold0031 (150-180)||(92812-92842)
[»] scaffold0023 (1 HSPs)
scaffold0023 (150-180)||(125462-125492)
[»] scaffold0001 (1 HSPs)
scaffold0001 (150-180)||(403615-403645)
[»] chr8 (18 HSPs)
chr8 (150-180)||(6163030-6163060)
chr8 (150-180)||(9500905-9500935)
chr8 (150-180)||(10761036-10761066)
chr8 (347-393)||(11425216-11425262)
chr8 (150-180)||(16669402-16669432)
chr8 (150-180)||(18609378-18609408)
chr8 (150-180)||(21589947-21589977)
chr8 (150-180)||(22980917-22980947)
chr8 (150-180)||(23352147-23352177)
chr8 (150-180)||(28898886-28898916)
chr8 (150-180)||(31957409-31957439)
chr8 (150-180)||(34618077-34618107)
chr8 (150-180)||(36574550-36574580)
chr8 (151-180)||(222724-222753)
chr8 (151-180)||(691879-691908)
chr8 (151-180)||(736347-736376)
chr8 (151-180)||(860242-860271)
chr8 (151-180)||(23382821-23382850)
[»] chr6 (13 HSPs)
chr6 (150-180)||(1414736-1414766)
chr6 (150-180)||(2039405-2039435)
chr6 (150-180)||(2255471-2255501)
chr6 (150-180)||(2965680-2965710)
chr6 (150-180)||(4407976-4408006)
chr6 (150-180)||(6176839-6176869)
chr6 (150-180)||(7850607-7850637)
chr6 (150-180)||(19591447-19591477)
chr6 (150-180)||(25948736-25948766)
chr6 (150-180)||(26908359-26908389)
chr6 (150-180)||(28228710-28228740)
chr6 (150-180)||(34101096-34101126)
chr6 (151-180)||(27660482-27660511)
[»] scaffold0009 (1 HSPs)
scaffold0009 (150-179)||(24873-24902)


Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-145; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 346 - 607
Target Start/End: Original strand, 35077972 - 35078233
Alignment:
Q  346 attgattcaagttagaatataaatttgataatatctaattataattcataattttttctttctaaaatccaaaaatgtattacaataacggtaaacaaat 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35077972 attgattcaagttagaatataaatttgataatatctaattataattcataattttttctttctaaaatccaaaaatgtattacaataacggtaaacaaat 35078071  T
Q  446 agaggagatataaacttgacccagaaaatatactaaaagaagtttttattaatttctattgaattttaatagaggtgaatgacacactatttatgtaatt 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35078072 agaggagatataaacttgacccagaaaatatactaaaagaagtttttattaatttctattgaattttaatagaggtgaatgacacactatttatgtaatt 35078171  T
Q  546 tttatctactctacatattcatttgacgagagaatattaagtttaaaaacatttgatagccg 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35078172 tttatctactctacatattcatttgacgagagaatattaagtttaaaaacatttgatagccg 35078233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 682 - 893
Target Start/End: Original strand, 35078308 - 35078519
Alignment:
Q  682 taaacattatatatcaaacccgtgcaacaccaacacgagttcagatctgctcgagtgcaaatctgctccagttttacggttcctttcactgatgcatgac 781  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  35078308 taaacattatatatcaaacccgtgcaacaccaacacgagttcagatctgctcgagtgcaaatctgctccagttttgcggttcctttcattgatgcatgac 35078407  T
Q  782 atgtggcgaatcaaaaatcaacattccactgttccttcatcctctgatttttcttctcctacctagttcagacgttccccagttcacgcctcctcatcat 881  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35078408 atgtggcgaatcaaaaatcaacattccactgttccttcatcctctgatttttcttctcctacctagttcagacgttccccagttcacgcctcctcatcat 35078507  T
Q  882 caccacaggttc 893  Q
    |||||| |||||    
T  35078508 caccaccggttc 35078519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 35077638 - 35077806
Alignment:
Q  12 agaagcataggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacggg 111  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35077638 agaaacataggcagtgctgcaatgtactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacggg 35077737  T
Q  112 ttttgggtgactcacctgtgaagtgagtatgatcatagattttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35077738 ttttgggtgactcacctgtgaagtgagtatgatcatagattttggtttttgaatggcctattaagggtg 35077806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 35082545 - 35082684
Alignment:
Q  12 agaagcataggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacggg 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35082545 agaaacataggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacagg 35082644  T
Q  112 ttttgggtgactcacctgtgaagtgagtatgatcatagat 151  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35082645 ttttgggtgactcacctgtgaagtgagtatgatcatagat 35082684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 35098856 - 35098948
Alignment:
Q  59 gggaccaaacgctatccgagattggcaacctatatacaaacaataaacacgggttttgggtgactcacctgtgaagtgagtatgatcatagat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35098856 gggaccaaacgctatccgagattggcaacctatatacaaacaataaacactggttttgggtgactcacctgtgaagtgagtatgatcatagat 35098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 35091999 - 35092153
Alignment:
Q  12 agaagcataggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacac--- 108  Q
    |||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       
T  35091999 agaaacataggcagtgctgcaatgaattattctgttgtctcacatttgggaccaaacactatccgagattggcaacctatatacaaacaataaacaccaa 35092098  T
Q  109 ------------gggttttgggtgactcacctgtgaagtgagtatgatcatagat 151  Q
                |||||||||||||||||||||||||||||||||||||||||||    
T  35092099 ctagcaaacacggggttttgggtgactcacctgtgaagtgagtatgatcatagat 35092153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 35072519 - 35072611
Alignment:
Q  59 gggaccaaacgctatccgagattggcaacctatatacaaacaataaacacgggttttgggtgactcacctgtgaagtgagtatgatcatagat 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  35072519 gggaccaaacgctatccgagatttgcaacctatatacaaacaataaacactggttttgggcgactcacctgtgaagtgagtatgatcatagat 35072611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 43028560 - 43028470
Alignment:
Q  19 taggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaaccta--tatacaaacaataaacac 108  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43028560 taggcagtgctgcattgcactattccgttgt-tcaaatttgggaccaaacgctatccgagattggcaacctatatatacaaacaataaacac 43028470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 42797708 - 42797630
