View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12298_low_8 (Length: 232)

Name: NF12298_low_8
Description: NF12298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12298_low_8
NF12298_low_8
[»] chr5 (18 HSPs)
chr5 (1-215)||(30888543-30888757)
chr5 (4-39)||(39025664-39025699)
chr5 (2-36)||(11113063-11113097)
chr5 (2-40)||(14692484-14692522)
chr5 (3-41)||(28137369-28137407)
chr5 (2-39)||(7468395-7468432)
chr5 (4-37)||(9111357-9111390)
chr5 (3-36)||(39731331-39731364)
chr5 (4-45)||(43446947-43446988)
chr5 (4-40)||(1055885-1055921)
chr5 (3-39)||(4000972-4001008)
chr5 (2-38)||(12444706-12444742)
chr5 (3-39)||(26020308-26020344)
chr5 (3-39)||(26910449-26910485)
chr5 (1-37)||(31703932-31703968)
chr5 (3-39)||(34448489-34448525)
chr5 (3-35)||(34598149-34598181)
chr5 (1-41)||(40509471-40509511)
[»] chr1 (29 HSPs)
chr1 (2-45)||(24973034-24973077)
chr1 (2-45)||(31880234-31880277)
chr1 (3-45)||(44734107-44734149)
chr1 (1-42)||(22888210-22888251)
chr1 (1-42)||(28868003-28868044)
chr1 (2-47)||(39711514-39711559)
chr1 (3-43)||(47843871-47843911)
chr1 (2-45)||(20748448-20748491)
chr1 (2-45)||(20754305-20754348)
chr1 (2-44)||(3751338-3751380)
chr1 (3-45)||(15368988-15369030)
chr1 (4-42)||(17935186-17935224)
chr1 (2-39)||(538486-538523)
chr1 (4-37)||(9839966-9839999)
chr1 (2-39)||(10556067-10556104)
chr1 (3-36)||(17337968-17338001)
chr1 (3-40)||(38163360-38163397)
chr1 (4-45)||(41411439-41411480)
chr1 (2-39)||(41885056-41885093)
chr1 (3-39)||(2969680-2969716)
chr1 (4-40)||(3792904-3792940)
chr1 (2-34)||(4369214-4369246)
chr1 (4-36)||(10555599-10555631)
chr1 (3-35)||(14083013-14083045)
chr1 (4-36)||(23529893-23529925)
chr1 (2-38)||(34639119-34639155)
chr1 (2-38)||(39368028-39368064)
chr1 (2-42)||(46939202-46939242)
chr1 (4-44)||(49579938-49579978)
[»] chr4 (23 HSPs)
chr4 (142-215)||(19656510-19656583)
chr4 (2-42)||(27553009-27553049)
chr4 (4-44)||(38992069-38992109)
chr4 (2-45)||(8080064-8080107)
chr4 (136-215)||(19873156-19873235)
chr4 (1-36)||(26918239-26918274)
chr4 (3-37)||(16946627-16946661)
chr4 (3-45)||(19689439-19689481)
chr4 (4-38)||(28985393-28985427)
chr4 (2-40)||(51042237-51042275)
chr4 (2-39)||(22023711-22023748)
chr4 (2-35)||(29097542-29097575)
chr4 (4-37)||(55172660-55172693)
chr4 (2-38)||(1924526-1924562)
chr4 (4-40)||(6786447-6786483)
chr4 (3-39)||(8168932-8168968)
chr4 (4-36)||(24650419-24650451)
chr4 (3-39)||(29772008-29772044)
chr4 (2-38)||(31143397-31143433)
chr4 (3-35)||(34101040-34101072)
chr4 (7-39)||(43201546-43201578)
chr4 (2-42)||(44917472-44917512)
chr4 (2-34)||(55244237-55244269)
[»] chr8 (22 HSPs)
chr8 (6-45)||(45434486-45434525)
chr8 (1-39)||(35213374-35213412)
chr8 (3-44)||(2828490-2828531)
chr8 (2-38)||(10673417-10673453)
chr8 (2-42)||(40713890-40713930)
chr8 (1-36)||(11127038-11127073)
chr8 (3-41)||(5096351-5096389)
chr8 (4-42)||(9375732-9375770)
chr8 (4-46)||(23796925-23796967)
chr8 (3-40)||(1172771-1172808)
chr8 (3-40)||(2289032-2289069)
chr8 (2-35)||(22199626-22199659)
chr8 (1-38)||(23247815-23247852)
chr8 (4-45)||(36683116-36683157)
chr8 (2-39)||(37120797-37120834)
chr8 (2-39)||(38389897-38389934)
chr8 (2-39)||(40714359-40714396)
chr8 (2-42)||(11169735-11169775)
chr8 (2-42)||(27140957-27140997)
chr8 (2-38)||(33292300-33292336)
chr8 (2-38)||(35034669-35034705)
chr8 (2-38)||(42641385-42641421)
[»] chr2 (28 HSPs)
chr2 (3-42)||(29134049-29134088)
chr2 (4-45)||(6532036-6532077)
chr2 (3-38)||(6376743-6376778)
chr2 (3-42)||(27252001-27252040)
chr2 (2-45)||(44537885-44537928)
chr2 (2-36)||(12611681-12611715)
chr2 (4-42)||(17420385-17420423)
chr2 (3-44)||(9437497-9437538)
chr2 (3-36)||(10590748-10590781)
chr2 (2-39)||(16064943-16064980)
chr2 (2-39)||(21108480-21108517)
chr2 (2-35)||(21971072-21971105)
chr2 (4-45)||(26648740-26648781)
chr2 (1-42)||(27277544-27277585)
chr2 (2-39)||(27278017-27278054)
chr2 (2-39)||(27306009-27306046)
chr2 (6-43)||(30784564-30784601)
chr2 (4-41)||(38305965-38306002)
chr2 (4-45)||(39545312-39545353)
chr2 (4-41)||(40957502-40957539)
chr2 (2-39)||(41312373-41312410)
chr2 (15-44)||(42185626-42185655)
chr2 (2-39)||(45070274-45070311)
chr2 (3-39)||(8811056-8811092)
chr2 (4-40)||(12851746-12851782)
chr2 (2-42)||(27306457-27306497)
chr2 (3-39)||(33809844-33809880)
chr2 (2-38)||(40019848-40019884)
[»] chr3 (25 HSPs)
chr3 (2-39)||(160535-160572)
chr3 (1-42)||(34330762-34330803)
chr3 (2-39)||(43081601-43081638)
chr3 (4-39)||(8398896-8398931)
chr3 (2-41)||(23550646-23550685)
chr3 (3-42)||(31401685-31401724)
chr3 (2-41)||(42880113-42880152)
chr3 (2-36)||(3135768-3135802)
chr3 (3-41)||(7923256-7923294)
chr3 (2-40)||(14745515-14745553)
chr3 (2-36)||(16129006-16129040)
chr3 (1-39)||(31311358-31311396)
chr3 (2-36)||(43862527-43862561)
chr3 (1-39)||(54851358-54851396)
chr3 (4-37)||(25396746-25396779)
chr3 (2-39)||(40853184-40853221)
chr3 (1-38)||(42629243-42629280)
chr3 (2-39)||(47742722-47742759)
chr3 (3-36)||(52083046-52083079)
chr3 (2-38)||(3136203-3136239)
chr3 (3-39)||(16012893-16012929)
chr3 (1-41)||(23804026-23804066)
chr3 (3-39)||(43630685-43630721)
chr3 (2-46)||(51949416-51949460)
chr3 (2-38)||(53594795-53594831)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-38)||(36320-36356)
[»] chr7 (26 HSPs)
chr7 (3-39)||(41014017-41014053)
chr7 (2-42)||(48154496-48154536)
chr7 (2-37)||(1694390-1694425)
chr7 (1-40)||(24463708-24463747)
chr7 (2-41)||(43542670-43542709)
chr7 (3-41)||(584852-584890)
chr7 (3-41)||(2007223-2007261)
chr7 (1-39)||(18564270-18564308)
chr7 (3-45)||(21751996-21752038)
chr7 (1-38)||(30256085-30256122)
chr7 (2-39)||(32860684-32860721)
chr7 (2-43)||(43185027-43185068)
chr7 (2-35)||(46613349-46613382)
chr7 (1-41)||(1599046-1599086)
chr7 (4-44)||(11290582-11290622)
chr7 (2-38)||(11887484-11887520)
chr7 (3-35)||(15076575-15076607)
chr7 (1-37)||(24406950-24406986)
