View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12299_high_9 (Length: 327)
Name: NF12299_high_9
Description: NF12299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12299_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-175
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 388322 - 388005
Alignment:
| Q |
1 |
gacttcacctcgatgcagccgagccttgggcagttgatttcggtgtaacgaaatcggaggtggcaattgatttagagtcagttgcaacacatgagattgg |
100 |
Q |
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| T |
388322 |
gacttcacctcgatgcagccgagacttgggcagttgatttcggtgtaacgaaatcggaggtggcaattgatttagagtcagttgcaacacatgagattgg |
388223 |
T |
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| Q |
101 |
acatttgttgggtttgtcacatagttctttgaaagaggcagtaatgtatccaagtttaaggccaagagataaaagagctgatttgaatattgatgatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
388222 |
acatttgttgggtttgtcacatagttctttgaaagaggcagtaatgtatccaagtttaaggccaagagataaaagagctgatttgaatattgatgatatt |
388123 |
T |
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| Q |
201 |
aaaggtgtacaatctctttatggttctaatcctaattttagatctcagtggtcatcattggaatctgatatctccacaaatcatggtgcaaaatttggag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
388122 |
aaaggtgtacaatctctttatggttctaatcctaattttagatctcagtggtcatcattggaatctgatatctccacaaatcatggtgcaaaatttggag |
388023 |
T |
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| Q |
301 |
ttgacactcacaggttct |
318 |
Q |
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|||||||| ||||||||| |
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| T |
388022 |
ttgacacttacaggttct |
388005 |
T |
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