View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12273_high_10 (Length: 309)
Name: NF12273_high_10
Description: NF12273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12273_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 36 - 295
Target Start/End: Complemental strand, 29593562 - 29593303
Alignment:
| Q |
36 |
gaagaagctctcagcatttttaggatataattcatgtcagtgaccatactttggaaattgggtttatggaaatttaccatttcgactaagtctagtttgg |
135 |
Q |
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| T |
29593562 |
gaagaagctctcagcatttttaggatataattcatgtcagtgaccatactttggaaattgggtttatggaaatttaccattttgactaagtctagtttgg |
29593463 |
T |
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| Q |
136 |
cagtgacacttggaatttgaaaaaccaattatttcagcttattttaatttatgtttcttgatattgaatttcattttgttgaaaaaagggtggttaagac |
235 |
Q |
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| T |
29593462 |
cagtgacacttggaatttgaaaaaccaattatttcagcttattttaatttatgtttcttgatattgaatttcattttgttgaaaaaagggtggttaagac |
29593363 |
T |
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| Q |
236 |
ttaagaatgaggggtggaaaaaataggaagctacatttaagcaagatttattcattcaca |
295 |
Q |
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| T |
29593362 |
ttaagaatgaggggtggaaaaaataggaagctacatttaagcaagatttattcattcaca |
29593303 |
T |
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