chr7 (4-36)||(25968069-25968101)
chr7 (2-38)||(33316516-33316552)
chr7 (4-36)||(33507164-33507196)
chr7 (2-42)||(36622065-36622105)
chr7 (3-39)||(43301952-43301988)
chr7 (3-39)||(44480799-44480835)
chr7 (2-38)||(44525128-44525164)
chr7 (3-39)||(48154026-48154062)
[»] scaffold0182 (1 HSPs)
scaffold0182 (3-45)||(18141-18183)
[»] chr6 (11 HSPs)
chr6 (2-44)||(26682674-26682716)
chr6 (3-36)||(767782-767815)
chr6 (3-40)||(1336529-1336566)
chr6 (1-38)||(4606026-4606063)
chr6 (2-39)||(7575672-7575709)
chr6 (4-37)||(14185713-14185746)
chr6 (4-37)||(21214549-21214582)
chr6 (1-34)||(31759145-31759178)
chr6 (2-39)||(33683998-33684035)
chr6 (2-39)||(33858740-33858777)
chr6 (2-38)||(33599460-33599496)
[»] scaffold0508 (1 HSPs)
scaffold0508 (3-36)||(6739-6772)
[»] scaffold0063 (1 HSPs)
scaffold0063 (2-39)||(52120-52157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-35)||(225133-225165)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-39)||(197274-197310)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 30888757 - 30888543
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaatttaatcaagggttcaagatagcttattgtcataacctttcatcaaatttagtggttgcag 100  Q
    ||||||||||||  ||| ||||||||||||||| ||||||||||||||| ||||| | | |||||||||||||||||||| |||||||||||||||||||    
T  30888757 tgtatatttatagagacaaaaaacatatttaacactaaatttaatcaagtgttcatgtttgcttattgtcataacctttcgtcaaatttagtggttgcag 30888658  T
Q  101 caaaattgacaataagatttatttcttgaaacagattaagattttgatctttcaatcccaaattttgaacagaaacatctcctgctatagctgtaacttt 200  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30888657 caaaattgacaataaggtctatttcttgaaacagattaagattttcatctttcaatcccaaattttgaacagaaacatctcctgctatagctgtaacttt 30888558  T
Q  201 ctttgatatgaaaga 215  Q
    |||||||||||||||    
T  30888557 ctttgatatgaaaga 30888543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 39025699 - 39025664
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||| |||||||||||||||||||||||||    
T  39025699 atatttataaggaccaaaaacatatttaaccctaaa 39025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 11113063 - 11113097
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  11113063 gtatatttataaggaccaaaaacatatttaaccct 11113097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 14692522 - 14692484
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  14692522 gtatatttatagggaccaaaaacatatttaaccctaaat 14692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 28137407 - 28137369
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  28137407 tatatttatagggaccaaaaacatatttaaccctaaatt 28137369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 7468432 - 7468395
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  7468432 gtatatttataaggaccaaaaacatatataaccctaaa 7468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9111390 - 9111357
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||| |||||||||||||||||||||||    
T  9111390 atatttataaagaccaaaaacatatttaacccta 9111357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 39731331 - 39731364
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  39731331 tatatttataaggaccaaaaacatatttaaccct 39731364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43446988 - 43446947
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||  |||||||||||||||||||||| ||||||||    
T  43446988 atatttatagggaccaaaaacatatttaacccttaatttaat 43446947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 1055921 - 1055885
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  1055921 atatttataaggaccaaaaacatatttaacccaaaat 1055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 4000972 - 4001008
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  4000972 tatatttatagggaccaaaaacatatttaaccctaaa 4001008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 12444706 - 12444742
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  12444706 gtatatttatagagaccaaaaacatatttaaccctaa 12444742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 26020308 - 26020344
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  26020308 tatatttatagggaccaaaaacatatttaaccctaaa 26020344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 26910485 - 26910449
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  26910485 tatatttatagggaccaaaaacatatttaaccctaaa 26910449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31703932 - 31703968
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaacccta 37  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  31703932 tgtatatttataaggactaaaaacatatttaacccta 31703968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 34448525 - 34448489
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  34448525 tatatttataaggactaaaaacatatttaaccctaaa 34448489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 34598181 - 34598149
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccc 35  Q
    ||||||||||| |||||||||||||||||||||    
T  34598181 tatatttataaggaccaaaaacatatttaaccc 34598149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40509511 - 40509471
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  40509511 tgtatatttatggagaccaaaaacatatttaaccctaaatt 40509471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 24973034 - 24973077
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  24973034 gtatatttataaggaccaaaaacatatttaaccctaaatttaat 24973077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 31880277 - 31880234
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  31880277 gtatatttataaggaccaaaaacatatttaacccaaaatttaat 31880234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 44734107 - 44734149
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  44734107 tatatttatagggaccaaaaacatatttaaccctaaatttaat 44734149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22888210 - 22888251