Alignment:
Q  29 tgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaaca 107  Q
    ||||||| ||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42797708 tgcaatgcactatgccgttatctcaattttgggaccaaccgctatccgagattggcaacctatatacaaacaataaaca 42797630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 45999670 - 45999754
Alignment:
Q  23 cagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaaca 107  Q
    ||||||||||||| |||||  ||| ||||||  ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  45999670 cagtgctgcaatgcactatatcgtagtctcaattttggaaccaaacgctacccgagattggcaacctatacacaaacaataaaca 45999754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 286
Target Start/End: Original strand, 35077879 - 35077912
Alignment:
Q  253 gacatatattacaagggtaaaacactattaaccc 286  Q
    ||||||||||||||||||||||||||||||||||    
T  35077879 gacatatattacaagggtaaaacactattaaccc 35077912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 36744076 - 36744113
Alignment:
Q  70 ctatccgagattggcaacctatatacaaacaataaaca 107  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36744076 ctatccgagattggcaacctgtatacaaacaataaaca 36744113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 12180068 - 12180038
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  12180068 attttggtttttgaatggcctattaagggtg 12180038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 15984328 - 15984358
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  15984328 attttggtttttgaatggcctattaagggtg 15984358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 16274607 - 16274577
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  16274607 attttggtttttgaatggcctattaagggtg 16274577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 17358151 - 17358181
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  17358151 attttggtttttgaatggcctattaagggtg 17358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 24932099 - 24932129
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  24932099 attttggtttttgaatggcctattaagggtg 24932129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 25728338 - 25728368
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  25728338 attttggtttttgaatggcctattaagggtg 25728368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 30538275 - 30538245
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  30538275 attttggtttttgaatggcctattaagggtg 30538245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 38651932 - 38651962
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  38651932 attttggtttttgaatggcctattaagggtg 38651962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 41745236 - 41745266
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  41745236 attttggtttttgaatggcctattaagggtg 41745266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 43989180 - 43989150
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  43989180 attttggtttttgaatggcctattaagggtg 43989150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 46134773 - 46134803
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  46134773 attttggtttttgaatggcctattaagggtg 46134803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 46483760 - 46483730
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  46483760 attttggtttttgaatggcctattaagggtg 46483730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 3687758 - 3687729
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  3687758 ttttggtttttgaatggcctattaagggtg 3687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 286
Target Start/End: Complemental strand, 22317247 - 22317218
Alignment:
Q  257 tatattacaagggtaaaacactattaaccc 286  Q
    ||||||||||||||||||||||||||||||    
T  22317247 tatattacaagggtaaaacactattaaccc 22317218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 39868604 - 39868575
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  39868604 attttggtttttgaatggcctattaagggt 39868575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 2e-58; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 9664588 - 9664449
Alignment:
Q  12 agaagcataggcagtgctgcaatggactattccgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacggg 111  Q
    |||| |||||||||||||||  || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9664588 agaaacataggcagtgctgctttgcactatttcgttgtctcacatttgggaccaaacgctatccgagattggcaacctatatacaaacaataaacacagg 9664489  T
Q  112 ttttgggtgactcacctgtgaagtgagtatgatcatagat 151  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9664488 ttttgggtgactcacctgtgaagtgagtatgatcatagat 9664449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 6143453 - 6143423
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6143453 attttggtttttgaatggcctattaagggtg 6143423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 6802222 - 6802252
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6802222 attttggtttttgaatggcctattaagggtg 6802252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 7884926 - 7884956
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7884926 attttggtttttgaatggcctattaagggtg 7884956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 8406065 - 8406095
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  8406065 attttggtttttgaatggcctattaagggtg 8406095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 10690940 - 10690970
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  10690940 attttggtttttgaatggcctattaagggtg 10690970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 12369602 - 12369572
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  12369602 attttggtttttgaatggcctattaagggtg 12369572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 13003934 - 13003904
