View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12292_low_3 (Length: 225)

Name: NF12292_low_3
Description: NF12292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12292_low_3
NF12292_low_3
[»] chr7 (56 HSPs)
chr7 (26-208)||(38505327-38505508)
chr7 (26-208)||(43348222-43348402)
chr7 (78-208)||(33872103-33872232)
chr7 (34-207)||(45940394-45940566)
chr7 (26-158)||(19791599-19791728)
chr7 (32-208)||(4058129-4058307)
chr7 (35-208)||(6746562-6746731)
chr7 (26-208)||(15748932-15749123)
chr7 (26-205)||(43741614-43741790)
chr7 (32-170)||(16805598-16805735)
chr7 (103-205)||(24924576-24924678)
chr7 (29-170)||(42112990-42113128)
chr7 (104-208)||(2826230-2826345)
chr7 (135-208)||(19644316-19644390)
chr7 (103-208)||(38137923-38138029)
chr7 (103-208)||(23551640-23551744)
chr7 (135-208)||(31891301-31891374)
chr7 (59-169)||(46442649-46442757)
chr7 (120-170)||(31055374-31055424)
chr7 (127-208)||(5968036-5968118)
chr7 (103-208)||(30081360-30081466)
chr7 (27-170)||(42253868-42254008)
chr7 (36-208)||(30080889-30081070)
chr7 (132-208)||(30183860-30183934)
chr7 (124-208)||(41471452-41471536)
chr7 (131-199)||(32429933-32430000)
chr7 (161-208)||(374549-374596)
chr7 (126-196)||(32820227-32820306)
chr7 (103-169)||(4788034-4788100)
chr7 (53-208)||(17818241-17818384)
chr7 (144-202)||(45510376-45510434)
chr7 (30-158)||(4125861-4125985)
chr7 (175-208)||(10591887-10591920)
chr7 (103-159)||(13697264-13697321)
chr7 (120-208)||(35264875-35264953)
chr7 (104-153)||(44858149-44858198)
chr7 (26-105)||(3892700-3892780)
chr7 (103-175)||(7391436-7391507)
chr7 (165-205)||(14676285-14676325)
chr7 (162-214)||(16568551-16568603)
chr7 (162-214)||(16597059-16597111)
chr7 (103-206)||(43741329-43741433)
chr7 (36-199)||(17884187-17884356)
chr7 (126-197)||(39856369-39856440)
chr7 (161-208)||(42254019-42254066)
chr7 (135-186)||(44720104-44720155)
chr7 (170-208)||(1277998-1278036)
chr7 (32-200)||(34670109-34670276)
chr7 (162-208)||(41002234-41002280)
chr7 (175-208)||(13044212-13044245)
chr7 (175-208)||(42266990-42267023)
chr7 (163-208)||(43188910-43188955)
chr7 (175-208)||(45066788-45066821)
chr7 (103-158)||(1277920-1277976)
chr7 (30-74)||(32650506-32650550)
chr7 (126-158)||(33187889-33187921)
[»] chr3 (65 HSPs)
chr3 (26-208)||(49183599-49183783)
chr3 (26-208)||(38639496-38639677)
chr3 (26-208)||(37674136-37674314)
chr3 (26-208)||(53664592-53664773)
chr3 (106-208)||(35989102-35989204)
chr3 (104-208)||(47359302-47359407)
chr3 (36-206)||(3537125-3537302)
chr3 (37-208)||(44400628-44400797)
chr3 (36-194)||(50535108-50535266)
chr3 (26-170)||(33944671-33944813)
chr3 (78-207)||(40118881-40119006)
chr3 (32-208)||(25754095-25754268)
chr3 (26-170)||(33908980-33909121)
chr3 (103-205)||(1132921-1133024)
chr3 (58-158)||(45570986-45571085)
chr3 (128-208)||(48370172-48370253)
chr3 (104-208)||(51686490-51686604)
chr3 (33-206)||(27197167-27197348)
chr3 (127-208)||(2420677-2420757)
chr3 (135-208)||(34306623-34306696)
chr3 (26-168)||(50948112-50948254)
chr3 (124-208)||(52620818-52620903)
chr3 (32-170)||(5939812-5939949)
chr3 (37-208)||(29623156-29623334)
chr3 (103-208)||(24588276-24588382)
chr3 (103-208)||(16883337-16883443)
chr3 (136-197)||(2927868-2927929)
chr3 (103-158)||(11500086-11500142)
chr3 (26-167)||(22225274-22225413)
chr3 (52-170)||(48908905-48909021)
chr3 (86-208)||(35283054-35283185)
chr3 (103-170)||(48444489-48444556)
chr3 (162-208)||(53888539-53888585)
chr3 (162-207)||(31178231-31178276)
chr3 (137-198)||(33281709-33281770)
chr3 (49-170)||(517663-517780)
chr3 (146-206)||(39114949-39115009)
chr3 (30-173)||(47714701-47714842)
chr3 (103-158)||(3458329-3458384)
chr3 (161-208)||(7661087-7661134)
chr3 (162-205)||(32858882-32858925)
chr3 (175-214)||(42155941-42155980)
chr3 (169-208)||(46175256-46175295)
chr3 (161-208)||(47434303-47434350)
chr3 (161-208)||(47714656-47714703)
chr3 (161-208)||(54372559-54372606)
chr3 (104-158)||(7435658-7435712)
chr3 (162-208)||(19148219-19148265)
chr3 (175-205)||(28569510-28569540)
chr3 (174-208)||(36637864-36637898)
chr3 (162-208)||(39499250-39499296)
chr3 (170-208)||(46891446-46891484)
chr3 (162-208)||(47789429-47789475)
chr3 (103-169)||(50345679-50345745)
chr3 (32-94)||(51684537-51684599)
chr3 (161-203)||(54877995-54878037)
chr3 (166-203)||(1339887-1339924)
chr3 (103-172)||(7302068-7302136)
chr3 (135-208)||(21835630-21835703)
chr3 (127-171)||(17642596-17642640)
chr3 (168-208)||(27055887-27055927)
chr3 (103-181)||(30995852-30995932)
chr3 (165-205)||(37457058-37457098)
chr3 (135-199)||(38401911-38401975)
chr3 (103-170)||(53888469-53888537)
[»] chr5 (49 HSPs)
chr5 (26-208)||(38568360-38568546)
chr5 (26-208)||(14570033-14570214)
chr5 (26-207)||(10437893-10438073)
chr5 (26-208)||(5772713-5772893)
chr5 (26-206)||(18675708-18675886)
chr5 (26-208)||(10842952-10843132)
chr5 (107-205)||(19389814-19389912)
chr5 (125-208)||(3925774-3925857)
chr5 (26-158)||(35683516-35683647)
chr5 (39-208)||(8943967-8944143)
chr5 (103-208)||(35708745-35708852)
chr5 (135-207)||(3676499-3676571)
chr5 (35-208)||(43496864-43497023)
chr5 (45-158)||(10955733-10955845)
chr5 (37-158)||(39649489-39649609)
chr5 (103-206)||(29799629-29799733)
chr5 (35-152)||(15974256-15974372)
chr5 (139-208)||(37909020-37909089)
chr5 (124-208)||(13293967-13294051)
chr5 (132-208)||(41923180-41923256)
chr5 (135-202)||(9096334-9096401)
chr5 (104-202)||(9684780-9684879)
chr5 (143-201)||(39549890-39549950)
chr5 (120-214)||(6373137-6373241)
chr5 (149-208)||(13450508-13450567)
chr5 (169-208)||(35705129-35705168)
chr5 (162-208)||(1935090-1935136)
chr5 (162-208)||(26149655-26149701)
chr5 (127-202)||(38120177-38120250)
chr5 (165-205)||(5088856-5088896)
chr5 (165-205)||(17668120-17668160)
chr5 (139-195)||(32125269-32125325)
chr5 (165-208)||(15974395-15974438)
chr5 (161-208)||(38289364-38289411)
chr5 (137-203)||(12150599-12150665)
chr5 (162-208)||(17092949-17092995)
chr5 (129-167)||(18671041-18671079)
chr5 (162-208)||(27480155-27480201)
chr5 (135-201)||(32750656-32750722)
chr5 (162-208)||(37508373-37508419)
chr5 (127-157)||(41638361-41638391)
chr5 (175-208)||(2679869-2679902)
chr5 (175-208)||(9621924-9621957)
chr5 (163-208)||(10295536-10295581)
chr5 (164-208)||(6491238-6491282)
chr5 (164-208)||(13569417-13569461)
chr5 (127-170)||(25026928-25026972)
chr5 (170-202)||(33682432-33682464)
chr5 (126-170)||(39428947-39428991)
[»] scaffold0002 (1 HSPs)
scaffold0002 (26-208)||(90868-91049)
[»] chr2 (63 HSPs)
chr2 (32-208)||(31082729-31082903)
chr2 (26-208)||(1364740-1364921)
chr2 (26-170)||(34757512-34757655)
chr2 (35-208)||(6656034-6656208)
chr2 (35-208)||(15555338-15555510)
chr2 (26-208)||(5322112-5322292)
chr2 (35-208)||(4003344-4003506)
chr2 (26-170)||(11514951-11515094)
chr2 (32-208)||(28539409-28539593)
chr2 (63-208)||(39204960-39205115)
chr2 (120-206)||(41100100-41100186)
chr2 (103-199)||(15803170-15803267)
chr2 (37-168)||(37194185-37194315)
chr2 (104-208)||(16813618-16813722)
chr2 (104-208)||(16852897-16853001)
chr2 (26-170)||(26905711-26905854)
chr2 (26-169)||(21626031-21626172)
chr2 (26-170)||(13018509-13018652)
chr2 (30-146)||(30072463-30072578)
chr2 (52-208)||(35550141-35550303)
chr2 (26-208)||(39750065-39750240)
chr2 (120-208)||(11522163-11522261)
chr2 (52-208)||(43190532-43190686)
chr2 (104-170)||(40211986-40212053)
chr2 (103-205)||(3737222-3737324)
chr2 (141-203)||(5002775-5002837)
chr2 (125-199)||(39913260-39913334)
chr2 (135-208)||(13767444-13767516)
chr2 (103-167)||(36870245-36870310)
chr2 (136-208)||(6128837-6128908)
chr2 (127-206)||(30312400-30312480)
chr2 (104-208)||(43572527-43572642)
chr2 (120-167)||(3254635-3254682)
chr2 (169-208)||(16625787-16625826)
chr2 (161-208)||(21626176-21626223)
chr2 (103-158)||(39819880-39819935)
chr2 (163-205)||(567439-567481)
chr2 (135-205)||(14385105-14385175)
chr2 (162-208)||(18780436-18780482)
chr2 (139-208)||(14166985-14167054)
chr2 (103-156)||(31584811-31584864)
chr2 (26-149)||(18589986-18590107)
chr2 (127-208)||(31550245-31550324)
chr2 (51-208)||(1408807-1408963)
chr2 (162-205)||(8184147-8184190)
chr2 (120-208)||(9087448-9087546)
chr2 (45-198)||(1270695-1270856)
chr2 (162-208)||(4042016-4042062)
chr2 (162-208)||(10165465-10165511)
chr2 (162-208)||(13765922-13765968)
chr2 (104-158)||(30523230-30523284)
chr2 (162-208)||(36567261-36567307)
chr2 (162-208)||(37194319-37194365)
chr2 (139-208)||(3039274-3039342)
chr2 (175-208)||(7486384-7486417)
chr2 (163-208)||(13767255-13767300)
chr2 (169-206)||(36030852-36030889)
chr2 (175-204)||(37217020-37217049)
chr2 (163-208)||(43334860-43334905)
chr2 (103-170)||(21834923-21834991)
chr2 (164-208)||(21834995-21835039)
chr2 (168-208)||(25960593-25960633)
chr2 (162-206)||(44137187-44137231)
[»] chr1 (69 HSPs)
chr1 (26-207)||(36269650-36269840)
chr1 (35-208)||(33324550-33324721)
chr1 (49-208)||(17760468-17760626)
chr1 (27-208)||(50225948-50226128)
chr1 (26-208)||(34154321-34154502)
chr1 (26-208)||(36886777-36886967)
chr1 (36-207)||(27255126-27255296)
chr1 (26-170)||(5584412-5584555)
chr1 (35-208)||(39886907-39887091)
chr1 (120-208)||(43036306-43036395)
chr1 (26-207)||(52068131-52068314)
chr1 (26-158)||(29091994-29092124)
chr1 (103-202)||(28848788-28848888)
chr1 (103-199)||(42333627-42333723)
chr1 (136-208)||(35619497-35619569)
chr1 (26-168)||(37649649-37649790)
chr1 (26-155)||(46001474-46001601)
chr1 (35-208)||(50586964-50587132)
chr1 (37-208)||(5970424-5970593)
chr1 (32-170)||(41817330-41817466)
chr1 (139-208)||(32511605-32511674)
chr1 (78-170)||(41432797-41432887)
chr1 (77-156)||(69692-69769)
chr1 (103-199)||(17556649-17556750)
chr1 (135-203)||(30543351-30543419)
chr1 (103-202)||(52073447-52073547)
chr1 (104-170)||(2909101-2909168)
chr1 (102-208)||(50476519-50476626)
chr1 (127-208)||(15463826-15463908)
chr1 (166-208)||(34738372-34738414)
chr1 (52-208)||(32672547-32672691)
chr1 (133-208)||(45752220-45752292)
chr1 (120-207)||(49102956-49103034)
chr1 (135-208)||(51246557-51246629)
chr1 (135-208)||(43571948-43572018)
chr1 (162-208)||(2925918-2925964)
chr1 (162-208)||(27500036-27500082)
chr1 (135-205)||(34750001-34750071)
chr1 (165-207)||(37955233-37955275)
chr1 (162-208)||(38795389-38795435)
chr1 (139-208)||(666303-666372)
chr1 (165-214)||(33854816-33854865)
chr1 (165-214)||(33926057-33926106)
chr1 (91-208)||(42806141-42806268)
chr1 (120-168)||(33579234-33579282)
chr1 (162-205)||(17675248-17675291)
chr1 (120-206)||(25561303-25561398)
chr1 (169-208)||(36325774-36325813)
chr1 (120-155)||(50084124-50084159)
chr1 (162-193)||(51303174-51303205)
chr1 (162-208)||(896478-896524)
chr1 (170-208)||(6015491-6015529)
chr1 (162-208)||(19652278-19652324)
chr1 (170-208)||(24436915-24436953)
chr1 (162-208)||(32299154-32299200)
chr1 (120-154)||(34552134-34552168)
chr1 (162-208)||(39889641-39889687)
chr1 (162-208)||(42162036-42162082)
chr1 (162-208)||(47206407-47206453)
chr1 (162-208)||(47905672-47905718)
chr1 (162-207)||(4204763-4204808)
chr1 (127-208)||(26940613-26940691)
chr1 (164-197)||(28718807-28718840)
chr1 (124-169)||(32287584-32287629)
chr1 (36-170)||(7915430-7915563)
chr1 (136-208)||(28748216-28748288)
chr1 (162-206)||(40707189-40707233)
chr1 (125-177)||(41428018-41428070)
chr1 (136-207)||(51572264-51572336)
[»] chr8 (63 HSPs)
chr8 (37-208)||(79606-79776)
chr8 (26-206)||(14581743-14581921)
chr8 (36-208)||(41866110-41866280)
chr8 (26-208)||(26772635-26772815)
chr8 (37-208)||(34335960-34336128)
chr8 (35-170)||(21173889-21174022)
chr8 (120-199)||(31305777-31305856)
chr8 (126-208)||(31149918-31150000)
chr8 (103-208)||(28416154-28416259)
chr8 (26-207)||(43239577-43239766)
chr8 (140-208)||(6943449-6943517)
chr8 (29-208)||(39193841-39194029)
chr8 (36-158)||(8228451-8228571)
chr8 (137-208)||(36837481-36837552)
chr8 (26-158)||(23932601-23932731)
chr8 (120-199)||(39778815-39778893)
chr8 (87-208)||(12506179-12506309)
chr8 (135-206)||(13258511-13258582)
chr8 (128-208)||(27085356-27085446)
chr8 (120-208)||(32158773-32158863)
chr8 (103-208)||(1839803-1839919)
chr8 (137-205)||(16424164-16424233)
chr8 (120-156)||(5911471-5911507)
chr8 (32-208)||(29584107-29584272)
chr8 (104-208)||(44251551-44251655)
chr8 (173-208)||(23702463-23702498)
chr8 (127-170)||(31297379-31297422)
chr8 (103-158)||(41455239-41455294)
chr8 (163-206)||(42589844-42589887)
chr8 (29-208)||(43733103-43733291)
chr8 (143-208)||(5935200-5935266)
chr8 (167-205)||(12595370-12595408)
chr8 (26-91)||(6943542-6943607)
chr8 (132-208)||(32175-32251)
chr8 (166-206)||(1111120-1111160)
chr8 (103-203)||(1840199-1840297)
chr8 (126-170)||(13406433-13406477)
chr8 (103-158)||(5858307-5858362)
chr8 (120-208)||(8948625-8948723)
chr8 (106-169)||(12318975-12319038)
chr8 (137-208)||(35856513-35856583)
chr8 (26-97)||(36837576-36837647)
chr8 (169-208)||(43007757-43007796)
chr8 (162-208)||(1942036-1942082)
chr8 (162-208)||(2474750-2474796)
chr8 (162-208)||(4734479-4734525)
chr8 (86-158)||(4873302-4873373)
chr8 (162-208)||(13865075-13865121)
chr8 (176-206)||(14641463-14641493)
chr8 (166-208)||(23963031-23963073)
chr8 (125-206)||(34148564-34148643)
chr8 (162-208)||(34272567-34272613)
chr8 (120-177)||(7080018-7080073)
chr8 (165-198)||(8228598-8228631)
chr8 (163-208)||(13227763-13227808)
chr8 (162-211)||(22330742-22330791)
chr8 (162-199)||(40985066-40985103)
chr8 (175-208)||(41455324-41455357)
chr8 (125-158)||(44879551-44879584)
chr8 (125-158)||(44880337-44880370)
chr8 (29-65)||(3635611-3635647)
chr8 (137-197)||(10605151-10605211)
chr8 (120-200)||(26042202-26042282)
[»] scaffold0263 (1 HSPs)
scaffold0263 (26-208)||(12242-12423)
[»] chr4 (64 HSPs)
chr4 (26-208)||(49668097-49668277)
chr4 (37-208)||(29114226-29114396)
chr4 (34-207)||(55509803-55509974)
chr4 (32-208)||(45823468-45823643)
chr4 (29-203)||(46176925-46177098)
chr4 (120-208)||(47063692-47063780)
chr4 (48-197)||(35959125-35959273)
chr4 (26-170)||(12708865-12709008)
chr4 (37-169)||(30198803-30198934)
chr4 (26-169)||(38136866-38137008)
chr4 (120-208)||(31428810-31428899)
chr4 (32-158)||(45971475-45971598)
chr4 (26-158)||(16318524-16318655)
chr4 (26-169)||(28175496-28175638)
chr4 (120-199)||(13984966-13985046)
chr4 (49-208)||(368001-368155)
chr4 (139-208)||(28880020-28880089)
chr4 (104-208)||(49936498-49936600)
chr4 (132-202)||(9020956-9021026)
chr4 (26-157)||(33500427-33500557)
chr4 (135-208)||(48417593-48417666)
chr4 (135-208)||(48620312-48620387)
chr4 (35-146)||(52636677-52636786)
chr4 (85-170)||(42650602-42650686)
chr4 (121-170)||(15498825-15498874)
chr4 (136-208)||(32948509-32948581)
chr4 (104-208)||(51974311-51974415)
chr4 (120-202)||(24682985-24683068)
chr4 (35-208)||(37756706-37756878)
chr4 (163-214)||(56504446-56504497)
chr4 (103-208)||(9119770-9119884)
chr4 (162-208)||(24279966-24280012)
chr4 (26-158)||(41709161-41709291)
chr4 (37-95)||(56426813-56426871)
chr4 (163-208)||(8827803-8827848)
chr4 (104-208)||(8828193-8828295)
chr4 (103-172)||(21443005-21443074)
chr4 (175-208)||(40423056-40423089)
chr4 (131-172)||(45899405-45899446)
chr4 (161-205)||(9836758-9836802)
chr4 (168-208)||(16535749-16535789)
chr4 (135-207)||(23708161-23708233)
chr4 (163-202)||(15451325-15451364)
chr4 (161-208)||(47669861-47669908)
chr4 (103-168)||(4442012-4442078)
chr4 (162-208)||(7182174-7182220)
chr4 (162-204)||(16422965-16423007)
chr4 (36-158)||(20896451-20896569)
chr4 (166-208)||(28710399-28710441)
chr4 (162-208)||(32648987-32649033)
chr4 (161-207)||(50494638-50494684)
chr4 (170-208)||(54806530-54806568)
chr4 (163-208)||(13270258-13270303)
chr4 (103-155)||(46669991-46670044)
chr4 (137-206)||(51258724-51258793)
chr4 (175-208)||(52430558-52430591)
chr4 (163-208)||(52594609-52594654)
chr4 (126-159)||(55813668-55813701)
chr4 (164-208)||(11976891-11976935)
chr4 (103-158)||(21081332-21081388)
chr4 (168-208)||(32060704-32060744)
chr4 (175-211)||(32866711-32866747)
chr4 (138-201)||(36553796-36553860)
chr4 (141-197)||(54135822-54135878)
[»] chr6 (31 HSPs)
chr6 (36-208)||(20820523-20820693)
chr6 (29-208)||(26713773-26713951)
chr6 (34-208)||(32719369-32719541)
chr6 (26-206)||(33590314-33590501)
chr6 (26-208)||(1567188-1567379)
chr6 (51-208)||(33212264-33212418)
chr6 (26-173)||(11180187-11180332)
chr6 (37-208)||(28551878-28552048)
chr6 (36-207)||(32221920-32222099)
chr6 (103-205)||(13380522-13380626)
chr6 (116-208)||(33755044-33755137)
chr6 (32-170)||(24874966-24875100)
chr6 (146-214)||(33065832-33065900)
chr6 (129-203)||(29054586-29054660)
chr6 (164-208)||(19477310-19477354)
chr6 (136-206)||(25072516-25072585)
chr6 (119-189)||(6688048-6688118)
chr6 (166-208)||(26289607-26289649)
chr6 (120-170)||(33184197-33184247)
chr6 (128-193)||(4027026-4027091)
chr6 (26-208)||(12779423-12779611)
chr6 (26-156)||(6855542-6855670)
chr6 (121-167)||(4464946-4464992)
chr6 (165-206)||(15615722-15615763)
chr6 (135-208)||(20381849-20381921)
chr6 (37-173)||(22788546-22788680)
chr6 (103-170)||(4089428-4089495)
chr6 (162-208)||(1029345-1029391)
chr6 (162-208)||(24734932-24734978)
chr6 (175-208)||(31345354-31345387)
chr6 (26-74)||(6671427-6671475)
[»] scaffold0991 (1 HSPs)
scaffold0991 (37-208)||(3170-3337)
[»] scaffold0128 (2 HSPs)
scaffold0128 (26-155)||(26286-26414)
scaffold0128 (162-208)||(26432-26478)
[»] scaffold0136 (2 HSPs)
scaffold0136 (36-158)||(2066-2186)
scaffold0136 (164-208)||(2006-2050)
[»] scaffold0053 (1 HSPs)
scaffold0053 (27-208)||(29153-29342)
[»] scaffold0248 (1 HSPs)
scaffold0248 (49-208)||(179-346)
[»] scaffold0059 (1 HSPs)
scaffold0059 (127-208)||(17490-17572)
[»] scaffold0031 (1 HSPs)
scaffold0031 (26-170)||(93537-93680)
[»] scaffold0119 (2 HSPs)
scaffold0119 (45-208)||(37047-37219)
scaffold0119 (45-198)||(30381-30542)
[»] scaffold0051 (4 HSPs)
scaffold0051 (37-208)||(6740-6920)
scaffold0051 (37-208)||(7723-7903)
scaffold0051 (104-158)||(734-788)
scaffold0051 (104-158)||(3611-3665)
[»] scaffold0036 (1 HSPs)
scaffold0036 (103-201)||(82778-82877)
[»] scaffold0140 (1 HSPs)
scaffold0140 (143-208)||(19400-19464)
[»] scaffold0274 (1 HSPs)
scaffold0274 (125-177)||(15922-15974)
[»] scaffold0598 (1 HSPs)
scaffold0598 (128-170)||(9436-9478)
[»] scaffold0028 (1 HSPs)
scaffold0028 (162-208)||(35438-35484)
[»] scaffold0024 (1 HSPs)
scaffold0024 (45-136)||(44985-45072)
[»] scaffold1163 (1 HSPs)
scaffold1163 (37-97)||(1976-2036)
[»] scaffold0927 (1 HSPs)
scaffold0927 (176-208)||(2893-2925)
[»] scaffold0388 (1 HSPs)
scaffold0388 (167-207)||(7128-7168)
[»] scaffold0078 (1 HSPs)
scaffold0078 (162-214)||(4330-4382)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 38505508 - 38505327
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||||| ||||||||||| ||||| | |||||| ||||||||||| |||||||||  ||||||| ||  ||||||    
T  38505508 gaaggcttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttaactttt--cttcataatacaaaaccc 38505411  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| ||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38505410 tcctcatttgggggaactataaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgt 38505327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 43348402 - 43348222
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||| ||||||||||||  ||||| |||||||||||||||||| ||||| | ||||||  |||||||| ||| |||||||||  ||||| || |||| ||    
T  43348402 gaagatttgggaaaaaaagaatgatcaagtgaaagaaatagaggaaaatgggaggggagagctttgggagtt-aactttttt--tcataatactaaatcc 43348306  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||||| ||||||||||||||||| ||  ||||||||||||| || |||||||||||||||||||||||||||||||    
T  43348305 tccttatttgggggaactaaaaaattgtattagaggagggttttggagggttaatatgaattcttcaaatttaatctatgttgt 43348222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 33872232 - 33872103
Alignment:
Q  78 aggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggtttt-ggaggat 175  Q
    |||||| ||||||||||||| |||||||  ||||||| || |||||||||||||||||||| |||||| |||||||||||||  |||||||| ||||| |    
T  33872232 aggggagggctttgggggtt-aactttt--cttcataatactaaaccctcctcatttgggggaactaacaaattgtattggaggagggtttttggagggt 33872136  T
Q  176 ttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||||||||||    
T  33872135 ttatatgaattcttcaaatttaatctatgttgt 33872103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 45940566 - 45940394
Alignment:
Q  34 gggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatt 133  Q
    |||||||||| ||||| |||||| ||||||||||  ||||| | ||  || |||||| |||| |||||||||  ||||||| ||  ||||||||||||||    
T  45940566 gggaaaaaagaaatgaacaagtggaagaaatagaagaaaatgggagatgagggctttagggggttaactttt--cttcataatacaaaaccctcctcatt 45940469  T
Q  134 tgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||| ||||||||||||||||||||||  || |||||||||| || ||| |||||||||||||||||| |||||||    
T  45940468 tggaggaactaaaaaattgtattggagtagagttttggagggttaataagaattcttcaaatttaatttatgttg 45940394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 19791599 - 19791728
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||| |||||||||||| |||||||||| | |||| | |||||| | |||||| |||| |||||||  ||||||| || |||||||    
T  19791599 gaaggtttgggaaaaaaggaatgagcaagtggaagaaatagaaacaaatgggaggggaggactttggaggtt-aactttt--cttcataatactaaaccc 19791695  T
Q  126 tcctcatttggggaactaaaaaattgtattgga 158  Q
     ||||||||||||||||||||||||||||||||    
T  19791696 acctcatttggggaactaaaaaattgtattgga 19791728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 4058307 - 4058129
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||  ||| || ||||| ||||||||||| ||||| ||||  || ||||||||||| |||||  ||||||||||| ||  |||||||||||     
T  4058307 ttgggaaaaaaaaaataagtaagtggaagaaatagaggaaaatggaagatgagggctttggggggttaac--ttttcttcataatacaaaaccctcctcg 4058210  T
Q  132 tttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttat---atgaattcttcaaatttaatctatgttgt 208  Q
    ||||| | ||||||||||||||||||||  ||||||||||||| || ||   | |||||||||||||||||| ||||||||    
T  4058209 tttggagcaactaaaaaattgtattggatgagggttttggagggttaataagaagaattcttcaaatttaatttatgttgt 4058129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 6746731 - 6746562
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||| |||   ||||  ||||| | |||||| ||||||||||| ||||  |||||||| ||| ||  ||||  |||||||||    
T  6746731 ggaaaaaaggaatgagcaagtggaag---tagaagaaaatgggaggggagggctttggggggttaa--tttttctttataatacaaaactttcctcattt 6746637  T
Q  135 gggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||| |||||||||||||||   ||| |||||||| |||||||||||||||||||||||| |||||||||    
T  6746636 gggggaactcaaaaattgtattggagggggggtttggagggtttatatgaattcttcaaatttaacctatgttgt 6746562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 15749123 - 15748932
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || |||  |||||||||| |||||  ||||||||||| ||  ||||||    
T  15749123 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaac--ttttcttcataatacaaaaccc 15749026  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||  |          |||||||||||| || ||| |||||||||||||||||| ||||||||    
T  15749025 tcctcatttggaggaactaaaaaattgtattggatgagggattttgggggttttggagggttaataagaattcttcaaatttaatttatgttgt 15748932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 43741614 - 43741790
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| |||||||||||||||||||||||| ||||| | |||||| || |||| ||  |||||  ||||||||||| ||  |||| |    
T  43741614 gaaggcttgagaaaaaaggaatgagcaagtgaaagaaatagaggaaaatgggaggggagggttttgtgg--ttaac--ttttcttcataatacaaaactc 43741709  T
Q  126 tcctcatttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||||||| ||||| ||||||||||||  |  ||| |||||  || ||| ||||||||||||||||||||| |||||    
T  43741710 tcctcatttgggagaactcaaaaattgtattaaaggaggattttgtggggtttgtatgaattcttcaaatttaatttatgt 43741790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 16805735 - 16805598
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| ||| || ||||| |||||| |||| ||||| | || ||| |||||||||||||||||  ||||||||||| ||  ||||| || |||    
T  16805735 ttgggaaaaaaggaataagtaagtggaagaaagagaggaaaatgggagaggagggctttgggggtttaac--ttttcttcataatacaaaaccttcttca 16805638  T
Q  132 tttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||| ||||||||||||||||||||||  ||||||||||    
T  16805637 tttggaggaactaaaaaattgtattggaggagggttttgg 16805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 24924678 - 24924576
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||||||| ||  |||||||||||||||| ||||||  ||||||||||| ||  |  |||||||| | ||||||||||||||||||||||||||||    
T  24924678 tttttcttcataatacaaaaccctcctcatttgaggaacttgaaaattgtatttgaggaaagttttggatggtttatatgaattcttcaaatttaatcta 24924579  T
Q  203 tgt 205  Q
    |||    
T  24924578 tgt 24924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 42113128 - 42112990
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcc 128  Q