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  22888210 tgtatatttatagagaccaaaaacatatttaaccctaaattt 22888251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28868044 - 28868003
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  28868044 tgtatatttatagggaccaaaaacatatttaaccctaaattt 28868003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 39711514 - 39711559
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaatca 47  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||    
T  39711514 gtatatttatagggaccaaaaacatatttaaccctaaaattaatca 39711559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 47843911 - 47843871
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaattta 43  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  47843911 tatatttatagggaccaaaaacatatttaaccctaaattta 47843871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 20748491 - 20748448
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||  ||||||||||||||||||||||| |||||||    
T  20748491 gtatatttatagggaccaaaaacatatttaaccctatatttaat 20748448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 20754348 - 20754305
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||| ||||||||||||||||||||||  |||||||    
T  20754348 gtatatttataaggaccaaaaacatatttaaccctgtatttaat 20754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 3751380 - 3751338
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    |||||||||||  ||| ||||||||||||||||||||||||||    
T  3751380 gtatatttatagggactaaaaacatatttaaccctaaatttaa 3751338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 15369030 - 15368988
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    ||||||||||  ||||||||||||||||||||||| |||||||    
T  15369030 tatatttatagggaccaaaaacatatttaaccctagatttaat 15368988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 17935186 - 17935224
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  17935186 atatttatagggaccaaaaacatatttaaccctaaattt 17935224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 538523 - 538486
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  538523 gtatatttatagggaccaaaaacatatttaaccctaaa 538486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9839999 - 9839966
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||| |||||||||||||||||||||||    
T  9839999 atatttataaagaccaaaaacatatttaacccta 9839966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 10556067 - 10556104
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  10556067 gtatatttatagggaccaaaaacatatttaaccctaaa 10556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 17338001 - 17337968
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  17338001 tatatttataaggaccaaaaacatatttaaccct 17337968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 38163397 - 38163360
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  38163397 tatatttatagggaccaaaaacatatttaaccctaaat 38163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 41411480 - 41411439
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||  ||||||||||||||||||||||||| |||||    
T  41411480 atatttatagggaccaaaaacatatttaaccctaaaattaat 41411439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 41885093 - 41885056
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  41885093 gtatatttatagggaccaaaaacatatttaaccctaaa 41885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 2969716 - 2969680
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  2969716 tatatttatagggaccaaaaacatatttaaccctaaa 2969680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 3792940 - 3792904
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||  ||||||||||||||||||||||||||    
T  3792940 atatttatagggaccaaaaacatatttaaccctaaat 3792904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 4369246 - 4369214
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaacc 34  Q
    |||||||||||| ||||||||||||||||||||    
T  4369246 gtatatttataaagaccaaaaacatatttaacc 4369214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 10555631 - 10555599
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||| ||||||||||||||||||||||    
T  10555631 atatttataaggaccaaaaacatatttaaccct 10555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 14083045 - 14083013
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccc 35  Q
    ||||||||||| |||||||||||||||||||||    
T  14083045 tatatttataaagaccaaaaacatatttaaccc 14083013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 23529893 - 23529925
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||||||||||||| ||||||||||||    
T  23529893 atatttataacgaccaaaaatatatttaaccct 23529925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 34639119 - 34639155
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  34639119 gtatatttatagggaccaaaaacatatttaaccctaa 34639155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 39368064 - 39368028
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  39368064 gtatatttatagggaccaaaaacatatttaaccctaa 39368028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 46939242 - 46939202
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  |||||||||||||||||||||| |||||    
T  46939242 gtatatttatagggaccaaaaacatatttaacccttaattt 46939202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 49579978 - 49579938
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    |||||||||  ||||||||||||||||||||||| ||||||    
T  49579978 atatttatagggaccaaaaacatatttaaccctatatttaa 49579938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 19656583 - 19656510
Alignment:
Q  142 ttttgatctttcaatcccaaattttgaacagaaacatctcctgctatagctgtaactttctttgatatgaaaga 215  Q
    ||||||||||| | ||||||||||| ||||| ||||||||||||||| ||   ||| |||||||||||||||||    