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13003934 attttggtttttgaatggcctattaagggtg 13003904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 13078590 - 13078560
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13078590 attttggtttttgaatggcctattaagggtg 13078560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 13892703 - 13892673
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13892703 attttggtttttgaatggcctattaagggtg 13892673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 13952596 - 13952566
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13952596 attttggtttttgaatggcctattaagggtg 13952566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 14435749 - 14435779
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  14435749 attttggtttttgaatggcctattaagggtg 14435779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 20352780 - 20352810
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  20352780 attttggtttttgaatggcctattaagggtg 20352810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 21262742 - 21262712
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  21262742 attttggtttttgaatggcctattaagggtg 21262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 26006651 - 26006621
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  26006651 attttggtttttgaatggcctattaagggtg 26006621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 26405019 - 26404989
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  26405019 attttggtttttgaatggcctattaagggtg 26404989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 27451434 - 27451404
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  27451434 attttggtttttgaatggcctattaagggtg 27451404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 27830093 - 27830063
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  27830093 attttggtttttgaatggcctattaagggtg 27830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 29690603 - 29690573
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  29690603 attttggtttttgaatggcctattaagggtg 29690573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 34974149 - 34974179
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  34974149 attttggtttttgaatggcctattaagggtg 34974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 38678317 - 38678287
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  38678317 attttggtttttgaatggcctattaagggtg 38678287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 39886651 - 39886621
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39886651 attttggtttttgaatggcctattaagggtg 39886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 16867898 - 16867869
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  16867898 attttggtttttgaatggcctattaagggt 16867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 346 - 461
Target Start/End: Complemental strand, 652184 - 652077
Alignment:
Q  346 attgattcaagttagaatataaatttgataatatctaattataattcataattttttctttctaaaatccaaaaatgtattacaataacggtaaacaaat 445  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||| |||||||||| ||||| ||||||||||     
T  652184 attgactcaagttagaatataaatttgataatatctaattataaat--------tttctttctaaaatccacaaatgtattaaaataaaggtaaacaaaa 652093  T
Q  446 agaggagatataaact 461  Q
    | ||||||||||||||    
T  652092 ataggagatataaact 652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 1151301 - 1151331
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1151301 attttggtttttgaatggcctattaagggtg 1151331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 1320741 - 1320711
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1320741 attttggtttttgaatggcctattaagggtg 1320711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 2077190 - 2077220
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  2077190 attttggtttttgaatggcctattaagggtg 2077220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 2531965 - 2531935
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  2531965 attttggtttttgaatggcctattaagggtg 2531935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 5513621 - 5513591
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  5513621 attttggtttttgaatggcctattaagggtg 5513591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 7511494 - 7511524
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7511494 attttggtttttgaatggcctattaagggtg 7511524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 7515778 - 7515808
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7515778 attttggtttttgaatggcctattaagggtg 7515808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 8224535 - 8224565
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  8224535 attttggtttttgaatggcctattaagggtg 8224565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 9273673 - 9273643
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  9273673 attttggtttttgaatggcctattaagggtg 9273643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 12883220 - 12883190
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  12883220 attttggtttttgaatggcctattaagggtg 12883190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 14274363 - 14274333
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  14274363 attttggtttttgaatggcctattaagggtg 14274333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 18115485 - 18115455
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  18115485 attttggtttttgaatggcctattaagggtg 18115455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 20100906 - 20100936
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  20100906 attttggtttttgaatggcctattaagggtg 20100936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 20513807 - 20513777
