View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12277_low_1 (Length: 626)

Name: NF12277_low_1
Description: NF12277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12277_low_1
NF12277_low_1
[»] chr4 (64 HSPs)
chr4 (43-558)||(10243713-10244231)
chr4 (353-613)||(10243613-10243873)
chr4 (328-567)||(10217649-10217888)
chr4 (101-298)||(10217936-10218136)
chr4 (353-613)||(10243493-10243753)
chr4 (349-507)||(10243539-10243697)
chr4 (368-573)||(10254414-10254619)
chr4 (371-561)||(10217595-10217785)
chr4 (428-561)||(10217235-10217368)
chr4 (382-573)||(10254384-10254575)
chr4 (386-573)||(10254474-10254661)
chr4 (428-561)||(10217145-10217278)
chr4 (428-561)||(10217325-10217458)
chr4 (449-582)||(10243779-10243912)
chr4 (434-570)||(10217706-10217842)
chr4 (356-564)||(10264716-10264924)
chr4 (398-613)||(10217648-10217863)
chr4 (356-570)||(10217556-10217770)
chr4 (446-606)||(10254171-10254331)
chr4 (398-606)||(10243695-10243918)
chr4 (386-543)||(10254099-10254256)
chr4 (368-558)||(10243443-10243633)
chr4 (386-572)||(10254130-10254316)
chr4 (451-573)||(10264827-10264949)
chr4 (349-498)||(10243428-10243577)
chr4 (446-563)||(10254589-10254706)
chr4 (353-573)||(10217103-10217323)
chr4 (362-570)||(10217466-10217674)
chr4 (427-561)||(10217415-10217549)
chr4 (382-563)||(10254454-10254635)
chr4 (431-567)||(10217079-10217215)
chr4 (398-510)||(10264620-10264732)
chr4 (431-567)||(10264803-10264939)
chr4 (414-561)||(10254366-10254513)
chr4 (446-573)||(10264767-10264894)
chr4 (447-573)||(10264617-10264743)
chr4 (349-561)||(10217505-10217717)
chr4 (419-543)||(10243428-10243552)
chr4 (529-613)||(10243838-10243922)
chr4 (416-567)||(10217289-10217440)
chr4 (431-570)||(10217346-10217485)
chr4 (424-606)||(10243740-10243922)
chr4 (529-606)||(10217790-10217867)
chr4 (371-438)||(10217283-10217350)
chr4 (428-570)||(10217256-10217398)
chr4 (353-435)||(10254477-10254559)
chr4 (428-558)||(10254534-10254664)
chr4 (401-563)||(10264957-10265119)
chr4 (476-573)||(10265157-10265254)
chr4 (431-567)||(10217379-10217515)
chr4 (488-576)||(10254096-10254184)
chr4 (349-561)||(10254306-10254518)
chr4 (494-570)||(10254612-10254688)
chr4 (449-573)||(10265067-10265191)
chr4 (431-570)||(10254327-10254466)
chr4 (368-438)||(10264647-10264717)
chr4 (429-567)||(10264923-10265061)
chr4 (428-561)||(10217055-10217188)
chr4 (392-457)||(10243349-10243414)
chr4 (449-546)||(10265124-10265221)
chr4 (386-438)||(10217373-10217425)
chr4 (352-428)||(10254454-10254530)
chr4 (386-562)||(10254515-10254691)
chr4 (476-560)||(10265140-10265224)


Alignment Details
Target: chr4 (Bit Score: 456; Significance: 0; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 43 - 558
Target Start/End: Complemental strand, 10244231 - 10243713
Alignment:
43 acagaaaattgaactttcatgcaccttactgatatgacagagtattaagtagagtatatata--ctgtgtccaattaagtcaaccaacacaaattaaaaa 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||||||||||||||||    
10244231 acagaaaattgaactttcatgcaccttactgatatgacagagtattaagtagagtatatatatactatgtccaatttagtcaaccaacacaaattaaaaa 10244132  T
141 gtgctaaatcacaacattcttattcataacttggagtacaaatgcaccattttctttcacattcttatcttggtaataggatttgtaaacaaaagactaa 240  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10244131 gtgctaaatcacaacgttcttattcataacttggagtacaaatgcaccattttctttcacattcttatcttggtaataggatttgtaaacaaaagactaa 10244032  T
241 aatgaagattccaagaatatataatccttgctttggaaactttat-tatctcttatttaacttatttacttaaaaacatccgagagtcctatgggtggtg 339  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
10244031 aatgaagattccaagaatatataatccttgctttggaaacattatatatctcttatttaacttatttacttaaaagcatccgagagtcctatgggtggtg 10243932  T
340 aggaggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttg 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10243931 aggaggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttg 10243832  T
440 tagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggag 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |    
10243831 tagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgtagactgggg 10243732  T
540 gcttctcaactggtggctt 558  Q
    |||| | ||| ||||||||    
10243731 gcttgtaaacaggtggctt 10243713  T

