View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1228_low_22 (Length: 414)

Name: NF1228_low_22
Description: NF1228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1228_low_22
NF1228_low_22
[»] chr1 (45 HSPs)
chr1 (210-315)||(35772164-35772269)
chr1 (224-320)||(25713288-25713384)
chr1 (210-313)||(2859471-2859574)
chr1 (229-315)||(4112869-4112955)
chr1 (210-315)||(4112619-4112724)
chr1 (229-315)||(26177043-26177129)
chr1 (230-315)||(27413482-27413567)
chr1 (229-305)||(8870787-8870863)
chr1 (224-315)||(16163068-16163158)
chr1 (222-312)||(39348210-39348298)
chr1 (224-297)||(51459798-51459871)
chr1 (222-315)||(52961482-52961575)
chr1 (224-311)||(25145578-25145665)
chr1 (229-304)||(38733293-38733368)
chr1 (231-313)||(35892193-35892275)
chr1 (231-315)||(34264586-34264670)
chr1 (229-313)||(38668262-38668346)
chr1 (241-315)||(369766-369841)
chr1 (229-315)||(7307856-7307942)
chr1 (231-311)||(12325396-12325477)
chr1 (222-311)||(17412471-17412560)
chr1 (222-315)||(33156869-33156962)
chr1 (224-313)||(51459923-51460011)
chr1 (231-313)||(12376537-12376620)
chr1 (218-260)||(51589181-51589223)
chr1 (224-297)||(51460175-51460248)
chr1 (231-315)||(26173321-26173405)
chr1 (230-321)||(7653370-7653461)
chr1 (251-313)||(4098288-4098350)
chr1 (246-315)||(17208689-17208758)
chr1 (239-315)||(31496244-31496320)
chr1 (218-256)||(3169959-3169997)
chr1 (230-304)||(9499391-9499465)
chr1 (210-256)||(25137382-25137428)
chr1 (232-306)||(40189086-40189160)
chr1 (275-315)||(9146772-9146812)
chr1 (231-315)||(51460307-51460391)
chr1 (220-256)||(51589999-51590035)
chr1 (218-249)||(3169732-3169763)
chr1 (278-312)||(30369973-30370007)
chr1 (237-311)||(39100485-39100559)
chr1 (218-248)||(51588959-51588989)
chr1 (235-303)||(768971-769042)
chr1 (219-248)||(52127688-52127717)
chr1 (243-307)||(34076556-34076620)
[»] chr6 (32 HSPs)
chr6 (229-315)||(13353336-13353422)
chr6 (229-315)||(33796461-33796547)
chr6 (223-315)||(17147752-17147844)
chr6 (229-311)||(4868675-4868757)
chr6 (229-315)||(12330042-12330128)
chr6 (229-313)||(6400718-6400802)
chr6 (222-312)||(33494677-33494767)
chr6 (223-311)||(9705160-9705246)
chr6 (229-315)||(3680147-3680232)
chr6 (231-313)||(31961080-31961162)
chr6 (222-311)||(6542799-6542888)
chr6 (229-312)||(30505640-30505723)
chr6 (231-315)||(24554251-24554334)
chr6 (245-313)||(33631684-33631752)
chr6 (231-314)||(32290864-32290947)
chr6 (238-296)||(7638697-7638755)
chr6 (210-256)||(27772905-27772951)
chr6 (230-296)||(34345551-34345617)
chr6 (210-254)||(27656419-27656463)
chr6 (224-311)||(30256717-30256804)
chr6 (217-256)||(8026581-8026620)
chr6 (210-312)||(13740819-13740921)
chr6 (210-312)||(13746319-13746421)
chr6 (210-248)||(27653184-27653222)
chr6 (210-251)||(19712916-19712957)
chr6 (210-249)||(5572694-5572733)
chr6 (210-249)||(21690688-21690727)
chr6 (277-315)||(6237618-6237656)
chr6 (248-310)||(9496432-9496494)
chr6 (218-248)||(15600903-15600933)
chr6 (210-248)||(27772681-27772719)
chr6 (210-254)||(5572463-5572507)
[»] chr5 (47 HSPs)
chr5 (223-313)||(30770141-30770231)
chr5 (210-312)||(8081193-8081295)
chr5 (229-311)||(41666855-41666937)
chr5 (210-311)||(24269949-24270050)
chr5 (210-311)||(24346580-24346681)
chr5 (224-315)||(95359-95450)
chr5 (210-315)||(9368730-9368835)
chr5 (210-315)||(33337317-33337422)
chr5 (230-314)||(18885363-18885447)
chr5 (222-314)||(18333556-18333647)
chr5 (230-320)||(15590068-15590158)
chr5 (230-315)||(17352533-17352618)
chr5 (231-315)||(6919294-6919378)
chr5 (231-315)||(15480457-15480541)
chr5 (231-314)||(11896135-11896218)
chr5 (210-313)||(20510721-20510823)
chr5 (229-315)||(17015974-17016059)
chr5 (229-315)||(25258164-25258250)
chr5 (229-315)||(25321954-25322040)
chr5 (222-315)||(17150324-17150417)
chr5 (232-313)||(32908819-32908899)
chr5 (230-310)||(26137208-26137288)
chr5 (229-315)||(11896253-11896340)
chr5 (222-315)||(13700680-13700774)
chr5 (242-304)||(24531745-24531807)
chr5 (231-304)||(24528686-24528759)
chr5 (235-315)||(43117782-43117861)
chr5 (238-313)||(11896022-11896097)
chr5 (230-314)||(11896425-11896512)
chr5 (222-303)||(38731694-38731774)
chr5 (210-274)||(26245924-26245988)
chr5 (210-256)||(8098510-8098556)
chr5 (218-256)||(19522280-19522318)
chr5 (210-256)||(27133072-27133118)
chr5 (210-256)||(29909566-29909612)
chr5 (266-315)||(2062049-2062098)
chr5 (243-312)||(6415810-6415879)
chr5 (210-251)||(21209766-21209807)
chr5 (210-248)||(8098285-8098323)
chr5 (218-256)||(13296851-13296889)
chr5 (210-248)||(21210000-21210038)
chr5 (274-315)||(2985919-2985960)
chr5 (222-254)||(6637798-6637830)
chr5 (231-314)||(11896549-11896630)
chr5 (266-313)||(16704618-16704665)
chr5 (275-312)||(6413566-6413603)
chr5 (210-250)||(4481642-4481682)
[»] chr7 (50 HSPs)
chr7 (210-315)||(3519804-3519909)
chr7 (229-315)||(29469740-29469826)
chr7 (229-315)||(1596728-1596814)
chr7 (229-315)||(21861429-21861515)
chr7 (231-315)||(36277091-36277175)
chr7 (229-313)||(22574738-22574822)
chr7 (224-312)||(33834329-33834417)
chr7 (223-304)||(40746125-40746205)
chr7 (229-311)||(31892291-31892373)
chr7 (229-315)||(33996177-33996263)
chr7 (231-315)||(25620271-25620355)
chr7 (232-315)||(2315127-2315210)
chr7 (242-315)||(48661430-48661504)
chr7 (222-315)||(2404265-2404357)
chr7 (232-312)||(31485525-31485605)
chr7 (251-314)||(3519924-3519987)
chr7 (217-315)||(18826339-18826437)
chr7 (229-301)||(6001533-6001605)
chr7 (230-312)||(4886467-4886548)
chr7 (231-285)||(48243159-48243213)
chr7 (210-314)||(35308225-35308329)
chr7 (210-256)||(4268013-4268059)
chr7 (222-312)||(14540832-14540922)
chr7 (210-256)||(34027352-34027398)
chr7 (238-304)||(40898822-40898888)
chr7 (240-313)||(5871685-5871758)
chr7 (229-306)||(9688968-9689044)
chr7 (274-315)||(20305429-20305470)
chr7 (227-315)||(30727214-30727303)
chr7 (210-254)||(40746459-40746503)
chr7 (218-256)||(2544302-2544340)
chr7 (217-251)||(17202347-17202381)
chr7 (210-256)||(34027586-34027632)
chr7 (222-310)||(44874437-44874522)
chr7 (210-250)||(26562152-26562192)
chr7 (218-249)||(4267820-4267851)
chr7 (210-249)||(6634821-6634860)
chr7 (210-248)||(2544526-2544564)
chr7 (210-256)||(10882084-10882130)
chr7 (210-248)||(17202146-17202184)
chr7 (242-315)||(17948370-17948443)
chr7 (210-247)||(26029040-26029077)
chr7 (242-294)||(48660938-48660991)
chr7 (242-294)||(48661061-48661114)
chr7 (242-294)||(48661184-48661237)
chr7 (242-294)||(48661307-48661360)
chr7 (261-305)||(1936243-1936287)
chr7 (229-297)||(21821957-21822025)
chr7 (266-314)||(32292655-32292703)
chr7 (238-314)||(35308348-35308424)
[»] chr8 (55 HSPs)
chr8 (229-315)||(20301396-20301482)
chr8 (229-315)||(21088028-21088114)
chr8 (210-315)||(39052773-39052878)
chr8 (229-315)||(3157107-3157193)
chr8 (229-315)||(11232292-11232378)
chr8 (210-315)||(39052616-39052721)
chr8 (230-314)||(20094659-20094743)
chr8 (217-315)||(39960092-39960189)
chr8 (230-303)||(8084274-8084347)
chr8 (232-314)||(3157425-3157507)
chr8 (229-315)||(35682879-35682965)
chr8 (231-315)||(18004196-18004278)
chr8 (235-315)||(41790793-41790873)
chr8 (210-315)||(31197749-31197852)
chr8 (231-311)||(5932049-5932129)
chr8 (229-314)||(5675832-5675917)
chr8 (232-312)||(12688210-12688290)
chr8 (232-312)||(7669557-7669636)
chr8 (229-312)||(31079660-31079744)
chr8 (243-315)||(37867945-37868017)
chr8 (229-315)||(5589838-5589924)
chr8 (210-256)||(17477024-17477070)
chr8 (210-256)||(19256665-19256711)
chr8 (210-256)||(39743488-39743534)
chr8 (251-320)||(37868468-37868537)
chr8 (247-303)||(5675937-5675993)
chr8 (261-312)||(15797138-15797189)
chr8 (222-315)||(422308-422402)
chr8 (243-313)||(37868185-37868255)
chr8 (218-255)||(34843077-34843114)
chr8 (243-315)||(42049563-42049635)
chr8 (210-256)||(4828251-4828298)
chr8 (210-253)||(16050223-16050266)
chr8 (210-253)||(19472329-19472372)
chr8 (210-253)||(19543254-19543297)
chr8 (210-253)||(19589399-19589442)
chr8 (261-312)||(29005994-29006045)
chr8 (269-312)||(31079478-31079521)
chr8 (230-315)||(10615529-10615615)
chr8 (210-248)||(17469785-17469823)
chr8 (210-248)||(19256899-19256937)
chr8 (236-313)||(28213208-28213283)
chr8 (229-285)||(10615037-10615094)
chr8 (211-248)||(20702763-20702800)
chr8 (211-248)||(24075386-24075423)
chr8 (218-249)||(12547065-12547096)
chr8 (210-244)||(4828039-4828073)
chr8 (210-248)||(7267544-7267582)
chr8 (243-297)||(8849335-8849389)
chr8 (210-248)||(34842645-34842683)
chr8 (210-248)||(42846685-42846723)
chr8 (243-315)||(8716250-8716322)
chr8 (275-315)||(15042793-15042833)
chr8 (214-313)||(30201607-30201707)
chr8 (216-256)||(34842903-34842943)
[»] chr2 (39 HSPs)
chr2 (229-315)||(2029904-2029990)
chr2 (229-311)||(5711537-5711619)
chr2 (229-315)||(14466273-14466359)
chr2 (223-315)||(16419402-16419494)
chr2 (210-313)||(37812347-37812450)
chr2 (217-315)||(33606140-33606238)
chr2 (211-312)||(40379289-40379390)
chr2 (210-314)||(16533448-16533552)
chr2 (229-311)||(15124646-15124728)
chr2 (229-315)||(17525197-17525283)
chr2 (224-311)||(93215-93299)
chr2 (210-311)||(18607088-18607189)
chr2 (229-313)||(40149101-40149183)
chr2 (231-307)||(34515582-34515658)
chr2 (229-312)||(24396001-24396086)
chr2 (222-311)||(36352017-36352104)
chr2 (238-312)||(44404033-44404107)
chr2 (210-254)||(27036491-27036535)
chr2 (243-312)||(19981908-19981977)
chr2 (210-251)||(27897684-27897725)
chr2 (210-254)||(17854771-17854815)
chr2 (210-253)||(2324436-2324479)
chr2 (229-315)||(21383387-21383474)
chr2 (210-249)||(29718294-29718333)
chr2 (243-313)||(13250134-13250204)
chr2 (210-248)||(13486300-13486338)
chr2 (210-248)||(32884074-32884112)
chr2 (218-250)||(2324205-2324237)
chr2 (217-256)||(5509272-5509311)
chr2 (238-313)||(19110380-19110455)
chr2 (229-315)||(32356518-32356602)
chr2 (276-314)||(34893561-34893599)
chr2 (210-256)||(36316130-36316176)
chr2 (218-248)||(37770030-37770060)
chr2 (231-296)||(41069261-41069327)
chr2 (211-248)||(19191690-19191727)
chr2 (266-315)||(31001883-31001932)
chr2 (243-320)||(42895378-42895455)
chr2 (266-314)||(44529739-44529787)
[»] chr4 (47 HSPs)
chr4 (210-315)||(28245605-28245710)
chr4 (210-315)||(35796821-35796926)
chr4 (1-74)||(35818940-35819013)
chr4 (223-311)||(52559708-52559796)
chr4 (229-315)||(5398573-5398659)
chr4 (223-315)||(6778535-6778627)
chr4 (224-311)||(50543423-50543510)
chr4 (231-315)||(40717306-40717390)
chr4 (210-313)||(27634160-27634263)
chr4 (229-311)||(35788799-35788880)
chr4 (210-315)||(22231152-22231257)
chr4 (252-315)||(35819014-35819077)
chr4 (229-307)||(24974250-24974328)
chr4 (222-315)||(6218339-6218432)
chr4 (243-320)||(25324146-25324223)
chr4 (232-312)||(5398312-5398391)
chr4 (245-320)||(35645279-35645354)
chr4 (245-320)||(35645568-35645643)
chr4 (210-256)||(5846338-5846384)
chr4 (210-256)||(21498754-21498800)
chr4 (210-256)||(53828368-53828414)
chr4 (210-315)||(11036590-11036695)
chr4 (229-315)||(12005567-12005658)
chr4 (248-315)||(4645777-4645844)
chr4 (238-315)||(36686016-36686090)
chr4 (229-306)||(13555345-13555421)
chr4 (266-315)||(20726737-20726786)
chr4 (235-302)||(1215903-1215971)
chr4 (210-249)||(11103975-11104014)
chr4 (210-249)||(20821939-20821978)
chr4 (210-256)||(7806660-7806706)
chr4 (210-248)||(21498321-21498359)
chr4 (210-248)||(35819207-35819245)
chr4 (217-312)||(6666485-6666581)
chr4 (225-256)||(14783047-14783078)
chr4 (229-300)||(21750140-21750211)
chr4 (218-256)||(9685591-9685629)
chr4 (210-256)||(12869108-12869154)
chr4 (210-248)||(25052819-25052857)
chr4 (243-313)||(31945059-31945129)
chr4 (222-256)||(53814786-53814820)
chr4 (210-248)||(53815008-53815046)
chr4 (210-248)||(53828602-53828640)
chr4 (219-248)||(980138-980167)
chr4 (229-285)||(7926487-7926544)
chr4 (219-248)||(14783275-14783304)
chr4 (210-254)||(1518125-1518169)
[»] chr3 (36 HSPs)
chr3 (224-315)||(34992741-34992832)
chr3 (230-315)||(4155459-4155544)
chr3 (210-315)||(35038273-35038377)
chr3 (210-315)||(20327693-20327798)
chr3 (210-311)||(31317370-31317471)
chr3 (229-313)||(39683366-39683450)
chr3 (229-315)||(20303162-20303248)
chr3 (229-315)||(13574782-13574869)
chr3 (231-314)||(19954318-19954400)
chr3 (238-311)||(16239731-16239804)
chr3 (210-307)||(54368630-54368727)
chr3 (229-315)||(22729628-22729714)
chr3 (229-314)||(52724084-52724169)
chr3 (230-312)||(26753385-26753467)
chr3 (267-313)||(29575806-29575852)
chr3 (217-256)||(8018927-8018966)
chr3 (261-312)||(20303280-20303331)
chr3 (217-256)||(28087090-28087129)
chr3 (266-313)||(46139399-46139446)
chr3 (210-248)||(6487412-6487450)
chr3 (218-256)||(9273154-9273192)
chr3 (210-256)||(17638367-17638413)
chr3 (210-248)||(20327928-20327966)
chr3 (210-256)||(23691271-23691317)
chr3 (210-256)||(23708071-23708117)
chr3 (210-256)||(23726527-23726573)
chr3 (210-256)||(23744983-23745029)
chr3 (210-256)||(24063508-24063554)
chr3 (238-304)||(8142515-8142585)
chr3 (220-260)||(23607465-23607505)
chr3 (232-296)||(29215690-29215753)
chr3 (261-316)||(39269208-39269263)
chr3 (210-248)||(11589752-11589790)
chr3 (222-252)||(11589981-11590011)
chr3 (210-248)||(17638202-17638240)
chr3 (227-256)||(1722938-1722967)
[»] scaffold0519 (1 HSPs)
scaffold0519 (229-315)||(2051-2137)
[»] scaffold0729 (1 HSPs)
scaffold0729 (223-315)||(2629-2721)
[»] scaffold0048 (1 HSPs)
scaffold0048 (231-310)||(81981-82060)
[»] scaffold0692 (1 HSPs)
scaffold0692 (245-315)||(5633-5703)
[»] scaffold0047 (1 HSPs)
scaffold0047 (230-314)||(12783-12866)
[»] scaffold0366 (2 HSPs)
scaffold0366 (238-312)||(14543-14617)
scaffold0366 (238-312)||(10877-10951)
[»] scaffold0083 (1 HSPs)
scaffold0083 (243-312)||(51411-51480)
[»] scaffold0129 (1 HSPs)
scaffold0129 (224-315)||(14438-14529)
[»] scaffold0459 (1 HSPs)
scaffold0459 (238-312)||(13236-13310)
[»] scaffold0041 (1 HSPs)
scaffold0041 (238-304)||(67396-67462)
[»] scaffold0481 (2 HSPs)
scaffold0481 (210-249)||(3550-3589)
scaffold0481 (217-256)||(3323-3362)
[»] scaffold0092 (1 HSPs)
scaffold0092 (210-303)||(5802-5895)
[»] scaffold0005 (2 HSPs)
scaffold0005 (225-256)||(56652-56683)
scaffold0005 (219-248)||(56426-56455)
[»] scaffold0334 (1 HSPs)
scaffold0334 (210-254)||(4508-4552)


Alignment Details
Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 35772269 - 35772164
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| |||||| ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  35772269 ttgtcaggccatctcctatccgatgtgggactcttaacacacccgctcacaaccggcactattgggcttggttcgtggacataaatggtgggtggcccga 35772170  T
Q  310 tagcgg 315  Q
    ||||||    
T  35772169 tagcgg 35772164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 25713384 - 25713288
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    |||| ||||||||||||||||||||| |||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  25713384 cctatccgatgtgggactcttaacaccccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaact 25713288  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 2859471 - 2859574