T  19656583 ttttgatcttttattcccaaattttcaacagcaacatctcctgctattgccacaaccttctttgatatgaaaga 19656510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 27553049 - 27553009
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  27553049 gtatatttatagggaccaaaaacatatttaaccctaaattt 27553009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38992109 - 38992069
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  38992109 atatttatagggaccaaaaacatatttaaccctaaatttaa 38992069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 8080107 - 8080064
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||  ||||||||||||||||||||||||| |||||    
T  8080107 gtatatttatagggaccaaaaacatatttaaccctaaaattaat 8080064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 19873235 - 19873156
Alignment:
Q  136 ttaagattttgatctttcaatcccaaattttgaacagaaacatctcctgctatagctgtaactttctttgatatgaaaga 215  Q
    ||||| |||| |||||| | ||||||||||| || || ||||||||||||||| ||   ||| |||||||||||||||||    
T  19873235 ttaagcttttcatcttttattcccaaattttcaatagcaacatctcctgctattgccacaaccttctttgatatgaaaga 19873156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26918239 - 26918274
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26918239 tgtatatttataaggaccaaaaacatatttaaccct 26918274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 16946627 - 16946661
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaacccta 37  Q
    ||||||||||| |||||||||||||||||||||||    
T  16946627 tatatttataaagaccaaaaacatatttaacccta 16946661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 19689481 - 19689439
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    ||||||||||  ||||||||||||||||||||||||| |||||    
T  19689481 tatatttatagggaccaaaaacatatttaaccctaaaattaat 19689439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 28985393 - 28985427
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||| ||||||||||||||||||||||||    
T  28985393 atatttataaggaccaaaaacatatttaaccctaa 28985427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 51042275 - 51042237
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||||| || |||||||||||||||||||||||    
T  51042275 gtatatttataaagatcaaaaacatatttaaccctaaat 51042237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 22023711 - 22023748
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  22023711 gtatatttatagggaccaaaaacatatttaaccctaaa 22023748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 29097542 - 29097575
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccc 35  Q
    |||||||||||| |||||||||||||||||||||    
T  29097542 gtatatttataaggaccaaaaacatatttaaccc 29097575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 55172693 - 55172660
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||| |||||||||||||||||||||||    
T  55172693 atatttataaggaccaaaaacatatttaacccta 55172660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 1924526 - 1924562
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  1924526 gtatatttatagggaccaaaaacatatttaaccctaa 1924562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 6786447 - 6786483
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||  ||||||||||||||||||||||||||    
T  6786447 atatttatagggaccaaaaacatatttaaccctaaat 6786483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8168932 - 8168968
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8168932 tatatttatgaggaccaaaaacatatttaaccctaaa 8168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 24650419 - 24650451
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||| ||||||||||||||||||||||    
T  24650419 atatttataaggaccaaaaacatatttaaccct 24650451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 29772008 - 29772044
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  29772008 tatatttatagggaccaaaaacatatttaaccctaaa 29772044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 31143397 - 31143433
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  31143397 gtatatttatagggaccaaaaacatatttaaccctaa 31143433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 34101040 - 34101072
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccc 35  Q
    ||||||||||| |||||||||||||||||||||    
T  34101040 tatatttataaagaccaaaaacatatttaaccc 34101072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 43201546 - 43201578
Alignment:
Q  7 tttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||| |||||||||||||||||||||||||    
T  43201546 tttataaggaccaaaaacatatttaaccctaaa 43201578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 44917512 - 44917472
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||| ||||||||||||||||||||||||    
T  44917512 gtatatttatagggacaaaaaacatatttaaccctaaattt 44917472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 55244237 - 55244269
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaacc 34  Q
    |||||||||||| ||||||||||||||||||||    
T  55244237 gtatatttataaggaccaaaaacatatttaacc 55244269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 45434525 - 45434486
Alignment:
Q  6 atttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  45434525 atttataaggaccaaaaacatatttaaccctaaatttaat 45434486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35213412 - 35213374
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35213412 tgtatatttataaggaccaaaaacatatttaaccctaaa 35213374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 2828531 - 2828490
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  2828531 tatatttatagggaccaaaaacatatttaaccctaaatttaa 2828490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 10673417 - 10673453
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10673417 gtatatttataaggaccaaaaacatatttaaccctaa 10673453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 40713930 - 40713890