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Target: chr4; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 353 - 613
Target Start/End: Complemental strand, 10243873 - 10243613
Alignment:
353 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct 452  Q
    ||||| || ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||    
10243873 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 10243774  T
453 tctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactgg 552  Q
    | |  || || |||||    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10243773 tgtatacaggtggcttcactactggtggcttgtagactgggggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactgg 10243674  T
553 tggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggt 613  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
10243673 tggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggt 10243613  T

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Target: chr4; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 328 - 567
Target Start/End: Complemental strand, 10217888 - 10217649
Alignment:
328 ctatgggtggtgaggaggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaa 427  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||     
10217888 ctatgggtggtgaggtggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtag 10217789  T
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    || || |||||||| || || |||||||| ||||| ||||||||||| || || ||||| || || ||||||||||| || |||||| |||| || || |    
10217788 accggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtt 10217689  T
528 tgtaaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    |||| || || || ||||| ||||| |||||||| |||||    
10217688 tgtagaccgggggtttctcgactgggggcttgtacacagg 10217649  T

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Target: chr4; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 101 - 298
Target Start/End: Complemental strand, 10218136 - 10217936
Alignment:
101 tatactgtgtccaattaagtcaaccaacacaaattaaaaagtgctaaatcacaacattcttattcataacttggagtacaaat-gcaccattttctttca 199  Q
    |||||| |||| |||| ||||||| |||||||| ||| |||| |||||||| ||| ||||||||||||| ||| ||||||||| ||||||||||||||||    
10218136 tatactctgtcaaatttagtcaacaaacacaaaataagaagtactaaatcataacgttcttattcataatttgaagtacaaatggcaccattttctttca 10218037  T
200 cattcttatcttggtaataggatttgtaaacaaaagactaaaatgaaga-ttccaagaatatataatccttgctttggaaactttat-tatctcttattt 297  Q
    || |||| |||||| ||||| ||||||||||| |||| | || |||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||    
10218036 cactcttgtcttggcaatagcatttgtaaacataagattgaattgaagatttccaagaatatatgatccttgctttggaaagtttatatatctcttattt 10217937  T
298 a 298  Q
    |    
10217936 a 10217936  T

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Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 613
Target Start/End: Complemental strand, 10243753 - 10243493
Alignment:
353 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct 452  Q
    ||||||||||| | |||||| ||||||||||| ||||||||    ||||| || || | |||||| ||||| | ||| ||||||||||| || ||||| |    
10243753 actggtggcttgtagactgggggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtt 10243654  T
453 tctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactgg 552  Q
    | |  ||||| || ||    || || || ||||| || || ||||||||||| || |||||| |||||||||| ||||||||||| ||||| |  || ||    
10243653 tgtagactgggggtttcactactgggggtttgtatacaggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccgg 10243554  T
553 tggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggt 613  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10243553 tggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggt 10243493  T

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Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 349 - 507
Target Start/End: Complemental strand, 10243697 - 10243539
Alignment:
349 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 448  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| || ||     
10243697 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgtaaactggg 10243598  T
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacagg 507  Q
    |||||||| ||||| || |||||||| ||||||||||| || || ||||||||||||||    
10243597 ggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacagg 10243539  T

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Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 368 - 573
Target Start/End: Complemental strand, 10254619 - 10254414
Alignment:
368 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct 467  Q
    ||||||||||| | ||| ||||| ||||| | ||| || |||||||| || |||||||| || ||||| || |  || || |||||||||||||| ||||    
10254619 actggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggct 10254520  T
468 tgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    ||||| | || ||||| |  ||||| |||||||| |||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
10254519 tgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacagg 10254420  T
568 aggttt 573  Q
     |||||    
10254419 tggttt 10254414  T

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Target: chr4; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 371 - 561
Target Start/End: Complemental strand, 10217785 - 10217595
Alignment:
371 ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgt 470  Q
    ||||||||||| || |||||||| |  ||||| || || | |||||| || ||||| || ||||||||||| || ||||||||||| || ||||| ||||    
10217785 ggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgt 10217686  T
471 aaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgta 561  Q
    | || || || || | |||||| |||||||| |||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||    
10217685 agaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgta 10217595  T