    ||||| ||||||||| || ||||||||| |||||||||||   | | | || ||| || |||||||| ||||  |||||||||||| || ||||| ||||    
T  42113128 ggttttggaaaaaaggaaggagcaagtggaagaaatagagtccattgggagagga-ggttttggggggttaa--tttttcttcataatactaaactctcc 42113032  T
Q  129 tcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  42113031 tcatttggggaactaaaaagttgtattggaatagggttttgg 42112990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 2826345 - 2826230
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggagga----------tttatatgaattcttcaa 192  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||  |||||||||| |||          ||||||||||||||||||    
T  2826345 ttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttgggggattttggaagctttatatgaattcttcaa 2826246  T
Q  193 atttaatctatgttgt 208  Q
    |||||||| |||||||    
T  2826245 atttaatcaatgttgt 2826230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 19644316 - 19644390
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaa-ttcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||| || |||||||| ||||||||||||    
T  19644316 ggggaactcaaaaattgtattggatgagggttttggaggatttatatgaattttttcaaattcaatctatgttgt 19644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 38137923 - 38138029
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaa-ctaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||||| ||  ||| ||||||||||||||| | || |||| ||||||||||  ||||| ||||| | | |||||||||||||||||||||||||    
T  38137923 tttttcttcataatacaaaatcctcctcatttgggggagctcaaaatttgtattggaggagggtattggaaggtctatatgaattcttcaaatttaatct 38138022  T
Q  202 atgttgt 208  Q
    |||||||    
T  38138023 atgttgt 38138029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 23551640 - 23551744
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||||||| ||  || |||||||||||| |||||||||||  |||||||||| | | |||||| ||| ||||||||||||||| ||||||| ||||    
T  23551640 tttttcttcataatacaaagccctcctcattttgggaactaaaaggttgtattggaga-gagttttgaagggtttatatgaattctttaaatttattcta 23551738  T
Q  203 tgttgt 208  Q
    ||||||    
T  23551739 tgttgt 23551744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 31891301 - 31891374
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| |||||||  || ||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  31891301 ggggaactaaaaacttgtatttaaagaggattttggagagtttatatgaattcttcaaatttaatctatgttgt 31891374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 46442649 - 46442757
Alignment:
Q  59 agaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| ||||| | |||||| ||||| ||||| |||||||||  ||||||| ||  ||| |||| ||||||||||| |||||||||||| |||||    
T  46442649 agaaatagaggaaaatgggaggggagggcttcggggggttaactttt--cttcataatacaaaatcctcatcatttggggagctaaaaaattgttttgga 46442746  T
Q  159 aaagggttttg 169  Q
    |||||| ||||    
T  46442747 aaaggggtttg 46442757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 31055374 - 31055424
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  31055374 aaaccctcctcatttggggaactaaaaaattgtattggaggagggttttgg 31055424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 5968118 - 5968036
Alignment:
Q  127 cctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| |||| |||||||||||| |   |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  5968118 cctcatttgggggaactcaaaaattgtattaggggagggttatggagggtttatatgaatttttcaaattcaatctatgttgt 5968036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 30081360 - 30081466
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||| | ||  ||||||| |||| |||| |||||||||||||||||| ||     ||||||||||| ||||| ||||||||||||||||||| |    
T  30081360 tttttcttcaaaataaaaaacccttctcacttggaggaactaaaaaattgtatcggtggtaggttttggagggtttatgtgaattcttcaaatttaatat 30081459  T
Q  202 atgttgt 208  Q
    |||||||    
T  30081460 atgttgt 30081466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 42253868 - 42254008
Alignment:
Q  27 aaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccct 126  Q
    |||| |||||||||||| ||| || ||||| ||||||||||| |||||   || ||| |||||| |||| |||||   |||||||||| ||  |||||||    
T  42253868 aaggcttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgagagaggaaggctttagggg-ttaac---tttcttcataatacaaaaccct 42253963  T
Q  127 cctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||| |||||||||||||| ||||| |  ||||||||||    
T  42253964 cctcatttggaggaactaaaaaattatattgaaggagggttttgg 42254008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 30080889 - 30081070
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||| || ||||||||| ||||||||||| ||||| | |||||| || ||   | | |||||  ||||||||||| ||  |||||||| |||||||    
T  30080889 gaaaaaaggaaggagcaagtggaagaaatagaggaaaatgggaggggagggtttgcagaggttaac--ttttcttcataatacaaaaccctcatcatttg 30080986  T
Q  136 -gggaactaaaaaattgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     || ||| |||||||||||||| || |||||||||          |||| ||||||||||||||||| ||||||||||||||||    
T  30080987 aggaaacaaaaaaattgtattgaaagagggttttgggagattttagagggtttatatgaattcttcagatttaatctatgttgt 30081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 30183860 - 30183934
Alignment:
Q  132 tttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||  |||| |||||  ||| ||||||||| ||| ||||||||||||||||| ||||||||||||    
T  30183860 tttggggaactaaaa--ttgttttggaggaggattttggaggctttgtatgaattcttcaaattcaatctatgttgt 30183934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 41471452 - 41471536
Alignment:
Q  124 cctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| |||| |||||||| |  |||  ||||||||||| | |||||| |||||||||||||||||||||||||||    
T  41471452 cctcctcatttgggggaactgaaaaattgcac-ggaggagggttttggaaggtttatacgaattcttcaaatttaatctatgttgt 41471536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 32430000 - 32429933
Alignment:
Q  131 atttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||| ||||| ||||||||| | | ||||| |||| |||||||||||||||||||||||||    
T  32430000 atttggggaactcaaaaaatgtattggaga-gagtttttgagggtttatatgaattcttcaaatttaat 32429933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 374596 - 374549
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  374596 agggttttggagaatttatatgaattgttccaatttaatctatgttgt 374549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 32820306 - 32820227
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttg---------gaggatttatatgaattcttcaaattt 196  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||         |||||||||||||||||||||||||||    
T  32820306 tcctcgtttggggaactaaaaagttgtattggagaagggttttgtgggttttggaggatttatatgaattcttcaaattt 32820227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 4788100 - 4788034
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttg 169  Q
    |||||||||||| ||  ||| | |||| ||||||||||||||||||||||||||||  |||||||||    
T  4788100 tttttcttcataatataaaatcatccttatttggggaactaaaaaattgtattggagtagggttttg 4788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 17818241 - 17818384
Alignment:
Q  53 agtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattg 151  Q
    |||| |||||||||||| |||||  ||||||   ||||||||||| |||||||  ||||| | ||  |||||||| |||||| | |||||||||||||||    
T  17818241 agtggaagaaatagagagaaatatgaggggactactttgggggtt-aactttt--cttcagaatacaaaaccctcatcatttagaggaactaaaaaattg 17818337  T
Q  152 tattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||          ||||| |||| |||||||||||||||||||||||||||||    
T  17818338 tattgga----------ggagggtttagatgaattcttcaaatttaatctatgttgt 17818384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 45510376 - 45510434
Alignment:
Q  144 aaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||| |||||||  ||||||||||||| |||| | |||||||||||||||||||||    
T  45510376 aaaaattatattggatgagggttttggagggtttagacgaattcttcaaatttaatcta 45510434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 4125861 - 4125985
Alignment:
Q  30 gtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcct 129  Q
    |||| ||||||||  |||||||||||| ||||||| ||| |||||   || ||| |||| | |||| |||||  ||||||||||| || |||| ||||||    
T  4125861 gtttaggaaaaaaagaatgagcaagtggaagaaattgaggaaaatgagagaggagggctatagggg-ttaac--ttttcttcataatactaaatcctcct 4125957  T
Q  130 catttggggaactaaaaaattgtattgga 158  Q
    ||||| |||||||||| ||||||||||||    
T  4125958 cattt-gggaactaaacaattgtattgga 4125985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 10591920 - 10591887
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||||||||    
T  10591920 tttatatgaattcttcaaatttaatctatgttgt 10591887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 13697264 - 13697321
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaaattgtattggaa 159  Q
    |||||||||||| ||  ||||||||||||||| ||||||||||||| |||||||||||    
T  13697264 tttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggaa 13697321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 35264953 - 35264875
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||| ||||||||||||||||||||||||||||||          ||||| |||||||||||| |||||||||||| ||||||||    
T  35264953 aaacactcttcatttggggaactaaaaaattgtattgga----------ggagggtttatatgaatttttcaaatttaatttatgttgt 35264875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 44858198 - 44858149
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgta 153  Q
    |||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  44858198 ttttcttcataaaactaaaccctcctcattgggggaactaaaaaattgta 44858149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 3892700 - 3892780
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttggg-ggtttaactttt 105  Q
    ||||| || ||||||||| ||||||||| || ||||||||||||||||| | |||||| || |||||| || |||||||||    
T  3892700 gaaggcttaggaaaaaaggaatgagcaaatgtaagaaatagagaaaaatgggaggggagggatttgggagggttaactttt 3892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 7391507 - 7391436
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggat 175  Q
    |||||||||| | ||  |||||||||| |||||||||||||||||| |||||||||  |||||||||| ||||    
T  7391507 tttttcttcaaaatataaaaccctccttatttggggaactaaaaaa-tgtattggatgagggttttgggggat 7391436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 14676285 - 14676325
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  14676285 ttttggagggtttacatgaattcttcaaatttaatctatgt 14676325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 16568551 - 16568603
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||||| ||||||||||||||||| |||||||| || ||| |||||||||||    
T  16568551 gggttttagaggatttatatgaatttttcaaattcaacctacgttgtgatgat 16568603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 16597111 - 16597059
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||||| ||||||||||||||||| |||||||| || ||| |||||||||||    
T  16597111 gggttttagaggatttatatgaatttttcaaattcaacctacgttgtgatgat 16597059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 43741329 - 43741433
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    ||||| |||||| ||  ||||| || |||||||||| ||||||||| ||||||||||  |  ||||||||   |||||| |||||||| |||||||||||    
T  43741329 ttttttttcataatacaaaaccttcatcatttggggtaactaaaaagttgtattggaggaatgttttggattgtttatacgaattctttaaatttaatct 43741428  T
Q  202 atgtt 206  Q
    |||||    
T  43741429 atgtt 43741433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 17884356 - 17884187
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggt-ttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    |||||||| |||||||||||| |||||| ||||  |||| | ||| || |||||||||||  ||||  |||||||||||| ||  ||||  | || ||||    
T  17884356 gaaaaaagaaatgagcaagtgtaagaaagagagttaaatgggaggagagggctttgggggggttaa--tttttcttcataatacaaaac--ttcttattt 17884261  T
Q  135 ggggaactaaaaaattgtattggaaaag---------ggttttggaggatttatatgaattcttcaaatttaat 199  Q
    | ||||||||||||||||||||||  ||         ||||||||| | |||||||||||||||||||||||||    
T  17884260 gaggaactaaaaaattgtattggaggagggctttgttggttttggacggtttatatgaattcttcaaatttaat 17884187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 39856440 - 39856369
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaattta 197  Q
    ||||||||| || ||||||||| ||||||||||  || ||||| ||   |||||||||||||||||||||||    
T  39856440 tcctcatttcggaaactaaaaagttgtattggatgagagttttagaatgtttatatgaattcttcaaattta 39856369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 42254019 - 42254066
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  42254019 agggttttggagggttaataagaattcttcaaatttaatttatgttgt 42254066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 44720104 - 44720155
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaatt 186  Q
    |||||||| |||||||||||||||  |||||| |||||| ||||||||||||    
T  44720104 ggggaactcaaaaattgtattggaggagggttatggagggtttatatgaatt 44720155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 1277998 - 1278036
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  1277998 gagggtttatatgaattcttcaaatttaatatatgttgt 1278036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 34670109 - 34670276
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| || ||||||||  ||||||||||| |||||   |||  | | |||||  || |||||||||  ||||||| ||  ||| ||||||||    
T  34670109 ttgggaaaaaaggaacgagcaagtagaagaaatagaggaaaatgagaggaaacgactttgaagggttaactttt--cttcataatacaaaatcctcctca 34670206  T
Q  132 tttggggaactaaa-aaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatc 200  Q
    ||||||  ||| || |||||||||| ||  ||||||||    |||||||||||||||||| |||||||||    
T  34670207 tttgggtgacttaagaaattgtattagaggagggttttaagagatttatatgaattcttcgaatttaatc 34670276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 41002280 - 41002234
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  41002280 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 41002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 13044212 - 13044245
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||| ||||||||    
T  13044212 tttatatgaattcttcaaatttaatatatgttgt 13044245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 42267023 - 42266990
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  42267023 tttatatgaatgcttcaaatttaatctatgttgt 42266990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 43188910 - 43188955
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||||    
T  43188910 ggttatggagggtttatatgaatttttcaaattcaatctatgttgt 43188955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 45066788 - 45066821
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||| ||||||||||||    
T  45066788 tttatatgaattcttcaaattcaatctatgttgt 45066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 1277920 - 1277976
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaaattgtattgga 158  Q
    |||||||||| | ||  ||||| ||||||||| ||||||||||||||||||||||||    
T  1277920 tttttcttcaaaatataaaaccatcctcattttggggaactaaaaaattgtattgga 1277976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 32650550 - 32650506
Alignment:
Q  30 gtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaat 74  Q
    |||||||||||||  |||||||||||| ||||||||||| |||||    
T  32650550 gtttgggaaaaaaagaatgagcaagtggaagaaatagaggaaaat 32650506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 33187921 - 33187889
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| ||||||||||||||||||||||    
T  33187921 tcctcatttgaggaactaaaaaattgtattgga 33187889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 49183599 - 49183783
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaag----gggatggctttgggggtttaacttttttcttcatagtagtaa 121  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| | ||    |||| ||||||||||| |||||  ||||||||||| || |||    
T  49183599 gaaggtttgggaaaaaaggaatgagcaagtggaagaaatagagaaaaatgggaggggagggagggctttggggggttaac--ttttcttcataatactaa 49183696  T
Q  122 accctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     |||||||||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49183697 tccctcctcatttggagaactaaaaaattgtattagaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgt 49183783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 38639496 - 38639677
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||  ||| || ||||| ||||||||||| ||||| | || ||| || |||||||| |||||||||  ||||||| ||  ||||||    
T  38639496 gaaggcttgggaaaaaaagaataagtaagtggaagaaatagaggaaaatgggagaggaaggttttggggggttaactttt--cttcataatacaaaaccc 38639593  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  38639594 tcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgt 38639677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 37674314 - 37674136
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| || ||||||||| |||||||| || ||||| | || ||| ||||||||||| |||||  ||||||||||  ||  ||||||    
T  37674314 gaaggcttgggaaaaaaggaacgagcaagtggaagaaataaaggaaaatgggagaggagggctttggggggttaac--ttttcttcatgatacaaaaccc 37674217  T
Q  126 tcctca-tttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||| |||||||||||||||||||||   ||||||||||||| || ||| ||||| |||||||||||||||||||||    
T  37674216 tcctcattttgaggaactaaaaaattgtattgg---agggttttggagggttaataagaatttttcaaatttaatctatgttgt 37674136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 53664773 - 53664592
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  |||||   || ||| | ||||| ||| |||||||||  ||||||| ||  ||||||    
T  53664773 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgagagaggaggactttgaggggttaactttt--cttcataatacaaaaccc 53664676  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||  |||||||| |||| || ||| |||||||||||||||||| ||||||||    
T  53664675 tcctcatttggaggaactaaaaaattgtattggaggagggttttcgagggttaataagaattcttcaaatttaatttatgttgt 53664592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 35989102 - 35989204
Alignment:
Q  106 ttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||||||||| |    
T  35989102 ttcttcataatattaaaccctcctaatttggggaactaaaaaattgtattagaggagagttttgaaggatttatatgaattcttcaaatttaatctatat 35989201  T
Q  206 tgt 208  Q
    |||    
T  35989202 tgt 35989204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 47359302 - 47359407
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaa-aattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||||||| || |||||||||||| |||||| |||||||| ||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  47359302 ttttcttcataatactaaaccctcctcgtttgggaaactaaaaaaattgtagtggaggagggttttggagggtttatatgaattcttcaaatttaatcta 47359401  T
Q  203 tgttgt 208  Q
    ||||||    
T  47359402 tgttgt 47359407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 3537125 - 3537302
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt- 134  Q
    |||||||| |||||| ||||| ||||||||||| ||||| | |||||| ||||||||| | |||||  ||||||||||| ||  |||||||||||||||     
T  3537125 gaaaaaaggaatgagtaagtggaagaaatagaggaaaatgggaggggagggctttgggaggttaac--ttttcttcataatacaaaaccctcctcatttg 3537222  T
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatt--------tatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||||||||||||||||||  || ||||||| || ||        ||||||||||||||||||||||||||||||    
T  3537223 ggggaactaaaaaattgtattggaggagagttttgggggtttttagagggtatatgaattcttcaaatttaatctatgtt 3537302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 44400628 - 44400797
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| |||||||||||| |||||||| || ||||| | || ||| ||||||||||||| |||||||  ||||||  ||  |||||||| ||||||||    
T  44400628 aaaaaaggaatgagcaagtggaagaaataaaggaaaatgggagaggagggctttgggggtt-aactttt--cttcatgatacaaaaccctcttcatttgg 44400724  T
Q  137 g-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
      |||||||||||||||||||||  ||||||||| ||| || ||| ||||| |||||||||||||||||||||    
T  44400725 acgaactaaaaaattgtattggaggagggttttgtagggttaataagaatttttcaaatttaatctatgttgt 44400797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 50535266 - 50535108
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt- 134  Q
    |||||||| ||||||||| |  ||||||||||| |||||  || || | ||||||| ||| ||||||||   ||||||| || ||||||||||||||||     
T  50535266 gaaaaaaggaatgagcaaatagaagaaatagaggaaaatgaaaaggaaaggctttgaggggttaacttta--cttcataatactaaaccctcctcattta 50535169  T
Q  135 ggggaactaaaaaattgtattggaaaagggtttt-ggaggatttatatgaattcttcaaat 194  Q
    |||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||    
T  50535168 ggggaactaaaaaattgtattggagaaggatttttggagggtttatatgaattcttcaaat 50535108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 33944813 - 33944671
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  33944813 gaaggcttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggg-ttaac--ttttcttcataatacaaaaccc 33944717  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  33944716 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 33944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 78 - 207
Target Start/End: Complemental strand, 40119006 - 40118881
Alignment:
Q  78 aggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatt 176  Q
    |||||| ||||||||||| ||||  |||||||||||   |  ||||||||||||||||||| ||||||||||||||||||||   |||||||||||| ||    
T  40119006 aggggagggctttggggggttaa--tttttcttcattaaacaaaaccctcctcatttgggggaactaaaaaattgtattgga---gggttttggagggtt 40118912  T
Q  177 tatatgaattcttcaaatttaatctatgttg 207  Q
    | ||||||||||||||||||| |||||||||    
T  40118911 tgtatgaattcttcaaatttattctatgttg 40118881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 25754268 - 25754095
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||| ||||||| ||| || ||||||||||||||||| | ||| | || ||| ||||||||||  || ||  ||||||||||| ||  ||||||||||||    
T  25754268 ttggaaaaaaaggaataagtaagtgaaagaaatagaggataatgggagaggagggctttgggg--ttgac--ttttcttcataatacaaaaccctcctca 25754173  T
Q  132 tttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||||||  ||| |||||| || || ||| ||||||||| |||||||| ||||||||    
T  25754172 tttggaggaactaaaaaattgtattggaggaggattttggggggttaataagaattcttcgaatttaatttatgttgt 25754095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 33909121 - 33908980
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||| ||||||| |||||||||||| ||||||||||| ||||| | |  ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  33909121 gaaggtttgg-aaaaaaggaatgagcaagtggaagaaatagaggaaaatggga-aggagggctttgggggattaac--ttttcttcataatacaaaaccc 33909026  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||    
T  33909025 tcctcatttggggaaactaaaaagttgtattggaggagggttttgg 33908980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 1133024 - 1132921
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||| ||||||| ||  |||| |||||||||| |||||||| |||||||||||||||  ||||||||||||| |||| |||||||||| |||||||||||    
T  1133024 ttttacttcataatacaaaactctcctcattttggggaactcaaaaattgtattggaggagggttttggagggtttacatgaattctttaaatttaatct 1132925  T
Q  202 atgt 205  Q
    ||||    
T  1132924 atgt 1132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 45571085 - 45570986
Alignment:
Q  58 aagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaaattgtattg 156  Q
    ||||||||||| ||||| |||||||| |||| |||||| || |  |||||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  45571085 aagaaatagaggaaaatggaaggggagggctatggggggttca--tttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgtattg 45570988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 48370253 - 48370172
Alignment:
Q  128 ctcatttggggaactaaaaaattgtattggaaaagggttttgg-aggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| ||||||||||| ||| |||| |||||| |||||||||||||||| |||||||||||| ||||||||    
T  48370253 ctcatttggggaactcaaaaattgtatcggagaaggattttgggaggatttatatgaatttttcaaatttaatttatgttgt 48370172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 51686490 - 51686604
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaa 193  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||  |          |||||||||||| |||||||||||| ||||||    
T  51686490 ttttcttcataatactaaacccccctcatttggggaactaaaaaattgtattggaggagggtttttgggggttttggagggtttatatgaatttttcaaa 51686589  T
Q  194 tttaatctatgttgt 208  Q
    |||||| ||||||||    
T  51686590 tttaatttatgttgt 51686604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 206
Target Start/End: Original strand, 27197167 - 27197348
Alignment:
Q  33 tgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcat 132  Q
    ||||||||||  |||||||||| | || |||||||| ||||| | |||||| || |||||||||| |||| ||  ||||||| ||  |||||||||||||    
T  27197167 tgggaaaaaatgaatgagcaaggggaaaaaatagaggaaaatgggaggggagggttttgggggtt-aactatt--cttcataatacaaaaccctcctcat 27197263  T
Q  133 ttggggaact-aaaaaattgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||| |||||| ||||||||||||||||  |||||||||          |||| ||||||||||||||||||||||||| ||||||    
