View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12305_high_31 (Length: 244)
Name: NF12305_high_31
Description: NF12305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12305_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 30702176 - 30702389
Alignment:
| Q |
12 |
agagaattcaaagcagtgcacaaagtgtttggtgttagcaacataacaaagtttgtaaggaatgctcaagagggagatagaagaaaagttgtggattcat |
111 |
Q |
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| T |
30702176 |
agagaattcaaagcagtgcacaaagtgtttggtgttagcaacataacaaagtttgtaaggaatgctcaagagggagatagaagaaaagttgtggattcat |
30702275 |
T |
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| Q |
112 |
tgatatgggaagcactttctaggcaaaaggatccaataaatggttcttatggagagtatacaaaagtttacaatgagtataaaagattatttgatgaact |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30702276 |
tgatatgggaagcactttctaggcaaaaggatccaataaatggttcttatggagagtatacaaaagtttacaatgagtataaaagattatttgatgaact |
30702375 |
T |
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| Q |
212 |
taagatgtttagag |
225 |
Q |
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|||||||||||||| |
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| T |
30702376 |
taagatgtttagag |
30702389 |
T |
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