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Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 428 - 561
Target Start/End: Complemental strand, 10217368 - 10217235
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    |||||||| |||||||||||||||||||||||||| |||||||| || ||||| || |  || || ||||||||||||||||||||| |||| ||||| |    
10217368 acaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggcttctctacaggtggtt 10217269  T
528 tgtaaactggaggcttctcaactggtggcttgta 561  Q
    |||| || |||||||| |||||||||||||||||    
10217268 tgtagaccggaggcttttcaactggtggcttgta 10217235  T

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Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 382 - 573
Target Start/End: Complemental strand, 10254575 - 10254384
Alignment:
382 aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggc 481  Q
    ||||||||||||||| ||||| |||||||| || || ||||| | ||| |||||||||||  | ||||||||||||||||| |||||||| || |||||     
10254575 aaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggt 10254476  T
482 ttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 573  Q
    || |  ||||| ||||||||||  || |||||| | |||||||||||||| || || || ||||| ||||||||||| ||||| || |||||    
10254475 ttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggtttctctactggtggcttataaaccgggggttt 10254384  T

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Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 573
Target Start/End: Complemental strand, 10254661 - 10254474
Alignment:
386 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 485  Q
    |||||||||||||| || ||||||||||| || |||||||| || || ||||| |  || || || || | || ||| ||||| | ||| ||||||||||    
10254661 ggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgt 10254562  T
486 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 573  Q
    | ||||| || || |  |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
10254561 acactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggttt 10254474  T

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Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 428 - 561
Target Start/End: Complemental strand, 10217278 - 10217145
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| || ||||| || |  ||||| |||||||||||||| |||||| |||| || || |    
10217278 acaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggcttctctacaggaggtt 10217179  T
528 tgtaaactggaggcttctcaactggtggcttgta 561  Q
    |||| || || |||||||||||||||||||||||    
10217178 tgtagacggggggcttctcaactggtggcttgta 10217145  T

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Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 428 - 561
Target Start/End: Complemental strand, 10217458 - 10217325
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    ||||| || ||||||||||| |||||||||||||| |||||||| || ||||| || |  || || ||||| ||||||||||||||| |||| ||||| |    
10217458 acagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggcttctctacaggtggtt 10217359  T
528 tgtaaactggaggcttctcaactggtggcttgta 561  Q
    |||| || ||||||||||||||||||||||||||    
10217358 tgtagaccggaggcttctcaactggtggcttgta 10217325  T

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Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 582
Target Start/End: Complemental strand, 10243912 - 10243779
Alignment:
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 548  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| || | ||| || |||||    || ||||||||||| || |||||||||||||    
10243912 ggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaa 10243813  T
549 ctggtggcttgtaaacaggaggtttgtagactgg 582  Q
    |||| ||||||||||| || || |||||||||||    
10243812 ctggaggcttgtaaacgggtggcttgtagactgg 10243779  T

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Target: chr4; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 434 - 570
Target Start/End: Complemental strand, 10217842 - 10217706
Alignment:
434 ggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaa 533  Q
    |||||||| ||||| ||||| | ||||||||| || | ||| || || |||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
10217842 ggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggcttctctactggtggcttgtaaa 10217743  T
534 ctggaggcttctcaactggtggcttgtaaacaggagg 570  Q
    ||||||| || |  || |||||||||||||| |||||    
10217742 ctggaggtttgtacaccggtggcttgtaaactggagg 10217706  T

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Target: chr4; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 356 - 564
Target Start/End: Complemental strand, 10264924 - 10264716
Alignment:
356 ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct 455  Q
    ||||||||||| ||| |||| |||| ||| || ||||| |  ||||||||||| | |||||||||||| | ||| ||||||||||| |||||||| ||||    
10264924 ggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttct 10264825  T
456 caactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtgg 555  Q
    | || || ||||||||||| ||| |||| |  ||||| |||||||  |||||||| ||  | |||||||||||||  ||| |||||||||| ||||| ||    
10264824 ctacaggtggcttgtaaacaggtagcttctcaactggtggcttgtgtacaggtggtttatcaactggtggcttgtgcactagaggcttctctactggagg 10264725  T
556 cttgtaaac 564  Q
     ||||||||    
10264724 tttgtaaac 10264716  T

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Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 613
Target Start/End: Complemental strand, 10217863 - 10217648
Alignment:
398 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 497  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||||||||| || ||||| || || |||||||| || || ||||    
10217863 actggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggct 10217764  T
498 tgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgg 597  Q
    | |  || ||||||||    ||||| || ||||| || || ||||| | |||||| ||||| |  ||||||||||||||||| ||||||||| | |||||    
10217763 tctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgg 10217664  T
598 gggtttgtacacaggt 613  Q
    ||| ||||||||||||    
10217663 gggcttgtacacaggt 10217648  T