T  27197264 ttgaggaactaaaaaaattgtattggatgagggttttggggtttttttgagggtttatatgaattcttcaaatttaatttatgtt 27197348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 2420677 - 2420757
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||| ||||||||||||||  | | |||||||||| |||||||||||| |||||||| ||||||||||||    
T  2420677 cctcatttggggaactcaaaaattgtattgggga-gagttttggagggtttatatgaatttttcaaattcaatctatgttgt 2420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 34306623 - 34306696
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| ||||||||||||||   ||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  34306623 ggggaactcaaaaattgtattgggggagggttttggagggtttatatgaatttttcaaattcaatctatgttgt 34306696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 50948112 - 50948254
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttggg-ggtttaacttttttcttcatagtagtaaacc 124  Q
    |||||||| ||||||||| |||||||| ||| ||||||||||  ||||| | || ||| |||||| || || |||||||||  ||||||| ||  |||||    
T  50948112 gaaggtttaggaaaaaaggaatgagcatgtggaagaaatagaagaaaatgggagaggagggcttttggagggttaactttt--cttcataatacaaaacc 50948209  T
Q  125 ctcctcatttgg-ggaactaaaaaattgtattggaaaagggtttt 168  Q
    ||||||| |||| ||||||||||||||||||||||  ||||||||    
T  50948210 ctcctcagttggaggaactaaaaaattgtattggaggagggtttt 50948254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 52620903 - 52620818
Alignment:
Q  124 cctcctcatttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||| ||||| |||||||||||||||  |||||||||  || || |||||||||||||||||||||| ||||||||    
T  52620903 cctcctcatttgggagaactcaaaaattgtattggaggagggttttgaggggttaatatgaattcttcaaatttaatatatgttgt 52620818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 5939949 - 5939812
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| |||||||||||| ||||||||||| ||||| | ||  || || |||||||| |||||  ||||||||||| ||  ||| | ||||||    
T  5939949 ttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggagatgaaggttttggggggttaac--ttttcttcataatacaaaatcttcctca 5939852  T
Q  132 tttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||| ||||||| |||| |||||||||  ||||||||||    
T  5939851 tttggaggaactacaaaactgtattggaggagggttttgg 5939812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 29623156 - 29623334
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| || ||||||||| ||||||||||| | | ||| |||||| |||||||  |||| |   |||||||||||| ||  |||||||||||||||||    
T  29623156 aaaaaaggaaggagcaagtggaagaaatagaggacattaggaggggagggctttgatggttaa---tttttcttcataatacaaaaccctcctcatttgg 29623252  T
Q  137 ggaactaaaaaattgtattggaaaagggtttt----------ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    | |||| |||| |||||||| |  ||||||||          ||||| ||||||||||||||||||||||||| ||||||||    
T  29623253 gaaactcaaaagttgtattgcaggagggttttgaggggtttaggagggtttatatgaattcttcaaatttaatatatgttgt 29623334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 24588382 - 24588276
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||||| ||  ||| || |||||||||| |||||| ||||||||||||||   | ||||||||||| |||| ||||||||||||||||  ||||    
T  24588382 tttttcttcataatacaaaatccccctcatttggaggaactcaaaaattgtattgggggatggttttggagggtttaaatgaattcttcaaattccatct 24588283  T
Q  202 atgttgt 208  Q
    |||||||    
T  24588282 atgttgt 24588276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 16883337 - 16883443
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttt---tggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||| ||  ||| ||||||| |||||| ||| ||||||||||||||||   ||||||   || ||  |||||||||||||||||||||||||    
T  16883337 tttttcttcataataccaaatcctcctcgtttgggaaacaaaaaaattgtattggag--gggtttgattgaagattttatatgaattcttcaaatttaat 16883434  T
Q  200 ctatgttgt 208  Q
    |||||||||    
T  16883435 ctatgttgt 16883443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 2927868 - 2927929
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaattta 197  Q
    |||||||||||||||||||||||| | |||||||| || |||||||||| |||| |||||||    
T  2927868 gggaactaaaaaattgtattggaagatggttttggggggtttatatgaactctttaaattta 2927929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 11500086 - 11500142
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggg-gaactaaaaaattgtattgga 158  Q
    |||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||||    
T  11500086 tttttcttcataatagaaaaccctcctcatttgggataactaaaaaattgtattgga 11500142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 22225274 - 22225413
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||| ||||| ||||||  |||||| || || || |||||||| ||||||| ||| ||  |||||| ||||| |   |||||||||||| || ||||| |    
T  22225274 gaagatttggtaaaaaaagaatgagtaaatggaacaaatagaggaaaataggaggagagagctttgagggttaa---tttttcttcataatactaaactc 22225370  T
Q  126 tcctcattt-ggggaactaaaaaattgtattggaaaagggttt 167  Q
    ||||||||| |||||||||||||||| ||||||| ||| ||||    
T  22225371 tcctcatttaggggaactaaaaaattatattggagaagagttt 22225413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 170
Target Start/End: Complemental strand, 48909021 - 48908905
Alignment:
Q  52 aagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaatt 150  Q
    ||||| ||||||||||| ||||| | || ||| ||||||||||||| |||||||  ||||||| ||  |||||||| | |||||| ||||||||||||||    
T  48909021 aagtggaagaaatagaggaaaatgggagaggaaggctttgggggtt-aactttt--cttcataatacaaaaccctcataatttggaggaactaaaaaatt 48908925  T
Q  151 gtattggaaaagggttttgg 170  Q
     |||||||  ||||||||||    
T  48908924 atattggaggagggttttgg 48908905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 35283054 - 35283185
Alignment:
Q  86 gctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattgga----------aaagggttttggagga 174  Q
    |||||||||| ||||  |||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||||           | |||||| |||||     
T  35283054 gctttggggggttaa--tttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggaaggttttgaggggtttgggaggg 35283151  T
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||| ||||||| ||||||||    
T  35283152 tttatatgaattcttcatatttaatatatgttgt 35283185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 48444489 - 48444556
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||| | ||  ||||| |||||||||||||| ||||||||||||||||||  ||||||||||    
T  48444489 tttttcttcaaaatataaaaccttcctcatttggggatctaaaaaattgtattggatgagggttttgg 48444556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 53888539 - 53888585
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  53888539 gggtttgggagggtttatatgaattcttcaaatttaatatatgttgt 53888585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 31178276 - 31178231
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||    
T  31178276 gggttatggaggatttatatgaatttttcaaattcaatctatgttg 31178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 33281770 - 33281709
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaa 198  Q
    |||||| |||||||||||||||| ||| |||||  || |||| |||||||||||||||||||    
T  33281770 ggaactcaaaaattgtattggaagaggattttgaggggtttaaatgaattcttcaaatttaa 33281709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 517780 - 517663
Alignment:
Q  49 agcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaa 147  Q
    |||||||| ||||||||||| ||||||| || | | ||||||||||  ||||  |||||||||||| ||  ||||||||||||||| ||||||||  |||    
T  517780 agcaagtggaagaaatagaggaaaataggagagaagggctttgggg--ttaa--tttttcttcataatacaaaaccctcctcatttgggggaact-caaa 517686  T
Q  148 attgtattggaaaagggttttgg 170  Q
    ||||||||| |  ||||||||||    
T  517685 attgtattgaaggagggttttgg 517663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 39115009 - 39114949
Alignment:
Q  146 aaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||||||||  |||  ||| |||| ||||||||||||||||||||| ||||||||||    
T  39115009 aaattgtattggaggaggactttagagggtttatatgaattcttcaaattcaatctatgtt 39114949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 47714842 - 47714701
Alignment:
Q  30 gtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcct 129  Q
    ||||| |||||||| || ||||||||| ||||||||||  | | | ||||| || |||||||| |||| |  ||||||  ||||| ||  ||| |  |||    
T  47714842 gtttgagaaaaaaggaaggagcaagtggaagaaatagaagacattggaaggagagggctttggaggttaa--ttttttactcataataaaaaatctccct 47714745  T
Q  130 catttggggaactaaaaaattgtattggaaaagggttttggagg 173  Q
    ||||||||||||| ||||||||||||||   |||||||||||||    
T  47714744 catttggggaactcaaaaattgtattgggggagggttttggagg 47714701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 3458384 - 3458329
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| | ||  ||||| ||||| |||||||||||||||||||||||||||    
T  3458384 tttttcttcaaaatataaaaccgtcctcgtttggggaactaaaaaattgtattgga 3458329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 7661087 - 7661134
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  7661087 agggttatggaggatttatatgaatttttcaaattcaatatatgttgt 7661134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 32858882 - 32858925
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||||||| |||| |||||||| |||||||||||||||||    
T  32858882 gggttttggagggtttacatgaattcatcaaatttaatctatgt 32858925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 42155980 - 42155941
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  42155980 tttatatgaatttttcaaatttaatatatgttgtgatgat 42155941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 46175295 - 46175256
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  46175295 ggagaatttatatgaattctttaaatttaatctatgttgt 46175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 47434350 - 47434303
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47434350 agggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47434303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 47714703 - 47714656
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47714703 agggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47714656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 54372606 - 54372559
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||| ||||||||||||||||||||| | ||||||||||    
T  54372606 agggttttagagggtttatatgaattcttcaaattcagtctatgttgt 54372559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 7435712 - 7435658
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||  ||| ||||||||| ||| |||||||||||||||||||||    
T  7435712 ttttcttcataatataaaatcctcctcatctggagaactaaaaaattgtattgga 7435658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 19148219 - 19148265
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||| ||||||||||| ||||||||||||| ||||||||    
T  19148219 gggtttgggagggtttatatgaatgcttcaaatttaatttatgttgt 19148265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 28569540 - 28569510
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||||||||||||||||||||||||||    
T  28569540 tttatatgaattcttcaaatttaatctatgt 28569510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 36637864 - 36637898
Alignment:
Q  174 atttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||| ||||||||    
T  36637864 atttatatgaattcttcaaatttaatatatgttgt 36637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 39499250 - 39499296
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  39499250 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 39499296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 46891446 - 46891484
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  46891446 gaggatttatataaattcttcaaatttaatatatgttgt 46891484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 47789475 - 47789429
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47789475 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 50345745 - 50345679
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttg 169  Q
    |||||||||| | ||  |||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  50345745 tttttcttcaaaatataaaacactcctcgtttggggaactaaagaattgtattggatgagggttttg 50345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 51684537 - 51684599
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggg 94  Q
    |||||||||||| ||||| |||||| ||||||||||| |||||   |||||| ||||||||||    
T  51684537 ttgggaaaaaaggaatgaacaagtggaagaaatagaggaaaatgagaggggagggctttgggg 51684599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 54878037 - 54877995
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||    
T  54878037 agggttttgaagggtttatataaattcttcaaatttaatctat 54877995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 1339924 - 1339887
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctat 203  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  1339924 tttgaaggatttacatgaattcttcaaatttaatctat 1339887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 7302068 - 7302136
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggag 172  Q
    |||||||||||||||  ||| ||| |||||||| | |||| ||||||||||||| || ||||||||||||    
T  7302068 tttttcttcatagtacaaaatccttctcatttgag-aactcaaaaattgtattgaaagagggttttggag 7302136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 21835630 - 21835703
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| |||||||| |  |||||||||| ||||||  || | || ||||||| |||||||||||||    
T  21835630 ggggaactaaaaatttgtattgaaggagggttttgggggatttggataagtttttcaaatctaatctatgttgt 21835703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 17642596 - 17642640
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattggaaaagggttttgga 171  Q
    |||||||||||||||| ||||||||||| |||  |||||||||||    
T  17642596 cctcatttggggaactcaaaaattgtatcggatgagggttttgga 17642640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 27055927 - 27055887
Alignment:
Q  168 tggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  27055927 tggagggtttatatgaatttttcaaattcaatctatgttgt 27055887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 30995852 - 30995932
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaa-attgtattggaaaaggg-ttttggaggatttatat 181  Q
    |||||||||||| ||  |||| || ||||||||||||||||||||  ||||||| || ||||| ||||||||| |||||||    
T  30995852 tttttcttcataatacaaaactctactcatttggggaactaaaaattttgtatttgagaagggtttttggaggttttatat 30995932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 37457058 - 37457098
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||| ||||||||| ||||||||||| ||||||||||||||    
T  37457058 ttttagaggatttacatgaattcttcgaatttaatctatgt 37457098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 38401975 - 38401911
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    ||||||||||||||||||||||||  || || || || | ||| ||| |||||||||||||||||    
T  38401975 ggggaactaaaaaattgtattggatgagagtcttagaaggtttgtataaattcttcaaatttaat 38401911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 53888469 - 53888537
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||| | ||  ||||||||||  ||||||| ||||||||||||||||||||  ||||||||||    
T  53888469 tttttcttcaaaatataaaaccctccttgtttgggggaactaaaaaattgtattggaggagggttttgg 53888537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 38568546 - 38568360
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatgg-----ctttgggggtttaacttttttcttcatagtagta 120  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||||| | |||||| ||     ||||||||| |||||||||  ||||||| || ||    
T  38568546 gaaggcttgggaaaaaaggaatgagcaagtgaaagaaatagaggaaaatgggaggggaggggagggctttggggggttaactttt--cttcataatacta 38568449  T
Q  121 aaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||| |||||||||||| |||||||  |||||||||| || ||||||||||||||||||||||||||||||||||    
T  38568448 aaccctcctcatttgggggaactaaaaaattatattggaggagggttttggggggtttatatgaattcttcaaatttaatctatgttgt 38568360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 14570214 - 14570033
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||||| |||||| | ||||||||| ||||| | |||||| |||||||| || |||||||||  ||| ||| || |||||||    
T  14570214 gaaggcttgggaaaaaaggaatgaccaagtggacgaaatagaggaaaatgggaggggagggctttggagggttaactttt--ctttataatactaaaccc 14570117  T
Q  126 tcctcatttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| ||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  14570116 tcctcatttgggagaactaaaaaattatattggagtagggttttggagggtttatatgaattcttcaaatttaatctaagttgt 14570033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 10437893 - 10438073
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||||| | |||||| | ||||||||| |||||  ||||||| ||| ||  ||| ||    
T  10437893 gaaggcttgggaaaaaaggaatgagcaagtggaagaaatagagaaaaatgggaggggaggtctttggggggttaac--ttttctttataatacaaaatcc 10437990  T
Q  126 tcctcattt-ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||||| | ||||||||||| ||||||||||  ||||||||||||| || |||| |||||||||||||||||||||||||    
T  10437991 tcctcatttagaggaactaaaaagttgtattggaggagggttttggagggttaatatcaattcttcaaatttaatctatgttg 10438073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 5772893 - 5772713
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||  |||||||||||| ||||||||||  ||||| | || ||| ||||||||||||| |||||||  ||||||| ||  ||||||    
T  5772893 gaaggcttaggaaaaaaagaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttgggggtt-aactttt--cttcataatacaaaaccc 5772797  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| |||| |||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  5772796 tcctcatttggaggaattaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgt 5772713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 18675886 - 18675708
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||||| |||||| ||||||||||| ||||  |  ||||| |  |||| | | |||| ||||  |||| || || |||| ||    
T  18675886 gaaggcttgggaaaaaaggaatgaccaagtggaagaaatagaggaaaacgggcggggaggattttgagaggttaaatttt--cttcgtaatactaaatcc 18675789  T
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    | ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  18675788 ttctcatttggggaactaaaagattatattggagaagggttttggagggtttatatgaattcttcgaatttaatctatgtt 18675708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 10842952 - 10843132
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||||| |||||||  ||||||| ||  ||||||    
T  10842952 gaaggcttgagaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggctttgggggtt-aactttt--cttcataatacaaaaccc 10843048  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| |||||||||||||||||||| |  | |||||||| || || ||| |||||||||||||||||| ||||||||    
T  10843049 tcctcatttggaggaactaaaaaattgtattgaaggacggttttggggggttaataagaattcttcaaatttaatttatgttgt 10843132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 19389912 - 19389814
Alignment:
Q  107 tcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||| ||  ||| |||||||||||||||||||||||||||||||||||  ||| ||||||||| |||| ||||||||||||||||||||||||||    
T  19389912 tcttcataatacaaaatcctcctcatttggggaactaaaaaattgtattggaggaggattttggagggtttacatgaattcttcaaatttaatctatgt 19389814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 3925857 - 3925774
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||||||||  || |||||||| ||||||||| |||||||||||||| |||||||||||    
T  3925857 ctcctcatttggggaactaaaaaattgtattggatgagagttttggacgatttatataaattcttcaaatttgatctatgttgt 3925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 35683647 - 35683516
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||| ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||| ||||| |||||  ||||||||||| ||  ||||||    
T  35683647 gaaggtttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggcttcggggggttaac--ttttcttcataatacaaaaccc 35683550  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||||||||||||||||||||||    
T  35683549 tcctcatttggaggaactaaaaaattgtattgga 35683516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 8943967 - 8944143
Alignment:
Q  39 aaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-g 137  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||  |||||| ||| ||||| ||||  |||||| || |||||| ||||||||||| |    
T  8943967 aaaaggaatgagcaagtgaaagaaatagaggaaaatagaaggggagagctttgaggggttaacctttt--ttcataatactaaaccttcctcatttggag 8944064  T
Q  138 gaactaaaaaattgtattggaaaa---------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||| |||  |         |||||||||| | | ||||||||||||||||||||||| ||||||||    
T  8944065 gaact-aaaaattgtatcggatgagggtttttggggttttggaaggtgtatatgaattcttcaaatttaatatatgttgt 8944143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 35708852 - 35708745
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtattggaaaagggttttgg-aggatttatatgaattcttcaaatttaatc 200  Q
    |||||||||| ||||  ||| |||||||||||| |||||||||||||||||| ||||  |||||||||| | | |||||||||||||||||||||||||     
T  35708852 tttttcttcaaagtataaaatcctcctcatttgagggaactaaaaaattgtactggaggagggttttgggaaggtttatatgaattcttcaaatttaata 35708753  T
Q  201 tatgttgt 208  Q
    ||||||||    
T  35708752 tatgttgt 35708745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 3676571 - 3676499
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    |||||| |||||||||||||||||  ||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  3676571 ggggaaataaaaaattgtattggaggaggattttgaagggtttatatgaattcttcaaatttaatctatgttg 3676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 43497023 - 43496864
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| ||| ||||||||||||||||| || ||||| | || ||| ||||||||||||| |   |||||||| ||| ||  |||| || |||||||    
T  43497023 ggaaaaaag-aatcagcaagtgaaagaaataaaggaaaatgggagaggagggctttgggggttaa---tttttcttaataatacaaaactctgctcattt 43496928  T
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||||||||||          ||||| ||||||||||||||||||||||||| ||||||||    
T  43496927 ggggaacttaaaaattgtattgga----------ggagggtttatatgaattcttcaaatttaatttatgttgt 43496864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 10955845 - 10955733
Alignment:
Q  45 aatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt-ggggaacta 143  Q
    |||||||||||| ||||||||||||||||| ||| | |  ||||||||||| |||||  ||||| ||||| ||  ||||||||||||||| |||||||||    
T  10955845 aatgagcaagtggaagaaatagagaaaaatggaaagagggggctttggggggttaac--ttttcatcataatacaaaaccctcctcatttgggggaacta 10955748  T
Q  144 aaaaattgtattgga 158  Q
    ||| |||||||||||    
T  10955747 aaagattgtattgga 10955733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 39649489 - 39649609
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| |||||||||||| |||||||| |  ||||| | || ||| ||||||||||| |||||  ||||||||||  ||  |||||||||||||||||    
T  39649489 aaaaaaggaatgagcaagtggaagaaataaatgaaaatgggagaggagggctttggggggttaac--ttttcttcatgatacaaaaccctcctcatttgg 39649586  T
Q  137 -ggaactaaaaaattgtattgga 158  Q
     ||||||||||||||||||||||    
T  39649587 aggaactaaaaaattgtattgga 39649609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 29799629 - 29799733
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggagga-tttatatgaattcttcaaatttaatct 201  Q
    |||||||||| | ||  |||||||| | || ||||||||||||||| |||||||||  ||||||||||| || ||||||| ||||||||||||||||| |    
T  29799629 tttttcttcaaaatataaaaccctctttatgtggggaactaaaaaactgtattggatgagggttttggaagagtttatataaattcttcaaatttaatat 29799728  T
Q  202 atgtt 206  Q
    |||||    
T  29799729 atgtt 29799733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 15974256 - 15974372
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| | |||||||||| ||||||||||||||||| | |||| | |||||||| || |||||  ||||||||||| || || || ||||||||||    
T  15974256 ggaaaaaagaattgagcaagtggaagaaatagagaaaaatgggagggaaaggctttggagggttaac--ttttcttcataatactatactctcctcattt 15974353  T
Q  135 g-gggaactaaaaaattgt 152  Q
    | | |||||||||||||||    
T  15974354 gagagaactaaaaaattgt 15974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 37909020 - 37909089
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||| ||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  37909020 aactcaaaagttgtattggaggagggttttggagggtttatatgaattcttcaaattcaatctatattgt 37909089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 13294051 - 13293967
Alignment:
Q  124 cctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||  | |||| |||||||||||||||  ||||| ||||||| |||||||| ||||||||| |||||||| ||||||    
T  13294051 cctcctcatttaagaaacttaaaaattgtattggaggagggtcttggagggtttatatgtattcttcaagtttaatctctgttgt 13293967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 41923180 - 41923256
Alignment:
Q  132 tttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||||||| ||||||| | ||| ||  ||||| ||| ||||||||||||||||||||||||||||||||||    
T  41923180 tttgaggaactaaacaattgtactagaagagaattttgaagggtttatatgaattcttcaaatttaatctatgttgt 41923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 9096334 - 9096401
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||| || ||||||||||||  ||| ||||||||| ||||||||||||||||||||| ||||||    