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| ||||||||||||||||| ||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2859471 ttgtcaggccatcacctatccgatgtgggactcttatcaccccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccga 2859570  T
Q  310 tagc 313  Q
    ||||    
T  2859571 tagc 2859574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 4112869 - 4112955
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||| || |||||||    
T  4112869 ccgatgtgggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggtccaatagcgg 4112955  T

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Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 4112619 - 4112724
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||||||||  ||||  ||||||||||||||||||||| |||||| || |||| |||||||||||||||||||| ||||||||||||||||||  |||    
T  4112619 ttgtcatgccatgtcctgtccgatgtgggactcttaacaccccccctcacgaccaacactattgggcttggttcgttgacataaatggtgggtggttcga 4112718  T
Q  310 tagcgg 315  Q
    ||||||    
T  4112719 tagcgg 4112724  T

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Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 26177129 - 26177043
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||| | || |||||||||||||| |||||||||| || ||||||||||||||| ||||||||||    
T  26177129 ccgatgtgggactcttaacacaccccgtcacgaccagcactattggacttggttcgtggatataaatggtgggtggtccgatagcgg 26177043  T

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Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 27413567 - 27413482
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||| ||||||||||| || || |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  27413567 cgatgtgggacttttaacacaccctctcacgaccaacactattgggcttgattcgtggacataaatggtgggtggcccgatagcgg 27413482  T

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Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 8870787 - 8870863
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggc 305  Q
    |||||||||||||||||||||||||||| || |||||||| |||||| ||||||||| |||||||||||||||||||    
T  8870787 ccgatgtgggactcttaacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggtgggtggc 8870863  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 16163158 - 16163068
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| ||||||||||||||||||||||| |||| || ||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||    
T  16163158 cctatccgatgtgggactcttaacacacaccctcacgaccagcactat-gggcttggctcgtggacataaatggtaggtggcccgatagcgg 16163068  T

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Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 39348210 - 39348298
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||| ||||||||||||||||  |||||||| | || ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  39348210 ctcctatccgatgtgggactctt--cacaccccgtcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatag 39348298  T

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Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 51459798 - 51459871
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatgg 297  Q
    |||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  51459798 cctatccgatatgggactcttaacacaccccctcacgaccagcacaattgggcttggttcgtagacataaatgg 51459871  T

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Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 52961575 - 52961482
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| |||||||||||| ||||||||||||||| || || |||||||||| ||||| |||||  |||||| |||||||||||||||||||||    
T  52961575 ctcctatccgatgtgggacacttaacacaccccctcacgactagcactattgagcttgtttcgtgtacataactggtgggtggcccgatagcgg 52961482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 25145578 - 25145665
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||| |||||||| ||||||||||||||||||| || ||||||||||||| ||||| ||||| ||||| |||||||||||| ||||||    
T  25145578 cctatccgatgtgagactcttaacacaccccctcacgaccagcactattgagcttgattcgtggacattaatggtgggtggtccgata 25145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 38733368 - 38733293
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    |||||||||||||||||||||||| | | || |||||||||||||||||| ||||||||| |||||||||||||||    
T  38733368 ccgatgtgggactcttaacacacctcttcacgaccagcactattgggcttagttcgtagatataaatggtgggtgg 38733293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 35892275 - 35892193
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||||||||| || || |||||||| |||||||||  ||||| ||||||||||||||||| |||||||||    
T  35892275 gatgtgggactcttaacacaccctctcacgaccagcacaattgggcttaattcgtggacataaatggtgggtgccccgatagc 35892193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 34264586 - 34264670
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| || |||||||||||||||| || ||||||||||||| ||||||||||| || ||||||||||| || |||||||||||    
T  34264586 gatgtgagattcttaacacaccccctcacgaccagcactattgtgcttggttcgtcgatataaatggtggttgacccgatagcgg 34264670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 38668346 - 38668262
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||||||||||| || || ||||||| ||||||||||||||| | |||||||||| | |||| |||||||||    
T  38668346 ccgatgtgggactcttaacacacccactcacgaccagcaatattgggcttggttcatggacataaatgataggtgacccgatagc 38668262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 315
Target Start/End: Complemental strand, 369841 - 369766
Alignment:
Q  241 tcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtg-gcccgatagcgg 315  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  369841 tcttaacacatcccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgaccccgatagcgg 369766  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 7307942 - 7307856
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||| ||||||||| ||||||||| || |||| |||||||||  ||||||||| |||||||||||||||||| || |||||||    
T  7307942 ccgatgtgagactcttaatacaccccctcacgaccaacactattggatttggttcgtggacataaatggtgggtggtccaatagcgg 7307856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 12325396 - 12325477
Alignment:
Q  231 gatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||| ||||||| ||||||| |||| || |||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  12325396 gatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggtaggtggcccgata 12325477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 17412560 - 17412471
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||| | ||||||||||| |||||||||||| | || |||| |||||||||||||| ||||| |||||||||| |||||||| |||||    
T  17412560 ctcctatctgatgtgggacttttaacacaccccatcacgaccaacactattgggcttgattcgtggacataaatgatgggtggctcgata 17412471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 33156962 - 33156869
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| ||||||||| ||||||||||| |||||| || |    |||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  33156962 ctcctatccgatgtggaactcttaacacgccccctcacgattgacactattgggcttgattcgtggacataaatggtggatggcccgatagcgg 33156869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 51459923 - 51460011
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||| ||||||||||||||||||||||| |||| || |||||||| |||||| || |||||| |||||||||||||||| ||| ||||||    
T  51459923 cctatccgatgtgggactcttaacacacaccctcacgaccagcacaattggg-tttgttcgtggacataaatggtgggtcgcctgatagc 51460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 12376537 - 12376620
Alignment:
Q  231 gatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||| ||||||| ||||||| |||| || |||| |||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  12376537 gatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggtaggtggcctgatagc 12376620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 51589223 - 51589181
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacacccccttaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51589223 ccaactcctaaccgatgtgggactcttaacacacccccttaca 51589181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 51460175 - 51460248
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatgg 297  Q
    |||| |||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| | | |||||||||    
T  51460175 cctatccgatgtgggactcttaacacaccccctcacggccagcacaattgggcttggttcttgggcataaatgg 51460248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 26173321 - 26173405
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||| | || ||||| || |||||||| |||| |||| |||||| ||||||||||||||| || ||||||||||    
T  26173321 gatgtgggactcttagctcaacccctcacgaccagcacaattgagcttagttcgtggacataaatggtggggggtccgatagcgg 26173405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 321
Target Start/End: Complemental strand, 7653461 - 7653370
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaactg 321  Q
    ||||||||||| |||||||||| |||| || |||| |||||||| | |||||||||  ||||||||||||| || |||||||| || |||||    
T  7653461 cgatgtgggacgcttaacacactccctcacgaccaacactattgcgtttggttcgtgtacataaatggtggatgccccgatagtggaaactg 7653370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 4098288 - 4098350
Alignment:
Q  251 cccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||| || |||| || ||||||||||||||||| |||||||| ||||||||||||||||||    
T  4098288 ccccctcacgaccaacattattgggcttggttcgtggacataaagggtgggtggcccgatagc 4098350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 17208758 - 17208689
Alignment:
Q  246 acacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||| ||  ||| ||||||||||||||||  || || ||||||||||||||||||||||||||    
T  17208758 acacaccccctcacgcccaacactattgggcttggtgggtggatataaatggtgggtggcccgatagcgg 17208689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 31496244 - 31496320
Alignment:
Q  239 actcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||| | || |||||||||| || ||||| || ||  ||||||||||||||||| ||||||||||    
T  31496244 actcttaacacaccccttcacgaccagcactactgagcttgattagtgcacataaatggtgggtggtccgatagcgg 31496320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 3169997 - 3169959
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3169997 ccaactcctaaccgatgtgggactcttaacacacaccct 3169959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 9499465 - 9499391
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    ||||||| ||||||||||||||||| | ||||||| ||| || |||  |||||||| |||| |||||||||||||    
T  9499465 cgatgtgagactcttaacacaccccttcacaaccaacaccatcgggtatggttcgtggacaaaaatggtgggtgg 9499391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 25137382 - 25137428
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  25137382 ttgtcaggccaactcctaaccgatgtgggactcttaacgcacaccct 25137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 40189086 - 40189160
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcc 306  Q
    |||||| ||||| ||||||| |||| ||| ||| |||||||||||||||| ||| || ||||||||||| |||||    
T  40189086 atgtggaactctcaacacacaccctcacatccaacactattgggcttggtgcgtggatataaatggtggatggcc 40189160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 9146772 - 9146812
Alignment:
Q  275 gcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  9146772 gcttggttcgtggacataaatggtgggtgacccgatagcgg 9146812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 51460307 - 51460391
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||   || || || ||||| |||| | ||||||||| |||| ||||||||||| ||||||||||||    
T  51460307 gatgttggactcttaacacacatactcacgactagcacaattgagtttggttcgtggacacaaatggtgggtcgcccgatagcgg 51460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 51590035 - 51589999
Alignment:
Q  220 aactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||| ||||||||||||||||||||||||||    
T  51590035 aactcctaactgatgtgggactcttaacacaccccct 51589999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 3169763 - 3169732
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacac 249  Q
    ||||||||||||||||||||||||||||||||    
T  3169763 ccaactcctaaccgatgtgggactcttaacac 3169732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 30370007 - 30369973
Alignment:
Q  278 tggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||| ||||||||||||||||||||||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatag 30369973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 39100559 - 39100485
Alignment:
Q  237 ggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    ||||||||||||| ||| || || |||||  |||||||| ||| ||||| ||||||||| ||||||| |||||||    
T  39100559 ggactcttaacaccccctctcacgaccagttctattgggtttgattcgtggacataaatagtgggtgacccgata 39100485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 51588989 - 51588959
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||||||||||||||||||||||||||||    
T  51588989 ccaactcctaaccgatgtgggactcttaaca 51588959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 769042 - 768971
Alignment:
Q  235 tgggactcttaacacaccc---ccttacaaccagcactattgggcttggttcgtagacataaatggtgggtg 303  Q
    |||||||||||||||||||   ||| || || |||||||||||  ||| ||||| |||||||||||||||||    
T  769042 tgggactcttaacacaccctcccctcacgactagcactattggatttgattcgtggacataaatggtgggtg 768971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 52127717 - 52127688
Alignment:
Q  219 caactcctaaccgatgtgggactcttaaca 248  Q
    ||||||||||||||||||||||||||||||    
T  52127717 caactcctaaccgatgtgggactcttaaca 52127688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 34076620 - 34076556
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggccc 307  Q
    ||||||||| |||  |||| ||||| |||  |||||||||||| ||||||||||||| |||||||    
T  34076620 ttaacacactcccccacaatcagcattatcaggcttggttcgtggacataaatggtgtgtggccc 34076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 13353422 - 13353336
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13353422 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcgg 13353336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 33796547 - 33796461
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33796547 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcgg 33796461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 17147752 - 17147844
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  17147752 tcctatccgatgtgggactcttaacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtgacctgatagcgg 17147844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 4868675 - 4868757
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4868675 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgata 4868757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 12330042 - 12330128
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||||||||||| ||||    