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  20513807 attttggtttttgaatggcctattaagggtg 20513777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 20962182 - 20962152
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  20962182 attttggtttttgaatggcctattaagggtg 20962152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 25301447 - 25301417
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  25301447 attttggtttttgaatggcctattaagggtg 25301417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 25890685 - 25890655
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  25890685 attttggtttttgaatggcctattaagggtg 25890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 27927071 - 27927041
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  27927071 attttggtttttgaatggcctattaagggtg 27927041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 33216535 - 33216565
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  33216535 attttggtttttgaatggcctattaagggtg 33216565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 34963500 - 34963530
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  34963500 attttggtttttgaatggcctattaagggtg 34963530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 36202258 - 36202228
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  36202258 attttggtttttgaatggcctattaagggtg 36202228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 39615730 - 39615760
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39615730 attttggtttttgaatggcctattaagggtg 39615760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 40926826 - 40926856
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  40926826 attttggtttttgaatggcctattaagggtg 40926856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 24388742 - 24388713
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  24388742 attttggtttttgaatggcctattaagggt 24388713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 44354039 - 44354010
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  44354039 ttttggtttttgaatggcctattaagggtg 44354010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 23725281 - 23725348
Alignment:
Q  366 aaatttgataatatctaattataattcataattttttctttctaaaatccaaaaatgtattacaataa 433  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| ||||| |||||    
T  23725281 aaatttgataatatctaattataattcatatttttttctttcgaaaatcggaaaatatattaaaataa 23725348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 1613729 - 1613699
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1613729 attttggtttttgaatggcctattaagggtg 1613699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 1819221 - 1819191
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1819221 attttggtttttgaatggcctattaagggtg 1819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 6587626 - 6587656
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6587626 attttggtttttgaatggcctattaagggtg 6587656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 6954018 - 6953988
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6954018 attttggtttttgaatggcctattaagggtg 6953988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 11586367 - 11586337
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  11586367 attttggtttttgaatggcctattaagggtg 11586337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 15734612 - 15734582
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  15734612 attttggtttttgaatggcctattaagggtg 15734582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 16087295 - 16087325
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  16087295 attttggtttttgaatggcctattaagggtg 16087325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 16985328 - 16985298
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  16985328 attttggtttttgaatggcctattaagggtg 16985298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 22374709 - 22374739
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  22374709 attttggtttttgaatggcctattaagggtg 22374739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 29641739 - 29641769
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  29641739 attttggtttttgaatggcctattaagggtg 29641769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 39935069 - 39935039
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39935069 attttggtttttgaatggcctattaagggtg 39935039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 40633235 - 40633265
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  40633235 attttggtttttgaatggcctattaagggtg 40633265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 44345140 - 44345110
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  44345140 attttggtttttgaatggcctattaagggtg 44345110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 44545771 - 44545741
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  44545771 attttggtttttgaatggcctattaagggtg 44545741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 48044832 - 48044862
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  48044832 attttggtttttgaatggcctattaagggtg 48044862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 9403460 - 9403431
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  9403460 attttggtttttgaatggcctattaagggt 9403431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 803
Target Start/End: Original strand, 2534 - 2619
Alignment:
Q  718 gagttcagatctgctcgagtgcaaatctgctccagttttacggttcctttcactgatgcatgacatgtggcgaatcaaaaatcaac 803  Q
    |||||||||||||||| |||||  || ||||||| |||| ||||||  ||||| ||||| |||||  |||||||||||||||||||    