T  9096334 ggggaactcaacaattgtattggaggaggattttggagggtttatatgaattcttcaaattcaatcta 9096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 9684879 - 9684780
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||||||| ||  ||||||||||||||||||| || |||||||||| |||| |  | |||||||| || |||| ||||||||||||||| |||||||    
T  9684879 ttttcttcataatacaaaaccctcctcatttgggggaattaaaaaattgcattgaaggaaggttttggggggtttacatgaattcttcaaatctaatcta 9684780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 39549950 - 39549890
Alignment:
Q  143 aaaaaattgtattggaaaagggttttggagga--tttatatgaattcttcaaatttaatct 201  Q
    ||||||||||||| ||||| ||||||||||||  |||||||||||| ||||||||||||||    
T  39549950 aaaaaattgtattagaaaatggttttggaggatttttatatgaatttttcaaatttaatct 39549890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 6373137 - 6373241
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtatt---ggaaa-------agggttttggaggatttatatgaattcttcaaatttaatctatgttgtg 209  Q
    ||||||||||||||||||||||||||||||||||||   |||||        |||||| ||||| |||||||||||| || ||||||||| ||||||||     
T  6373137 aaaccctcctcatttggggaactaaaaaattgtattcgaggaaagttttggggggtttgggagggtttatatgaattttttaaatttaatatatgttgtt 6373236  T
Q  210 atgat 214  Q
    |||||    
T  6373237 atgat 6373241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 13450508 - 13450567
Alignment:
Q  149 ttgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||  ||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  13450508 ttgtattggaggaggattttggaggatttatatgaactcttcaaaattaatttatgttgt 13450567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 35705168 - 35705129
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35705168 ggaggatttatatgaattcttcaaattcaatctatgttgt 35705129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 1935136 - 1935090
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  1935136 gggttttggagggtttatgtgaattcttcaaatttaatatatgttgt 1935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 26149655 - 26149701
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  26149655 gggttatggaggatttatatgaatttttcaaattcaatctatgttgt 26149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 38120250 - 38120177
Alignment:
Q  127 cctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||||||| |||| ||||||||||||||    ||||| |||||| |||||||||||| |||||||||||||||    
T  38120250 cctcatttgggggaactcaaaaattgtattggg---gggttatggagggtttatatgaatttttcaaatttaatcta 38120177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 5088896 - 5088856
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  5088896 ttttggaggatttataggaattcttcaaatttaatttatgt 5088856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 17668160 - 17668120
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  17668160 ttttggagggtttacatgaattcttcaaatttaatctatgt 17668120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 32125325 - 32125269
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatt 195  Q
    ||||||||||||||||||||  ||| |||| |||| ||| |||||||||||||||||    
T  32125325 aactaaaaaattgtattggaggaggattttagagggtttgtatgaattcttcaaatt 32125269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 15974395 - 15974438
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||    
T  15974395 ttttggagggtttatacgaattctttaaatttaatctatgttgt 15974438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 38289364 - 38289411
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||||    
T  38289364 agggttttggagggtttatacgagttcttcaaattcaatctatgttgt 38289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 12150599 - 12150665
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||||||||||||||  ||| |||||| || |||| || |||||| |||||| |||||||    
T  12150599 ggaactaaaaaattgtattggaggaggattttggcgggtttagataaattctccaaattcaatctat 12150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 17092949 - 17092995
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  17092949 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 17092995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 18671041 - 18671079
Alignment:
Q  129 tcatttggggaactaaaaaattgtattggaaaagggttt 167  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  18671041 tcatttgaggaactaaaaaattgtattggagaagggttt 18671079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 27480201 - 27480155
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  27480201 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 27480155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 32750656 - 32750722
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    ||||||||||||| || ||||||  |||||||| ||||  |||||||||||| |||||||| |||||    
T  32750656 ggggaactaaaaatttttattggggaagggtttaggagtgtttatatgaatttttcaaattcaatct 32750722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 37508419 - 37508373
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  37508419 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 37508373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 41638361 - 41638391
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattgg 157  Q
    |||||||||||||||||||||||||||||||    
T  41638361 cctcatttggggaactaaaaaattgtattgg 41638391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 2679902 - 2679869
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| ||||||||||||||||||    
T  2679902 tttatatgaattctttaaatttaatctatgttgt 2679869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 9621957 - 9621924
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||| ||||    
T  9621957 tttatatgaattcttcaaatttaatctatattgt 9621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 10295536 - 10295581
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||||    
T  10295536 ggttatggagggtttatatgaatttttcaaattcaatctatgttgt 10295581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 6491238 - 6491282
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||||    
T  6491238 gtttcggagggtttatatgaattcttcaaatttaacttatgttgt 6491282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 13569417 - 13569461
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  13569417 gttttggaggattaataagaatttttcaaatttaatctaggttgt 13569461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 25026928 - 25026972
Alignment:
Q  127 cctcatttggg-gaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||    
T  25026928 cctcatttgggagaactaaaaaattgtattggggaagggttttgg 25026972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 33682432 - 33682464
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatcta 202  Q
    |||| ||||||||||||||||||||||||||||    
T  33682432 gagggtttatatgaattcttcaaatttaatcta 33682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 39428947 - 39428991
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||| ||||||||||||||||||| ||  ||||||||||    
T  39428947 tcctcatttgaggaactaaaaaattgtattagaggagggttttgg 39428991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 91049 - 90868
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||  |||||||| ||| ||||||| ||||||||||| |||||| ||||||||||| |||||||||  ||||||| ||  ||||||    
T  91049 gaaggcttgggaaaaaaagaatgagcaggtggaagaaattgagaaaaataggaggggagggctttggggggttaactttt--cttcatattacaaaaccc 90952  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||  || |||||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  90951 tcctcattggggataattaaaaaattgtattggaggagggttttggatggtttatatgaattcttcaaatttaatctatgttgt 90868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 31082729 - 31082903
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| |||||||||||| ||||||||||| ||||| | |||||| ||||||||||||| |||||||  |||| || || ||||||||||||     
T  31082729 ttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttgggggtt-aactttt--cttcgtaatactaaaccctcctcg 31082825  T
Q  132 tttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| |||||||| |||||||||||  |||||||||| || ||||||||||||||||||||||||| ||||||||    
T  31082826 tttgggggaactaaaatattgtattggaggagggttttggggggtttatatgaattcttcaaatttaatttatgttgt 31082903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 1364740 - 1364921
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||| |||||||||  ||||||| ||  ||||||    
T  1364740 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaactttt--cttcataatacaaaaccc 1364837  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||| || || ||| |||||||||||||||||| ||||||||    
T  1364838 tcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaatttatgttgt 1364921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 34757512 - 34757655
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| | || ||| ||||||||||| |||||   |||||||||| ||  ||||||    
T  34757512 gaaggtttgggaaaaaaggaatgagcaggtgaaagaaatagagaaaaatgggagaggagggctttggggggttaac--ctttcttcataatacaaaaccc 34757609  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  34757610 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 34757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 6656034 - 6656208
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  |||||||||||||||    
T  6656034 ggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaac--ttttcttcataatacaaaaccctcctcattt 6656131  T
Q  135 gg-ggaactaaa--aaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || |||||||||  |||||||||||||  |||||||||| || || ||| |||||||||||||||||| ||||||||    
T  6656132 ggaggaactaaaacaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaatttatgttgt 6656208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 15555510 - 15555338
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||||| |   |||||||||||| ||  ||||||| |||||||    
T  15555510 ggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttgggggttaa---tttttcttcataatacaaaacccttctcattt 15555414  T
Q  135 gg-ggaactaaaaaattgtattgga-aaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || ||||||||||||||||||||||   |||||||| |||| || ||| |||||||||||||||||| ||||||||    
T  15555413 ggaggaactaaaaaattgtattggagtgagggtttttgagggttaataagaattcttcaaatttaatttatgttgt 15555338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 5322292 - 5322112
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||| ||||||||| || |||| |||| || | |||||| | | | | ||||||  |||||||||||| |   |||||||||||| ||  ||| ||    
T  5322292 gaaggttttggaaaaaaggaaagagctagtggaaaagatagaggacattgggaggggagagctttgggggttca---tttttcttcataatacaaaatcc 5322196  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||    
T  5322195 tcctcatttgggggaactcaaaaactgtattggaaaagggttttggagggtttatatgaattattcaaatttaagcaatgttgt 5322112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 4003344 - 4003506
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||| ||||||||||| ||||| | |||||| ||||||||||| ||||  |||||||||||| ||  |||| ||||||||||    
T  4003344 ggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttaa--tttttcttcataatacaaaactctcctcattt 4003441  T
Q  135 -ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     |||||||| |||||||||||||||          ||||| ||||| ||||||||||||||||||| ||||||||    
T  4003442 gggggaactcaaaaattgtattgga----------ggagggtttatgtgaattcttcaaatttaatttatgttgt 4003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 11514951 - 11515094
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || |||  |||||||||| |||||  ||||||||||| ||  ||||||    
T  11514951 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaac--ttttcttcataatacaaaaccc 11515048  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  11515049 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 11515094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 28539593 - 28539409
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    ||||||||||||||||||||| ||  ||||||||  | ||||| | |||||| |||| |||||  |||||||||  ||||||| |  ||||| |||||||    
T  28539593 ttgggaaaaaagtaatgagcatgtcgaagaaatattggaaaatgggaggggagggctctggggagttaactttt--cttcataatgctaaactctcctca 28539496  T
Q  132 tttggggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| |||||||||||||||||||  |          || ||||||||| ||||||||||||||||||||||||||||||||||    
T  28539495 tttgggggactaaaaaattgtattggatgagagctttgggggattttggagggtttatatgaattcttcaaatttaatctatgttgt 28539409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 39204960 - 39205115
Alignment:
Q  63 atagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt--ggggaactaaaaaattgtattgga-- 158  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||  |||| || ||||||||||||||||  ||||||||||||||||||||||||      
T  39204960 atagaggaaaatagaaggggagggctttggcgggttaacttttttc--cataatactaaaccctcctcatttggggggaactaaaaaattgtattggagg 39205057  T
Q  159 --------aaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
            |  || ||||||||| ||||||||||||||| ||||||||||||||||||    
T  39205058 aggattttaggggtttttggagggtttatatgaattcttgaaatttaatctatgttgt 39205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 41100186 - 41100100
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||| | ||||||||||||  | ||||||||||||||||    
T  41100186 aaaccctcctcatttggggaactaaaaaattgtattggaggaggattttggatggtttatatgaatttcttaaatttaatctatgtt 41100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 15803170 - 15803267
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||| | ||  |||||||||||| |||||| ||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||    
T  15803170 tttttcttcaaaatataaaaccctcctcagttgggggaactaaaaaattgtattggaggaggattttggagggtttatatgaattcttcaaatttaat 15803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 37194185 - 37194315
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| ||| || ||||| ||||||||||| ||||| ||||  || ||||||||||| |||||  ||||||||||| ||  |||||||||||||||||    
T  37194185 aaaaaaggaataagtaagtggaagaaatagaggaaaatggaagacgagggctttggggggttaac--ttttcttcataatacaaaaccctcctcatttgg 37194282  T
Q  137 -ggaactaaaaaattgtattggaaaagggtttt 168  Q
     ||||||||||||||||||||||  ||||||||    
T  37194283 aggaactaaaaaattgtattggaggagggtttt 37194315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 16813618 - 16813722
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||| || ||||| ||||| |||||   ||||||||||||||||||||  || |||||||||| ||||||| ||||||| |||||||||||||    
T  16813618 ttttcttcataatactaaactctccttatttgaaaaactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctat 16813717  T
Q  204 gttgt 208  Q
    |||||    
T  16813718 gttgt 16813722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 16852897 - 16853001
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||| || ||||| ||||| |||||   ||||||||||||||||||||  || |||||||||| ||||||| ||||||| |||||||||||||    
T  16852897 ttttcttcataatactaaactctccttatttgaaaaactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctat 16852996  T
Q  204 gttgt 208  Q
    |||||    
T  16852997 gttgt 16853001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 26905711 - 26905854
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||  |||||||||||| |||||||| || ||||| | || ||| |  |||| ||| |||||  ||||||||||  ||  ||||||    
T  26905711 gaaggtttgggaaaaaaagaatgagcaagtggaagaaataaaggaaaatgggagaggaggattttgaggggttaac--ttttcttcatgatacaaaaccc 26905808  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  26905809 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 26905854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 21626031 - 21626172
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||| ||||| ||||||| |||||||||||  ||||||||||| ||||| ||| ||  || ||||||||| |||||||||  ||||||| ||  |||||     
T  21626031 gaagatttggaaaaaaaggaatgagcaagtagaagaaatagaggaaaatggaaaggagtg-ctttggggggttaactttt--cttcataatacaaaacca 21626127  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttg 169  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  21626128 tcctcatttgggggaactaaaaagttgtattggagaagggttttg 21626172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 13018652 - 13018509
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| |||||| ||||| ||||||| ||| ||||| | || ||| ||||||||||  |||||||||  ||||||| ||  ||||||    
T  13018652 gaaggcttgagaaaaaaggaatgagtaagtggaagaaatggaggaaaatgggagaggagggctttggggagttaactttt--cttcataatacaaaaccc 13018555  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| |||||||||||| ||||||||   ||||||||||    
T  13018554 tcctcatttggaggaactaaaaaaatgtattgggggagggttttgg 13018509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 30072578 - 30072463
Alignment:
Q  30 gtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcct 129  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||| | |||||| ||||||| ||| |||||  ||||||||||| || || | | ||||    
T  30072578 gtttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttgaggggttaac--ttttcttcataatactatatcatcct 30072481  T
Q  130 catttg-gggaactaaaa 146  Q
    |||||| |||||||||||    
T  30072480 catttgagggaactaaaa 30072463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 35550303 - 35550141
Alignment:
Q  52 aagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattg 151  Q
    ||||| ||||||||||| ||||| |||| ||| ||||| ||||  |||||| ||  ||||||| || ||||||||||||||||||||||||||||| |||    
T  35550303 aagtggaagaaatagaggaaaatggaagtggagggcttggggg--ttaactgtt--cttcataatactaaaccctcctcatttggggaactaaaaagttg 35550208  T
Q  152 tattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || ||||  |          || ||||||||| |||||||||||||||||||||||||||| |||||    
T  35550207 tactggagtagagttttgtgggattttggagggtttatatgaattcttcaaatttaatctacgttgt 35550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 39750065 - 39750240
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttca-tagtagtaaacc 124  Q
    ||||| |||||||||||| |||||||||||| ||||      | ||||| | |||||| ||||||||||||| |||||||  ||||| ||  |  |||||    
T  39750065 gaaggcttgggaaaaaaggaatgagcaagtggaaga------ggaaaatgggaggggagggctttgggggtt-aactttt--cttcaataacacaaaacc 39750155  T
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttc--aaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||| | ||| | |||||| |||| |||| |||||||||||  ||||||||| ||||||||    
T  39750156 ctcctcatttggggaactaaaaaattgtact-gaagatggtttttgagggtttacatgaattcttcaaaaatttaatatatgttgt 39750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 11522261 - 11522163
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggtttt----------ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||          ||||| ||||||||||||||||||||||||| ||||||||    
T  11522261 aaaccctcctcatttggggaactaaaaagttgtattggaggagggttttggggggtttgggagggtttatatgaattcttcaaatttaatatatgttgt 11522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 43190686 - 43190532
Alignment:
Q  52 aagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaatt 150  Q
    ||||| ||||||||||| ||||| | |||||| || |||| ||| |||||||||  ||||||| ||  |||| ||| |||||||| |||| | |||||||    
T  43190686 aagtggaagaaatagaggaaaatgggaggggaggg-tttgaggggttaactttt--cttcataatacaaaactctcatcatttggaggaaatcaaaaatt 43190590  T
Q  151 gtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |  ||||||| || |  ||| ||||||||||||||||||||||||||||||    
T  43190589 gtattgaaggagggtttgggggagtttgtatgaattcttcaaatttaatctatgttgt 43190532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 40211986 - 40212053
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  40211986 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggttttgg 40212053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 3737324 - 3737222
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||||||| ||  ||| | ||||||||||  ||||| |||||||||||| |||||| ||||| |||  |||| || ||||||||||||||||| ||    
T  3737324 tttttcttcataatacaaaatcatcctcatttgaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaaatttaatata 3737225  T
Q  203 tgt 205  Q
    |||    
T  3737224 tgt 3737222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 5002837 - 5002775
Alignment:
Q  141 ctaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||||||||||  ||||||||||| |  ||| ||||||||||||||||||||||||    
T  5002837 ctaaaaaattgtattggatgagggttttggaaggcttacatgaattcttcaaatttaatctat 5002775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 39913260 - 39913334
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||||||||| ||||||| |||||||  ||| ||||||||| |||| ||||||| || |||||||||    
T  39913260 ctcctcatttggggaactcaaaaattatattggaggaggattttggagggtttacatgaattttttaaatttaat 39913334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 13767444 - 13767516
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||  | || |||||| || |||||||||||| |||||||| ||||||||||||    
T  13767444 ggggaactaaaaaattgtattgggga-ggattttggcgggtttatatgaatttttcaaattcaatctatgttgt 13767516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 36870245 - 36870310
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttt 167  Q
    |||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  36870245 tttttcttcaaaatagaaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttt 36870310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 6128908 - 6128837
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| |||||||||||||||| |   ||||||||| || ||||||||| |||||||||||||||||||||    
T  6128908 gggaactcaaaaattgtattggaagaaaattttggagggtt-atatgaatttttcaaatttaatctatgttgt 6128837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 30312480 - 30312400
Alignment:
Q  127 cctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||||||| |||||||||||||||||| |  |||||||||| || ||||||||| || |||||||  ||||||||||    
T  30312480 cctcatttgggggaactaaaaaattgtattgaaggagggttttggggggtttatatgattttttcaaatccaatctatgtt 30312400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 43572642 - 43572527
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaa 192  Q
    ||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||  |          |||||||||||| || ||| |||||||||||    
T  43572642 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagagttttggggggttttggagggttaataagaattcttcaa 43572543  T
Q  193 atttaatctatgttgt 208  Q
    ||||||| ||||||||    
T  43572542 atttaatttatgttgt 43572527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 3254635 - 3254682
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttt 167  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||    
T  3254635 aaaccctcctcatttggggaactaaaaaattgcattggatgagggttt 3254682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 16625826 - 16625787
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  16625826 ggagggtttatatgaattcttcaaatttaatctatgttgt 16625787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 21626176 - 21626223
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||    
T  21626176 agggttttggagggttaataagaattcttcaaatttaatctatgttgt 21626223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 39819880 - 39819935
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    ||||||||| || ||  ||| |||||||||||||||||||||||||||||||||||    
T  39819880 tttttcttcctaatacaaaatcctcctcatttggggaactaaaaaattgtattgga 39819935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 567439 - 567481
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  567439 ggttttggagggtttacatgaattcttcaaatttaatctatgt 567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 14385105 - 14385175
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||| ||||||| |||||||  |||  |||||||| |||| ||||| ||||||||||||||||||||    
T  14385105 ggggaactcaaaaattatattggaggaggaatttggagggtttacatgaaatcttcaaatttaatctatgt 14385175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 18780436 - 18780482
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  18780436 gggttatggaggatttatatgaatttttcaaattcaatctatgttgt 18780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 14166985 - 14167054
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||| ||| |  |||||||||| |||| || | || |||||||||||||||||||||    
T  14166985 aactaaaaaattgtattagaataaagttttggagggtttacataattttttcaaatttaatctatgttgt 14167054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 31584864 - 31584811
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattg 156  Q
    |||||||||| | ||  ||||||||||||||||||||||||||||||| |||||    
T  31584864 tttttcttcaaaatataaaaccctcctcatttggggaactaaaaaattatattg 31584811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 18589986 - 18590107
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||| |||| || ||||||||| || ||||||||||| ||||| | |||||| || |||||||  |||||  | ||||||||| || ||||| |    
T  18589986 gaaggcttggaaaaacaggaatgagcaaatggaagaaatagaggaaaatgggaggggagggttttggggtgttaac--tgttcttcataatactaaactc 18590083  T
Q  126 tcctcatttggggaactaaaaaat 149  Q
    ||||| ||||||| ||||| ||||    