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  40713930 gtatatttatagggaccaaaaacatatttaaccctaaattt 40713890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11127073 - 11127038
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11127073 tgtatatttataaagaccaaaaacatatttaaccct 11127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 5096389 - 5096351
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  5096389 tatatttatagggaccaaaaacatatttaaccctaaatt 5096351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 9375770 - 9375732
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  9375770 atatttatagggaccaaaaacatatttaaccctaaattt 9375732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 23796925 - 23796967
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaatc 46  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  23796925 atatttataaggaccaaaaacatatttaaccctagttttaatc 23796967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1172808 - 1172771
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  1172808 tatatttatagggaccaaaaacatatttaaccctaaat 1172771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 2289032 - 2289069
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||| || |||||||||||||||||||||||    
T  2289032 tatatttataaggatcaaaaacatatttaaccctaaat 2289069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 22199659 - 22199626
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccc 35  Q
    |||||||||||| |||||||||||||||||||||    
T  22199659 gtatatttataaggaccaaaaacatatttaaccc 22199626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23247852 - 23247815
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  23247852 tgtatatttatagggaccaaaaacatatttaaccctaa 23247815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36683157 - 36683116
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  36683157 atatttataaggaccaaaaacttaattaaccctaaatttaat 36683116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 37120797 - 37120834
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  37120797 gtatatttatagggaccaaaaacatatttaaccctaaa 37120834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 38389897 - 38389934
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| || ||||||||||||||||||||||    
T  38389897 gtatatttataaggatcaaaaacatatttaaccctaaa 38389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 40714359 - 40714396
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  40714359 gtatatttatagggaccaaaaacatatttaaccctaaa 40714396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 11169775 - 11169735
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  |||||||||||||||||||||| |||||    
T  11169775 gtatatttatagggaccaaaaacatatttaacccttaattt 11169735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 27140997 - 27140957
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  27140997 gtatatttatagggaccaaaaacatatttaaccctatattt 27140957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 33292336 - 33292300
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  33292336 gtatatttataaagaccaaaaatatatttaaccctaa 33292300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 35034705 - 35034669
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  35034705 gtatatttatagagaccaaaaacatatttaaccctaa 35034669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 42641385 - 42641421
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  42641385 gtatatttatagggaccaaaaacatatttaaccctaa 42641421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 29134088 - 29134049
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29134088 tatatttataaggaccaaaaacatatttaaccctaaattt 29134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 6532077 - 6532036
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  6532077 atatttataaggaccaaaaacatatttaacccaaaatttaat 6532036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 6376743 - 6376778
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6376743 tatatttataaggaccaaaaacatatttaaccctaa 6376778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 27252001 - 27252040
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  27252001 tatatttatagggaccaaaaacatatttaaccctaaattt 27252040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 44537885 - 44537928
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||    
T  44537885 gtatatttataaggaccaacaacatatttaacccttaatttaat 44537928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 12611715 - 12611681
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  12611715 gtatatttataaggaccaaaaacatatttaaccct 12611681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 17420385 - 17420423
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  17420385 atatttatagggaccaaaaacatatttaaccctaaattt 17420423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 9437497 - 9437538
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  9437497 tatatttatagggaccaaaaacatatttaaccctaattttaa 9437538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 10590748 - 10590781
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  10590748 tatatttataaggaccaaaaacatatttaaccct 10590781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 16064943 - 16064980
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  16064943 gtatatttatagggaccaaaaacatatttaaccctaaa 16064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21108517 - 21108480
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  21108517 gtatatttatagggaccaaaaacatatttaaccctaaa 21108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 21971105 - 21971072
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccc 35  Q
    |||||||||||| |||||||||||||||||||||    
T  21971105 gtatatttataaagaccaaaaacatatttaaccc 21971072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 26648740 - 26648781