T  12330042 ccgatgtgggactcttaacacaccccctcacgaccagcataattgggcttggttcgtggacataaatggtgggtggcccgatggcgg 12330128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 6400718 - 6400802
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||| |||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6400718 ccgatgtgagactcttaacaccccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagc 6400802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 33494767 - 33494677
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||| ||||||||||||||||||||||||  || || |||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  33494767 ctcctatccgatgtgggactcttaacacaccaactcacgaccagcactattgggcttggttcgtgaacataaacggtgggtggcccgatag 33494677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 9705246 - 9705160
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||||  | |||||||||||||||||||||||||    
T  9705246 tcctatccgatgtgggactcttaacacaccccctcacgaccagcactattggacttggtt--tggacataaatggtgggtggcccgata 9705160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 3680232 - 3680147
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||||| || |||||||||||||| || |||||||||||    
T  3680232 ccgatgtgggactcttaacac-ccccctcacgaccaacactattgggcttggtttgtggacataaatggtggatgacccgatagcgg 3680147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 31961162 - 31961080
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||||||||||||||| ||||| || || || ||||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  31961162 gatgtgggactcttaacacatcccctcacgactagtactattgggcttggtccgtggacataaatggtggggggcacgatagc 31961080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 6542799 - 6542888
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||| |||||||| |||||||||||||| |||| || |||| |  |||||| |||||||||| ||||||||||||||||| |||||||    
T  6542799 ctcctatccgatgtgagactcttaacacacaccctcacgaccaacgatattggacttggttcgtggacataaatggtgggtgacccgata 6542888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 30505723 - 30505640
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||||||| |||||| |  |||| |||| ||||||||||||||||||||||||   |||||||| ||||||    
T  30505723 ccgatgtgggactcttaacaccccccctcatgaccatcactgttgggcttggttcgtagacataaagaatgggtggcacgatag 30505640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 24554334 - 24554251
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| |||||||||||||| |||  |||| ||||| ||||| ||||||||||| |||||||||||||||||| | ||||||||    
T  24554334 gatgtgtgactcttaacacactcccc-acaatcagcattattgagcttggttcgttgacataaatggtgggtggtctgatagcgg 24554251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 33631684 - 33631752
Alignment:
Q  245 aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||| ||||| || ||||||||||||| |||||||| || ||||||||||||||||| |||||||||    
T  33631684 aacacatcccctcacgaccagcactattgagcttggttagtggacataaatggtgggtgtcccgatagc 33631752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 32290947 - 32290864
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||||||||| ||||||||    || || ||||||| ||||||||||| || || ||||||||||||||||||||||||||||    
T  32290947 gatgtgggacttttaacacattgactcacgaccagcattattgggcttgatttgtggacataaatggtgggtggcccgatagcg 32290864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 7638697 - 7638755
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatg 296  Q
    ||||||||||||| ||| | || || |||||||||||||||||||||||||||||||||    
T  7638697 gactcttaacacagcccatcacgactagcactattgggcttggttcgtagacataaatg 7638755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 27772951 - 27772905
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  27772951 ttgtcaggccaactcctaaccgatgtgggactcttaacacacaccct 27772905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 34345617 - 34345551
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatg 296  Q
    ||||||||||||||||||||||||||| |  |||| |||||||| | ||||||||| ||||||||||    
T  34345617 cgatgtgggactcttaacacaccccctcatgaccaacactattgtgtttggttcgtggacataaatg 34345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 27656463 - 27656419
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  27656463 ttgtcaggccaactcctaaccgatgtgggactcttaacacccccc 27656419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 30256804 - 30256717
Alignment:
Q  224 cctaaccgatgtgggactcttaa-cacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||| |||||||||||||||||| |||||||| | || |||| |||| |||||||| |||||| ||||||||||| ||||||| |||||    
T  30256804 cctatccgatgtgggactcttaaacacaccccatcacgaccaacactgttgggcttagttcgtggacataaatgg-gggtggctcgata 30256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 8026620 - 8026581
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  8026620 gccaactcataaccgatgtgggactcttaacacaccccct 8026581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 13740921 - 13740819
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||||| | || ||||||||| |||||||| |||||| || || ||||| | |||||  ||||||| || || |||||| |||||||||||||    
T  13740921 ttgtcaggccaacacatatccgatgtggaactcttaatacaccctctcacgaccagtaatattgaacttggtttgtggatataaattgtgggtggcccga 13740822  T
Q  310 tag 312  Q
    |||    
T  13740821 tag 13740819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 13746421 - 13746319
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||||| | || ||||||||| |||||||| |||||| || || ||||| | |||||  ||||||| || || |||||| |||||||||||||    
T  13746421 ttgtcaggccaacacatatccgatgtggaactcttaatacaccctctcacgaccagtaatattgaacttggtttgtggatataaattgtgggtggcccga 13746322  T
Q  310 tag 312  Q
    |||    
T  13746321 tag 13746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 27653222 - 27653184
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  27653222 ttgtcaggccaactcctaaccgatgtgggactcttaaca 27653184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 19712957 - 19712916
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacac 251  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  19712957 ttgtcaggccaactcctaaccgatgtggaactcttaacacac 19712916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 5572694 - 5572733
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  5572694 ttgtcatgccaactcctaaacgatgtgggattcttaacac 5572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 21690727 - 21690688
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  21690727 ttgtcaggccaaatcctaaccgatgtgggactcttaacac 21690688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 6237618 - 6237656
Alignment:
Q  277 ttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  6237618 ttggttcgtggacataaatggtgggtggtccgatagcgg 6237656  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 9496494 - 9496432
Alignment:
Q  248 acacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgat 310  Q
    ||||||||| ||  ||| ||||||| |||||||| |||| | |||||||||||||||||||||    
T  9496494 acaccccctcacgcccaacactattaggcttggtgcgtatatataaatggtgggtggcccgat 9496432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 15600933 - 15600903
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||||||||||||||||||||||||||||    
T  15600933 ccaactcctaaccgatgtgggactcttaaca 15600903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 27772719 - 27772681
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  27772719 ttgtcaggccaactcctaaccgatgtgggaatcttaaca 27772681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 5572463 - 5572507
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| || ||||||||||||||||| |||| ||||||||||||    
T  5572463 ttgtcaggcaaactcctaaccgatgtgagacttttaacacacccc 5572507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 30770141 - 30770231
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  30770141 tcctatccgatgtgggactcttaacacaccccctcacaaccagcgctattgggcttggttcgtggacataaatggtgggtggcccgatagc 30770231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 8081193 - 8081295
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  8081193 ttgtcaggccatgtcctatccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccga 8081292  T
Q  310 tag 312  Q
    |||    
T  8081293 tag 8081295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 41666855 - 41666937
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41666855 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgata 41666937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 24269949 - 24270050
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24269949 ttgtcaggccatgtcctatccgatgtgggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccga 24270048  T
Q  310 ta 311  Q
    ||    
T  24270049 ta 24270050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 24346580 - 24346681
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24346580 ttgtcaggccatgtcctatccgatgtgggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccga 24346679  T
Q  310 ta 311  Q
    ||    
T  24346680 ta 24346681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 95359 - 95450
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  95359 cctatccgatgtgtgactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcgg 95450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 9368835 - 9368730
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||| |||||| ||||||||||| || |    
T  9368835 ttgtcatgccatctcctatccgatgtgggactcttaagacaccccctcacgaccagcactattgggtttggttcgtggacatacatggtgggtggtccaa 9368736  T
Q  310 tagcgg 315  Q
    ||||||    
T  9368735 tagcgg 9368730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 33337317 - 33337422
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| || ||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33337317 ttgtcaggccatcacctatccaatgtgggactcttaacacaccccctcatgaccagcactattgggcttggttcgtggacataaatggtgggtggcccga 33337416  T
Q  310 tagcgg 315  Q
    | ||||    
T  33337417 tggcgg 33337422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 18885447 - 18885363
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  18885447 cgatgtgggactcttaacacaccctctcacgaccagcactattgggcttggttcatagacataaatggtgggtggtccgatagcg 18885363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 18333556 - 18333647
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||| ||||||||||| |||||||||||||| | || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  18333556 ctcctatccgatgtgggattcttaacacacccc-tcacgaccagcactaatgggcttggttcgtggacataaatggtgggtggcccgatagcg 18333647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 15590158 - 15590068
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||| || |||||||||||| ||||    
T  15590158 cgatgtgagactcttaacacaccccctcacgaccagcactattgggtttggttcgtggacataaatggtgagtagcccgatagcggaaact 15590068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 230 - 315
Target Start/End: Original strand, 17352533 - 17352618
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||||| ||| |||| ||| |||||||    
T  17352533 cgatgtgggactcttaacacacctccttacgaccagcattattgggcttggttcgtggacataaacggtaggtgacccaatagcgg 17352618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 6919294 - 6919378
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||||| || | || ||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||    
T  6919294 gatgtgggactcttaacacacaccatcacgaccagcactattgggcttggttcgtggacataaatggtgagtggtccgaaagcgg 6919378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 15480541 - 15480457
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||| ||| || |||||||| ||| |||||||||| | ||||||||||||||||||||| |||||||    
T  15480541 gatgtgggactcttaacacacctcctcacgaccagcacgattaggcttggttcatggacataaatggtgggtggcccaatagcgg 15480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 11896135 - 11896218
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||||||||||||| || | || | |||||||||||||||||| |||||||||||||||||  |||||||||    
T  11896135 gatgtgggactcttaacacaccccctcacgatcatccctattgggcttggttcgttgacataaatggtgggtgatccgatagcg 11896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 20510721 - 20510823
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| |||||||||| ||||||||||||||||| || | || |||||||||||||||||||| ||||||||||| ||||||||| |    
T  20510721 ttgtcaggccatcacctatccgatgtggggctcttaacacaccccctcacgatcatcactattgggcttggttcgtggacataaatgg-gggtggcccaa 20510819  T
Q  310 tagc 313  Q
    ||||    
T  20510820 tagc 20510823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 17015974 - 17016059
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||| ||| | || |||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  17015974 ccgatgtgggactcttaacacaaccc-tcacgaccaacactattggacttggttcgtggacataaatggtgggtggtccgatagcgg 17016059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 25258164 - 25258250
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| |  ||||||| |||| |||||||||||| ||||||||| |||||||| ||||||||||    
T  25258164 ccgatgtggaactcttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcgg 25258250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 25321954 - 25322040
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| |  ||||||| |||| |||||||||||| ||||||||| |||||||| ||||||||||    
T  25321954 ccgatgtggaactcttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcgg 25322040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 17150324 - 17150417
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| ||||||| | |||||||||||||||||| |||| || |||||||||  ||||||  | |||||||||||||||||||||||||||||    
T  17150324 ctcctatccgatgttgaactcttaacacaccccctcacaaacaacactattggtattggtttctggacataaatggtgggtggcccgatagcgg 17150417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 313
Target Start/End: Original strand, 32908819 - 32908899
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||| |||||||||||||||||| | || ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  32908819 atgtaggactcttaacacacccc-tcacgaccagcactattgggtttggttcgttgacataaatggtgggtgacccgatagc 32908899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 26137208 - 26137288
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgat 310  Q
    ||||||||||||||||| ||||||||| || || |||| |||||| |||||||||| |||||||||| |||||||||||||    
T  26137208 cgatgtgggactcttaatacaccccctcacgactagcattattggacttggttcgtggacataaatgatgggtggcccgat 26137288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 11896253 - 11896340
Alignment:
Q  229 ccgatgtgggactcttaacacacccc-cttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||| ||||||||||| || ||||||| ||||||  | |||||||||| |||||||||||||||||| ||||||||||    
T  11896253 ccgatgtgggactcctaacacacccctctcacaaccaacactatcagtcttggttcgtggacataaatggtgggtggtccgatagcgg 11896340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 13700680 - 13700774
Alignment:
Q  222 ctcctaaccgatg-tgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| |||||| ||||||||||||||||||  ||||| |||| |||||||||| |||||||||   |||||||||||||||||| ||||||||    
T  13700680 ctcctatccgatggtgggactcttaacacaccttcttacgaccaacactattgggtttggttcgtgatcataaatggtgggtggcctgatagcgg 13700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 24531807 - 24531745
Alignment:
Q  242 cttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    ||||||||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||    
T  24531807 cttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatgttgggtgg 24531745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 24528759 - 24528686
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    |||||||||||||||||||||||||| |  || ||||||||| |||||||||||| |||||||||| |||||||    
T  24528759 gatgtgggactcttaacacaccccctcatgacaagcactattaggcttggttcgtggacataaatgttgggtgg 24528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 43117861 - 43117782
Alignment:
Q  235 tgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||||||||| ||||||| ||||||||||    
T  43117861 tgggactcttaacac-ccccctcacgaccaacactattgagcttggttcgtggacataaatgatgggtggtccgatagcgg 43117782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 11896022 - 11896097
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||||| || |||| |||||||||| ||||||||  ||||||||||||||||||  |||||||    
T  11896022 gactcttaacacaccccctcacgaccatcactattgggtttggttcgcggacataaatggtgggtggttcgatagc 11896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 11896425 - 11896512
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagca---ctattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||||||||||||||||||||||| | || |||| ||   ||||||||||||||| || |||||||||| ||||||| |||||||||    
T  11896425 cgatgtgggactcttaacacaccccatcacgaccatcaggactattgggcttggtttgtggacataaatgttgggtggtccgatagcg 11896512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 38731694 - 38731774
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtg 303  Q
    |||||| ||||||||| || ||||||||||||| | || ||||||||||||||||||||||| | |||||||||| ||||||    
T  38731694 ctcctatccgatgtggaacacttaacacacccc-tcacgaccagcactattgggcttggttcatggacataaatgatgggtg 38731774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 26245988 - 26245924
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgg 274  Q
    |||||||| || |||||| |||||||||||||||||||||||||| | || ||||||||||||||    
T  26245988 ttgtcatgtcatctcctatccgatgtgggactcttaacacaccccttcacgaccagcactattgg 26245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 8098556 - 8098510
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8098556 ttgtcaggccaactcctaaccgatgtgggactcttaacaccccccct 8098510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 19522318 - 19522280
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19522318 ccaactcctaaccgatgtgggactcttaacacaccccct 19522280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 27133072 - 27133118
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||    
T  27133072 ttgtcaggccaactcctaaccgatgtgagactcttaacacaccccct 27133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 29909566 - 29909612
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  29909566 ttgtcaggccaactcctaaccgatgtcggactcttaacacaccccct 29909612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 2062049 - 2062098
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  2062049 cactattgggtttggttcgtggacataaatggtggatggcccgatagcgg 2062098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 6415879 - 6415810
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||  ||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||||||    
T  6415879 ttaacacacaacctcacaaccaacactattgggcttggttcgtggacataaacggtggatgacccgatag 6415810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 21209766 - 21209807
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacac 251  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  21209766 ttgtcaggccaactcctaaccgatgtgggactcttaacacac 21209807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 8098323 - 8098285
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  8098323 ttgtcaggccaactcctaaccgatgtgggactcttaaca 8098285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 13296889 - 13296851
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13296889 ccaactcctaaccgatgcgggactcttaacacaccccct 13296851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 21210000 - 21210038
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21210000 ttgtcaggccaactcctaaccgatgtgggactcttaaca 21210038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 2985919 - 2985960
Alignment:
Q  274 ggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  2985919 ggctttgttcgtggacataaatggtgggtggcccgatagcgg 2985960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 6637830 - 6637798
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||||||||||||||||||||||||||||||    
T  6637830 ctcctaaccgatgtgggactcttaacacacccc 6637798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 11896549 - 11896630
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||| |||| ||||||| | |||| ||||||| ||| ||||| |||||||||| ||||||  |||||||||| |||||||||    
T  11896549 gatgtgagacttttaacacgcaccctcacaaccaacacaattggacttggttcgtggacata--tggtgggtggtccgatagcg 11896630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 313
Target Start/End: Original strand, 16704618 - 16704665
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||||||||||||||| |||||||||| || ||| |||||||||    
T  16704618 cactattgggcttggttcgtggacataaatgatgagtgacccgatagc 16704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 6413566 - 6413603
Alignment:
Q  275 gcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  6413566 gcttggttcgtggacataaatggtgggtggctcgatag 6413603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 4481642 - 4481682
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacaca 250  Q
    |||||| ||||||| ||| ||||||||||||||||||||||    
T  4481642 ttgtcaggccaacttctatccgatgtgggactcttaacaca 4481682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 3519804 - 3519909
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  3519804 ttgtcaggccatcacctatccgatgtgggactcttaacacaccccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccga 3519903  T
Q  310 tagcgg 315  Q
    ||||||    
T  3519904 tagcgg 3519909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 29469826 - 29469740
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  29469826 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttgattcgtggacataaatggtgggtggcccgatagcgg 29469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 1596814 - 1596728
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||||||| | || || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1596814 ccgatgtgggactcttaacacacactctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcgg 1596728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 21861515 - 21861429
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  21861515 ccgatgtggaactcttaacacaccccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcgg 21861429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 36277091 - 36277175
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  36277091 gatgtgagactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcgg 36277175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 22574822 - 22574738
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||| ||||||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22574822 ccgatgtgagactcttaacacaccacctcacgaccaacactattgggcttggttcgtagacataaatggtgggtggtccgatagc 22574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 33834417 - 33834329
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||| ||||||||||||||||||| |||||| | || |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  33834417 cctatccgatgtgggactcttaacccaccccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatag 33834329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 40746125 - 40746205
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    ||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||    
T  40746125 tcctatccgatgtgggactcttaacacacccc-tcacgaccagcactattgggcttggttcgtggacataaatggtgggtgg 40746205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 31892373 - 31892291
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||| ||||||||||||||||||| || |||| || ||||||||||||||||| |||||||||||||||||||| ||||    
T  31892373 ccgatgtgagactcttaacacaccccctcacgaccatcattattgggcttggttcgtggacataaatggtgggtggcctgata 31892291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 33996177 - 33996263
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||| ||| |||| || | || |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33996177 ccgatgtgggactcttaactcacaccctcacgatcaacactattgggcttggttcgtggacataaatggtgggtggcccgattgcgg 33996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 25620355 - 25620271
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| ||||||||||||||| || | || |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  25620355 gatgtaggactcttaacacacaccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccaatagcgg 25620271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 2315127 - 2315210
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||| |||||| ||||||||| || |||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  2315127 atgtgggaatcttaatacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggtccgattgcgg 2315210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 48661430 - 48661504
Alignment:
Q  242 cttaacacacccccttac-aaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  48661430 cttaacacaccccctcacgaaccaacactattgggcttggttcgtggacataaatggtgggtggcccgaaagcgg 48661504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 2404265 - 2404357
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||||||||||||||||||||| || || || ||||||||||||| ||||||||||| |||||||| ||| ||||| || |||||||    
T  2404265 ctcctaaccgatgtgggactcttaacaca-cctctcacgaccagcactattgcgcttggttcgtggacataaacggtaggtggtccaatagcgg 2404357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 31485525 - 31485605
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||||||||||| || | || |||||||||| ||| ||||| || |||||||||||||||||||||||    
T  31485525 atgtgggactcttaacacaccccctcacgaacaacactattgggtttgattcgtggatataaatggtgggtggcccgatag 31485605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 3519924 - 3519987
Alignment:
Q  251 cccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3519924 ccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcg 3519987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 18826339 - 18826437
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| ||||||  ||||||| ||||||||||||| ||||| |  |||| ||| |||||||||||||||| | ||||||||||||||||| |||||||||    
T  18826339 gccatctcctattcgatgtgagactcttaacacatcccctcatgaccaacacaattgggcttggttcgtggtcataaatggtgggtggctcgatagcgg 18826437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 6001533 - 6001605
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtggg 301  Q
    ||||||||||||||||||||||| |||| || ||||||| |||| |||||||||||| || ||||||||||||    
T  6001533 ccgatgtgggactcttaacacactccctcacgaccagcattattaggcttggttcgtggaaataaatggtggg 6001605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 4886548 - 4886467
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||| ||||||||| |||  |||| || ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4886548 cgatgtgagactcttaa-acattccctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggctcgatag 4886467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 48243159 - 48243213
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgt 285  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  48243159 gatgtgggactcttaacacaccccctcacgaccagcactattgagcttggttcgt 48243213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 35308225 - 35308329
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||||| || |||||| | |||||| || ||||||||||| |  | || ||||||||||||||||||||||||| |||||||| ||||| || || ||    
T  35308225 ttgtcatgacatctcctatctgatgtgagattcttaacacactcattcacgaccagcactattgggcttggttcgtggacataaacggtggatgacctga 35308324  T
Q  310 tagcg 314  Q
    |||||    
T  35308325 tagcg 35308329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 4268059 - 4268013
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  4268059 ttgtcaggccaactcctaactgatgtgggactcttaacacaccccct 4268013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 14540832 - 14540922
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||| |||||||| || ||||||||||| |||| |  |||||||||||||||||||||| || ||||||||| | ||| | ||||||||    
T  14540832 ctcctatccgatgtgtgattcttaacacacaccctcatgaccagcactattgggcttggtttgtggacataaatagcgggcgacccgatag 14540922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 34027398 - 34027352
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  34027398 ttgtcaggccaactcctaaccgatgtgggattcttaacacaccccct 34027352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 40898822 - 40898888
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    |||||||||||||| || | ||| ||| |||||||| ||||||||||| ||||||||||||||||||    
T  40898822 gactcttaacacacaccgtcacagccaacactattgagcttggttcgtggacataaatggtgggtgg 40898888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 5871685 - 5871758
Alignment:
Q  240 ctcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||| ||||||||||| || ||||||||||||| | ||||||||| |||||||||||| ||| | ||||||||    
T  5871685 ctctttacacaccccctcacgaccagcactattgagtttggttcgttgacataaatggtaggtcgtccgatagc 5871758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 9688968 - 9689044
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcc 306  Q
    ||||||||| ||||||||||| |||||| || | || |||||||||||||||||||| | ||||||| ||||||||||    
T  9688968 ccgatgtggaactcttaacaccccccctcacgatcaacactattgggcttggttcgt-ggcataaatcgtgggtggcc 9689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 20305470 - 20305429
Alignment:
Q  274 ggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  20305470 ggcttggttcgtggacataaatggtgggtggcccgatagcgg 20305429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 30727214 - 30727303
Alignment:
Q  227 aaccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||  |||||| |||||||||||| ||  ||| ||||||||||||| ||| || || |||||||||||||||||| |||||||    
T  30727214 aaccgatgtgtcactctttaacacaccccctcacgcccaacactattgggcttagtttgtggatataaatggtgggtggcccaatagcgg 30727303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 40746503 - 40746459