T  18590084 tcctcttttgggggactaagaaat 18590107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 31550324 - 31550245
Alignment:
Q  127 cctcattt-ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||| ||||||||||||||    ||||| |||||| |||||||||||| |||||||  ||||||||||||    
T  31550324 cctcatttaggggaactcaaaaattgtattggg---gggttatggagggtttatatgaatttttcaaatccaatctatgttgt 31550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 1408807 - 1408963
Alignment:
Q  51 caagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggg-gaactaaaaaat 149  Q
    ||||||||||||||| |||||| ||| |||| | | |||| |||| || |  ||||||||||||  |  ||  ||||||| |||||| ||||||||||||    
T  1408807 caagtgaaagaaatatagaaaactaggagggaaggacttttgggggttca--tttttcttcataacacaaattcctcctcgtttgggtgaactaaaaaat 1408904  T
Q  150 tgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |  ||||||  | |||||| |||| ||| | ||||||||| ||||||| ||||||||||    
T  1408905 tacattggaggatggttttcgagggtttgtgtgaattctttaaatttattctatgttgt 1408963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 8184190 - 8184147
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||||| |||||| |||||||||||| |||||||||||||    
T  8184190 gggttttggaagatttacatgaattcttcagatttaatctatgt 8184147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 9087546 - 9087448
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggattt----------atatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||| |||||| || |||          |||||||||||||||||||||| ||||||||    
T  9087546 aaaccctcctcatttggggaactgaaaaattgtatcggaggaggattttggggggtttgggagagtttatatgaattcttcaaatttaatatatgttgt 9087448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 1270856 - 1270695
Alignment:
Q  45 aatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaa 144  Q
    |||||||||||| ||||||| ||| ||||| ||||  || || |||||||| ||||||| | |  ||||| |  |||||| |||||||||||||||||||    
T  1270856 aatgagcaagtggaagaaatcgaggaaaatggaagaagagggttttggggggttaacttatat--tcataatgctaaacc-tcctcatttggggaactaa 1270760  T
Q  145 aaaa-ttgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaa 198  Q
    |||| |||||||| |  |||||||||          |||| ||||||||||||||||||||||||    
T  1270759 aaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaa 1270695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 4042016 - 4042062
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  4042016 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 4042062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 10165465 - 10165511
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  10165465 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 10165511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 13765968 - 13765922
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  13765968 gggttgtggagggtttatatgaatttttcaaattcaatctatgttgt 13765922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 30523230 - 30523284
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||  ||| ||| || ||||||||||||||||||||||||||||    
T  30523230 ttttcttcataatacaaaatccttctaatttggggaactaaaaaattgtattgga 30523284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 36567307 - 36567261
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  36567307 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 36567261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 37194319 - 37194365
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| || ||| |||||||||||||||||| ||||||||    
T  37194319 gggttttggagggttaataagaattcttcaaatttaatttatgttgt 37194365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 3039342 - 3039274
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||| ||||||| ||| ||||| ||| |||||||||||| || ||||| ||||||| ||||    
T  3039342 aactaaaaaattgcattggaagagg-ttttgaagggtttatatgaattatttaaattcaatctatattgt 3039274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 7486384 - 7486417
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| ||||||||||||||||||    
T  7486384 tttatatgaattctttaaatttaatctatgttgt 7486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 13767255 - 13767300
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| ||||||||||||||||||||||||| ||| ||| ||||    
T  13767255 ggttttgaaggatttatatgaattcttcaaattaaatttatattgt 13767300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 36030852 - 36030889
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  36030852 ggaggatttatatgaattcttcaaattcagtctatgtt 36030889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 37217020 - 37217049
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatg 204  Q
    ||||||||||||||||||||||||||||||    
T  37217020 tttatatgaattcttcaaatttaatctatg 37217049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 43334860 - 43334905
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||||    
T  43334860 ggttatggagggtttatatgaatttttcaaattcaatctatgttgt 43334905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 21834923 - 21834991
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcattt-ggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||| ||  |||| |||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  21834923 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 21834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 21834995 - 21835039
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||||    
T  21834995 gttttggagggtttatatgaattaatcaaatttaatatatgttgt 21835039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 25960633 - 25960593
Alignment:
Q  168 tggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  25960633 tggagggtttatatgaatttttcaaattcaatctatgttgt 25960593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 44137187 - 44137231
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||    
T  44137187 gggttatggagggtttatatgaatttttcaaattcaatctatgtt 44137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 7e-42; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 36269650 - 36269840
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  36269650 gaaggcttgggaaaaaaggaatgagcaagtggaagaaatagagaaaaatgggaggggagggctttggggggttaac--ttttcttcataatacaaaaccc 36269747  T
Q  126 tcctcattt-ggggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||||| ||||||||||||||||||||||||  |          |||||||||||||||||||||||||||||||||| |||||||||||    
T  36269748 tcctcatttgggggaactaaaaaattgtattggaggagagtttcggggggttttggaggatttatatgaattcttcaaattcaatctatgttg 36269840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 33324550 - 33324721
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||  ||||||||||| ||||| | | | || ||||||||||| |||||||||  ||||||| || ||||||||||||||||    
T  33324550 ggaaaaaaggaatgagcaagtagaagaaatagaggaaaatgggaagagagggctttggggggttaactttt--cttcataatactaaaccctcctcattt 33324647  T
Q  135 g-gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    | ||||||||||| |||||||| ||  |||||||| |||| |||||||||||||||||||||||||| |||||||    
T  33324648 gagggaactaaaa-attgtattagaggagggttttagagggtttatatgaattcttcaaatttaatcaatgttgt 33324721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 17760626 - 17760468
Alignment:
Q  49 agcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaa 147  Q
    |||||||| ||||||||||| ||||| | || |||  |||||||||| |||||||||  ||||||| ||  ||||||||||||||||| |||||||||||    
T  17760626 agcaagtggaagaaatagaggaaaatgggagaggagagctttggggggttaactttt--cttcataatacaaaaccctcctcatttggaggaactaaaaa 17760529  T
Q  148 attgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||   |||||||||||| || ||| |||||||||||||||||||||||||||    
T  17760528 attgtattggaggggggttttggagggttaataagaattcttcaaatttaatctatgttgt 17760468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 50225948 - 50226128
Alignment:
Q  27 aaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccct 126  Q
    |||| |||||||| ||| ||| |||| ||||||||||||||| |||||  |||| || |  |||||||| |||||||||  ||||||| || ||||||||    
T  50225948 aaggcttgggaaagaagaaataagcaggtgaaagaaatagaggaaaatgaaaggcgaagattttggggggttaactttt--cttcataatattaaaccct 50226045  T
Q  127 cctcatttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     |||||||||  |||||||||||||||||||||  || ||||| |||| |||||||||||||||| |||||||||||||||||    
T  50226046 tctcatttggaagaactaaaaaattgtattggaggagcgtttttgagggtttatatgaattcttctaatttaatctatgttgt 50226128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 34154502 - 34154321
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||| || ||||| ||||||||||| |||||  |||  || ||||||||||| |||||||||  ||||||| ||  |||||     
T  34154502 gaaggcttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgaaagatgagggctttggggggttaactttt--cttcataatacaaaacct 34154405  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||| || ||| |||||||| ||||||||| ||||||||    
T  34154404 tcctcatttggaggaactaaaaaattgtattggaggggggttttggagggttaataagaattctttaaatttaatttatgttgt 34154321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 36886777 - 36886967
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||||| ||||||||||| |||||   |||||| ||||||||||| |||||  ||||||||||| || |||||||    
T  36886777 gaaggcttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgagaggggagggctttggggg-ttaac--ttttcttcataatactaaaccc 36886873  T
Q  126 tcctca-tttggggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     ||||| |||||||||||||||||||| ||||||  |          |||||||||||| |||||||||||| |||||||||||||||||||||    
T  36886874 ccctcattttggggaactaaaaaattgcattggaggagggtttttgggggttttggagggtttatatgaatttttcaaatttaatctatgttgt 36886967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 207
Target Start/End: Original strand, 27255126 - 27255296
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||| |||||||||||| ||||||||||| ||||| | || ||| ||||||||| | |||||||||  ||||||| ||  ||||||||||||||||    
T  27255126 gaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaactttt--cttcataatacaaaaccctcctcatttg 27255223  T
Q  136 g-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
      |||||||||||| ||||| ||   ||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  27255224 aaggaactaaaaaaatgtatcgggggagggttttggagggttaataagaatttttcaaatttaatctatgttg 27255296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 5584412 - 5584555
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  5584412 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaac--ttttcttcataatacaaaaccc 5584509  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  5584510 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 5584555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 39887091 - 39886907
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||  |||||||||||| |||||||| ||  ||||   |||||| ||||||||| | |||||||||  ||||||| || ||||||||||||||||    
T  39887091 ggaaaaaaagaatgagcaagtggaagaaataaagggaaatgagaggggagggctttgggtggttaactttt--cttcataatactaaaccctcctcattt 39886994  T
Q  135 gg--ggaactaaaaaattgtattggaaaa-----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||  |||||||||||||||||||||||||           || ||||||||  ||||||||||||||||||||||||||||||||||    
T  39886993 ggtgggaactaaaaaattgtattggaaaaaaagttttgggggtttttggagagtttatatgaattcttcaaatttaatctatgttgt 39886907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 43036395 - 43036306
Alignment:
Q  120 aaaccctcctcatttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||| |||||||||||||||||||||    ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  43036395 aaaccctcctcatttgggagaactaaaaaattgtattggagggaggtttgggagggtttatatgaattcttcaaatttaatctatgttgt 43036306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 52068314 - 52068131
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggt---ttaacttttttcttcatagtagtaaa 122  Q
    ||||| ||| |||||||| ||| || || || ||||||||||| ||||| | || ||| |||||||||||    |||||||||  ||||||| ||  |||    
T  52068314 gaaggcttgagaaaaaagaaataagtaaatggaagaaatagaggaaaatgggagaggagggctttgggggggggttaactttt--cttcataatacaaaa 52068217  T
Q  123 ccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    | |||||||||||| ||||||||||||||||||||||  |||||||||| || || ||| |||||||||||||||||| |||||||    
T  52068216 ctctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaatttatgttg 52068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 29091994 - 29092124
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||  ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  29091994 gaaggtttgggaaaaaatgaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggg-ttaac--ttttcttcataatacaaaaccc 29092090  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||||||||||||||||||||||    
T  29092091 tcctcatttggaggaactaaaaaattgtattgga 29092124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 28848888 - 28848788
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    ||||||||||||  |  ||||||||||||||||||| |||| |||||||||||||||  ||||||||||| | |||| ||||||||||||||||||||||    
T  28848888 tttttcttcataacacaaaaccctcctcatttgggggaactcaaaaattgtattggaggagggttttggatggtttacatgaattcttcaaatttaatct 28848789  T
Q  202 a 202  Q
    |    
T  28848788 a 28848788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 42333627 - 42333723
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||| ||  ||||||||||||||| |||||||||| | ||||||||||  || |||||||| | |||||||||||||||||||||||||    
T  42333627 tttttcttcataatacaaaaccctcctcatttagggaactaaagagttgtattggaggagagttttggacggtttatatgaattcttcaaatttaat 42333723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 35619569 - 35619497
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||  ||||||||| ||| ||| ||||||||||||||||||||| ||||||||    
T  35619569 gggaactaaaaaattgtattggatgagggttttgaagggtttgtatgaattcttcaaatttaatatatgttgt 35619497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 37649790 - 37649649
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||  ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||  |||||  ||||||| ||| ||  ||||||    
T  37649790 gaaggcttgggaaaaaatgaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggtgttaac--ttttctttataatacaaaaccc 37649693  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggtttt 168  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||    
T  37649692 tcctcatttggaggaactaaaaaattgtattggaggagggtttt 37649649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 46001474 - 46001601
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||| ||| || ||||| ||||||||||| ||||| | || ||| || ||||| || |||||  ||||||||||| ||  ||||||    
T  46001474 gaaggtttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggttttggagg-ttaac--ttttcttcataatataaaaccc 46001570  T
Q  126 tcctcatttgg-ggaactaaaaaattgtatt 155  Q
    ||||||||||| |||||||||||||||||||    
T  46001571 tcctcatttggaggaactaaaaaattgtatt 46001601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 50586964 - 50587132
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| || ||||||||| ||||||||||| | | | ||  |||| ||||||||||| || |  |||||||||||| ||  ||| |||||||||||    
T  50586964 ggaaaaaaggaaggagcaagtggaagaaatagaggacatt-gagagggagggctttggggggttca--tttttcttcataatacaaaatcctcctcattt 50587060  T
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||  | |  ||||||| ||||||  ||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  50587061 gggccatt--aaaattgcattggaggagggttttgaagggtttatatgaattcttcaaatttaaactatgttgt 50587132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 5970593 - 5970424
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| || ||| ||||  ||||||||||| | | ||| |||||| ||||||||||||| |   |||||||||||| ||   ||||||| |  |||||    
T  5970593 aaaaaaggaaggagtaagttgaagaaatagagtacattaggaggggagggctttgggggttaa---tttttcttcataatatagaaccctcattgtttgg 5970497  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     ||||||||||| ||||||||||  || ||||| |||| ||||||||||||||||||||||| ||||| ||||    
T  5970496 tggaactaaaaagttgtattggatgagagtttttgagggtttatatgaattcttcaaatttattctatattgt 5970424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 41817466 - 41817330
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||| ||||||| ||| || ||||| ||||||||||| ||||| | || ||| | ||||||||||| |||||||  ||||||| ||  |||||||| |||    
T  41817466 ttggaaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggaggactttgggggtt-aactttt--cttcataatacaaaaccctcatca 41817370  T
Q  132 tttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||| ||||||||||||||||||||||  ||||||||||    
T  41817369 tttggaggaactaaaaaattgtattggaggagggttttgg 41817330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 32511674 - 32511605
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||| | ||| ||||||| || |||||| |||||||||||||||||| ||||||||    
T  32511674 aactaaaaaattgtattgaataagagttttggggggtttatacgaattcttcaaatttaatatatgttgt 32511605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 41432887 - 41432797
Alignment:
Q  78 aggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||| |||||||||||||| |  |||||||||||| ||  ||||||||||||||||||| ||| |||| ||||||||||  ||||||||||    
T  41432887 aggggaaggctttgggggtttca--tttttcttcataatataaaaccctcctcatttgggggactcaaaatttgtattggaggagggttttgg 41432797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 69692 - 69769
Alignment:
Q  77 aaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattg 156  Q
    ||||||| || |||||||| |||||||||  ||||||| || |||||||||||| |||| ||||||||||||||||||||    
T  69692 aaggggagggttttggggggttaactttt--cttcataatactaaaccctcctcgtttgaggaactaaaaaattgtattg 69769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 17556649 - 17556750
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttat----atgaattcttcaaattta 197  Q
    |||||||||| | ||  ||||||||||||||||||| |||||||||||| |||||||  |||||||||| || |||||    ||||||||||||||||||    
T  17556649 tttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattctattggaggagggttttggggggtttatatgaatgaattcttcaaattta 17556748  T
Q  198 at 199  Q
    ||    
T  17556749 at 17556750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 30543419 - 30543351
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    |||||||| |||||||||||||    ||||||||||||| |||| ||||||||||||||||||||||||    
T  30543419 ggggaactcaaaaattgtattgctggagggttttggagggtttacatgaattcttcaaatttaatctat 30543351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 52073547 - 52073447
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||||| |   ||||||||||||||||||| |||| |||||||||| | ||  ||||||||||||| |||| ||||||| |||||||| |||||    
T  52073547 tttttcttcataattcaaaaccctcctcatttgggggaactcaaaaattgtactagaggagggttttggagggtttagatgaatttttcaaattcaatct 52073448  T
Q  202 a 202  Q
    |    
T  52073447 a 52073447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 2909101 - 2909168
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||  ||||||||||    
T  2909101 ttttcttcataatagaaaaccctactcatttggaggaactaaaaaattgtattggaggagggttttgg 2909168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 50476519 - 50476626
Alignment:
Q  102 ttttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatc 200  Q
    |||||| |||||| ||  ||| || ||||||||| ||||||| |||||||||||||||  |||||||| |||| |||||||||||| || || || ||||    
T  50476519 ttttttattcataatacaaaatccccctcatttgagggaactcaaaaattgtattggaggagggttttcgagggtttatatgaattttttaatttcaatc 50476618  T
Q  201 tatgttgt 208  Q
    ||||||||    
T  50476619 tatgttgt 50476626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 15463826 - 15463908
Alignment:
Q  127 cctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| |||| ||||||||||||||   |||||| |||||| |||||||||||| |||||||| ||||||| ||||    
T  15463826 cctcatttgggggaactgaaaaattgtattgggggagggttatggagggtttatatgaatttttcaaattcaatctattttgt 15463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 34738372 - 34738414
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  34738372 tttggaggatttatatgaattctttaaatttaatctatgttgt 34738414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 32672547 - 32672691
Alignment:
Q  52 aagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattg 151  Q
    ||||| ||||||||||| |||| |  || ||| ||||||||||| |||||||||  ||||||  || |||||||||||| |||| | |||||||||||||    
T  32672547 aagtgcaagaaatagaggaaaacaagagaggacggctttggggggttaactttt--cttcatcatactaaaccctcctcgtttgagaaactaaaaaattg 32672644  T
Q  152 tattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||  |||        ||| | ||||||||||||||||| ||||||||||||||||    
T  32672645 tatt--aaa--------ggaaggtttatatgaattcttcatatttaatctatgttgt 32672691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 45752292 - 45752220
Alignment:
Q  133 ttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||    || ||| ||||| ||||| ||||||||||||||||||| ||||||||    
T  45752292 ttggggaactaaaaaattgtattggg---ggatttgggagggtttatgtgaattcttcaaatttaatatatgttgt 45752220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 49103034 - 49102956
Alignment:
Q  120 aaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||          ||||| ||||||||||||||||||||||||| |||||||    
T  49103034 aaaccctcctcatttgggggaactaaaaaattgtattgga----------ggagggtttatatgaattcttcaaatttaatatatgttg 49102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 51246629 - 51246557
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||||||||||  ||||||||| ||| |||||||||||| |||||||| ||||||| ||||    
T  51246629 ggggaactcaaaaattgtattggaggagggttttg-agggtttatatgaatttttcaaattcaatctattttgt 51246557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 43572018 - 43571948
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| ||| ||||||||||    ||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  43572018 ggggaactcaaatattgtattggg---gggttatggaggatttatatgaatttttcaaattcaatctatgttgt 43571948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 2925964 - 2925918
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  2925964 gggttatggagggtttatatgaatttttcaaatttaatctatgttgt 2925918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 27500036 - 27500082
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  27500036 gggttatggaggatttatatgaatttttcaaattcaatctatgttgt 27500082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 34750071 - 34750001
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||| ||||||||||||||   ||| ||||| |||||||||||  |||||||||||||||| |||||    
T  34750071 ggggaactcaaaaattgtattggtggaggattttgaaggatttatatttattcttcaaatttaatttatgt 34750001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 37955233 - 37955275
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  37955233 ttttggaggatttatatgaattctttaaatttaatcgatgttg 37955275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 38795435 - 38795389
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||    
T  38795435 gggttttggaaggtttatatgaattcttcaaatttaatctgtgttgt 38795389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 666303 - 666372
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||  || |||||| |   ||||||||||||||||||||||||| ||| ||||    
T  666303 aactaaaaaattgtattggagcagagttttgaattgtttatatgaattcttcaaatttaatatatattgt 666372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 33854865 - 33854816
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  33854865 ttttggagcgtttatatgaatttttcaaatttaatctatgttgttatgat 33854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 33926057 - 33926106
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  33926057 ttttggagcgtttatatgaatttttcaaatttaatctatgttgttatgat 33926106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 42806141 - 42806268
Alignment:
Q  91 gggggtttaact-tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatt----------tat 179  Q
    |||||||||| | |||||||||| | ||  ||||||| ||||||| ||| |||||||||||||||||||| | ||||||||||| ||          | |    
T  42806141 gggggtttaattatttttcttcaaaatataaaacccttctcattttggggactaaaaaattgtattggaaga-ggttttggagggtttgtgacggtatgt 42806239  T
Q  180 atgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||||||    
T  42806240 atgaattcttcaaatttaatctatgttgt 42806268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 33579234 - 33579282
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggtttt 168  Q
    ||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  33579234 aaaccctcctcatttggggaactcaaaagttgtattggaggagggtttt 33579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 17675248 - 17675291
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||    
T  17675248 gggttatggaggatttatatgaatttttcaaattcaatctatgt 17675291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 25561398 - 25561303
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggtttt---------ggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||| || |||||||||||||||||||||| |||||||  ||||||||         ||||  ||||||||||||||||||||||||| ||||||    