T  2534 gagttcagatctgctccagtgcttatatgctccatttttccggttcgattcaccgatgcgtgacacatggcgaatcaaaaatcaac 2619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 332821 - 332881
Alignment:
Q  366 aaatttgataatatctaattataattcataattttttctttctaaaatccaaaaatgtatta 427  Q
    |||||| |||||||||||||||||||||| |||||| || |||||||||||||||| |||||    
T  332821 aaatttaataatatctaattataattcat-atttttcctatctaaaatccaaaaatctatta 332881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 803
Target Start/End: Complemental strand, 23011535 - 23011450
Alignment:
Q  718 gagttcagatctgctcgagtgcaaatctgctccagttttacggttcctttcactgatgcatgacatgtggcgaatcaaaaatcaac 803  Q
    |||||||||||||||| |||||  || ||||||| |||| ||||||  |||||  |||| ||||| ||||||||||||||||||||    
T  23011535 gagttcagatctgctccagtgcttatatgctccatttttccggttcgattcaccaatgcgtgacacgtggcgaatcaaaaatcaac 23011450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 5414951 - 5414905
Alignment:
Q  347 ttgattcaagttagaatataaatttgataatatctaattataattca 393  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||    
T  5414951 ttgattcaagttagaataaaaattttataatatcaaattataattca 5414905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 6458070 - 6458100
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6458070 attttggtttttgaatggcctattaagggtg 6458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 11347364 - 11347394
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  11347364 attttggtttttgaatggcctattaagggtg 11347394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 13168929 - 13168959
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13168929 attttggtttttgaatggcctattaagggtg 13168959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 17697292 - 17697262
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  17697292 attttggtttttgaatggcctattaagggtg 17697262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 19042181 - 19042211
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  19042181 attttggtttttgaatggcctattaagggtg 19042211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 19203726 - 19203696
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  19203726 attttggtttttgaatggcctattaagggtg 19203696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 19291493 - 19291523
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  19291493 attttggtttttgaatggcctattaagggtg 19291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 19495558 - 19495588
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  19495558 attttggtttttgaatggcctattaagggtg 19495588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 20570037 - 20570007
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  20570037 attttggtttttgaatggcctattaagggtg 20570007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 22324588 - 22324618
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  22324588 attttggtttttgaatggcctattaagggtg 22324618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 39489295 - 39489265
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39489295 attttggtttttgaatggcctattaagggtg 39489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 47465315 - 47465285
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  47465315 attttggtttttgaatggcctattaagggtg 47465285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 10264536 - 10264507
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  10264536 attttggtttttgaatggcctattaagggt 10264507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 18743962 - 18744008
Alignment:
Q  347 ttgattcaagttagaatataaatttgataatatctaattataattca 393  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  18743962 ttgactcaagttagaataaaaatttgataatatcaaattataattca 18744008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 3526686 - 3526716
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  3526686 attttggtttttgaatggcctattaagggtg 3526716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 5047314 - 5047344
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  5047314 attttggtttttgaatggcctattaagggtg 5047344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 5154844 - 5154874
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  5154844 attttggtttttgaatggcctattaagggtg 5154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 6019536 - 6019506
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6019536 attttggtttttgaatggcctattaagggtg 6019506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 7731416 - 7731446
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7731416 attttggtttttgaatggcctattaagggtg 7731446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 7862545 - 7862575
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7862545 attttggtttttgaatggcctattaagggtg 7862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 11914979 - 11914949
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  11914979 attttggtttttgaatggcctattaagggtg 11914949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 13207629 - 13207599
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  13207629 attttggtttttgaatggcctattaagggtg 13207599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 21015378 - 21015348
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  21015378 attttggtttttgaatggcctattaagggtg 21015348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 21802350 - 21802320
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  21802350 attttggtttttgaatggcctattaagggtg 21802320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 24234152 - 24234182
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  24234152 attttggtttttgaatggcctattaagggtg 24234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 25025070 - 25025100
