View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12305_high_30 (Length: 244)
Name: NF12305_high_30
Description: NF12305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12305_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 232
Target Start/End: Original strand, 10739663 - 10739873
Alignment:
| Q |
21 |
ataccatcatagaagtactataaatacatgcaataccttcattctcaagtaatcaataataatattgattctagcttctacattttatctccttttctct |
120 |
Q |
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| T |
10739663 |
ataccatcatagaagtactataaatacatgcaataccttcattctcaagtaatcaataataatattgattctagcttctacattttatctccttttctct |
10739762 |
T |
|
| Q |
121 |
tattttccataattttctatcactttttagtttatcaacatggcatcatgagcctcttgatctaagagtgcttcttccgcacattttctttcgttttcct |
220 |
Q |
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|||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10739763 |
tattttccataattttctatcaatttttagcttatcaacatggcatcatgagcatcttgatctaagagtgcttcttccgcacattttcttt-gttttcct |
10739861 |
T |
|
| Q |
221 |
ttcctttctctg |
232 |
Q |
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|||||||||||| |
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| T |
10739862 |
ttcctttctctg |
10739873 |
T |
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