View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12299_low_5 (Length: 433)
Name: NF12299_low_5
Description: NF12299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12299_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 26936063 - 26936476
Alignment:
| Q |
1 |
atatattaagctgagttcaaaagggttgttattgtttgatacaaaatacaagaaaattgcacaaattccatctcaaagtattcaaccactaaaattttta |
100 |
Q |
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| T |
26936063 |
atatattaagctgagttcaaaagggttgttattgtttgatacaaaatacaagaaaattgcacaaattccatctcaaagtattcaacctctaaaattttta |
26936162 |
T |
|
| Q |
101 |
gcattgaagaatgaaacaggaaattttggtctttattactattcacaagagaaaggaaaatttgaggcttcttttcaagcacttaacaacacatgtgatc |
200 |
Q |
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| T |
26936163 |
gcactgaagaatgaaacaggaaattttggtctttattactattcacaagagaaaggaaaatttgaggcttcatttcaagcacttaacaacacatgtgatc |
26936262 |
T |
|
| Q |
201 |
ttccaaattcttgtagaccttatggtatatgtacattttccaatacctgttcgtgtattcagattttgacaaatgacgaaaagagtagtgcggattgtag |
300 |
Q |
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| T |
26936263 |
ttccaaattcttgtagaccttatggtatatgtacattttccaatacctgttcgtgtattcagattttgacaaatgatgaaaagagtagtgcggattgtag |
26936362 |
T |
|
| Q |
301 |
tgaaggattttccggtggtttttgcaacggcaaaaaggcggaaatgttgaaaattgataatgtaggtagtgtgctcaaaggtgttcctgaaattgttaat |
400 |
Q |
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| T |
26936363 |
tgaaggattttccggtggtttttgcaacggcaaaaaggcggaaatgttgaaaattgataatgtaggtagtgtgctcaaaggtgttcctgaaattgttaat |
26936462 |
T |
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| Q |
401 |
attagccgagaagc |
414 |
Q |
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| T |
26936463 |
attagccgagaagc |
26936476 |
T |
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