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  25025070 attttggtttttgaatggcctattaagggtg 25025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 30751324 - 30751354
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  30751324 attttggtttttgaatggcctattaagggtg 30751354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 32858290 - 32858260
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  32858290 attttggtttttgaatggcctattaagggtg 32858260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 33312473 - 33312443
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  33312473 attttggtttttgaatggcctattaagggtg 33312443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 38560163 - 38560193
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  38560163 attttggtttttgaatggcctattaagggtg 38560193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 39825591 - 39825621
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39825591 attttggtttttgaatggcctattaagggtg 39825621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 39937164 - 39937194
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  39937164 attttggtttttgaatggcctattaagggtg 39937194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 40004013 - 40003983
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  40004013 attttggtttttgaatggcctattaagggtg 40003983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 40717494 - 40717464
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  40717494 attttggtttttgaatggcctattaagggtg 40717464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 49817737 - 49817707
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  49817737 attttggtttttgaatggcctattaagggtg 49817707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 52866098 - 52866068
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  52866098 attttggtttttgaatggcctattaagggtg 52866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 53050068 - 53050038
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  53050068 attttggtttttgaatggcctattaagggtg 53050038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 55120755 - 55120725
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  55120755 attttggtttttgaatggcctattaagggtg 55120725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 286
Target Start/End: Original strand, 13439905 - 13439938
Alignment:
Q  253 gacatatattacaagggtaaaacactattaaccc 286  Q
    ||||||||||||| ||||||||||||||||||||    
T  13439905 gacatatattacaggggtaaaacactattaaccc 13439938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 286
Target Start/End: Original strand, 26932551 - 26932580
Alignment:
Q  257 tatattacaagggtaaaacactattaaccc 286  Q
    ||||||||||||||||||||||||||||||    
T  26932551 tatattacaagggtaaaacactattaaccc 26932580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 1390 - 1360
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1390 attttggtttttgaatggcctattaagggtg 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 1441 - 1411
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1441 attttggtttttgaatggcctattaagggtg 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 3031 - 3001
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  3031 attttggtttttgaatggcctattaagggtg 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 3109 - 3079
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  3109 attttggtttttgaatggcctattaagggtg 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 6730 - 6700
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6730 attttggtttttgaatggcctattaagggtg 6700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 4392 - 4422
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  4392 attttggtttttgaatggcctattaagggtg 4422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 24329 - 24299
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  24329 attttggtttttgaatggcctattaagggtg 24299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 11980 - 11950
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  11980 attttggtttttgaatggcctattaagggtg 11950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 24576 - 24606
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  24576 attttggtttttgaatggcctattaagggtg 24606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 15504 - 15474
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  15504 attttggtttttgaatggcctattaagggtg 15474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 47208 - 47178
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  47208 attttggtttttgaatggcctattaagggtg 47178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 29238 - 29208
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  29238 attttggtttttgaatggcctattaagggtg 29208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 92812 - 92842
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  92812 attttggtttttgaatggcctattaagggtg 92842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 125462 - 125492
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  125462 attttggtttttgaatggcctattaagggtg 125492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 403615 - 403645
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  403615 attttggtttttgaatggcctattaagggtg 403645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000008; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 6163060 - 6163030
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6163060 attttggtttttgaatggcctattaagggtg 6163030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 9500905 - 9500935
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  9500905 attttggtttttgaatggcctattaagggtg 9500935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 10761066 - 10761036
