View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12305_high_6 (Length: 502)

Name: NF12305_high_6
Description: NF12305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12305_high_6
NF12305_high_6
[»] chr6 (49 HSPs)
chr6 (152-492)||(33041473-33041798)
chr6 (199-388)||(33235996-33236192)
chr6 (152-387)||(9719034-9719271)
chr6 (151-388)||(30487308-30487547)
chr6 (148-385)||(19278039-19278282)
chr6 (200-393)||(1390365-1390566)
chr6 (152-388)||(9721140-9721378)
chr6 (214-387)||(5585304-5585486)
chr6 (152-388)||(14515476-14515713)
chr6 (151-343)||(4097559-4097755)
chr6 (273-388)||(10818343-10818458)
chr6 (216-393)||(34176397-34176581)
chr6 (151-345)||(21606889-21607086)
chr6 (151-341)||(31849112-31849305)
chr6 (189-388)||(1300654-1300862)
chr6 (211-338)||(10348850-10348986)
chr6 (189-388)||(16737998-16738205)
chr6 (194-266)||(2893670-2893742)
chr6 (200-344)||(2892650-2892801)
chr6 (152-266)||(12811112-12811221)
chr6 (212-317)||(13583777-13583890)
chr6 (274-345)||(2900038-2900109)
chr6 (195-266)||(6034204-6034275)
chr6 (192-387)||(26318343-26318546)
chr6 (18-88)||(33040669-33040739)
chr6 (191-388)||(665843-666054)
chr6 (210-344)||(1395691-1395834)
chr6 (152-226)||(9721141-9721210)
chr6 (319-388)||(10818231-10818300)
chr6 (175-248)||(9298636-9298709)
chr6 (152-241)||(10818232-10818316)
chr6 (286-345)||(9298625-9298685)
chr6 (319-387)||(19278211-19278278)
chr6 (152-344)||(30849960-30850153)
chr6 (191-343)||(2892890-2893053)
chr6 (211-266)||(14548738-14548793)
chr6 (291-341)||(7775996-7776046)
chr6 (152-226)||(9719034-9719103)
chr6 (319-388)||(14515475-14515544)
chr6 (223-305)||(25741476-25741566)
chr6 (189-231)||(1300787-1300829)
chr6 (188-226)||(10818388-10818426)
chr6 (317-382)||(23091129-23091195)
chr6 (296-345)||(31799070-31799120)
chr6 (322-387)||(21607020-21607085)
chr6 (319-387)||(4097686-4097754)
chr6 (189-225)||(21606879-21606915)
chr6 (348-388)||(23090997-23091037)
chr6 (152-192)||(23090998-23091038)
[»] chr3 (54 HSPs)
chr3 (152-393)||(41110318-41110562)
chr3 (188-388)||(24560251-24560459)
chr3 (183-369)||(25654991-25655187)
chr3 (151-393)||(18654597-18654843)
chr3 (183-345)||(220442-220612)
chr3 (205-370)||(52473966-52474139)
chr3 (196-345)||(30200133-30200293)
chr3 (189-345)||(37102194-37102358)
chr3 (155-345)||(21773788-21773981)
chr3 (195-393)||(41039947-41040153)
chr3 (189-371)||(46556178-46556369)
chr3 (188-384)||(27541937-27542141)
chr3 (185-339)||(9312522-9312687)
chr3 (229-388)||(36568906-36569072)
chr3 (228-388)||(16275707-16275875)
chr3 (188-333)||(2387817-2387970)
chr3 (285-387)||(28581189-28581291)
chr3 (205-386)||(37807131-37807321)
chr3 (194-264)||(651771-651841)
chr3 (211-386)||(10748299-10748484)
chr3 (199-266)||(46204931-46204998)
chr3 (200-266)||(14898022-14898088)
chr3 (188-266)||(28582641-28582719)
chr3 (195-327)||(43005804-43005942)
chr3 (152-266)||(6803333-6803442)
chr3 (199-339)||(52185060-52185207)
chr3 (206-339)||(55327422-55327563)
chr3 (199-266)||(54574493-54574560)
chr3 (168-387)||(40463874-40464096)
chr3 (319-388)||(34641163-34641232)
chr3 (155-260)||(10943752-10943852)
chr3 (296-387)||(17474209-17474301)
chr3 (319-394)||(24253895-24253970)
chr3 (301-393)||(26135952-26136044)
chr3 (230-266)||(31684362-31684398)
chr3 (322-385)||(14897981-14898044)
chr3 (319-393)||(220570-220644)
chr3 (296-386)||(17474356-17474446)
chr3 (319-369)||(28582682-28582732)
chr3 (319-388)||(41110494-41110563)
chr3 (153-260)||(12790377-12790478)
chr3 (230-266)||(31894020-31894056)
chr3 (194-266)||(37236963-37237034)
chr3 (301-388)||(13082856-13082943)
chr3 (319-386)||(55428552-55428619)
chr3 (306-388)||(23028086-23028168)
chr3 (322-387)||(6803377-6803442)
chr3 (319-384)||(21773788-21773853)
chr3 (319-388)||(24560219-24560288)
chr3 (189-226)||(30200123-30200160)
chr3 (189-226)||(37102184-37102221)
chr3 (188-225)||(52474088-52474125)
chr3 (319-367)||(30200264-30200312)
chr3 (152-192)||(42772047-42772087)
[»] chr2 (52 HSPs)
chr2 (152-388)||(36347543-36347782)
chr2 (189-388)||(23748130-23748337)
chr2 (154-390)||(8426879-8427110)