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Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 570
Target Start/End: Complemental strand, 10217770 - 10217556
Alignment:
356 ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct 455  Q
    ||||||||||| ||||| ||||||||||| || || ||||| || || || || | |||||| ||||| |  ||||| || ||||||||||| || ||||    
10217770 ggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttct 10217671  T
456 caactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtgg 555  Q
    | ||||| |||||||| || |||||||| |  ||||| ||||| ||||| || |||||| | || ||||||||||| ||||| || ||||| ||||||||    
10217670 cgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtgg 10217571  T
556 cttgtaaacaggagg 570  Q
    |||||| | ||||||    
10217570 cttgtagataggagg 10217556  T

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Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 606
Target Start/End: Complemental strand, 10254331 - 10254171
Alignment:
446 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 545  Q
    |||||||| || || || |||||||| || |||||||| |  || || |||||||| || ||||||||  |||| ||||||||||| |||||||| ||||    
10254331 ggaggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggaggtttct 10254232  T
546 caactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 606  Q
    ||||||| ||||||||||||||||||| ||| || || |||||| ||||||| || |||||    
10254231 caactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgta 10254171  T

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Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 606
Target Start/End: Complemental strand, 10243918 - 10243695
Alignment:
398 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagac-------- 489  Q
    ||||| || ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||            
10243918 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct 10243819  T
490 -------tggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgg 582  Q
           ||||||||||||||| ||||||||    ||||| |||||||| || || |||||| | |||||||||||||| || || || ||||| || ||    
10243818 tctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgtagactgggggcttgtaaacagg 10243719  T
583 gggtttcactactgggggtttgta 606  Q
     || ||||||||||| || |||||    
10243718 tggcttcactactggtggcttgta 10243695  T

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Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 543
Target Start/End: Complemental strand, 10254256 - 10254099
Alignment:
386 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 485  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||| ||||| ||||| ||||||||||  || ||||| |    
10254256 ggtggcttgtacactggaggtttctcaactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaattggaggcttct 10254157  T
486 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggctt 543  Q
      ||||| ||||| || || || || | | |||||||||| ||||| || ||||||||    
10254156 ctactggtggcttatagacgggaggttgctctactggtggtttgtatacaggaggctt 10254099  T

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Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 558
Target Start/End: Complemental strand, 10243633 - 10243443
Alignment:
368 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct 467  Q
    ||||| || ||||| || ||||||||||| ||||| || ||||| ||||| || |||||||| ||||||||||| ||||| ||||| | ||| ||||| |    
10243633 actgggggtttgtatacaggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacaggaggtt 10243534  T
468 tgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggctt 558  Q
    |||| || || || ||    ||||| || ||||| |||||||||||    || ||||| |||||||||||||||||||| |||||||||||    
10243533 tgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggaggcttctctactggtggctt 10243443  T

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Target: chr4; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 572
Target Start/End: Complemental strand, 10254316 - 10254130
Alignment:
386 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 485  Q
    ||||||||||| ||||| || || || || || |||||||| || |||||||| |  || || ||||| |  |||||||| || | ||| || |||||||    
10254316 ggtggcttgtacactggtggcttttctacaggtggcttgtacactggtggcttttctacaggtggcttgtacactggaggtttctcaactgggggcttgt 10254217  T
486 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtt 572  Q
    | || ||||| | ||||||||| || ||| |||||||||||||||||| |||||||||||| ||||||||||| || || |||||||    
10254216 aaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaattggaggcttctctactggtggcttatagacgggaggtt 10254130  T

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Target: chr4; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 451 - 573
Target Start/End: Complemental strand, 10264949 - 10264827
Alignment:
451 cttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaact 550  Q
    |||||||||||| |||||||| || |||||||| |  ||| |||| |||| ||| || |||||| ||||||| || |||| |||||| ||||||||||||    
10264949 cttctcaactggtggcttgtatacaggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaact 10264850  T
551 ggtggcttgtaaacaggaggttt 573  Q
    ||||||||||| || ||||||||    
10264849 ggtggcttgtacaccggaggttt 10264827  T

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Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 349 - 498
Target Start/End: Complemental strand, 10243577 - 10243428
Alignment:
349 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 448  Q
    ||||||||||||||| |  || || ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| |||||     
10243577 gtaaactggtggcttgtacaccggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggt 10243478  T
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggctt 498  Q
    || || | |||||||||||| |  || |||||||| || ||||| |||||    
10243477 ggtttgtaaactggaggcttctctactggtggcttatatactggtggctt 10243428  T

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Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 10254706 - 10254589
Alignment:
446 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 545  Q
    ||||| ||||||| ||| ||||||||||| ||||| || |  || || |||||||| |||||||| ||| | || ||||||||||| |||||||||||||    
10254706 ggaggtttctcaaatggtggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttct 10254607  T
546 caactggtggcttgtaaa 563  Q
    |||||||||| |||||||    
10254606 caactggtggtttgtaaa 10254589  T

