View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12274_high_12 (Length: 262)
Name: NF12274_high_12
Description: NF12274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12274_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 43244060 - 43243827
Alignment:
| Q |
11 |
cagagactctagggtttcgtcgtttgcacgctattcccttccctttaactttagttctttgtaattgtgatgaattatacgaattcgtttcgcaaatttc |
110 |
Q |
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| T |
43244060 |
cagagactctagggtttcgtcgtttgcacgctattcccttccctttaactttagttctttgtaattgtgatgaattatacgaattcgtttcgcaaatttc |
43243961 |
T |
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| Q |
111 |
caaacctgccctgttcttggatgctgattgtgaagaacaagtctcgatctcagccattggggtttcaatgaatagaagaagcatccatgaaatttgaaat |
210 |
Q |
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| T |
43243960 |
caaacctgccctgttcttggatgctgattgtgaagaacaagtctcgatctcagccattggggtttcaatgaagagaagaagcatccatgaaatttgaaat |
43243861 |
T |
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| Q |
211 |
tttgaagcgcccagcgttataaagatgaattaat |
244 |
Q |
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| T |
43243860 |
tttgaagcgccgagcgttataaagatgaattaat |
43243827 |
T |
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