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  40746503 ttgtcaggccaactcctaaccaatgtgggactcttaacacacccc 40746459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 2544302 - 2544340
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  2544302 ccaactcctaaccgatgtgggactcttaacaccccccct 2544340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 17202381 - 17202347
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacac 251  Q
    |||||||||||||||||||||||||||||||||||    
T  17202381 gccaactcctaaccgatgtgggactcttaacacac 17202347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 34027632 - 34027586
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  34027632 ttgtcaggccaacttctaactgatgtgggactcttaacacaccccct 34027586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 44874437 - 44874522
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgat 310  Q
    |||||| |||||||||||||||||||   |||||   | ||||| | ||||||| |||||||||||||||||||| |||||| ||||||    
T  44874437 ctcctatccgatgtgggactcttaac---ccccccggcgaccagtattattgggtttggttcgtagacataaatgatgggtgacccgat 44874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 26562152 - 26562192
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacaca 250  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  26562152 ttgtcaggccaactcctaaccgatgtgagactcttaacaca 26562192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 4267851 - 4267820
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacac 249  Q
    ||||||||||||||||||||||||||||||||    
T  4267851 ccaactcctaaccgatgtgggactcttaacac 4267820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 6634860 - 6634821
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  6634860 ttgtcaggccaactcctaaccgatgtgagactcttaacac 6634821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 2544526 - 2544564
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  2544526 ttgtcaggccaactcctaaccgacgtgggactcttaaca 2544564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 10882084 - 10882130
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||||    
T  10882084 ttgtcatgccaactccttatcaatgtgggactcttcacacaccccct 10882130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 17202184 - 17202146
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  17202184 ttgtcaggccaactcttaaccgatgtgggactcttaaca 17202146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 17948443 - 17948370
Alignment:
Q  242 cttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||| | | || || || |||||||||||||||| || |||| ||||||||||||| | ||||||||    
T  17948443 cttaacacaccacttcacgactagtactattgggcttggtttgtggacacaaatggtgggtggtctgatagcgg 17948370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 26029040 - 26029077
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaac 247  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  26029040 ttgtcaggccaactcctaaccgatgtaggactcttaac 26029077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 48660938 - 48660991
Alignment:
Q  242 cttaacacacccccttacaa-ccagcactattgggcttggttcgtagacataaa 294  Q
    ||||||||||||| | |||| ||| |||||||||||||||||||| ||||||||    
T  48660938 cttaacacaccccgtcacaaaccaacactattgggcttggttcgtggacataaa 48660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 48661061 - 48661114
Alignment:
Q  242 cttaacacacccccttac-aaccagcactattgggcttggttcgtagacataaa 294  Q
    |||||||||||||||  | ||||| |||||||||||||||||||| ||||||||    
T  48661061 cttaacacaccccctcgcgaaccaacactattgggcttggttcgtggacataaa 48661114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 48661184 - 48661237
Alignment:
Q  242 cttaacacacccccttac-aaccagcactattgggcttggttcgtagacataaa 294  Q
    |||||||||||||||  | ||||| |||||||||||||||||||| ||||||||    
T  48661184 cttaacacaccccctcgcgaaccaacactattgggcttggttcgtggacataaa 48661237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 48661307 - 48661360
Alignment:
Q  242 cttaacacacccccttac-aaccagcactattgggcttggttcgtagacataaa 294  Q
    |||||||||||||||  | ||||| |||||||||||||||||||| ||||||||    
T  48661307 cttaacacaccccctcgcgaaccaacactattgggcttggttcgtggacataaa 48661360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 1936243 - 1936287
Alignment:
Q  261 accagcactattgggcttggttcgtagacataaatggtgggtggc 305  Q
    |||| ||||||||||| |||||||| |||||||||||| ||||||    
T  1936243 accaacactattgggcatggttcgttgacataaatggtaggtggc 1936287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 21822025 - 21821957
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatgg 297  Q
    ||||||||| ||| |||||||||||||| || |||| |||||||  || |||||||| |||||| ||||    
T  21822025 ccgatgtggaactgttaacacaccccctcacgaccaacactattatgcctggttcgtggacatatatgg 21821957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 32292703 - 32292655
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||| ||| || ||| |||||||||| ||||||||||    
T  32292703 cactattgggcttggtgcgtggatatatatggtgggtgacccgatagcg 32292655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 35308348 - 35308424
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||| |||||||||||  | ||||||| || ||||||| ||||||||| |||||| | | |||||| ||||||||||    
T  35308348 gactgttaacacaccctatcacaaccaacattattgggtttggttcgtggacatagacgatgggtgacccgatagcg 35308424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 20301482 - 20301396
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20301482 ccgatgtggtactcttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcgg 20301396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 21088114 - 21088028
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21088114 ccgatgtggtactcttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcgg 21088028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 39052773 - 39052878
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| |||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |||||||||||||||||||| ||    
T  39052773 ttgtcaggccatcacctatccgatgtgggactcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccgga 39052872  T
Q  310 tagcgg 315  Q
    ||||||    
T  39052873 tagcgg 39052878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 3157107 - 3157193
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  3157107 ccgatgtgagactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgg 3157193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 11232292 - 11232378
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  11232292 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcgg 11232378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 39052616 - 39052721
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| | |||||||||||||||||||||||||| || |||| |||||||||||||||||||| |||||||||||||||||||| ||    
T  39052616 ttgtcaggccatcacctatctgatgtgggactcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccgga 39052715  T
Q  310 tagcgg 315  Q
    ||||||    
T  39052716 tagcgg 39052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 20094659 - 20094743
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20094659 cgatgtgggactcttaacacgccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgatagcg 20094743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 39960189 - 39960092
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| |||||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  39960189 gccatctcctatccgatgtgggactcttaacac-ccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtagctcgatagcgg 39960092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 8084347 - 8084274
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtg 303  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  8084347 cgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtg 8084274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 3157425 - 3157507
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||| |||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3157425 atgtgagactcttaacacacccactcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcg 3157507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 35682879 - 35682965
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||  ||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  35682879 ccgatgtggaactcttaacaccacccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgatagcgg 35682965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 18004196 - 18004278
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||  ||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  18004196 gatgtgggactcttaacac--cccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcgg 18004278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 41790873 - 41790793
Alignment:
Q  235 tgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||    
T  41790873 tgggactcttaacacaccccctcacgaccagcactcttgggcttggttcatggacataaatggtgggtggctcgatagcgg 41790793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 31197852 - 31197749
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| | |||||||||||||||||||  ||||| |||| ||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  31197852 ttgtcaggccatcacctatctgatgtgggactcttaacac--cccctcacaatcagcactattgagcttggttcgtggacataaatggtgggtggtccga 31197755  T
Q  310 tagcgg 315  Q
    ||||||    
T  31197754 tagcgg 31197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 5932049 - 5932129
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||||||||||||||||||  | || ||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  5932049 gatgtgggactcttaacacaccctttcacgaccagcactattgcgcttggtttgtcgacataaatggtgggtggcccgata 5932129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 5675832 - 5675917
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||||| |||||||| ||||||| |||  | |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  5675832 ccgatgtaggactctttacacacctcctctcgaccagcactattggacttggttcgtggacataaatggtgggtgacccgatagcg 5675917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 12688290 - 12688210
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||||||| |||||||||| |  |||| ||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  12688290 atgtgggactcttatcacaccccctcatgaccatcactattgggcttagttcgtggacataaatggtgggtggcccaatag 12688210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 7669636 - 7669557
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||| ||||||||||||| |||| || ||||||||||| | ||||||||||| |||||||||||||||||| |||||||    
T  7669636 atgtggaactcttaacacacaccctcacgaccagcactat-gagcttggttcgtggacataaatggtgggtggtccgatag 7669557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 31079660 - 31079744
Alignment:
Q  229 ccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||||||||| |||||||| ||| || |||| | |||||||||||||||||| |||||||||| ||| |||||||||||    
T  31079660 ccgatgtgggactctttaacacacctcctcacgaccatccctattgggcttggttcgtggacataaatgatggatggcccgatag 31079744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 37867945 - 37868017
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||| || |||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  37867945 ttaacacacaccctcacgaccaacactattggccttggttcgtggacataaatggtgggtggcccaatagcgg 37868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 5589838 - 5589924
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||| ||||||||||||||  | || || |||| ||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  5589838 ccgatgtgggcctcttaacacacccgttcacgactagcattattgggcttggttcgtggacataaattgtgggtgatccgatagcgg 5589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 17477070 - 17477024
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  17477070 ttgtcaggccaactcctaaccgatgtgggactcttaacacaccccct 17477024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 19256665 - 19256711
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19256665 ttgtcaggccaactcctaaccgatgtgggactcttaacacaccccct 19256711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 39743534 - 39743488
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  39743534 ttgtcaggccaactcctaaccgatgtgggactcttaacacaccccct 39743488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 37868468 - 37868537
Alignment:
Q  251 cccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    |||||| || ||||||| |||||||||||||||||  |||||||||||||||||||| ||||||| ||||    
T  37868468 ccccctcacgaccagcaatattgggcttggttcgtgtacataaatggtgggtggcccaatagcggaaact 37868537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 5675937 - 5675993
Alignment:
Q  247 cacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtg 303  Q
    |||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||    
T  5675937 cacacctcctcacgaccagcagtattgggcttggttcgtagacataaatggtgggtg 5675993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 15797138 - 15797189
Alignment:
Q  261 accagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  15797138 accagcactattgggcttggttcgtggacataaatggtggatgggccgatag 15797189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 422308 - 422402
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccc-cttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| ||||||||||||| |||||||||||| || |  |||| || |||||  |||||||||| |||| |||||||||||||||||| |||||    
T  422308 ctcctatccgatgtgggacttttaacacacccctctcatgaccaacattattgaacttggttcgtggacaaaaatggtgggtggcccgagagcgg 422402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 37868185 - 37868255
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||| |||| || |||| ||||||||||||||| |||| ||||||||||||||||| ||| |||||    
T  37868185 ttaacacacaccctcacgaccaacactattgggcttggctcgtggacataaatggtgggtgacccaatagc 37868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 34843114 - 34843077
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccc 255  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34843114 ccaactcctaaccgatgtgggactcttaacacaccccc 34843077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 42049563 - 42049635
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||| || | || ||||||||| |||||||||| ||||||||| ||||||||||  |||||||    
T  42049563 ttaacacaccccctcacgagcaacactattggacttggttcgtggacataaatagtgggtggcctaatagcgg 42049635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 4828298 - 4828251
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactc-ttaacacaccccct 256  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  4828298 ttgtcatgccaactcctaaccgatgtgggactctttaacacactccct 4828251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 16050266 - 16050223
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccc 253  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  16050266 ttgtcaggccaactcctaaccgatgtgagactcttaacacaccc 16050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19472329 - 19472372