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Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 573
Target Start/End: Complemental strand, 10217323 - 10217103
Alignment:
353 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct 452  Q
    |||||||| ||||| || || ||||||||||| |||||||| |  || || ||||| |  || || ||||| | ||| ||||||||||| || || || |    
10217323 actggtggtttctctacaggtggcttgtaaacaggtggcttctctacaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtggtt 10217224  T
453 tctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactgg 552  Q
    |||| ||||| ||||||||||| || ||||| |  || ||||| ||||| || || |||||| | |||||||||||||| ||||| || ||||| || ||    
10217223 tctctactggtggcttgtaaacaggaggcttctctacaggaggtttgtagacggggggcttctcaactggtggcttgtacactggtggtttctctaccgg 10217124  T
553 tggcttgtaaacaggaggttt 573  Q
    ||| |||||||| ||||||||    
10217123 tggtttgtaaactggaggttt 10217103  T

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Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 570
Target Start/End: Complemental strand, 10217674 - 10217466
Alignment:
362 ttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactg 461  Q
    ||||||||||| |||||||| || |||||||| |  ||||| || || | |||||| ||||| | ||||||||||||||| || || || ||||| ||||    
10217674 ttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactg 10217575  T
462 gaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgta 561  Q
    | |||||||| |  || ||||| |  || || || ||||| || || || ||| | |||||||||||||| ||||| || ||||| ||||||||||||||    
10217574 gtggcttgtagataggaggcttctcaacagggggtttgtagaccgggggtttctcaactggtggcttgtacactggcggtttctctactggtggcttgta 10217475  T
562 aacaggagg 570  Q
     ||||||||    
10217474 gacaggagg 10217466  T

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Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 427 - 561
Target Start/End: Complemental strand, 10217549 - 10217415
Alignment:
427 aacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggc 526  Q
    |||||| || ||||||||||| || ||||||||||| |||||||| || || || || |  ||||| |||||||| ||||| |||||| |||| || ||     
10217549 aacagggggtttgtagaccgggggtttctcaactggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggcttctctacagggggt 10217450  T
527 ttgtaaactggaggcttctcaactggtggcttgta 561  Q
    ||||| || || |||||||||||||||||||||||    
10217449 ttgtagaccgggggcttctcaactggtggcttgta 10217415  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 563
Target Start/End: Complemental strand, 10254635 - 10254454
Alignment:
382 aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggc 481  Q
    ||||||||||||||| |||||||| ||||||||||| || |||||||  || ||||| |  ||||| ||||| |  ||||| || || |  || ||||||    
10254635 aaccggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggc 10254536  T
482 ttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaa 563  Q
    || |  ||||| ||||||||| | || |||||| | |||||||||||||| || || || ||||| ||||||||||||||||    
10254535 ttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaa 10254454  T

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Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 431 - 567
Target Start/End: Complemental strand, 10217215 - 10217079
Alignment:
431 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 530  Q
    ||||||||||| || ||||||||||| || ||||| ||||| ||||| ||||| |  ||||| |||||||| || ||||| ||| |||| ||||| ||||    
10217215 ggtggcttgtaaacaggaggcttctctacaggaggtttgtagacggggggcttctcaactggtggcttgtacactggtggtttctctaccggtggtttgt 10217116  T
531 aaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    |||||||||| || || || |||||||| || |||||    
10217115 aaactggaggtttttctaccggtggcttatacacagg 10217079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 10264732 - 10264620
Alignment:
398 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct 497  Q
    ||||||||||| | |||||||||||| | ||||||||||||||| |||||||| ||||| || || ||||||||||| ||| |||| |  ||||| ||||    
10264732 actggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttctcaactggtggct 10264633  T
498 tgtaaacaggtgg 510  Q
    |||  ||||||||    
10264632 tgtgtacaggtgg 10264620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 431 - 567
Target Start/End: Complemental strand, 10264939 - 10264803
Alignment:
431 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 530  Q
    ||||||||||| || || |||||||| ||| |||| |||| ||| || ||||| |  |||||||| |||| ||| || |||||| | |||||||||||||    
10264939 ggtggcttgtatacaggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgt 10264840  T
531 aaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    | || ||||| ||||| || |||||||||||||||||    
10264839 acaccggaggtttctctacaggtggcttgtaaacagg 10264803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 561
Target Start/End: Complemental strand, 10254513 - 10254366
Alignment:
414 ctgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggctt 513  Q
    |||| ||||| | ||| ||||||||||| || || || ||||| ||||| ||||||||||  || ||||| |  ||||| |||||||| |||||||| ||    
10254513 ctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggttt 10254414  T
514 cactactggtggcttgtaaactggaggcttctcaactggtggcttgta 561  Q
    | ||||||||||||| ||||| || || |||||||| ||||| |||||    
10254413 ctctactggtggcttataaaccgggggtttctcaacgggtggtttgta 10254366  T

