View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12299_low_15 (Length: 298)
Name: NF12299_low_15
Description: NF12299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12299_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 292
Target Start/End: Complemental strand, 2222759 - 2222485
Alignment:
| Q |
18 |
ctaacaaccactgaaaaccttgtactcaaacttatgtcttcaaaacaacatgaacagaatcaaaacaacctcgtactcaaactaatgtcttcaaaacaac |
117 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2222759 |
ctaacaaccactgaaaacctcgtactcaaacttatgtcttcaaaacaacatgaacagaatcaaaacaacctcgtactcaaactaatgtcttcaaaacaac |
2222660 |
T |
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| Q |
118 |
atcagcgtaatcaaaacaacctcgtatcaaacaaaaacgaccaagaagaagaaacacgaccaatatcaatgttaacaccacgaaaaacctcgtactcaag |
217 |
Q |
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|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2222659 |
atcagcgtaaccaaaacaacctcgtatcaaataaaaacgaccaagaagaagaaacacgaccaatatcaatgttaacaccacgaaaaacctcctactcaag |
2222560 |
T |
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| Q |
218 |
ctcagaggaatctatagctactgtcacttcatcatcatcaacaagaacaacaccaccacagcttcacaggttctg |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
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| T |
2222559 |
ctcagaggaatctatagctactgtcacttcatcatcatcaacaagaacaacaccaccacagcttcaaagtttctg |
2222485 |
T |
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