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccc 253  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  19472329 ttgtcaggccaattcctaaccgatgtgggactcttaacacaccc 19472372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19543254 - 19543297
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccc 253  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  19543254 ttgtcaggccaattcctaaccgatgtgggactcttaacacaccc 19543297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 19589442 - 19589399
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccc 253  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  19589442 ttgtcaggccaattcctaaccgatgtgggactcttaacacaccc 19589399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 29006045 - 29005994
Alignment:
Q  261 accagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||||||||||| | || | ||||||||||||||||||||||||||    
T  29006045 accagcactattgggcttcgctcatggacataaatggtgggtggcccgatag 29005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 312
Target Start/End: Original strand, 31079478 - 31079521
Alignment:
Q  269 tattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  31079478 tattgggcttggttcgttcacataaatggtgggtggcccgatag 31079521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 10615615 - 10615529
Alignment:
Q  230 cgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| |||||||| ||||||| |||| || || ||||||||||| |||||||||| || |||||| || |||| |||||||||||    
T  10615615 cgatgtaggactctttaacacacaccctcacgactagcactattggacttggttcgtggagataaatagttggtgacccgatagcgg 10615529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 17469823 - 17469785
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  17469823 ttgtcaggccaactcctaaccgatgtgggactcttaaca 17469785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 19256899 - 19256937
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  19256899 ttgtcaggccaactcctaaccgatgtgggactcttaaca 19256937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 28213208 - 28213283
Alignment:
Q  236 gggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||| ||| |  || | |||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  28213208 gggactcttaacacaccacctcatgactaacactattgggcttgattcgtggacataaatg--gggtggcccgatagc 28213283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 10615037 - 10615094
Alignment:
Q  229 ccgatgtgggactc-ttaacacacccccttacaaccagcactattgggcttggttcgt 285  Q
    |||||||||||||| ||||||||| |||| ||||||| ||||||||| ||||||||||    
T  10615037 ccgatgtgggactctttaacacacaccctcacaaccaacactattggacttggttcgt 10615094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 20702800 - 20702763
Alignment:
Q  211 tgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20702800 tgtcaggccaactcctaaccgatgtgggactcttaaca 20702763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 24075386 - 24075423
Alignment:
Q  211 tgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24075386 tgtcaggccaactcctaaccgatgtgggactcttaaca 24075423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 12547096 - 12547065
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacac 249  Q
    ||||||||||||||||||||||||||||||||    
T  12547096 ccaactcctaaccgatgtgggactcttaacac 12547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 4828073 - 4828039
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactctt 244  Q
    |||||||| ||||||||||||||||||||||||||    
T  4828073 ttgtcatgtcaactcctaaccgatgtgggactctt 4828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 7267544 - 7267582
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  7267544 ttgtcaagccaactcctaaccgatgtgtgactcttaaca 7267582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 8849389 - 8849335
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatgg 297  Q
    |||||||||||||| || |||| |||||||||| ||||||| |||| ||||||||    
T  8849389 ttaacacaccccctcacgaccaacactattgggtttggttcatagatataaatgg 8849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 34842683 - 34842645
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  34842683 ttgtcaggccaactcctaactgatgtgggactcttaaca 34842645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 42846685 - 42846723
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  42846685 ttgtcaggccaactcctaaccgatgtgagactcttaaca 42846723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 8716322 - 8716250
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||| | |  ||||||| |||| || || |||||| |||||||||||| |||| |||||||||||    
T  8716322 ttaacacaccccgtcatgaccagcagtattaggttttgttcgtggacataaatggtcggtgacccgatagcgg 8716250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 15042793 - 15042833
Alignment:
Q  275 gcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||| |||||||| ||||||||||| ||||||||    
T  15042793 gcttggttcgtggacataaacggtgggtggcctgatagcgg 15042833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 313
Target Start/End: Original strand, 30201607 - 30201707
Alignment:
Q  214 catgccaactcctaaccgatgtgggactc-ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||| ||| || |||||||||||||| |||||||| || || |  |||| |||| ||||| |||||| || | |||||| |||||||| ||||||||    
T  30201607 catgccatctcttatccgatgtgggactctttaacacatcctctcatgaccatcactgttgggtttggtttgtggtcataaacggtgggtgacccgatag 30201706  T
Q  313 c 313  Q
    |    
T  30201707 c 30201707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 34842943 - 34842903
Alignment:
Q  216 tgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||| ||||||  |||||||||||||||||||    
T  34842943 tgccaactcctaaacgatgtaagactcttaacacaccccct 34842903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 2029990 - 2029904
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  2029990 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcgg 2029904  T

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Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 5711537 - 5711619
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5711537 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgata 5711619  T

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Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 14466273 - 14466359
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14466273 ccgatgtggaactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcgg 14466359  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 16419494 - 16419402
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  16419494 tcctatccgatgtgggactcttaacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggctcgatagcgg 16419402  T

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Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 37812347 - 37812450
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||  |||||||||||||    
T  37812347 ttgtcaggccatgtcctatccgatgtgggactcttaacacaccccctcacgaccagcattattgggcttggttcgtggacataaacagtgggtggcccga 37812446  T
Q  310 tagc 313  Q
    ||||    
T  37812447 tagc 37812450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 33606140 - 33606238
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| |||||| |||||||||||||||||||||||| ||| || |||| ||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  33606140 gccatctcctatccgatgtgggactcttaacacaccacctcacgaccatcactattaggcttggttcgtggacataaatggtgggtggcctgatagcgg 33606238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 40379289 - 40379390
Alignment:
Q  211 tgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgat 310  Q
    ||||| |||| | |||| |||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  40379289 tgtcaggccatcacctatccgatgtgggactcttaacacacctcctcacgaccagcacttttgggcttggttcgtggatataaatggtgggtggcccgat 40379388  T
Q  311 ag 312  Q
    ||    
T  40379389 ag 40379390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 16533552 - 16533448
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| ||| ||| ||||||||||||||||| || || |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16533552 ttgtcaggccatcacctatccggtgtaggactcttaacacaccctctcacgaccagcactattggccttggttcgtggacataaatggtgggtggcccga 16533453  T
Q  310 tagcg 314  Q
    |||||    
T  16533452 tagcg 16533448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 15124646 - 15124728
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||||||||||||| || |||||||    
T  15124646 ccgatgtgggactcttaacacatcccctcacaaccagcactattggacttggttcgtggacataaatggtggatgacccgata 15124728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 17525197 - 17525283
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||| |||| ||||||||||| || || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17525197 ccgatgtgagacttttaacacacccactcacgaccatcactattgggcttggttcgtggacataaatggtgggtggcccgatagcgg 17525283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 93215 - 93299
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||| ||||||||||||||||||||||||||   || ||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  93215 cctatccgatgtgggactcttaacacacccc---acgaccagcactattgggcttgattcgtggacataattggtgggtggcccgata 93299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 18607088 - 18607189
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| | |||||| |||||| ||||||| |||  || || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18607088 ttgtcaggccatcacctatctgatgtgagactctaaacacacacccacacgactagcactattgggcttggttcgtagacataaatggtgggttgcccga 18607187  T
Q  310 ta 311  Q
    ||    
T  18607188 ta 18607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 40149101 - 40149183
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||| |||||||||||||||| |  || ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  40149101 ccgatgtgagactcttaacacaccctc--acgaccagcactattgggcttggttcgtggacataaatagtgggtggtccgatagc 40149183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 34515658 - 34515582
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggccc 307  Q
    |||||||||||||||||||| ||| | || | ||||| |||| ||||||||||||||||||||||||||| ||||||    
T  34515658 gatgtgggactcttaacacaacccgtcacgatcagcattatttggcttggttcgtagacataaatggtggatggccc 34515582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 24396086 - 24396001
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattggg--cttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||||||||||||||||||||||| |  |||| ||| ||||||  |||||||| | |||||||||||||||||| |||||||    
T  24396086 ccgatgtgggactcttaacacaccccctcatgaccaacaccattgggggcttggttcatggacataaatggtgggtggtccgatag 24396001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 36352017 - 36352104
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||||| |||||||  ||||||||||||||||| | || |||| ||||||||||||| |||||| |  ||||||||||||||||||||||    
T  36352017 ctcctatccgatgtaagactcttaacacaccccatcacgaccaacactattgggcttcgttcgtgg--ataaatggtgggtggcccgata 36352104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 44404033 - 44404107
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||| | || |||| |||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  44404033 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgatag 44404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 27036491 - 27036535
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  27036491 ttgtcaggccaactcctaaccgatgtgggactcttaacacacccc 27036535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 19981977 - 19981908
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||||||    
T  19981977 ttaacacaccctctcacaattagcactattgagtttggttcgtagacacaaatggtgggtggtccgatag 19981908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 27897684 - 27897725
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacac 251  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  27897684 ttgtcaggccaactcctaaccgatgtgggactcttaacacac 27897725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 17854771 - 17854815
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  17854771 ttgtcaggctaactcctaaccgatgtgggactcttaacacacccc 17854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 2324479 - 2324436
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccc 253  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  2324479 ttgtcaggccaacttctaaccgatgtgggactcttaacacaccc 2324436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 21383387 - 21383474
Alignment:
Q  229 ccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| ||||||||| |||||||||||| ||| ||| |||||||| ||||||| ||| || ||||||  |||||||||| |||||||    
T  21383387 ccgatgcgggactctttaacacaccccctcacacccaccactattgtgcttggtgcgtggatataaataatgggtggcccaatagcgg 21383474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 29718333 - 29718294
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  29718333 ttgtcaagccaactcctaaccgatgtgggactcttaacac 29718294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 13250134 - 13250204
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||| ||||| || |||| ||||||||||| || ||||| ||||||||||||||||| ||| |||||    
T  13250134 ttaacacatcccctcacgaccatcactattgggcatgcttcgtggacataaatggtgggtgccccaatagc 13250204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 13486338 - 13486300
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  13486338 ttgtcaggccaactcctaaccgatgtgggactcttaaca 13486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 32884112 - 32884074
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  32884112 ttgtcaggccaactcctaaccgatgtgggactcttaaca 32884074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 2324237 - 2324205
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacaca 250  Q
    |||||||||||||||||||||||||||||||||    
T  2324237 ccaactcctaaccgatgtgggactcttaacaca 2324205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 5509311 - 5509272
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  5509311 gccaactcctaactgatgtgggactcttaacacacaccct 5509272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 19110455 - 19110380
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||||||||| | || || | ||||||||||| ||||||||||| | |||||||| ||  ||||||||||||    
T  19110455 gactcttaacacacactctcacgatcagcactattgagcttggttcgtgggcataaatgatgaatggcccgatagc 19110380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 32356602 - 32356518
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| |||||||| |||| | |  ||||||| |||||||  | ||||||||| |||||||||||| ||| ||||||||||||    
T  32356602 ccgatgtggaactcttaatacactctc--acaaccaacactattcagtttggttcgtggacataaatggtaggtagcccgatagcgg 32356518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 34893599 - 34893561
Alignment:
Q  276 cttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34893599 cttggttcgtggacataaatggtgggtggtccgatagcg 34893561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 36316130 - 36316176