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Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 573
Target Start/End: Complemental strand, 10264894 - 10264767
Alignment:
446 ggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttct 545  Q
    ||||||||||| |||||||| |||| ||| || ||||| |  ||||| |||||||| || || || ||| |||| |||||||||||||| ||  ||||||    
10264894 ggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttct 10264795  T
546 caactggtggcttgtaaacaggaggttt 573  Q
    |||||||||||||||  ||||| |||||    
10264794 caactggtggcttgtgtacaggtggttt 10264767  T

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Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 573
Target Start/End: Complemental strand, 10264743 - 10264617
Alignment:
447 gaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctc 546  Q
    |||||||||| |||||||| |||||||| || ||||| |  || || |||||||| || || || ||| |||| |||||||||||||| ||  |||||||    
10264743 gaggcttctctactggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagcttctc 10264644  T
547 aactggtggcttgtaaacaggaggttt 573  Q
    ||||||||||||||  ||||| |||||    
10264643 aactggtggcttgtgtacaggtggttt 10264617  T

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Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 561
Target Start/End: Complemental strand, 10217717 - 10217505
Alignment:
349 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 448  Q
    ||||||||| |||||||| || ||||| ||||| ||||| || || | |||||| || || |  || || ||||| | ||| |||||||| || || |||    
10217717 gtaaactggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactgga 10217618  T
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 548  Q
    ||||||||||| || |||||||| || ||||| || |  ||||| |||||||| | ||| |||||| | || || || ||||| || || || |||||||    
10217617 ggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgtagataggaggcttctcaacagggggtttgtagaccgggggtttctcaa 10217518  T
549 ctggtggcttgta 561  Q
    |||||||||||||    
10217517 ctggtggcttgta 10217505  T

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Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 419 - 543
Target Start/End: Complemental strand, 10243552 - 10243428
Alignment:
419 ggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcacta 518  Q
    |||||||||||||| || |||||||| || || ||| | ||||| || ||||| || ||||||||||| || || || |||||||| || |||||| |||    
10243552 ggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggtggtttgtaaactggaggcttctcta 10243453  T
519 ctggtggcttgtaaactggaggctt 543  Q
    |||||||||| || ||||| |||||    
10243452 ctggtggcttatatactggtggctt 10243428  T

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Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 613
Target Start/End: Complemental strand, 10243922 - 10243838
Alignment:
529 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggt 613  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| ||||||    
10243922 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggt 10243838  T

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Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 567
Target Start/End: Complemental strand, 10217440 - 10217289
Alignment:
416 gggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttca 515  Q
    |||||||| | ||| ||||||||||| || || || ||||| || || ||||| ||||| |||||||| |  || || || ||||| || || ||||||     
10217440 gggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggcttctctacaggtggtttgtagaccggaggcttct 10217341  T
516 ctactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    | |||||||||||||| ||||| || ||||| || |||||||||||||||||    
10217340 caactggtggcttgtacactggtggtttctctacaggtggcttgtaaacagg 10217289  T

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Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 431 - 570
Target Start/End: Complemental strand, 10217485 - 10217346
Alignment:
431 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 530  Q
    |||||||||||||| ||||||||||| || || || ||||| || || ||||| |  ||||| |||||||| || ||||| ||| |||| |||||||| |    
10217485 ggtggcttgtagacaggaggcttctctacagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttat 10217386  T
531 aaactggaggcttctcaactggtggcttgtaaacaggagg 570  Q
    |||| || |||||||| || ||||| ||||| || |||||    
10217385 aaacaggtggcttctctacaggtggtttgtagaccggagg 10217346  T

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Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 606
Target Start/End: Complemental strand, 10243922 - 10243740
Alignment:
424 gtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggt 523  Q
    |||||| |||||||| | ||| |||||||| | ||| || |||||||| || || || || |  ||||| ||||||||||||||||||||    || ||     
10243922 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 10243823  T
524 ggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 606  Q
    ||||| | |||||||||||| | ||| ||||||||||| || ||||| ||||| || || || ||||||||||| || |||||    
10243822 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgta 10243740  T

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Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 606
Target Start/End: Complemental strand, 10217867 - 10217790
Alignment:
529 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgta 606  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||| ||||| |||||| | ||||||||||||||    
10217867 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgta 10217790  T