T  25561398 aaaccatcgtcatttggggaactaaaaaattatattggaggagggttttgggggtttgggagagtttatatgaattcttcaaatttaatatatgtt 25561303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 36325774 - 36325813
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  36325774 ggagggtttatatgaattcttcaaattcaatctatgttgt 36325813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 50084124 - 50084159
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtatt 155  Q
    |||||||| |||||||||||||||||||||||||||    
T  50084124 aaaccctcgtcatttggggaactaaaaaattgtatt 50084159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 51303205 - 51303174
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaa 193  Q
    ||||||||||||||||||||||||||||||||    
T  51303205 gggttttggaggatttatatgaattcttcaaa 51303174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 896524 - 896478
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  896524 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 896478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 6015491 - 6015529
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  6015491 gagggtttatatgaattcttcaaatttaatatatgttgt 6015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 19652324 - 19652278
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||    
T  19652324 gggttctgaaggatttatatgaattcttcatatttaatctattttgt 19652278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 24436953 - 24436915
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||| || |||||||||||||||||||||    
T  24436953 gaggatttatatgatttattcaaatttaatctatgttgt 24436915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 32299154 - 32299200
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  32299154 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 32299200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 34552168 - 34552134
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtat 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  34552168 aaaccctcctcatttgaggaactaaaaaattgtat 34552134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 39889687 - 39889641
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  39889687 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 39889641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 42162082 - 42162036
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  42162082 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 42162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 47206453 - 47206407
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47206453 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47206407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 47905718 - 47905672
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47905718 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47905672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 4204808 - 4204763
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    |||||||||||| ||||||||||| |||||||||| ||| ||||||    
T  4204808 gggttttggagggtttatatgaatgcttcaaattttatcaatgttg 4204763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 26940613 - 26940691
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattggaaaagggttt-tggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||| | ||||| ||||||||    |||||| |||||| |||||||||||| |||||||| || |||||||||    
T  26940613 cctcatttggggaattcaaaaaatgtattgg----gggtttatggagggtttatatgaatttttcaaattcaacctatgttgt 26940691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 28718840 - 28718807
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaattta 197  Q
    |||||||||| |||||||||||||||||||||||    
T  28718840 gttttggagggtttatatgaattcttcaaattta 28718807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 32287584 - 32287629
Alignment:
Q  124 cctcctcatttggggaactaaaaaattgtattggaaaagggttttg 169  Q
    |||| ||||||| ||||||||||||||||||||||  |||||||||    
T  32287584 cctcttcatttgaggaactaaaaaattgtattggatgagggttttg 32287629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 7915430 - 7915563
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt- 134  Q
    |||||||| || ||||||||| || ||||||||||   | | || ||| ||||||||||| || |  |||||||||||| ||   ||||||||||||||     
T  7915430 gaaaaaaggaaggagcaagtggaaaaaatagagaactttgggagaggagggctttggggggttca--tttttcttcataatatagaaccctcctcatttt 7915527  T
Q  135 ggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||| | | |||||||||||||||  ||||||||||    
T  7915528 gggggattcaaaaattgtattggaggagggttttgg 7915563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 28748216 - 28748288
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| |||||||||||||||  |  |||||  ||| |||||||||||| || ||||| ||||||||||||    
T  28748216 gggaacttaaaaattgtattggatgaaagtttttaagggtttatatgaattttttaaattcaatctatgttgt 28748288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 40707233 - 40707189
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||    
T  40707233 gggttatggagggtttatatgaatttttcaaattcaatctatgtt 40707189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 41428070 - 41428018
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggattt 177  Q
    |||||||||||||||||| ||||||| |||||||  ||| |||||| ||||||    
T  41428070 ctcctcatttggggaactcaaaaattatattggaggaggattttgggggattt 41428018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 51572264 - 51572336
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggagga-tttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||| ||||||||||||| | ||||| ||| || || |||| || ||||||| |||||||||||||||||    
T  51572264 gggaactcaaaaattgtattgaacaagggattttgaagagtttagataaattctttaaatttaatctatgttg 51572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 79776 - 79606
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| || ||||||||| ||||||||||| ||||| | |||||| ||||||||||| |||  ||||  ||||||| || ||||||||||||||||||    
T  79776 aaaaaaggaacgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttacgtttt--cttcataatactaaaccctcctcatttgg 79679  T
Q  137 gg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || ||||||||||||||||||||  ||||||||||| | |||||||||| |||||||||||||||||||||||    
T  79678 gggaactaaaaaattgtattggaggagggttttggacggtttatatgaactcttcaaatttaatctatgttgt 79606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 14581921 - 14581743
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||  | ||||||||||| ||||||||| |||| ||||||| |||||||    ||||||||||| || |||||||    
T  14581921 gaaggcttgggaaaaaaggaatgagcaaccggaagaaatagaggaaaatagaatgggagggctttgagggttta---cttttcttcataataataaaccc 14581825  T
Q  126 tcctcattt-ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||| |||||  ||||||| |||||||||  |||||||| |||| |||||| ||||||||||| |||||||||||||    
T  14581824 tcctcatttgggggagttaaaaaactgtattggagtagggtttttgagggtttataagaattcttcaattttaatctatgtt 14581743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 41866280 - 41866110
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||  |||||||||||| |||||||| || ||||| | |||||| || ||| |||| |||||||||  ||||||| || ||||||||||| |||||    
T  41866280 gaaaaaatgaatgagcaagtggaagaaataaaggaaaatgggaggggaggg-tttcggggattaactttt--cttcataatattaaaccctccttatttg 41866184  T
Q  136 gggaa-ctaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| ||||||||||||||||||  ||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  41866183 gggaaactaaaaaattgtattggaggagggttttgaagggtttatataaattcttcaaatttaatctatgttgt 41866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 26772815 - 26772635
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||| | |||||||||  ||||||| ||  ||||||    
T  26772815 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagagga-ggctttgggaggttaactttt--cttcataatacaaaaccc 26772719  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || |||||||  ||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  26772718 tcatcatttgaaggaactaaaaaattgtattggatgagggttttggagggttaataagaattcttcaaatttaatttatgttgt 26772635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 34335960 - 34336128
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg- 135  Q
    ||||||| |||||||||||| |||||||| || ||||| | |||||| ||||||||||||| |||||||  ||||||  || |||||| ||||||||||     
T  34335960 aaaaaaggaatgagcaagtggaagaaataaaggaaaatgggaggggagggctttgggggtt-aactttt--cttcatgatactaaacc-tcctcatttga 34336055  T
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||| ||||||  || ||||||  || ||||||||||||||||||||||||||||| ||||    
T  34336056 gggaactaaaaaattgcattggaggagtgttttgaggggtttatatgaattcttcaaatttaatctattttgt 34336128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 21174022 - 21173889
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  |||||||||||||||    
T  21174022 ggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaac--ttttcttcataatacaaaaccctcctcattt 21173926  T
Q  135 gg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    || |||||||||||||| |||||||  ||||||||||    
T  21173925 ggaggaactaaaaaattatattggaggagggttttgg 21173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 31305856 - 31305777
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||| | ||||||||||| ||| |||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  31305856 aaaccctcttaatttggggaacgaaacaattgtattggagaaggattttggagggtttatatgaattcttcaaatttaat 31305777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 31149918 - 31150000
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||| |||||| | |  || |||||||||| ||||||||||||||||||||||| ||||||||||    
T  31149918 tcctcatttggggaactaaaaagttgtatcgcaggagcgttttggagggtttatatgaattcttcaaatttattctatgttgt 31150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 28416259 - 28416154
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    |||||||||| | ||  |||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| |||||| | ||| |||||||||||| ||    
T  28416259 tttttcttcaaaatataaaaccctccttatttggggaactacaaaattgtattggatgagggttttggagggtttatacgtattgttcaaatttaatata 28416160  T
Q  203 tgttgt 208  Q
     |||||    
T  28416159 cgttgt 28416154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 43239577 - 43239766
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| |||||  ||| ||||||||||||| ||||| | |||||| ||||||  ||| |||||||||  |||||||  |  ||| ||    
T  43239577 gaaggcttgtgaaaaaaggaatgaataagagaaagaaatagaggaaaatgggaggggagggctttatggggttaactttt--cttcataacacaaaagcc 43239674  T
Q  126 tcctcatttggggaactaaaaaattgtattgga----------aaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||||||||||| |||||||||||||||||           | || ||||| ||| |||||||||||||||||||||||||||||||||    
T  43239675 tcctcatttggggaattaaaaaattgtattggatgaggtttttgagggattttgaagggtttatatgaattcttcaaatttaatctatgttg 43239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 6943517 - 6943449
Alignment:
Q  140 actaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||| ||||||||    
T  6943517 actaaaaaattgtattggaggagggttttggagggttaatatgaattcttcaaatttaatttatgttgt 6943449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 208
Target Start/End: Original strand, 39193841 - 39194029
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcc 128  Q
    ||||| ||||||||| ||  |||||||| ||||||||||| | | | | |||||| ||||||||||| ||||  |||||||||||| ||  ||||||||     
T  39193841 ggttttggaaaaaaggaagtagcaagtggaagaaatagagtacattgggaggggagggctttggggggttaa--tttttcttcataatataaaaccctct 39193938  T
Q  129 tcattt-ggggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||||||||||| ||||||||||  |          |||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  39193939 tcatttgggggaactaaaaagttgtattggaggagggtttttgggggttttgaagggtttatatgaattcttcaaatttattctatgttgt 39194029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 8228451 - 8228571
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||| |||||||||||| ||||||||||||||||| | | || |  | |||| ||| ||||||||||  |||||| ||  |||||||| |||||||    
T  8228451 gaaaaaaggaatgagcaagtggaagaaatagagaaaaatgggatggaagtgatttgaggggttaacttttt--ttcataatacaaaaccctcatcatttg 8228548  T
Q  136 gggaactaaaaaattgtattgga 158  Q
    |||||||||||||| ||||||||    
T  8228549 gggaactaaaaaatcgtattgga 8228571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 36837552 - 36837481
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  36837552 ggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgt 36837481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 23932731 - 23932601
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||| |  ||||| ||||||||||| |||||   || ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  23932731 gaaggcttgggaaaaaaggaataaataagtggaagaaatagaggaaaatgagagaggagggctttggggg-ttaac--ttttcttcataatacaaaaccc 23932635  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||||||||||||||||||||||    
T  23932634 tcctcatttggaggaactaaaaaattgtattgga 23932601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 39778815 - 39778893
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||  ||||||| | |||||||||||||||||||||||||    
T  39778815 aaaccctcctcctttggggaa-taaaaaattgtattggaggagaattttggatggtttatatgaattcttcaaatttaat 39778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 12506309 - 12506179
Alignment:
Q  87 ctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaa----------gggttttggaggat 175  Q
    ||||||||| |||||||||  ||||| | || |||||||||||||||||||| |||||||||||||||||||| ||          ||| |||||||| |    
T  12506309 ctttggggggttaactttt--cttcaaaatattaaaccctcctcatttgggggaactaaaaaattgtattggagaaggatttttgggggctttggagggt 12506212  T
Q  176 ttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||| ||| ||||    
T  12506211 ttatatgaattcttcaaatttaatatatattgt 12506179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 13258511 - 13258582
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||||||||||||| | ||| |||  |||||||| ||||||||||||||||||||  ||||||||||    
T  13258511 ggggaactaaaaaattgtaatcgaagaggactttggagggtttatatgaattcttcaaatccaatctatgtt 13258582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 27085356 - 27085446
Alignment:
Q  128 ctcatttggggaactaaaaaattgtattgga----------aaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||||||||          || |||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  27085356 ctcatttggggaactaaaaaattgtattggaggatggttttaaggggtttgggagggtttatatgaattcttcaaatttaatatatgttgt 27085446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 32158773 - 32158863
Alignment:
Q  120 aaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggtttt-ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||||||||||| || ||| ||||| ||||||||    
T  32158773 aaaccctactcatttgggggaactaaaatattgtattggagaagagttttgggagggtttatatgaattttttaaaattaatatatgttgt 32158863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 1839919 - 1839803
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttg----------gaggatttatatgaattcttca 191  Q
    |||||||||| | ||  ||||||||||||||||||| |||| |||||||||||||||  |||||||||          |||| |||||||||||||||||    
T  1839919 tttttcttcaaaatataaaaccctcctcatttgggggaacttaaaaattgtattggaggagggttttggggggtttaagagggtttatatgaattcttca 1839820  T
Q  192 aatttaatctatgttgt 208  Q
    |||||||| ||||||||    
T  1839819 aatttaatatatgttgt 1839803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 16424164 - 16424233
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttg-gaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||||||||||||||| ||  ||| ||||| |||| ||||||||||||||||||||||||| |||||    
T  16424164 ggaactaaaaaattgtattagaggaggattttgagagggtttatatgaattcttcaaatttaatatatgt 16424233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 5911507 - 5911471
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattg 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  5911507 aaaccctcctcatttggggaactaaaaaattgtattg 5911471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 29584107 - 29584272
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagt-gaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctc 130  Q
    |||| ||||||| ||||||||||| |||| |||||| |||||||  ||||||| ||||||| ||| |||||  ||||| ||||| ||  |||||||||||    
T  29584107 ttggaaaaaaaggaatgagcaagtggaaaaaaatagggaaaaatgaaaggggagggctttgtggg-ttaac--ttttcatcataataccaaaccctcctc 29584203  T
Q  131 atttggg-gaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || ||||  |||||||||| ||||||||           ||||| ||||||||||||||||||| ||||||||||||||    
T  29584204 atatgggataactaaaaaaatgtattgg----------gggagggtttatatgaattcttcaaaattaatctatgttgt 29584272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 44251655 - 44251551
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||| || ||||  || |||||||| ||||||||||||  ||||| ||  ||| ||||| ||| |||||| ||||| || |||||||||||||    
T  44251655 ttttcttcataatactaaattcttctcatttgaggaactaaaaaacagtatttgaggaggattttgaagggtttatacgaattttttaaatttaatctat 44251556  T
Q  204 gttgt 208  Q
    |||||    
T  44251555 gttgt 44251551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 23702498 - 23702463
Alignment:
Q  173 gatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||||||||||    
T  23702498 gatttatatgaattcttcaaatttaatctatgttgt 23702463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 31297422 - 31297379
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  31297422 cctcatttggggaactaaaaaattgtattggaggagggttttgg 31297379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 41455239 - 41455294
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| | ||  |||||||||||||||||| ||||||||||||||||||||    
T  41455239 tttttcttcaaaatataaaaccctcctcatttgggaaactaaaaaattgtattgga 41455294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 42589887 - 42589844
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||    
T  42589887 ggttttggaggatttatatgaattcttcaaattcaatttatgtt 42589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 43733291 - 43733103
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcc 128  Q
    ||||| ||||||| | |||||||||| | ||||||||||  | | | ||||| || |||||| |||||| ||||||||  |||||| ||  ||| |||||    
T  43733291 ggttttggaaaaagggaatgagcaagaggaagaaatagaagacattggaaggagagggctttaggggtt-aacttttta-ttcataatacaaaatcctcc 43733194  T
Q  129 tcatttg-gggaactaaaaaattgtattggaaaagggtttt----------ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| ||||| |||||||||||||||||  ||||||||          |||||||||||||||||| || ||||| ||||||||||||    
T  43733193 tcatttgagggaattaaaaaattgtattggaggagggtttttgggagttttggaggatttatatgaatttttaaaattcaatctatgttgt 43733103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 5935200 - 5935266
Alignment:
Q  143 aaaaaattgtattggaaaagggtttt-ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||  | |||| |||| |||||||||| |||||||||||||||||||| ||||||||    
T  5935200 aaaaaattgtattacagaaggattttaggaggatttaaatgaattcttcaaatttaatatatgttgt 5935266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 12595370 - 12595408
Alignment:
Q  167 ttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  12595370 ttggagggtttatatgaattcttcaaatttaatctatgt 12595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 6943607 - 6943542
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttg 91  Q
    |||| ||||||||||||  ||||||||| || ||||||||||| ||||| ||||| ||||||||||    
T  6943607 gaagatttgggaaaaaaagaatgagcaattggaagaaatagaggaaaatggaaggtgatggctttg 6943542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 32175 - 32251
Alignment:
Q  132 tttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||||| ||||||||||| ||  || ||||| || | |||||||||||||||||||| |||| ||||||||    
T  32175 tttgaggaactacaaaattgtattagaggagagtttttgacggtttatatgaattcttcaaatgtaatttatgttgt 32251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 1111160 - 1111120
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  1111160 tttggagggtttatataaattcttcaaatttaatctatgtt 1111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 1840297 - 1840199
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttg--gaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||  ||  ||||||||||||||||| ||||||||| | |||||||||||     ||| |  |||| |||||||||||||||||||||||||    
T  1840297 tttttcttcatgatacaaaaccctcctcatttggaggaactaaatagttgtattggaa-----tttggaagagggtttatatgaattcttcaaatttaat 1840203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 13406433 - 13406477
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||||||||||||||| ||||||| || |||||||    
T  13406433 tcctcatttggggaactaaaaaattgaattggaagagagttttgg 13406477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 5858362 - 5858307
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| | ||  |||||||| ||||||||| ||||||||||||||||||||    
T  5858362 tttttcttcaaaatataaaaccctcatcatttgggaaactaaaaaattgtattgga 5858307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 8948625 - 8948723
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||| ||||||||||||||||||||||| | | ||||||          |||| ||||||||| ||||||||||||||| ||||||||    
T  8948625 aaaccctcgtcattttgggaactaaaaaattgtattggagacgagttttgagaggtttaagagggtttatatgacttcttcaaatttaatatatgttgt 8948723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 12319038 - 12318975
Alignment:
Q  106 ttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttg 169  Q
    ||||||||| || ||||||||||||| |||| |||||||||  |||||||||| |||| |||||    
T  12319038 ttcttcataataataaaccctcctcacttggagaactaaaattttgtattggagaaggattttg 12318975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 35856583 - 35856513
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| ||||||  ||||||||| | | ||||||||||||||||||||  ||||||| ||||    
T  35856583 ggaactaaaaaattg-attggatgagggttttgcaaggtttatatgaattcttcaaatcaaatctatattgt 35856513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 36837647 - 36837576
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtt 97  Q
    ||||||||| |||||||| ||| |  ||||| ||||||||||| ||||||| || ||| |||||||||||||    
T  36837647 gaaggtttgagaaaaaaggaataaataagtggaagaaatagaggaaaataggagaggagggctttgggggtt 36837576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 43007757 - 43007796
Alignment:
Q  169 ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  43007757 ggagggtttatatgaatttttcaaatttaatctatgttgt 43007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 1942082 - 1942036
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  1942082 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 1942036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 2474796 - 2474750
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  2474796 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 2474750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 4734525 - 4734479
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  4734525 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 4734479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 4873373 - 4873302
Alignment:
Q  86 gctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtattgga 158  Q
    |||||||||| |||||||||  ||||||| ||  |||||||||||||||| |||||||||| ||||| ||||||    
T  4873373 gctttggggggttaactttt--cttcataatatgaaaccctcctcatttgagggaactaaacaattgcattgga 4873302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 13865121 - 13865075
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| || ||| |||||||||||| |||||||||||||||||||||    
T  13865121 gggttatgaagggtttatatgaatttttcaaatttaatctatgttgt 13865075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 14641463 - 14641493
Alignment:
Q  176 ttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||||||||||||||||||||||||||    
T  14641463 ttatatgaattcttcaaatttaatctatgtt 14641493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 23963031 - 23963073
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||    
T  23963031 tttggagggtttatatgaatccttcaaatttaatatatgttgt 23963073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 34148643 - 34148564
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||| |||| ||||||| ||||||| |||||||  ||| |||||| ||  ||||||||||| |||||||| ||||||||||    
T  34148643 ctccttatttagggaactcaaaaattatattggaggaggtttttggggg--ttatatgaatttttcaaattcaatctatgtt 34148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 34272567 - 34272613
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  34272567 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 34272613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 7080073 - 7080018
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggattt 177  Q
    |||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||||    
