View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12272_low_9 (Length: 245)
Name: NF12272_low_9
Description: NF12272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12272_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 7958230 - 7958364
Alignment:
| Q |
101 |
agatcgaagtttcaagagttcatgatccttcaaaaccaaacaatattaatggttactcaaaattaggttcttcttgtagctccatttgtagctttagaga |
200 |
Q |
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| T |
7958230 |
agatcgaagtttcaagagttcatgatccttcaaaaccaaacaacaataatggttactcaaaattaggttcttcttgtagctccatttgtagctttagaga |
7958329 |
T |
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| Q |
201 |
tgttgttcatggaaacactagagttgttcacaggt |
235 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
7958330 |
tgttgttcatggaaacactagagttgttcataggt |
7958364 |
T |
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