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||  ||||||||||||||||||||||| |||||||    
T  26648740 atatttatagggaccaaaaacatatttaaccctatatttaat 26648781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27277585 - 27277544
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||   ||||||||||||||||||||||||||||    
T  27277585 tgtatatttatggggaccaaaaacatatttaaccctaaattt 27277544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 27278017 - 27278054
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  27278017 gtatatttatagggaccaaaaacatatttaaccctaaa 27278054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 27306046 - 27306009
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  27306046 gtatatttatagggaccaaaaacatatttaaccctaaa 27306009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 30784564 - 30784601
Alignment:
Q  6 atttataacgaccaaaaacatatttaaccctaaattta 43  Q
    |||||||  |||||||||||||||||||||||||||||    
T  30784564 atttatagggaccaaaaacatatttaaccctaaattta 30784601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38305965 - 38306002
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||  |||||||||||||||||||||||||||    
T  38305965 atatttatagggaccaaaaacatatttaaccctaaatt 38306002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 39545353 - 39545312
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    |||||||||  ||||||||||||||||||||| |||||||||    
T  39545353 atatttatagggaccaaaaacatatttaacccaaaatttaat 39545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 40957539 - 40957502
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||  |||||||||||||||||||||||||||    
T  40957539 atatttatagggaccaaaaacatatttaaccctaaatt 40957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 41312373 - 41312410
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  41312373 gtatatttatagagaccaaaaacatatttaaccctaaa 41312410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 42185626 - 42185655
Alignment:
Q  15 gaccaaaaacatatttaaccctaaatttaa 44  Q
    ||||||||||||||||||||||||||||||    
T  42185626 gaccaaaaacatatttaaccctaaatttaa 42185655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45070311 - 45070274
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  45070311 gtatatttatagggaccaaaaacatatttaaccctaaa 45070274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 8811092 - 8811056
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  8811092 tatatttataaagacaaaaaacatatttaaccctaaa 8811056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 12851746 - 12851782
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaat 40  Q
    |||||||||  ||||||||||||||||||||||||||    
T  12851746 atatttatagggaccaaaaacatatttaaccctaaat 12851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 27306457 - 27306497
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  27306457 gtatatttatagggaccaaaaacatatttaaccctatattt 27306497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 33809880 - 33809844
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  33809880 tatatttatagggaccaaaaacatatttaaccctaaa 33809844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 40019848 - 40019884
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  40019848 gtatatttatagggaccaaaaacatatttaaccctaa 40019884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 160572 - 160535
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| |||||||||||||||||||||||||    
T  160572 gtatatttataaggaccaaaaacatatttaaccctaaa 160535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34330803 - 34330762
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  34330803 tgtatatttataaggaacaaaaacatatttaaccctaaattt 34330762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 43081601 - 43081638
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| |||||||||||||||||||||||||    
T  43081601 gtatatttataaggaccaaaaacatatttaaccctaaa 43081638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 8398931 - 8398896
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||| |||||||||||||||||||||||||    
T  8398931 atatttataaggaccaaaaacatatttaaccctaaa 8398896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 23550685 - 23550646
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  23550685 gtatatttatagggaccaaaaacatatttaaccctaaatt 23550646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 31401685 - 31401724
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  31401685 tatatttatagagaccaaaaacatatttaaccctaaattt 31401724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 42880113 - 42880152
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  42880113 gtatatttataaggaccaaaaacatatttaacccaaaatt 42880152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 3135802 - 3135768
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  3135802 gtatatttataaggaccaaaaacatatttaaccct 3135768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 7923256 - 7923294
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  7923256 tatatttataaggatcaaaaacatatttaaccctaaatt 7923294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 14745553 - 14745515
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  14745553 gtatatttataacaaccaaaaacatatttaacccaaaat 14745515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 16129040 - 16129006
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| |||||||||||||||||||||||    
T  16129040 gtatatttatagcgaccaaaaacatatttaaccct 16129006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31311358 - 31311396
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  31311358 tgtatatttatagggaccaaaaacatatttaaccctaaa 31311396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 43862561 - 43862527
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  43862561 gtatatttataaggaccaaaaacatatttaaccct 43862527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 54851396 - 54851358