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| ||||    
T  36316130 ttgtcaggccaacttctaactgatgtgggactcttaacacacaccct 36316176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 37770030 - 37770060
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||||||||||||||||||||||||||||    
T  37770030 ccaactcctaaccgatgtgggactcttaaca 37770060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 41069327 - 41069261
Alignment:
Q  231 gatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatg 296  Q
    |||| ||||||||| ||||||| |||| || ||||| ||||||| ||||||||||| ||||||||||    
T  41069327 gatgcgggactctttaacacactccctcacgaccagtactattgagcttggttcgtggacataaatg 41069261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 19191690 - 19191727
Alignment:
Q  211 tgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  19191690 tgtcaggccaactcctaaccgatgggggactcttaaca 19191727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 31001883 - 31001932
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||| || ||||||||| ||||||  ||||||||    
T  31001883 cactattgggcttggttcgtggatataaatggtaggtggcatgatagcgg 31001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 42895455 - 42895378
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    ||||||||| | || || |||| ||||||| || |||||||   |||||||||||||||| |||||||||||| ||||    
T  42895455 ttaacacacgctctcacgaccaacactattaggtttggttcagggacataaatggtgggtcgcccgatagcggaaact 42895378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 44529739 - 44529787
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||| |||  | |||||||||||||||| ||||||||    
T  44529739 cactattgggcttggtgcgtgaatataaatggtgggtggctcgatagcg 44529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 28245605 - 28245710
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| |||||||| ||||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28245605 ttgtcaggccatcacctatccgatgtgagactcttaacacaccccatcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccga 28245704  T
Q  310 tagcgg 315  Q
    ||||||    
T  28245705 tagcgg 28245710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 35796821 - 35796926
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||||||||  ||||  ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  35796821 ttgtcatgccatgtcctgtccgatgtggaactcttaacacaccccctcacgaccagcactattgggcttggttcgtggagataaatggtgggtggcccga 35796920  T
Q  310 tagcgg 315  Q
    ||||||    
T  35796921 tagcgg 35796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35818940 - 35819013
Alignment:
Q  1 cttgcaacacaagctaccactactacaccagtaccatgcttcccaattgcagatgcaaccatctttcactactt 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35818940 cttgcaacacaagctaccaccactacaccagtaccatgcttcccaattgcagatgcaaccatctttcactactt 35819013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 52559796 - 52559708
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52559796 tcctatccgatgtgggatttttaacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtggcccgata 52559708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 5398573 - 5398659
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  5398573 ccgatgtgggactcttaacacaccccctcacgaccagcactatttggcttggttcgtggacataaatggtgggtggtccgatagcgg 5398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 6778535 - 6778627
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||||||||||||||| || | |||||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  6778535 tcctatccgatgtgggactcttaacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcgg 6778627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 50543423 - 50543510
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    |||| |||||||||| ||||||||||||||||| || |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  50543423 cctatccgatgtggggctcttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgata 50543510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 40717306 - 40717390
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||| || |||||||||||| ||||||||| || |||||||||||||||||| ||||||||||    
T  40717306 gatgtgggactcttaacacaccccctcacgaccagcactattaggcttggtttgtggacataaatggtgggtggtccgatagcgg 40717390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 27634160 - 27634263
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  27634160 ttgtcaggccatgtcctatccgatgtgggactcttaacaccccccctcacgaccagcactattgggcttggttcgtggacataaacagtgggtggtccga 27634259  T
Q  310 tagc 313  Q
    ||||    
T  27634260 tagc 27634263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 35788880 - 35788799
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35788880 ccgatgtgggactcttaacac-ccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgata 35788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 22231152 - 22231257
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| ||||||| |||||||||||||| ||||| |  |  |||||||||||||||||||||| |||||||||||| ||||||||||    
T  22231152 ttgtcaggccatatcctatccgatgtaggactcttaacacatcccctcatgatgagcactattgggcttggttcgtggacataaatggtaggtggcccga 22231251  T
Q  310 tagcgg 315  Q
    ||||||    
T  22231252 tagcgg 22231257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 35819014 - 35819077
Alignment:
Q  252 ccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  35819014 cccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtgacccgatagcgg 35819077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 24974328 - 24974250
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggccc 307  Q
    ||||||||||||||||||||||| |  | || || ||| ||||||||||||||||||||||||||||||||||||||||    
T  24974328 ccgatgtgggactcttaacacactctgtcacgactagcgctattgggcttggttcgtagacataaatggtgggtggccc 24974250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 6218432 - 6218339
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||| | |||||| ||||||||||||||||||| || ||||||||||||||||||||||| |  ||||||||| |||||| || ||||||||    
T  6218432 ctcctatctgatgtgagactcttaacacaccccctcacgaccagcactattgggcttggttcttgtacataaatgatgggtgacctgatagcgg 6218339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 25324146 - 25324223
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    |||||||||||||| ||| |||  ||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  25324146 ttaacacaccccctcacacccaatactattgggcttggtgcgtagatataaatggtgggtggcccgatagcggaaact 25324223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 5398312 - 5398391
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||||||||| | || |||| || ||||||||||||||||| |||||||||||||||||| |||||||    
T  5398312 atgtgggactcttaacacacccc-tcacgaccaacattattgggcttggttcgtggacataaatggtgggtggtccgatag 5398391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 35645279 - 35645354
Alignment:
Q  245 aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    |||||||||||| || |||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  35645279 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaact 35645354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 35645568 - 35645643
Alignment:
Q  245 aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggcaact 320  Q
    |||||||||||| || |||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  35645568 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaact 35645643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 5846384 - 5846338
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5846384 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 5846338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21498800 - 21498754
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  21498800 ttgtcaggccaactcctaaccgatgtgggactcttaacacaccccct 21498754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 53828368 - 53828414
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  53828368 ttgtcaggccaactcctaaccgatgtgggactcttaacacaccccct 53828414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 11036590 - 11036695
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||||| || | |||| | ||| |||||||||||||||| ||||| || ||| ||| ||||| ||||||||| | ||||| |||||||||||||| ||    
T  11036590 ttgtcatgtcatcacctatctgatttgggactcttaacacaacccctcacgacctgcaatattgagcttggttcatggacattaatggtgggtggcctga 11036689  T
Q  310 tagcgg 315  Q
    ||||||    
T  11036690 tagcgg 11036695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 12005567 - 12005658
Alignment:
Q  229 ccgatgtgggactctt-aacacac-ccccttacaaccagcactattgggcttg---gttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||| ||||||| ||||| || |||||||||||||||||||   |||||| ||||||||||||| |||||| ||||||||    
T  12005567 ccgatgtgggactctttaacacacacccctcacgaccagcactattgggcttgttggttcgttgacataaatggtgtgtggcctgatagcgg 12005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 4645844 - 4645777
Alignment:
Q  248 acacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||| || |||| |||| ||||||||| ||||| ||||||| |||||||||||||||||||||    
T  4645844 acaccccctcacgaccaacacttttgggcttgattcgtggacataattggtgggtggcccgatagcgg 4645777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 36686016 - 36686090
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||| |||| || |||||||||||| |||||   || ||| |||||||||||||||||||||||||||    
T  36686016 gactcttaacacacaccctcacgaccagcactattaggctt---tcataggcataaatggtgggtggcccgatagcgg 36686090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 13555345 - 13555421
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcc 306  Q
    ||||||||| ||||||||||| |||||| || | || |||||||||||||||||||| | ||||||| ||||||||||    
T  13555345 ccgatgtggaactcttaacaccccccctcacgatcaacactattgggcttggttcgt-ggcataaatcgtgggtggcc 13555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 20726737 - 20726786
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  20726737 cactattgggcttggtgcgtggatataaatggtgggtggcccgatagcgg 20726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 1215971 - 1215903
Alignment:
Q  235 tgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggt 302  Q
    |||||||||| ||||||| ||||||  |||| ||||||||| |||||||||| ||||||||||||||||    
T  1215971 tgggactctttaacacactcccttatgaccaacactattggacttggttcgtggacataaatggtgggt 1215903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 11103975 - 11104014
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  11103975 ttgtcaggccaactcctaaccgatgtgggactcttaacac 11104014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 20821978 - 20821939
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  20821978 ttgtcaggccaactcctaaccgatgtgggactcttaacac 20821939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 7806660 - 7806706
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  7806660 ttgtcaggccaactcctaaccgatgtgggacactttacacaccccct 7806706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 21498359 - 21498321
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21498359 ttgtcaggccaactcctaaccgatgtgggactcttaaca 21498321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 35819207 - 35819245
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  35819207 ttgtcaggccaactcctaaccgatgtgggactcttaaca 35819245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 6666485 - 6666581
Alignment:
Q  217 gccaactcctaaccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||| |||| |||| ||| ||||||||| ||||||| |||| ||  | |||||||||||||||||| | | || |||||||||||||| ||||||||    
T  6666485 gccatctcccaaccaatgcgggactctttaacacacaccctcacgcctagcactattgggcttggtgcatggatataaatggtgggtgacccgatag 6666581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 256
Target Start/End: Original strand, 14783047 - 14783078
Alignment:
Q  225 ctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||||||||||||||||||    
T  14783047 ctaaccgatgtgggactcttaacacaccccct 14783078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 21750140 - 21750211
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgg 300  Q
    |||||||| |||| |||||||||||||| || ||||| | ||||||  ||||||||| |||||||| |||||    
T  21750140 ccgatgtgagacttttaacacaccccctcacgaccagtattattggatttggttcgtggacataaacggtgg 21750211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 9685629 - 9685591
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  9685629 ccaactcctaaccgatgcgggactcttaacaccccccct 9685591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 12869108 - 12869154
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  12869108 ttgtcaggccaactgctaactgatgtaggactcttaacacaccccct 12869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 25052857 - 25052819
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  25052857 ttgtcaggccaattcctaaccgatgtgggactcttaaca 25052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 31945129 - 31945059
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    |||||||||  ||| || || ||| |||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  31945129 ttaacacacatcctcacgactagccctattgggtttggtttgtagacataaatggtaggtggtccgatagc 31945059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 53814786 - 53814820
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||||| ||||||||||||||||||||    
T  53814786 ctcctaaccgatgttggactcttaacacaccccct 53814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 53815008 - 53815046
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  53815008 ttgtcaggccaactcctaaccgatgtggaactcttaaca 53815046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 53828602 - 53828640
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  53828602 ttgtcaggccaactcctaaccgatgtggaactcttaaca 53828640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 980138 - 980167
Alignment:
Q  219 caactcctaaccgatgtgggactcttaaca 248  Q
    ||||||||||||||||||||||||||||||    
T  980138 caactcctaaccgatgtgggactcttaaca 980167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 7926544 - 7926487
Alignment:
Q  229 ccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgt 285  Q
    |||||||||||||||| |||||||||||| || || | || |||||||||||||||||    
T  7926544 ccgatgtgggactctttaacacaccccctcacgactaccattattgggcttggttcgt 7926487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 14783275 - 14783304
Alignment:
Q  219 caactcctaaccgatgtgggactcttaaca 248  Q
    ||||||||||||||||||||||||||||||    
T  14783275 caactcctaaccgatgtgggactcttaaca 14783304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 1518169 - 1518125
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| | |||||||||||||||||||||||| ||||| |||||    
T  1518169 ttgtcaggtcaactcctaaccgatgtgggactcataacaaacccc 1518125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 34992832 - 34992741