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  10761066 attttggtttttgaatggcctattaagggtg 10761036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 11425262 - 11425216
Alignment:
Q  347 ttgattcaagttagaatataaatttgataatatctaattataattca 393  Q
    |||| ||||||||||||| |||||| |||||||| ||||||||||||    
T  11425262 ttgactcaagttagaataaaaattttataatatcaaattataattca 11425216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 16669402 - 16669432
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  16669402 attttggtttttgaatggcctattaagggtg 16669432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 18609408 - 18609378
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  18609408 attttggtttttgaatggcctattaagggtg 18609378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 21589977 - 21589947
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  21589977 attttggtttttgaatggcctattaagggtg 21589947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 22980947 - 22980917
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  22980947 attttggtttttgaatggcctattaagggtg 22980917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 23352147 - 23352177
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  23352147 attttggtttttgaatggcctattaagggtg 23352177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 28898886 - 28898916
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  28898886 attttggtttttgaatggcctattaagggtg 28898916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 31957439 - 31957409
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  31957439 attttggtttttgaatggcctattaagggtg 31957409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 34618107 - 34618077
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  34618107 attttggtttttgaatggcctattaagggtg 34618077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 36574550 - 36574580
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  36574550 attttggtttttgaatggcctattaagggtg 36574580  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 222753 - 222724
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  222753 ttttggtttttgaatggcctattaagggtg 222724  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 691908 - 691879
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  691908 ttttggtttttgaatggcctattaagggtg 691879  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 736376 - 736347
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  736376 ttttggtttttgaatggcctattaagggtg 736347  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 860271 - 860242
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  860271 ttttggtttttgaatggcctattaagggtg 860242  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 23382821 - 23382850
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  23382821 ttttggtttttgaatggcctattaagggtg 23382850  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000008; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 1414736 - 1414766
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  1414736 attttggtttttgaatggcctattaagggtg 1414766  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 2039435 - 2039405
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  2039435 attttggtttttgaatggcctattaagggtg 2039405  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 2255501 - 2255471
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  2255501 attttggtttttgaatggcctattaagggtg 2255471  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 2965710 - 2965680
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  2965710 attttggtttttgaatggcctattaagggtg 2965680  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 4408006 - 4407976
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  4408006 attttggtttttgaatggcctattaagggtg 4407976  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 6176839 - 6176869
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  6176839 attttggtttttgaatggcctattaagggtg 6176869  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 7850637 - 7850607
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  7850637 attttggtttttgaatggcctattaagggtg 7850607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 19591447 - 19591477
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  19591447 attttggtttttgaatggcctattaagggtg 19591477  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 25948766 - 25948736
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  25948766 attttggtttttgaatggcctattaagggtg 25948736  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 26908389 - 26908359
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  26908389 attttggtttttgaatggcctattaagggtg 26908359  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 28228740 - 28228710
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  28228740 attttggtttttgaatggcctattaagggtg 28228710  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 34101126 - 34101096
Alignment:
Q  150 attttggtttttgaatggcctattaagggtg 180  Q
    |||||||||||||||||||||||||||||||    
T  34101126 attttggtttttgaatggcctattaagggtg 34101096  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 27660511 - 27660482
Alignment:
Q  151 ttttggtttttgaatggcctattaagggtg 180  Q
    ||||||||||||||||||||||||||||||    
T  27660511 ttttggtttttgaatggcctattaagggtg 27660482  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 24902 - 24873
Alignment:
Q  150 attttggtttttgaatggcctattaagggt 179  Q
    ||||||||||||||||||||||||||||||    
T  24902 attttggtttttgaatggcctattaagggt 24873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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