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Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 438
Target Start/End: Complemental strand, 10217350 - 10217283
Alignment:
371 ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 438  Q
    |||||||| | ||| ||||||||||| ||||| |||||||| || || ||||||||||||||||||||    
10217350 ggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggctt 10217283  T

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Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 570
Target Start/End: Complemental strand, 10217398 - 10217256
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    ||||||||||| || || || |||||||| || || || ||||| || || ||||| |  ||||| |||||||| || ||||| ||| |||| |||||||    
10217398 acaggtggcttataaacaggtggcttctctacaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggct 10217299  T
528 tgtaaactggaggcttctcaactggtggcttgtaaacaggagg 570  Q
    ||||||| || |||||||| || ||||| ||||| || |||||    
10217298 tgtaaacaggtggcttctctacaggtggtttgtagaccggagg 10217256  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 10254559 - 10254477
Alignment:
353 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtgg 435  Q
    |||||||| ||||| || || ||||| | ||| |||||||||||  ||||||| ||||||||||| |||||||| ||||||||    
10254559 actggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtgg 10254477  T

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Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 558
Target Start/End: Complemental strand, 10254664 - 10254534
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    ||||||||||||||||| || || |||||||| || |||||||| || || ||||| |  ||||| || |||||||  || |||||| | || |||||||    
10254664 acaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggct 10254565  T
528 tgtaaactggaggcttctcaactggtggctt 558  Q
    |||| ||||| || ||||| || ||||||||    
10254564 tgtacactggtggtttctctacaggtggctt 10254534  T

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Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 563
Target Start/End: Complemental strand, 10265119 - 10264957
Alignment:
401 ggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgt 500  Q
    |||||||| | |||||||| ||| | ||| ||||||||||| |||||||| ||||   | || ||||||||||  ||| |||| |  ||||| |||||||    
10265119 ggaggtttgtaaactggggacttctcaactggtggcttgtacaccggaggtttctttgcaggtggcttgtaaaaaggtagcttctcaactggtggcttgt 10265020  T
501 aaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaa 563  Q
      |||||||| ||| | ||| |||||||||  |||||||||||||| ||| | || |||||||    
10265019 gtacaggtggtttctcaactcgtggcttgtgcactggaggcttctctactagaggtttgtaaa 10264957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 573
Target Start/End: Complemental strand, 10265254 - 10265157
Alignment:
476 ggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggttt 573  Q
    |||||| | |||| ||||||  ||||||  ||||||||| | | ||| ||||||| |||||| |||||||||| |||||||||||| ||||| |||||    
10265254 ggtggcatctagaatggaggtgtgtaaatcggtggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggttt 10265157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 567
Target Start/End: Complemental strand, 10217515 - 10217379
Alignment:
431 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 530  Q
    ||||||||||| || || || ||||| ||||| |||||||| || || ||||| |  || || || ||||| || || |||||| | |||||||||||||    
10217515 ggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggcttctctacagggggtttgtagaccgggggcttctcaactggtggcttgt 10217416  T
531 aaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    | ||||| || ||||| || |||||||| ||||||||    
10217415 acactggtggtttctctacaggtggcttataaacagg 10217379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 576
Target Start/End: Complemental strand, 10254184 - 10254096
Alignment:
488 actggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgta 576  Q
    ||||| ||||||||||  || |||||| ||||||||||||| || || ||||| | ||| |||||||| ||||| |||||||| |||||    
10254184 actggtggcttgtaaattggaggcttctctactggtggcttatagacgggaggttgctctactggtggtttgtatacaggaggcttgta 10254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 561
Target Start/End: Complemental strand, 10254518 - 10254306
Alignment:
349 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 448  Q
    |||| |||| |||||||| ||||| |||||||| || ||||| || |  ||||| || || | || ||||||||| | ||| ||||||||||| || ||     
10254518 gtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggt 10254419  T
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 548  Q
    || ||||| ||||| ||||| ||||| || || || |  || || || ||||| || ||||| ||| |||||||||| ||||| |  |||||||| || |    
10254418 ggtttctctactggtggcttataaaccgggggtttctcaacgggtggtttgtacactggtggtttctctactggtggtttgtatataggaggcttttcta 10254319  T
549 ctggtggcttgta 561  Q
    | |||||||||||    
10254318 caggtggcttgta 10254306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 10254688 - 10254612
Alignment:
494 ggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggagg 570  Q
    ||||||||||||||||| ||  |||| ||||||||||| || || || |||||||| ||||||||||| || |||||    
10254688 ggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggagg 10254612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 573
Target Start/End: Complemental strand, 10265191 - 10265067
Alignment:
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaa 548  Q
    |||||||||| ||| |||||||| || ||||| || |  || || |||||||  || || |||||| |||  || || ||||||||||| | ||||||||    
10265191 ggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgtgcactggaggcttctctaacggaggtttgtaaactggggacttctcaa 10265092  T
549 ctggtggcttgtaaacaggaggttt 573  Q
    ||||||||||||| || ||||||||    
10265091 ctggtggcttgtacaccggaggttt 10265067  T