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  34992832 cctatccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgacccgacagcgg 34992741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 4155544 - 4155459
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  4155544 cgatgtgggactcttaacacaccctctcacgaccagcactattgggcttggttcgtcgacataaacggtgggtggcccgatagcgg 4155459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 35038273 - 35038377
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| |||| | |||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  35038273 ttgtcaggccatcacctatccgatgtgggactcttaacacaccccctcacgaccagtactattgggcttggttcgtggacataaatggtgggtgg-ccga 35038371  T
Q  310 tagcgg 315  Q
    ||||||    
T  35038372 tagcgg 35038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 20327693 - 20327798
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||| ||||  ||||| ||||||||||| ||||||||||||| || || |||| |||||||||||||||||| | |||||||||||||||||||||||    
T  20327693 ttgtcaggccatgtcctatccgatgtgggattcttaacacacccgctcacgaccaacactattgggcttggttcctggacataaatggtgggtggcccga 20327792  T
Q  310 tagcgg 315  Q
    ||||||    
T  20327793 tagcgg 20327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 311
Target Start/End: Complemental strand, 31317471 - 31317370
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccga 309  Q
    |||||||| ||  ||||| ||||||| |||||||||||||||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  31317471 ttgtcatgtcatgtcctatccgatgtaggactcttaacacaccccctcacgaccagcactattgagtttggttcgtggacataaatggtgggtggcccga 31317372  T
Q  310 ta 311  Q
    ||    
T  31317371 ta 31317370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 39683366 - 39683450
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||||||||  |||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  39683366 ccgatgtgggactcttaacacagtccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagc 39683450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 20303162 - 20303248
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||||||||| ||||||||||||| || || ||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||    
T  20303162 ccgatgtgggattcttaacacacccgctcacgaccagcactgttggacttggttcgtggacataaatggtgggtggaccgatagcgg 20303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 13574782 - 13574869
Alignment:
Q  229 ccgatgtgggactctt-aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||| ||||||| |||| || || |||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  13574782 ccgatgtgggactctttaacacactccctcacgactagcactattgggcttggttcgtggacataaatggtgggtgacacgatagcgg 13574869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 19954318 - 19954400
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||||||||||||||||| |||||| || ||||| ||||||||||||||||||| |||||||||||||||||| | |||||||    
T  19954318 gatgtgggactcttaacac-ccccctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggtcagatagcg 19954400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 16239804 - 16239731
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgata 311  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||| ||||||||||||||||||| |||||    
T  16239804 gactcttaacacaccccctcacgaccatcactattgagcttggttcgtggacataaatggtgggtggctcgata 16239731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 54368727 - 54368630
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggccc 307  Q
    |||||| |||| || ||| ||||||| |||||||||| ||||||| | ||||||||||  |||||||||| ||| | |||||||||||||||||||||    
T  54368727 ttgtcaggccatcttctatccgatgttggactcttaatacaccccgtcacaaccagcaaaattgggcttgattcctggacataaatggtgggtggccc 54368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 22729714 - 22729628
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||| ||||||||||||||  | || || |||| ||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  22729714 ccgatgtgggcctcttaacacacccgttcacgactagcattattgggcttggttcgtggacataaattgtgggtgatccgatagcgg 22729628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 52724084 - 52724169
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    |||||||||||||||||||||||| | | || | || |||||| | | ||||||| | ||||||||||||||||||||||||||||    
T  52724084 ccgatgtgggactcttaacacacctcttcacgatcaacactatcgagtttggttcatggacataaatggtgggtggcccgatagcg 52724169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 26753385 - 26753467
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||  |||||||||||||||||| |||| |||||| |||||| |||||||||  ||||||| || ||||| ||||||||    
T  26753385 cgatgtgatactcttaacacaccccctcacaagcagcacaattgggtttggttcgtgaacataaacggcgggtgccccgatag 26753467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 313
Target Start/End: Original strand, 29575806 - 29575852
Alignment:
Q  267 actattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29575806 actattgggcttggttcgtagacataaatagtgggtggcctgatagc 29575852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 8018966 - 8018927
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  8018966 gccaacttctaaccgatgtgggactcttaacacaccccct 8018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 20303280 - 20303331
Alignment:
Q  261 accagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||| ||||||||| |||||||||| |||||||||||||||||| |||||||    
T  20303280 accaacactattggacttggttcgtggacataaatggtgggtggaccgatag 20303331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 28087090 - 28087129
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  28087090 gccaacttctaaccgatgtgggactcttaacacaccccct 28087129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 46139446 - 46139399
Alignment:
Q  266 cactattgggcttggttcgtagacataaatggtgggtggcccgatagc 313  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  46139446 cactattgggcttggtttgtgaacataaatggtgggtggcccgatagc 46139399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 6487412 - 6487450
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  6487412 ttgtcaggccaactcctaaccgatgtgggactcttaaca 6487450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 9273192 - 9273154
Alignment:
Q  218 ccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9273192 ccaattcctaaccgatgtgggactcttaacacaccccct 9273154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 17638413 - 17638367
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||    
T  17638413 ttgtcaggccagcttctaaccgatgtgggactcttaacacaccccct 17638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 20327928 - 20327966
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  20327928 ttgtcaggccaactcctaaccgatgtgggactcttaaca 20327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 23691271 - 23691317
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  23691271 ttgtcaggctaactcctaaccgatgtgggactcttaacacacaccct 23691317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 23708071 - 23708117
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  23708071 ttgtcaggctaactcctaaccgatgtgggactcttaacacacaccct 23708117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 23726527 - 23726573
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  23726527 ttgtcaggctaactcctaaccgatgtgggactcttaacacacaccct 23726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 23744983 - 23745029
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  23744983 ttgtcaggctaactcctaaccgatgtgggactcttaacacacaccct 23745029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 24063508 - 24063554
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  24063508 ttgtcaggctaactcctaaccgatgtgggactcttaacacacaccct 24063554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 8142515 - 8142585
Alignment:
Q  238 gactcttaacacacccccttacaaccagc----actattgggcttggttcgtagacataaatggtgggtgg 304  Q
    ||||||||||||| ||||| |||||||||    ||||| | ||||||||||| ||||||||||||||||||    
T  8142515 gactcttaacacatcccctcacaaccagccatcactatagagcttggttcgtggacataaatggtgggtgg 8142585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 23607465 - 23607505
Alignment:
Q  220 aactcctaaccgatgtgggactcttaacacacccccttaca 260  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  23607465 aactcctaactgatgtgggactcttaacacatccccttaca 23607505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 29215690 - 29215753
Alignment:
Q  232 atgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatg 296  Q
    |||| |||||||||||||| ||||| || |||| |||||||||| ||||||||| ||||||||||    
T  29215690 atgttggactcttaacaca-cccctcacgaccaacactattgggtttggttcgtggacataaatg 29215753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 39269263 - 39269208
Alignment:
Q  261 accagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcggc 316  Q
    |||| ||||||| || ||||||||| |||||||||||||||||| |||||| ||||    
T  39269263 accaacactattagggttggttcgtggacataaatggtgggtggtccgataacggc 39269208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 11589790 - 11589752
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  11589790 ttgtcaggccaactcctaaccgatgtgagactcttaaca 11589752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 11590011 - 11589981
Alignment:
Q  222 ctcctaaccgatgtgggactcttaacacacc 252  Q
    |||||||||||||||||||||||||||||||    
T  11590011 ctcctaaccgatgtgggactcttaacacacc 11589981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 17638240 - 17638202
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaaca 248  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  17638240 ttgtcaggccaactcctaaccgatgtggaactcttaaca 17638202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 1722938 - 1722967
Alignment:
Q  227 aaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||||||||||||||||    
T  1722938 aaccgatgtgggactcttaacacaccccct 1722967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 2137 - 2051
Alignment:
Q  229 ccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  2137 ccgatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcgg 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 2721 - 2629
Alignment:
Q  223 tcctaaccgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    ||||| |||||||||||||||||||||||||||| || | |||||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  2721 tcctatccgatgtgggactcttaacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcgg 2629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 82060 - 81981
Alignment:
Q  231 gatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgat 310  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| ||||| ||||    
T  82060 gatgtgggactcttaacacaccccctcacgaccagcactattgggcttggttcatggacataaatggtgcgtggctcgat 81981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 5633 - 5703
Alignment:
Q  245 aacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  5633 aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcgg 5703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 12866 - 12783
Alignment:
Q  230 cgatgtgggactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatagcg 314  Q
    ||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||  ||||||||||||||||  |||||||||    
T  12866 cgatgtggggctcttaacacaccccctcacg-ccagcactattgagcttggttcgtgaacataaatggtgggtgttccgatagcg 12783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 14617 - 14543
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||| | || |||| |||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  14617 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgatag 14543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 10951 - 10877
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||| | || |||| |||||||||||||||||| | ||||||||| ||||||| ||| ||||    
T  10951 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaatag 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 51480 - 51411
Alignment:
Q  243 ttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  51480 ttaacacatcccctcacaaccaacactattgggcttggttcgtgaacataaatgataggtggcccgatag 51411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 14529 - 14438
Alignment:
Q  224 cctaaccgatgtgggactcttaacacacccccttacaaccagcactat--tgggcttggttcgtagacataaatggtgggtggcccgatagcgg 315  Q
    |||| ||||||||||||||||||| | |||||  || ||||| |||||  |||||||| ||||| |||||||||||| ||||||||||||||||    
T  14529 cctatccgatgtgggactcttaacgccccccc--acgaccagtactatattgggcttgattcgtggacataaatggtaggtggcccgatagcgg 14438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 13310 - 13236
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtggcccgatag 312  Q
    ||||||||||||||||| | || |||| |||||||||||||||||| | ||||||||| ||||||| ||| ||||    
T  13310 gactcttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaatag 13236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 67462 - 67396
Alignment:
Q  238 gactcttaacacacccccttacaaccagcactattgggcttggttcgtagacataaatggtgggtgg 304  Q
    |||||||||||||| || | ||| ||| |||||||| ||||||||||| ||||||||||||||||||    
T  67462 gactcttaacacacaccgtcacagccaacactattgagcttggttcgtggacataaatggtgggtgg 67396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 3550 - 3589
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacac 249  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3550 ttgtcatgtcaactcctaaccgatgtgggactcttaacac 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 3323 - 3362
Alignment:
Q  217 gccaactcctaaccgatgtgggactcttaacacaccccct 256  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  3323 gccaactcctaatcgatgtgagactcttaacacaccccct 3362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 303
Target Start/End: Complemental strand, 5895 - 5802
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccccttacaaccagcacta-ttgggcttggttcgtagacataaatggtgggtg 303  Q
    ||||||||||| || ||| ||||||||| ||| |||||||| ||||| || ||||||| || ||||||||||||||| | |||||| ||||||||    
T  5895 ttgtcatgccatcttctatccgatgtggaactgttaacaca-cccctcacgaccagcattatttgggcttggttcgtgggcataaacggtgggtg 5802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 256
Target Start/End: Complemental strand, 56683 - 56652
Alignment:
Q  225 ctaaccgatgtgggactcttaacacaccccct 256  Q
    ||||||||||||||||||||||||||||||||    
T  56683 ctaaccgatgtgggactcttaacacaccccct 56652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 56455 - 56426
Alignment:
Q  219 caactcctaaccgatgtgggactcttaaca 248  Q
    ||||||||||||||||||||||||||||||    
T  56455 caactcctaaccgatgtgggactcttaaca 56426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 4508 - 4552
Alignment:
Q  210 ttgtcatgccaactcctaaccgatgtgggactcttaacacacccc 254  Q
    |||||| ||||||||||||| ||||||| ||||||||||| ||||    
T  4508 ttgtcaggccaactcctaactgatgtggcactcttaacacccccc 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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