T  7080073 aaaccctccttatttggg-aactaaaaaattgtattggaaga-ggttttggtggattt 7080018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 8228598 - 8228631
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaa 198  Q
    ||||||||| ||||||||||||||||||||||||    
T  8228598 ttttggagggtttatatgaattcttcaaatttaa 8228631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 13227763 - 13227808
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| ||| |||||||||||| |||||||||||| ||||||||    
T  13227763 ggttttgaagggtttatatgaattattcaaatttaatttatgttgt 13227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 22330742 - 22330791
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgtgat 211  Q
    ||||||| |||||||   || |||||||||||||||||||||||||||||    
T  22330742 gggttttagaggattgcaataaattcttcaaatttaatctatgttgtgat 22330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 40985103 - 40985066
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  40985103 gggttttggagggtttacatgaattcttcaaatttaat 40985066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 41455324 - 41455357
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||| ||||||||    
T  41455324 tttatatgaattcttcaaatttaatatatgttgt 41455357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 44879551 - 44879584
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| |||||||||||||||||||||||    
T  44879551 ctcctcatttagggaactaaaaaattgtattgga 44879584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 44880370 - 44880337
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattgga 158  Q
    |||||||||| |||||||||||||||||||||||    
T  44880370 ctcctcatttagggaactaaaaaattgtattgga 44880337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 3635647 - 3635611
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaata 65  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  3635647 ggttttggaaaaaagaaatgagcaagtgaaagaaata 3635611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 10605211 - 10605151
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaattta 197  Q
    |||||| ||| |||||||||||  |||||||| |||  ||||||||||||||| |||||||    
T  10605211 ggaactcaaatattgtattggatgagggttttcgagagtttatatgaattctttaaattta 10605151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 26042202 - 26042282
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatc 200  Q
    |||||||| || ||||  ||||| ||||||||||||| |   |||||| ||||| ||||||| |||||| |||||||||||    
T  26042202 aaaccctcatcgtttgcagaactcaaaaattgtattgaatgtgggtttgggagggtttatataaattctacaaatttaatc 26042282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 12423 - 12242
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||  |||||||| ||| ||||||| |||||| |||| |||||| ||||||||||| |||||||||  ||||||| ||  ||||||    
T  12423 gaaggtttgggaaaaaaagaatgagcaggtggaagaaattgagaaatataggaggggagggctttggggggttaactttt--cttcatattacaaaaccc 12326  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||  || |||||||||||||||||  ||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  12325 tcctcattggggataattaaaaaattgtattggaggaggtttttggatggtttatatgaattcttcaaatttaatctatgttgt 12242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 49668277 - 49668097
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||| | |||| | |||||||| |||| |||||||  ||||||| || |||||||    
T  49668277 gaaggtttgagaaaaaaggaatgagcaagtggaagaaatagagaaaaatgggagggtacggctttggaggtt-aactttt--cttcataatattaaaccc 49668181  T
Q  126 tcctcatttg-gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||  |||||||||||||||||||||||  |||||||||| || |||| ||||||| || ||||||||||||||||||    
T  49668180 tcctcatttaagggaactaaaaaattgtattggaggagggttttggggggtttacatgaattttttaaatttaatctatgttgt 49668097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 29114396 - 29114226
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||| |||||||||  ||||||| ||  |||||||||||||||||    
T  29114396 aaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggggttaactttt--cttcataatacaaaaccctcctcatttgg 29114299  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     ||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  29114298 aggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgt 29114226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 55509803 - 55509974
Alignment:
Q  34 gggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatt 133  Q
    |||||||||  |||||||||||| |||||||| |||||||| | ||||||  |||||||||||| |||||||  ||||||| ||  ||||  |  |||||    
T  55509803 gggaaaaaatgaatgagcaagtggaagaaataaagaaaaatgggaggggagagctttgggggtt-aactttt--cttcataatacaaaacatttttcatt 55509899  T
Q  134 tgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||| ||||||||||||||| ||| ||   |||||||||||| |||||||||||||||||||||||||||||||||    
T  55509900 tggaggaactaaaaaattgcatttgaggggggttttggagggtttatatgaattcttcaaatttaatctatgttg 55509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 45823468 - 45823643
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| | |||||||||| ||||||||||| ||||| | |||  | || ||| | || |||||  ||||||||||| ||  |||| |||||||    
T  45823468 ttgggaaaaaaggagtgagcaagtggaagaaatagaggaaaatgggaggtaagggttttagagggttaac--ttttcttcataatacaaaactctcctca 45823565  T
Q  132 tttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| |||| ||||||||||||| |  ||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  45823566 tttggggaaacttaaaaattgtattgaaggagggttttggagagtttatatgaattcttcaaatttaatttatgttgt 45823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 46177098 - 46176925
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcc 128  Q
    ||||| ||||||||  || || |||||| ||||||||||| | | | | |||||| || |||||||| ||||  |||||||| ||| ||  |||||||||    
T  46177098 ggttttggaaaaaaagaaggaacaagtggaagaaatagagtacattgggaggggagggttttggggggttaa--tttttcttaataatacaaaaccctcc 46177001  T
Q  129 tcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    |||||||| ||||||||||| ||||||||||  |||||||||| || |||||||||||| ||||||||||||||||    
T  46177000 tcatttggaggaactaaaaagttgtattggaggagggttttggggggtttatatgaatttttcaaatttaatctat 46176925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 47063692 - 47063780
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||  |||| ||||| ||||||||||||||||||| ||||||||    
T  47063692 aaaccctcctcatttggggaactaaaaaattgtattggaagaggatttgagagggtttatgtgaattcttcaaatttaatatatgttgt 47063780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 35959125 - 35959273
Alignment:
Q  48 gagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaa 146  Q
    ||||||||| ||||||||||| | | |   |||||| ||||||||||||||||  |||||||||||| ||  ||||||||||||||||||| ||||||||    
T  35959125 gagcaagtggaagaaatagagtacattgtgaggggagggctttgggggtttaa--tttttcttcataatacaaaaccctcctcatttgggggaactaaaa 35959222  T
Q  147 aattgtattggaaaagggttttggaggatttatatgaattcttcaaattta 197  Q
    | ||||||||||  || ||||||| || ||||||| |||||||||||||||    
T  35959223 agttgtattggaggagcgttttggggggtttatataaattcttcaaattta 35959273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 12709008 - 12708865
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||  ||| || ||||| ||||||||||| ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  ||||||    
T  12709008 gaaggcttgggaaaaaaagaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggggttaac--ttttcttcataatacaaaaccc 12708911  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  12708910 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 12708865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 30198934 - 30198803
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| ||| || ||||| ||||||||||| ||||||| || ||| ||||||||||| |||||  ||||||||||| ||  |||||||||||||||||    
T  30198934 aaaaaaggaataagtaagtggaagaaatagaggaaaataggagaggagggctttggggggttaac--ttttcttcataatacaaaaccctcctcatttgg 30198837  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttg 169  Q
     ||||||||||||||||||||||  |||||||||    
T  30198836 aggaactaaaaaattgtattggaggagggttttg 30198803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 38137008 - 38136866
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| ||| || ||||| ||||||||||| ||||| |||| ||| ||||||||||| ||||||||||  |||||| ||  ||||||    
T  38137008 gaaggcttgagaaaaaaggaataagtaagtggaagaaatagaggaaaatggaagaggagggctttggggggttaacttttt--ttcataatacaaaaccc 38136911  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttg 169  Q
    | ||||||||| ||||||||||||||||||||||  |||||||||    
T  38136910 ttctcatttggaggaactaaaaaattgtattggaggagggttttg 38136866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 31428810 - 31428899
Alignment:
Q  120 aaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||||| || |||||||||||||||||| | |||||||||||||||| ||||||||||  |||||||||||||||||    
T  31428810 aaaccctcttcatttgggggaattaaaaaattgtattggaagatggttttggaggatttacatgaattcttttaatttaatctatgttgt 31428899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 45971475 - 45971598
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| |||||||||||| ||||||||||| |||||   |||||| || |||||||| |||||  ||||||||||| || ||||||| |||||    
T  45971475 ttgggaaaaaaggaatgagcaagtggaagaaatagaggaaaatgagaggggagggttttggggg-ttaac--ttttcttcataatactaaaccc-cctca 45971570  T
Q  132 ttt-ggggaactaaaaaattgtattgga 158  Q
    ||| ||||||||||||||||||||||||    
T  45971571 tttgggggaactaaaaaattgtattgga 45971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 16318524 - 16318655
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||  ||| |||||  ||||||||||| ||  ||||||    
T  16318524 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttcaggggttaac--ttttcttcatattacaaaaccc 16318621  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||||||||||||||||||||||    
T  16318622 tcctcatttggaggaactaaaaaattgtattgga 16318655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 28175638 - 28175496
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||| || ||||| ||||||||||| ||||| | || ||| ||||||||| | |||||  ||||||||||| ||  ||| ||    
T  28175638 gaaggcttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaac--ttttcttcataatacaaaatcc 28175541  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttg 169  Q
    ||||||||||| |||||||||||||||||| |||  |||||||||    
T  28175540 tcctcatttggaggaactaaaaaattgtataggaggagggttttg 28175496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 13985046 - 13984966
Alignment:
Q  120 aaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaat 199  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||    
T  13985046 aaaccctcttcatttagtggaactaaaaaattgtattggaggagggttttggaggatttatatgagttcttctaatttaat 13984966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 368001 - 368155
Alignment:
Q  49 agcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaa 148  Q
    |||||||| ||||||||||| ||||||| || | | ||||||||||  ||||  |||||||||||| ||  ||||||||||||||||||| |    ||||    
T  368001 agcaagtggaagaaatagaggaaaataggagagaagggctttgggg--ttaa--tttttcttcataatacaaaaccctcctcatttgggggagctcaaaa 368096  T
Q  149 ttgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    || ||||| |  |||||||||| || || |||||||||||||||||||||| ||||||||    
T  368097 ttatattgaaggagggttttggggg-ttcatatgaattcttcaaatttaatttatgttgt 368155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 28880020 - 28880089
Alignment:
Q  139 aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| ||||||||| |  ||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  28880020 aactaaaatattgtattgaatgaggattttggaggatttatatgaattcttcaaatttaatatatgttgt 28880089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 49936498 - 49936600
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||||||| ||  ||| |||||| |||||||| ||||||||||||||||||||   ||| || | ||| ||||||||||||||||||||| ||||||    
T  49936498 ttttcttcataatacaaaatcctcctaatttgggggaactaaaaaattgtattgga---gggattagaagggtttatatgaattcttcaaattcaatcta 49936594  T
Q  203 tgttgt 208  Q
    ||||||    
T  49936595 tgttgt 49936600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 9020956 - 9021026
Alignment:
Q  132 tttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||||||| |||||||||||||||  ||||||||||| | |||  |||||||||||||||||||||||    
T  9020956 tttggggaactcaaaaattgtattggatgagggttttggaaggtttgcatgaattcttcaaatttaatcta 9021026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 33500427 - 33500557
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| ||| |||||||| |||||||||||| ||||||||||| ||||| | || ||| ||||||| ||  ||||||||   |||||||  |  ||||||    
T  33500427 gaaggcttgagaaaaaaggaatgagcaagtggaagaaatagaggaaaatgggagaggagggctttgaggagttaactttc--cttcataagacaaaaccc 33500524  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattgg 157  Q
    ||||||||||| |||||||||||| ||||||||    
T  33500525 tcctcatttggaggaactaaaaaaatgtattgg 33500557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 48417666 - 48417593
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| |||||||||||||||  ||| ||||||||| | ||||||||||||||||||| ||| ||||||||    
T  48417666 ggggaactcaaaaattgtattggaggaggattttggagggtctatatgaattcttcaaattcaatttatgttgt 48417593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 48620312 - 48620387
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggat--ttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||  |||||||||| ||    |||||||||||||||||||||||| ||||||||    
T  48620312 ggggaactaaaaaattgtattggaggagggttttgggggggggttatatgaattcttcaaatttaatatatgttgt 48620387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 52636677 - 52636786
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| | |||||||||| ||||||||||| | | | ||||  || ||||||||||| ||||  |||||||||||| ||  |||||||||||||||    
T  52636677 ggaaaaaaggactgagcaagtggaagaaatagagtacattggaagatgagggctttggggggttaa--tttttcttcataatataaaaccctcctcattt 52636774  T
Q  135 ggggaactaaaa 146  Q
    || |||||||||    
T  52636775 ggagaactaaaa 52636786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 42650602 - 42650686
Alignment:
Q  85 ggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||| |  |||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  42650602 ggctttgggggtttta--tttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttgg 42650686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 15498874 - 15498825
Alignment:
Q  121 aaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  15498874 aaccctcctcatttggggaactcaaaaattgtattggatgagggttttgg 15498825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 32948581 - 32948509
Alignment:
Q  136 gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||| ||||||||||||||   || ||| |||||| |||||||||||| |||||||| ||||||||||||    
T  32948581 gggaactcaaaaattgtattgggcgagagttatggagggtttatatgaatttttcaaattcaatctatgttgt 32948509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 51974311 - 51974415
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||| ||  ||| |||| |||||||||||||||| ||||||||||| |  ||| |||| || |  |||  ||||||| |||||||||||||||    
T  51974311 ttttcttcataatacaaaatcctcttcatttggggaactaacaaattgtattgaaggaggatttttgaagggttacgtgaattcatcaaatttaatctat 51974410  T
Q  204 gttgt 208  Q
    |||||    
T  51974411 gttgt 51974415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 24683068 - 24682985
Alignment:
Q  120 aaaccctcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||| ||||||||| ||| || |||||||||||| ||  |||||||| |||| |||  |||||||||||||||||||||||    
T  24683068 aaaccctactcatttggaggagctcaaaaattgtatttgaggagggttttagagggtttgcatgaattcttcaaatttaatcta 24682985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 37756878 - 37756706
Alignment:
Q  35 ggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcattt 134  Q
    ||||||||| || ||||||||| ||||||||||  | | | | ||| || |||||||| |||| |  ||||||  ||||| ||  ||| || ||||||||    
T  37756878 ggaaaaaaggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaa--ttttttactcataataaaaaatccccctcattt 37756781  T
Q  135 gggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||| ||||||||| |||||  ||||||| ||  | |||||||||||| |||||||| ||||||||||||    
T  37756780 gggggaactcaaaaattgtgttggaggagggtttcgggaggtttatatgaatttttcaaattcaatctatgttgt 37756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 56504497 - 56504446
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||| ||||| |||||||||||| |||||||| ||||||||||||||||||    
T  56504497 ggtttcggagggtttatatgaatttttcaaattcaatctatgttgtgatgat 56504446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 9119884 - 9119770
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggtttt---------ggaggatttatatgaattcttcaaa 193  Q
    |||||||||| | ||  |||| ||||||||||||| |||||||| |||||||||||  ||||||||         ||| |||||||||||||||||||||    
T  9119884 tttttcttcaaaatataaaactctcctcatttgggaaactaaaatattgtattggaggagggttttgagtatttgggaagatttatatgaattcttcaaa 9119785  T
Q  194 tttaatctatgttgt 208  Q
    |||||| || |||||    
T  9119784 tttaatatacgttgt 9119770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 24279966 - 24280012
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  24279966 gggttatggagggtttatatgaatttttcaaatttaatctatgttgt 24280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 41709291 - 41709161
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| || ||||||||| ||||||||||| |||||   | ||||  | |||||||| |||||  |||||||| || || |||||||    
T  41709291 gaaggcttgggaaaaaaggaacgagcaagtggaagaaatagaggaaaatgagatgggagagttttggggg-ttaac--ttttcttcgtaatattaaaccc 41709195  T
Q  126 tcctcatt-tggggaactaaaaaattgtattgga 158  Q
    || ||||| |||||||||||||| ||| ||||||    
T  41709194 tcttcattctggggaactaaaaatttgcattgga 41709161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 56426871 - 56426813
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttggggg 95  Q
    ||||||| |||||||||||| ||||||||||| || || |||||||| |||||||||||    
T  56426871 aaaaaaggaatgagcaagtggaagaaatagaggaacatggaaggggagggctttggggg 56426813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 8827848 - 8827803
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||    
T  8827848 ggttttagagggtttatatcaattcttcaaatttaatctatgttgt 8827803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 8828295 - 8828193
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||||||| ||  |||| ||||||||||| |||||| ||||||| || ||||  ||| ||| || |  ||||||||||||||| ||||||||||| |    
T  8828295 ttttcttcataatacaaaactctcctcatttgaggaactgaaaaattataatggaggaggatttggggg--tttatatgaattctttaaatttaatcttt 8828198  T
Q  204 gttgt 208  Q
    |||||    
T  8828197 gttgt 8828193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 21443005 - 21443074
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggag 172  Q
    |||||||||| | ||  |||||||||||||||| |||||||||||||| |||| || ||| |||||||||    
T  21443005 tttttcttcaaaatataaaaccctcctcatttgaggaactaaaaaattatattagagaagagttttggag 21443074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 40423089 - 40423056
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||||||||||||    
T  40423089 tttatatgaattcttcaaatttaatctatgttgt 40423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 45899405 - 45899446
Alignment:
Q  131 atttggggaactaaaaaattgtattggaaaagggttttggag 172  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  45899405 atttggggaactaaaaaattgtattggaggagggttttggag 45899446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 9836802 - 9836758
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgt 205  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||    
T  9836802 agggttttagagggtttatatgaattcttcaaagttaatctatgt 9836758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 16535749 - 16535789
Alignment:
Q  168 tggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  16535749 tggagggtttatatgaatttttcaaatttaatctatgttgt 16535789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 23708161 - 23708233
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    |||||||| ||||||||||||||   ||| || |||||| |||||||||||| |||||||  |||||||||||    
T  23708161 ggggaactcaaaaattgtattgggggaggattatggagggtttatatgaatttttcaaatccaatctatgttg 23708233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 15451364 - 15451325
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatcta 202  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  15451364 ggttttggagggtttacatgaattcttcaaatttaatcta 15451325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 47669861 - 47669908
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  47669861 agggttatggagggtttatatgaatttttcaaattcaatctatgttgt 47669908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 4442078 - 4442012
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtattggaaaagggtttt 168  Q
    |||||||||| | ||  |||||||||||||||| |||| ||| ||||||||||||||| ||||||||    
T  4442078 tttttcttcaaaatataaaaccctcctcatttgagggagctacaaaattgtattggaagagggtttt 4442012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 7182220 - 7182174
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  7182220 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 7182174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 16422965 - 16423007
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatg 204  Q
    ||||||| |||| |||| |||||||||||||||||||||||||    
T  16422965 gggttttagagggtttacatgaattcttcaaatttaatctatg 16423007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 20896569 - 20896451
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca-ttt 134  Q
    |||||||| | ||| |||||||||||||||||| ||||| | |||||| | |||| ||| ||||||    ||||||||| || ||||||||| | | |||    
T  20896569 gaaaaaagaattgaacaagtgaaagaaatagaggaaaatgggaggggaagacttt-gggatttaac----ttcttcataatactaaaccctcataacttt 20896475  T
Q  135 ggggaactaaaaaattgtattgga 158  Q
    || |||||||||||||| ||||||    
T  20896474 ggagaactaaaaaattgcattgga 20896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 28710441 - 28710399
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  28710441 tttggaagatttatatgaattcttcaaattcaatttatgttgt 28710399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32649033 - 32648987
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||| | |||||||||||| |||||||||||||||||||||    
T  32649033 gggttatggaaggtttatatgaatttttcaaatttaatctatgttgt 32648987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 50494684 - 50494638
Alignment:
Q  161 agggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    |||||||||  || ||||||||||||||||||||||||| |||||||    
T  50494684 agggttttgaggggtttatatgaattcttcaaatttaatttatgttg 50494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 54806530 - 54806568
Alignment:
Q  170 gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  54806530 gaggatttatatgaatttttcaaattcaatctatgttgt 54806568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 13270303 - 13270258
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||||    
T  13270303 ggttatggagggtttatatgaatttttcaaattcaatctatgttgt 13270258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 46670044 - 46669991
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtatt 155  Q
    |||||||||| | ||  |||||||||||||||| ||||||||||||||||||||    
T  46670044 tttttcttcaaaatataaaaccctcctcatttgagggaactaaaaaattgtatt 46669991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 51258793 - 51258724
Alignment:
Q  137 ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||| |||||||| ||||||  | | ||||||||||||||||  ||||||||||||| ||| ||||||    
T  51258793 ggaactcaaaaattgcattggatgaagattttggaggatttatacaaattcttcaaattcaatttatgtt 51258724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 52430591 - 52430558
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||||||||||||| ||||||||    
T  52430591 tttatatgaattcttcaaatttaatatatgttgt 52430558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 52594654 - 52594609
Alignment:
Q  163 ggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||| |||||||||||| ||||||| |||||||||||||    
T  52594654 ggttatggagggtttatatgaatttttcaaatctaatctatgttgt 52594609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 55813701 - 55813668
Alignment:
Q  126 tcctcatttggggaactaaaaaattgtattggaa 159  Q
    |||||||||||| |||||||||||||||||||||    
T  55813701 tcctcatttgggaaactaaaaaattgtattggaa 55813668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 11976891 - 11976935
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||| |||||||||||| || ||||||||| ||||||||    
T  11976891 gttttggagggtttatatgaattttttaaatttaatatatgttgt 11976935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 21081332 - 21081388
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg-aactaaaaaattgtattgga 158  Q
    ||||||||||||  |  ||||||||||||||||||| |||| |||||||||||||||    