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Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 570
Target Start/End: Complemental strand, 10254466 - 10254327
Alignment:
431 ggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgt 530  Q
    ||||||||||| |  || |||||||||||||| |||||||| || ||||| || |  ||||| ||||| ||||| || || ||| | || ||||| ||||    
10254466 ggtggcttgtaaattgggggcttctcaactggtggcttgtacacaggtggtttctctactggtggcttataaaccgggggtttctcaacgggtggtttgt 10254367  T
531 aaactggaggcttctcaactggtggcttgtaaacaggagg 570  Q
    | ||||| || ||||| |||||||| ||||| | ||||||    
10254366 acactggtggtttctctactggtggtttgtatataggagg 10254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 438
Target Start/End: Complemental strand, 10264717 - 10264647
Alignment:
368 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 438  Q
    ||||| ||||| | ||| ||||||||||| || ||||||||||| || || ||||||||||||||| ||||    
10264717 actgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt 10264647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 567
Target Start/End: Complemental strand, 10265061 - 10264923
Alignment:
429 caggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggctt 528  Q
    ||||||||||||| |  ||  ||||||||||||| |||||||  || ||||| || |  ||| | |||||||  || || |||||| ||||| | || ||    
10265061 caggtggcttgtaaaaaggtagcttctcaactggtggcttgtgtacaggtggtttctcaactcgtggcttgtgcactggaggcttctctactagaggttt 10264962  T
529 gtaaactggaggcttctcaactggtggcttgtaaacagg 567  Q
    ||||| ||||  ||||||||||||||||||||| |||||    
10264961 gtaaattggaaacttctcaactggtggcttgtatacagg 10264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 561
Target Start/End: Complemental strand, 10217188 - 10217055
Alignment:
428 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggct 527  Q
    ||||| || |||||||| || |||||||||||||| |||||||| || ||||| || |  || || || |||||||| || || ||  |||| |||||||    
10217188 acaggaggtttgtagacggggggcttctcaactggtggcttgtacactggtggtttctctaccggtggtttgtaaactggaggtttttctaccggtggct 10217089  T
528 tgtaaactggaggcttctcaactggtggcttgta 561  Q
    | || || || ||||||||||| || ||||||||    
10217088 tatacacaggtggcttctcaacagggggcttgta 10217055  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 10243414 - 10243349
Alignment:
392 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctca 457  Q
    |||||||| || |||||||||||||| ||||| || || ||||| | ||| |||||||||||||||    
10243414 ttgtagaccgggggtttctcaactggtggcttatacaccggtggttggtaaaccggaggcttctca 10243349  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 546
Target Start/End: Complemental strand, 10265221 - 10265124
Alignment:
449 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctc 546  Q
    |||||||| | ||||||||||| ||| || ||||| |  | ||| |||||||| |||||||| ||| | || ||||||||||  ||||||||||||||    
10265221 ggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgtgcactggaggcttctc 10265124  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 10217425 - 10217373
Alignment:
386 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 438  Q
    ||||||||||| ||||| |||||||| || || ||||| ||||||||||||||    
10217425 ggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggctt 10217373  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 10254530 - 10254454
Alignment:
352 aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaa 428  Q
    |||||||||||| |   |||||||||| | ||| ||||||||||| || || |||||||| ||||| ||||||||||    
10254530 aactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaa 10254454  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 562
Target Start/End: Complemental strand, 10254691 - 10254515
Alignment:
386 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 485  Q
    ||||||||||| || || || || || || || |||||||| |||||||| || |  ||||| ||||| |  ||||||||||| | ||| ||||| ||||    
10254691 ggtggcttgtaaacaggtggattttctacaggtggcttgtagacaggtggtttctcaaccggtggcttgtacactggaggcttctcaactggtggtttgt 10254592  T
486 agactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaa 562  Q
    | | ||| ||||| | ||| ||||||||    |||||||| || |  || || ||||||||||||||||||||||||    
10254591 aaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaa 10254515  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 560
Target Start/End: Complemental strand, 10265224 - 10265140
Alignment:
476 ggtggcttgtagactggaggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgt 560  Q
    |||||||| | || ||||||||||| ||| || |||||| | | |||||||||||| || || || |||||||| ||||||||||    
10265224 ggtggcttctcgaatggaggcttgtgaactgggggcttctcaattggtggcttgtatacaggtggtttctcaaccggtggcttgt 10265140  T

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