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  54851396 tgtatatttatgaggaccaaaaacatatttaaccctaaa 54851358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 25396746 - 25396779
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||| |||||||||||||||||||||||    
T  25396746 atatttataaggaccaaaaacatatttaacccta 25396779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 40853184 - 40853221
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  40853184 gtatatttataaggaccaaaaatatatttaaccctaaa 40853221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42629243 - 42629280
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  42629243 tgtatatttatgaggaccaaaaacatatttaaccctaa 42629280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 47742759 - 47742722
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||| || ||||||||||||||||||||||    
T  47742759 gtatatttataaagatcaaaaacatatttaaccctaaa 47742722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 52083046 - 52083079
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||| |||||||||||||||||||||||    
T  52083046 tatatttatagcgaccaaaaacatatttaaccct 52083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 3136203 - 3136239
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  3136203 gtatatttatagggaccaaaaacatatttaaccctaa 3136239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16012929 - 16012893
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  16012929 tatatttatagggaccaaaaacatatttaaccctaaa 16012893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23804026 - 23804066
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  23804026 tgtatatttatagggaccaaaaacatatttaacactaaatt 23804066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 43630685 - 43630721
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  43630685 tatatttatagggaccaaaaacatatttaaccctaaa 43630721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 51949460 - 51949416
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaatc 46  Q
    |||||||||||  ||||||||||||||||||||| ||||| ||||    
T  51949460 gtatatttatagggaccaaaaacatatttaacccaaaattaaatc 51949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 53594795 - 53594831
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  53594795 gtatatttatagggaccaaaaacatatttaaccctaa 53594831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 36356 - 36320
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36356 gtatatttataaggaccaaaaacatatttaaccctaa 36320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 41014017 - 41014053
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| |||||||||||||||||||||||||    
T  41014017 tatatttataaggaccaaaaacatatttaaccctaaa 41014053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 48154496 - 48154536
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  48154496 gtatatttatagggaccaaaaacatatttaaccctaaattt 48154536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 1694425 - 1694390
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||||| |||||||||||||||||||||||    
T  1694425 gtatatttataaggaccaaaaacatatttaacccta 1694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24463708 - 24463747
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  24463708 tgtatatttataaggatcaaaaacatatttaaccctaaat 24463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 43542709 - 43542670
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  43542709 gtatatttataaggaccaaaaacatatttaacccaaaatt 43542670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 584890 - 584852
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  584890 tatatttataaggaccaaaaacatatttaacccaaaatt 584852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 2007223 - 2007261
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  2007223 tatatttatagggaccaaaaacatatttaaccctaaatt 2007261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18564308 - 18564270
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  18564308 tgtatatttataaggatcaaaaacatatttaaccctaaa 18564270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 21751996 - 21752038
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    ||||||||||  |||||||||||||||||||||| ||||||||    
T  21751996 tatatttatagggaccaaaaacatatttaacccttaatttaat 21752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30256085 - 30256122
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  30256085 tgtatatttatagggaccaaaaacatatttaaccctaa 30256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 32860684 - 32860721
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  32860684 gtatatttatagggaccaaaaacatatttaaccctaaa 32860721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 43185068 - 43185027
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattta 43  Q
    |||||||||||| |||||||||||||||||||| || |||||    
T  43185068 gtatatttataaggaccaaaaacatatttaaccatatattta 43185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 46613382 - 46613349
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccc 35  Q
    |||||||||||| |||||||||||||||||||||    
T  46613382 gtatatttataaggaccaaaaacatatttaaccc 46613349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1599086 - 1599046
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaaatt 41  Q
    ||||||||||||| ||| ||||||||||||||||| |||||    
T  1599086 tgtatatttataaggacaaaaaacatatttaacccaaaatt 1599046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 11290582 - 11290622
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  11290582 atatttatagggaccaaaaacatatttaaccctaaaattaa 11290622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 11887520 - 11887484