T  21081332 tttttcttcataaaacaaaaccctcctcatttggggtaacttaaaaattgtattgga 21081388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 32060704 - 32060744
Alignment:
Q  168 tggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  32060704 tggagggtttatatgaatttttcaaattcaatctatgttgt 32060744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 32866747 - 32866711
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgtgat 211  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  32866747 tttatatgaattattcaaatttaatctatgttatgat 32866711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 36553860 - 36553796
Alignment:
Q  138 gaactaaaaaattgtattggaaaagggttttgg-aggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||||||||||| ||  ||||||| || ||| ||||||||||||||| |||| ||||||    
T  36553860 gaactaaaaaattgtatttgagtagggtttagggagggtttatatgaattctttaaatataatct 36553796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 54135878 - 54135822
Alignment:
Q  141 ctaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaattta 197  Q
    ||||||| ||||||||||  ||| |||||||  |||||||||||||||| |||||||    
T  54135878 ctaaaaagttgtattggacgaggattttggattatttatatgaattctttaaattta 54135822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 20820693 - 20820523
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||| ||||| |||||| |||||||| |||||||| | |||||| ||||||||||| |||||||||  ||||||| || ||||| |||||| ||||    
T  20820693 gaaaaaag-aatgaacaagtggaagaaataaagaaaaatgggaggggagggctttggggggttaactttt--cttcataatactaaactctcctcgtttg 20820597  T
Q  136 ggg-aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||| ||||||||||||||||||||  || ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  20820596 ggggaactaaaaaattgtattggatgagagttttagaggatttatatgaatttttcaaatttaatatatgttgt 20820523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 208
Target Start/End: Original strand, 26713773 - 26713951
Alignment:
Q  29 ggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagta-gtaaaccctc 127  Q
    ||||| |||| |||| || ||||||||| ||||||||||| | | | | |||||| ||||||| ||| ||||  |||||||||||  || | ||| ||||    
T  26713773 ggttttggaataaaggaaggagcaagtggaagaaatagagtacattgggaggggagggctttgaggggttaa--tttttcttcatgataagaaaatcctc 26713870  T
Q  128 ctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  26713871 ctcatttggggaactcaaaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttattctatgttgt 26713951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 208
Target Start/End: Complemental strand, 32719541 - 32719369
Alignment:
Q  34 gggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatt 133  Q
    |||||||||| ||| || ||||| ||||||||||| ||||| | |  ||| ||||||||||||| |||||||  ||||||| ||  ||||||||||||||    
T  32719541 gggaaaaaaggaataagtaagtggaagaaatagaggaaaatgggaaaggagggctttgggggtt-aactttt--cttcataatacaaaaccctcctcatt 32719445  T
Q  134 tgg-ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||| ||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  32719444 tggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgt 32719369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 33590501 - 33590314
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||||||| ||| |||| ||||||||||||||| |||||||| ||||| | |||||| |  |||||||| |||||||||  ||||||| ||  ||||||    
T  33590501 gaaggtttgagaagaaaggaatgagcaagtgaaaaaaatagaggaaaatgggaggggaggattttggggggttaactttt--cttcataatacaaaaccc 33590404  T
Q  126 tcctcatttggggaactaaaaaattgtattggaaaa---------gggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||||||||||| ||||||||||||||||||  |         |||||||||||| || |||||||||||||||||||||||||||||    
T  33590403 tcctcatttggggagctaaaaaattgtattggatgagggttttgggggttttggagggttaatatgaattcttcaaatttaatctatgtt 33590314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 1567188 - 1567379
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| || ||||||||| |||||||||||| ||||||||||  ||||| | || |||  |||||||||| |||||  ||||||||||| ||  ||||||    
T  1567188 gaaggcttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaac--ttttcttcataatacaaaaccc 1567285  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||| ||||||||||||||||||||||  |          |||||||||||| || ||| |||||||||||||||||| ||||||||    
T  1567286 tcctcatttggaggaactaaaaaattgtattggatgagggattttgggggttttggagggttaataagaattcttcaaatttaatttatgttgt 1567379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 33212264 - 33212418
Alignment:
Q  51 caagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaaaaaatt 150  Q
    |||||||||||||||||||| | | |||||||| ||||||| ||| ||||  ||| |||||||| ||  | || || |||||||||||||||||||| ||    
T  33212264 caagtgaaagaaatagagaatattggaaggggaaggctttgaggggttaa--tttgtcttcataatacaacactctgctcatttggggaactaaaaagtt 33212361  T
Q  151 gtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||  | |||||| | || |||||||||||||||||||||||||  |||||||    
T  33212362 gtattggatgacggtttt-gtgggtttatatgaattcttcaaatttaatacatgttgt 33212418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 11180332 - 11180187
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| |||||||||||  ||||||||||| ||||| | |  ||| ||||||||||| |||||  |||||| |||| ||  ||||||    
T  11180332 gaaggcttgggaaaaaaggaatgagcaagtagaagaaatagaggaaaatggga-aggagggctttggggggttaac--ttttctccataatacaaaaccc 11180236  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttggagg 173  Q
    ||||||||||| ||||||||| ||||||||||| | |||||||||||||    
T  11180235 tcctcatttggaggaactaaagaattgtattggtagagggttttggagg 11180187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 28552048 - 28551878
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| |||||||||||| ||||||||||  ||||| | |||||||||||||| ||| ||| |  ||||||||||| ||  |||| ||||||||||||    
T  28552048 aaaaaaggaatgagcaagtggaagaaatagaagaaaatgggaggggatggctttgaggggttagc--ttttcttcataatacaaaactctcctcatttgg 28551951  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     | ||||| ||| ||||||||   | || ||||||  | ||||||||||||||||||||||||| ||||||||    
T  28551950 agaaactataaatttgtattgaggagggtttttgggaggtttatatgaattcttcaaatttaatttatgttgt 28551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 207
Target Start/End: Original strand, 32221920 - 32222099
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||  ||| |||||||| |||||||| ||||||||||||| ||| || |||| ||| |||||  ||||||| ||| ||  |||| |||||||||||    
T  32221920 gaaaaaaagaataagcaagtggaagaaataaagaaaaatagaagaggagggttttgaggggttaac--ttttctttataatatcaaactctcctcatttg 32222017  T
Q  136 g-ggaactaaaaaattgtattgga---------aaagggttttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    | ||||||||||||||||||||||          | || ||||||||| |||||||||||||||||||||||| ||||||||    
T  32222018 gaggaactaaaaaattgtattggaggagagttttagggattttggagggtttatatgaattcttcaaatttaaactatgttg 32222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 13380522 - 13380626
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttgggg--aactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatc 200  Q
    |||||||||||| ||  ||| | |||||||||||||  |||| |||||||||||||||| ||||||||||||  |||| || ||||||||||||||||||    
T  13380522 tttttcttcataatataaaatcatcctcatttggggggaactcaaaaattgtattggaagagggttttggagcgtttacataaattcttcaaatttaatc 13380621  T
Q  201 tatgt 205  Q
    |||||    
T  13380622 tatgt 13380626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 33755044 - 33755137
Alignment:
Q  116 tagtaaaccctcctcatttggggaa-ctaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||  |||| ||||| || |||||||||||| |||||| ||||||||||||||    
T  33755044 tagtaaaccttcctcatttggggaaactaaacaattgtattggaggagggctttggggggtttatatgaattattcaaaattaatctatgttgt 33755137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 24875100 - 24874966
Alignment:
Q  32 ttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctca 131  Q
    |||||||||||| ||| ||||| || |||||||| |  ||||| | |||||| ||||||||||||  |||||||  ||||||| || ||||||| |||||    
T  24875100 ttgggaaaaaaggaataagcaaatggaagaaatataagaaaatgggaggggagggctttgggggtc-aactttt--cttcataatactaaaccc-cctca 24875005  T
Q  132 tttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||||||| |||||||||||  ||||||||||    
T  24875004 tttggggaactaaaacattgtattggaggagggttttgg 24874966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 33065900 - 33065832
Alignment:
Q  146 aaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||| |||||||| || |||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  33065900 aaattctattggaagagagttttgaaggatttatatgaatttttaaaatttaatctatgttgtgatgat 33065832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 29054586 - 29054660
Alignment:
Q  129 tcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctat 203  Q
    ||||||| |||||||||||||||||||| |  ||| |||| |||| |||||||||||| ||||||||||||||||    
T  29054586 tcatttgaggaactaaaaaattgtattgaatgaggatttttgagggtttatatgaatttttcaaatttaatctat 29054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 19477310 - 19477354
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  19477310 gttttggaagatttatatgaattcttcaaatttaatctatgttgt 19477354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 25072585 - 25072516
Alignment:
Q  136 gggaactaaaaaattgtattggaaaag-ggttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    |||||| |||||||||||||  ||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  25072585 gggaacaaaaaaattgtatt--aaaagaggttttggagggtttatacgaattcttcaaatttaatctatgtt 25072516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 6688118 - 6688048
Alignment:
Q  119 taaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattctt 189  Q
    ||||| ||||| |||| |||||||||||||||||||||||  || ||||||| || |||||||||||||||    
T  6688118 taaactctccttatttagggaactaaaaaattgtattggaggagagttttggggggtttatatgaattctt 6688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 26289607 - 26289649
Alignment:
Q  166 tttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  26289607 tttgaaggatttatatgaattcttcaaatttaatctatgttgt 26289649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 33184197 - 33184247
Alignment:
Q  120 aaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  33184197 aaaccctcctcatttgaggaactaaaaaattgtattagaagagggttttgg 33184247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 4027091 - 4027026
Alignment:
Q  128 ctcatttggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaa 193  Q
    ||||||| ||||||||||||||| ||| |||  |||||||| ||||||||||||||||| ||||||    
T  4027091 ctcatttagggaactaaaaaattatatcggaggagggtttttgaggatttatatgaatttttcaaa 4027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 12779423 - 12779611
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||| ||||||| |||||||||||  || |||||||| ||||| | | || | ||||||||||||| |||||||  |||| || ||  ||||||    
T  12779423 gaaggtttggaaaaaaaggaatgagcaagtagaataaatagaggaaaatgggaagg-agggctttgggggtt-aactttt--cttcgtactacaaaaccc 12779518  T
Q  126 tcctcatttgggg-aactaaaaaattgtattggaaaaggg---------ttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    | || |||||||| ||||||||| ||||||||||  ||||         ||||||||| || ||| |||||||||||||||||||||||||||    
T  12779519 ttcttatttgggggaactaaaaagttgtattggaggagggttttggagattttggagggttaataagaattcttcaaatttaatctatgttgt 12779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 6855542 - 6855670
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||| ||||||| ||||||||| ||||| |||||||| ||||| | |||| |  |||||||||| |||||||||  ||||||| || ||||||     
T  6855542 gaaggcttggaaaaaaag-aatgagcaaatgaaataaatagaggaaaatgggagggaagagctttggggggttaactttt--cttcataatattaaacct 6855638  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattg 156  Q
      ||| ||||| ||||||||||||||||||||    
T  6855639 atctcgtttggaggaactaaaaaattgtattg 6855670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 4464946 - 4464992
Alignment:
Q  121 aaccctcctcatttggggaactaaaaaattgtattggaaaagggttt 167  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||    
T  4464946 aaccttcctcatttggggaactaaaaaattgtattggaggagggttt 4464992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 15615722 - 15615763
Alignment:
Q  165 ttttggaggatttatatgaattcttcaaatttaatctatgtt 206  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  15615722 ttttggagggtttatatgaattcttcaaatttaatctttgtt 15615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 20381921 - 20381849
Alignment:
Q  135 ggggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| |||||||||||||| |  |||| ||||| ||| |||||||||||||||||| |||||| ||||||||    
T  20381921 ggggaattaaaaaattgtattcgtgaagg-ttttgaagggtttatatgaattcttcaattttaatatatgttgt 20381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 22788680 - 22788546
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||||||||| |||||| ||||||| ||| ||||| | | || |||||||    || |||||||||  ||| ||| ||  |||| || ||||||||     
T  22788680 aaaaaagtaatgaacaagtggaagaaatggaggaaaatgggaaggaatggcttaaatggattaactttt--cttgataatacaaaactcttctcatttga 22788583  T
Q  137 ggaactaaaaaattgtattggaaaagggttttggagg 173  Q
    ||||||||||||||||||||||  |||||||| ||||    
T  22788582 ggaactaaaaaattgtattggaggagggttttagagg 22788546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 4089495 - 4089428
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||| | ||  |||| ||||||||||| |||||||| ||||||||||||| |||| ||||||    
T  4089495 tttttcttcaaaatataaaactctcctcatttgaggaactaagaaattgtattggagaaggattttgg 4089428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 1029345 - 1029391
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  1029345 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 1029391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 24734932 - 24734978
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  24734932 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 24734978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 31345387 - 31345354
Alignment:
Q  175 tttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| |||||||||||||||||||||    
T  31345387 tttatatgaatttttcaaatttaatctatgttgt 31345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 6671427 - 6671475
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaat 74  Q
    ||||| |||||||||| | |||||||||||| ||||||||||| |||||    
T  6671427 gaaggcttgggaaaaatgaaatgagcaagtggaagaaatagaggaaaat 6671475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 3170 - 3337
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| |||||||||||  |||||||||||||||||   |  ||| ||||||||||||| ||||||||||   ||| ||  ||| |||||||||||||    
T  3170 aaaaaaggaatgagcaagtagaagaaatagagaaaaatgagattgga-ggctttgggggtt-aacttttttc---ataatacaaaatcctcctcatttgg 3264  T
Q  137 ggaact-aaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||| ||||||||||||| || ||| ||||| |||| |||||| ||||||||||| |||||||||||||||    
T  3265 ggaacttaaaaaattgtattagagaagagttttagagggtttatacgaattcttcaattttaatctatgttgt 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 26286 - 26414
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    ||||| |||||||||||| ||| || ||||| ||||||||||| ||||| | || ||| |||||||||||  ||||  ||||||||||| ||  ||||||    
T  26286 gaaggcttgggaaaaaaggaataagtaagtggaagaaatagaggaaaatgggagaggagggctttggggggataac--ttttcttcataatacaaaaccc 26383  T
Q  126 tcctcatttgg-ggaactaaaaaattgtatt 155  Q
    ||||||||||| |||||||||||||||||||    
T  26384 tcctcatttggaggaactaaaaaattgtatt 26414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 26432 - 26478
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||| || ||| |||||||||||||||||| ||||||||    
T  26432 gggttttggagggttaataagaattcttcaaatttaatttatgttgt 26478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 2186 - 2066
Alignment:
Q  36 gaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttg 135  Q
    |||||||| |||||||||||| ||||||||||  ||||| | || ||| ||||||||||| |||||  ||||||||||| ||  ||||||||||||||||    
T  2186 gaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaac--ttttcttcataatacaaaaccctcctcatttg 2090  T
Q  136 g-ggaactaaaaaattgtattgga 158  Q
    | |||||| |||||||||||||||    
T  2089 gaggaactgaaaaattgtattgga 2066  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 2050 - 2006
Alignment:
Q  164 gttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||| || ||| |||||||||||||||||| ||||||||    
T  2050 gttttggagggttaataagaattcttcaaatttaatttatgttgt 2006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 29153 - 29342
Alignment:
Q  27 aaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccct 126  Q
    ||||||| ||||||||| |||||||||||| ||||||||||  ||||| | || | | ||||||| ||| |||||  ||||||||||| ||  |||||||    
T  29153 aaggtttaggaaaaaaggaatgagcaagtggaagaaatagaagaaaatgggagagaagggctttgaggg-ttaac--ttttcttcataatacaaaaccct 29249  T
Q  127 cctcatttgg-ggaactaaaaaattgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    | |||||||| ||||||||||||||||||||||  |          |||||||||||| || ||| |||||||||||||||||| ||||||||    
T  29250 catcatttggaggaactaaaaaattgtattggaggaaggatttggggggttttggagggttaataagaattcttcaaatttaatttatgttgt 29342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 346 - 179
Alignment:
Q  49 agcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg-ggaactaaaaa 147  Q
    |||||||| ||||||||||| ||||| | || |||  |||||||||||| |||||||  ||||||| ||  |||||||||| |||||| |||||||||||    
T  346 agcaagtggaagaaatagaggaaaatgggagaggagagctttgggggtt-aactttt--cttcataatacaaaaccctccttatttggaggaactaaaaa 250  T
Q  148 attgtattggaaaa----------gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||||||||||  |          |||||||||||| || ||| |||||||||||||||||||||||||||    
T  249 attgtattggaggagggttttgcggggttttggagggttaataagaattcttcaaatttaatctatgttgt 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 17572 - 17490
Alignment:
Q  127 cctcatttggggaactaaaaaattgtattggaaaagggtttt-ggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||| ||||||||||||||||||  ||  || ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  17572 cctcgtttgaggaactaaaaaattgtatccgaggagtgttttaggaggatttatatgaattcttcaaatttaatatatgttgt 17490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 93680 - 93537
Alignment:
Q  26 gaaggtttgggaaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccc 125  Q
    |||||||||||||||||| ||| || ||||| |||||||| || || ||   || |||  | |||||||| |||||||||  ||||||| ||  |||| |    
T  93680 gaaggtttgggaaaaaaggaataagtaagtggaagaaataaaggaagatgacagaggagtgttttggggggttaactttt--cttcataatacaaaactc 93583  T
Q  126 tcctcatttgg-ggaactaaaaaattgtattggaaaagggttttgg 170  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  93582 tcctcatttggaggaactaaaaaattgtattggaggagggttttgg 93537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 37047 - 37219
Alignment:
Q  45 aatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaa 144  Q
    |||||||||||| ||||||| ||| ||||| ||||  || | ||||||||| ||||||| | |  ||||| |  ||||||||| ||||||||||||||||    
T  37047 aatgagcaagtggaagaaatcgaggaaaatggaagaagaggactttggggggttaacttatat--tcataatgctaaaccctcatcatttggggaactaa 37144  T
Q  145 aaaa-ttgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    |||| |||||||| |  |||||||||          |||| ||||||||||||||||||||||||| ||||||||    
T  37145 aaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaatatatgttgt 37219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 30381 - 30542
Alignment:
Q  45 aatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttggggaactaa 144  Q
    |||||||||||| ||||||| ||| ||||| ||||  || || |||||||| ||||||| | |  ||||| |  |||||| |||||||||||||||||||    
T  30381 aatgagcaagtggaagaaatcgaggaaaatggaagaagagggttttggggggttaacttatat--tcataatgctaaacc-tcctcatttggggaactaa 30477  T
Q  145 aaaa-ttgtattggaaaagggttttg----------gaggatttatatgaattcttcaaatttaa 198  Q
    |||| |||||||| |  |||||||||          |||| ||||||||||||||||||||||||    
T  30478 aaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaa 30542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 6920 - 6740
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| || ||||||| | || |||||||||||||| | |||||| ||  ||||  | |||||||||  ||||||| ||  |||||||||||||||||    
T  6920 aaaaaaggaacgagcaagcggaaaaaatagagaaaaatgggaggggagggaattggaaggttaactttt--cttcataatacaaaaccctcctcatttgg 6823  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttgg----------aggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     |||||||||| |||||||||||  ||||||||||          ||| || |||||||||||||||||||||||||| ||||    
T  6822 aggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaaatttaatctatcttgt 6740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 7903 - 7723
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    ||||||| || ||||||| | || |||||||||||||| | |||||| ||  ||||  | |||||||||  ||||||| ||  |||||||||||||||||    
T  7903 aaaaaaggaacgagcaagcggaaaaaatagagaaaaatgggaggggagggaattggaaggttaactttt--cttcataatacaaaaccctcctcatttgg 7806  T
Q  137 -ggaactaaaaaattgtattggaaaagggttttgg----------aggatttatatgaattcttcaaatttaatctatgttgt 208  Q
     |||||||||| |||||||||||  ||||||||||          ||| || |||||||||||||||||||||||||| ||||    
T  7805 aggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaaatttaatctatcttgt 7723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 788 - 734
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||  |||||||||||||||| |||||||||| ||||| |||||    
T  788 ttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgtcttgga 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 3665 - 3611
Alignment:
Q  104 ttttcttcatagtagtaaaccctcctcatttggggaactaaaaaattgtattgga 158  Q
    ||||||||||| ||  |||||||||||||||| |||||||||| ||||| |||||    
T  3665 ttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgtcttgga 3611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 82778 - 82877
Alignment:
Q  103 tttttcttcatagtagtaaaccctcctcatttg-gggaactaaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatct 201  Q
    |||||||||||| ||  ||| |||||| ||||| |||||||  ||||||||||||||  | | ||||||||| |||||||||| |||||||||| |||||    
T  82778 tttttcttcataatacaaaatcctcctaatttgagggaactccaaaattgtattggaggatgattttggagggtttatatgaactcttcaaattcaatct 82877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 19464 - 19400
Alignment:
Q  143 aaaaaattgtattggaaaagggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||||||| |||| |||||| || |||||||||||||||| |||| ||||||||||||    
T  19464 aaaaagttgtattggagaaggattttggtgggtttatatgaattcttc-aattaaatctatgttgt 19400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 15922 - 15974
Alignment:
Q  125 ctcctcatttggggaactaaaaaattgtattggaaaagggttttggaggattt 177  Q
    |||||||||||||||| | |||||||||||||||  |||||||||| ||||||    
T  15922 ctcctcatttggggaatttaaaaattgtattggaggagggttttgggggattt 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 9478 - 9436
Alignment:
Q  128 ctcatttggggaactaaaaaattgtattggaaaagggttttgg 170  Q
    |||||||||||||||||||||||||| ||||  ||||||||||    
T  9478 ctcatttggggaactaaaaaattgtactggaggagggttttgg 9436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 35484 - 35438
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  35484 gggttatggagggtttatatgaatttttcaaattcaatctatgttgt 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 45072 - 44985
Alignment:
Q  45 aatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtttaacttttttcttcatagtagtaaaccctcctcatttgg 136  Q
    |||||||||||  ||||||||||| ||||| | |||||||| |||| ||||||||||   |||||||||| ||  |||| ||||||||||||    
T  45072 aatgagcaagtagaagaaatagaggaaaatgggaggggatgacttt-ggggtttaac---tttcttcataatacaaaactctcctcatttgg 44985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1163 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 1976 - 2036
Alignment:
Q  37 aaaaaagtaatgagcaagtgaaagaaatagagaaaaatagaaggggatggctttgggggtt 97  Q
    ||||||| || ||||||||| ||||||||||  ||||| | |||||| |||||||||||||    
T  1976 aaaaaaggaaggagcaagtggaagaaatagaagaaaatgggaggggagggctttgggggtt 2036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 2925 - 2893
Alignment:
Q  176 ttatatgaattcttcaaatttaatctatgttgt 208  Q
    ||||||||||||||| |||||||||||||||||    
T  2925 ttatatgaattcttcgaatttaatctatgttgt 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 7128 - 7168
Alignment:
Q  167 ttggaggatttatatgaattcttcaaatttaatctatgttg 207  Q
    ||||||| |||||||||||| || |||||||||||||||||    
T  7128 ttggagggtttatatgaattttttaaatttaatctatgttg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 4330 - 4382
Alignment:
Q  162 gggttttggaggatttatatgaattcttcaaatttaatctatgttgtgatgat 214  Q
    ||||||| ||||||||||||||||| |||||||| || | | |||||||||||    
T  4330 gggttttagaggatttatatgaatttttcaaattcaaccaacgttgtgatgat 4382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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