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  11887520 gtatatttatagcgactaaaaacatatttaaccctaa 11887484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 15076575 - 15076607
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccc 35  Q
    ||||||||||| |||||||||||||||||||||    
T  15076575 tatatttataaggaccaaaaacatatttaaccc 15076607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24406950 - 24406986
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaacccta 37  Q
    ||||||||||||  |||||||||||||||||||||||    
T  24406950 tgtatatttatagggaccaaaaacatatttaacccta 24406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 25968101 - 25968069
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||| ||||||||||||||||||||||    
T  25968101 atatttataaggaccaaaaacatatttaaccct 25968069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 33316516 - 33316552
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  33316516 gtatatttatagggaccaaaaacatatttaaccctaa 33316552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 33507196 - 33507164
Alignment:
Q  4 atatttataacgaccaaaaacatatttaaccct 36  Q
    |||||||||| ||||||||||||||||||||||    
T  33507196 atatttataaggaccaaaaacatatttaaccct 33507164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 36622065 - 36622105
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaattt 42  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  36622065 gtatatttatagggaccaaaaacatatttaaccctatattt 36622105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 43301952 - 43301988
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  43301952 tatatttatagggaccaaaaacatatttaaccctaaa 43301988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44480835 - 44480799
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  44480835 tatatttataaggaccaaaaacatatttaaccttaaa 44480799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 44525164 - 44525128
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  44525164 gtatatttataaggactaaaaacatatttaaccctaa 44525128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 48154062 - 48154026
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||  |||||||||||||||||||||||||    
T  48154062 tatatttatagggaccaaaaacatatttaaccctaaa 48154026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 18141 - 18183
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaatttaat 45  Q
    ||||||||||  |||||||||||||||||||||| ||||||||    
T  18141 tatatttatagggaccaaaaacatatttaacccttaatttaat 18183  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26682716 - 26682674
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaatttaa 44  Q
    |||||||||||  |||||||||||||||||||||||| |||||    
T  26682716 gtatatttatagggaccaaaaacatatttaaccctaattttaa 26682674  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 767815 - 767782
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  767815 tatatttataaggaccaaaaacatatttaaccct 767782  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1336566 - 1336529
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaat 40  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  1336566 tatatttatagggaccaaaaacatatttaaccctaaat 1336529  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4606026 - 4606063
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  4606026 tgtatatttatagggaccaaaaacatatttaaccctaa 4606063  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 7575709 - 7575672
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  7575709 gtatatttatagggaccaaaaacatatttaaccctaaa 7575672  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 14185746 - 14185713
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||| |||||||||||||||||||||||    
T  14185746 atatttataaggaccaaaaacatatttaacccta 14185713  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 21214582 - 21214549
Alignment:
Q  4 atatttataacgaccaaaaacatatttaacccta 37  Q
    |||||||||||||||||||| |||||||||||||    
T  21214582 atatttataacgaccaaaaatatatttaacccta 21214549  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31759178 - 31759145
Alignment:
Q  1 tgtatatttataacgaccaaaaacatatttaacc 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  31759178 tgtatatttataaagaccaaaaacatatttaacc 31759145  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 33684035 - 33683998
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  33684035 gtatatttatagggaccaaaaacatatttaaccctaaa 33683998  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 33858740 - 33858777
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  33858740 gtatatttatagggaccaaaaacatatttaaccctaaa 33858777  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 33599496 - 33599460
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaa 38  Q
    |||||||||||  ||||||||||||||||||||||||    
T  33599496 gtatatttatagggaccaaaaacatatttaaccctaa 33599460  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 6739 - 6772
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccct 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  6739 tatatttataaggaccaaaaacatatttaaccct 6772  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 52120 - 52157
Alignment:
Q  2 gtatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    |||||||||||  |||||||||||||||||||||||||    
T  52120 gtatatttatagggaccaaaaacatatttaaccctaaa 52157  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 225133 - 225165
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccc 35  Q
    ||||||||||| |||||||||||||||||||||    
T  225133 tatatttataaggaccaaaaacatatttaaccc 225165  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 197310 - 197274
Alignment:
Q  3 tatatttataacgaccaaaaacatatttaaccctaaa 39  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  197310 tatatttataaagaccaaaaacatatttaactctaaa 197274  T

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