chr2 (188-351)||(15224733-15224904)
chr2 (152-388)||(36046206-36046442)
chr2 (200-345)||(39732774-39732926)
chr2 (189-388)||(19566822-19567030)
chr2 (189-345)||(39821704-39821868)
chr2 (211-347)||(16565832-16565978)
chr2 (149-366)||(36566874-36567096)
chr2 (211-388)||(40022427-40022615)
chr2 (185-384)||(12541796-12541999)
chr2 (274-388)||(34209592-34209706)
chr2 (199-333)||(28262500-28262642)
chr2 (185-387)||(31795772-31795982)
chr2 (199-345)||(7681293-7681443)
chr2 (274-388)||(9631688-9631802)
chr2 (200-351)||(29525768-29525931)
chr2 (274-345)||(27926681-27926752)
chr2 (152-262)||(35736178-35736283)
chr2 (152-339)||(9426988-9427179)
chr2 (274-345)||(42316809-42316880)
chr2 (239-328)||(17379897-17379994)
chr2 (291-341)||(1583222-1583272)
chr2 (215-306)||(2241471-2241570)
chr2 (205-334)||(37739949-37740085)
chr2 (211-260)||(9591973-9592022)
chr2 (319-388)||(36347714-36347783)
chr2 (296-388)||(35736337-35736429)
chr2 (297-388)||(887261-887351)
chr2 (194-265)||(41841722-41841793)
chr2 (296-394)||(45257456-45257555)
chr2 (200-266)||(6721754-6721820)
chr2 (322-390)||(9426985-9427053)
chr2 (320-388)||(15224868-15224936)
chr2 (312-388)||(17380007-17380083)
chr2 (321-388)||(34187577-34187644)
chr2 (188-266)||(41778807-41778885)
chr2 (319-396)||(39732901-39732978)
chr2 (199-255)||(27926613-27926669)
chr2 (326-385)||(8427051-8427110)
chr2 (319-394)||(22356177-22356252)
chr2 (321-388)||(31061361-31061428)
chr2 (319-393)||(35736172-35736246)
chr2 (152-226)||(36046207-36046276)
chr2 (194-333)||(39354231-39354378)
chr2 (194-266)||(886958-887028)
chr2 (211-260)||(2381125-2381174)
chr2 (295-388)||(16713494-16713587)
chr2 (227-264)||(32503232-32503269)
chr2 (319-388)||(36046375-36046443)
chr2 (322-394)||(41841678-41841750)
[»] chr4 (53 HSPs)
chr4 (152-388)||(54935070-54935311)
chr4 (195-388)||(27735786-27735987)
chr4 (211-388)||(45741947-45742132)
chr4 (152-371)||(31348340-31348562)
chr4 (151-393)||(5730827-5731073)
chr4 (152-394)||(37711141-37711371)
chr4 (194-388)||(54320474-54320676)
chr4 (198-388)||(49735470-49735668)
chr4 (206-388)||(41174397-41174587)
chr4 (206-382)||(35248738-35248922)
chr4 (152-327)||(26166940-26167118)
chr4 (152-364)||(1968377-1968600)
chr4 (151-345)||(46007744-46007943)
chr4 (206-388)||(24565348-24565536)
chr4 (199-376)||(6891405-6891590)
chr4 (215-344)||(36151637-36151773)
chr4 (188-345)||(47433754-47433919)
chr4 (293-388)||(6938394-6938489)
chr4 (225-333)||(16400871-16400987)
chr4 (188-382)||(17938115-17938318)
chr4 (152-339)||(29798291-29798478)
chr4 (274-345)||(34110933-34111003)
chr4 (200-345)||(44784038-44784190)
chr4 (152-370)||(21694910-21695129)
chr4 (224-369)||(22659268-22659413)
chr4 (152-339)||(2247854-2248042)
chr4 (319-388)||(31348494-31348563)
chr4 (198-370)||(45132517-45132695)
chr4 (200-345)||(28332850-28333003)
chr4 (152-260)||(56135752-56135855)
chr4 (211-266)||(2917095-2917150)
chr4 (271-345)||(36278376-36278450)
chr4 (319-388)||(1968532-1968601)
chr4 (319-386)||(27735749-27735816)
chr4 (324-387)||(46007879-46007942)
chr4 (317-395)||(2247972-2248050)
chr4 (152-226)||(54935241-54935310)
chr4 (186-385)||(55510202-55510407)
chr4 (319-388)||(45132668-45132737)
chr4 (302-343)||(45911327-45911368)
chr4 (319-388)||(54576329-54576398)
chr4 (321-388)||(54935069-54935137)
chr4 (205-265)||(31719966-31720028)
chr4 (194-240)||(2247843-2247889)
chr4 (195-233)||(6938322-6938360)
chr4 (196-242)||(27735901-27735947)
chr4 (322-388)||(47433885-47433951)
chr4 (323-393)||(47846233-47846303)
chr4 (152-226)||(49735471-49735540)
chr4 (206-266)||(22921033-22921094)
chr4 (206-266)||(22970705-22970766)
chr4 (211-260)||(34995108-34995157)
chr4 (300-388)||(37761467-37761555)
[»] chr1 (52 HSPs)
chr1 (189-386)||(8529834-8530039)
chr1 (196-388)||(40094935-40095136)
chr1 (152-388)||(30010335-30010574)
chr1 (152-393)||(12234013-12234257)
chr1 (151-393)||(38509891-38510136)
chr1 (152-393)||(41498407-41498652)
chr1 (156-388)||(2858934-2859169)
chr1 (152-342)||(32951366-32951559)
chr1 (152-388)||(35349468-35349703)
chr1 (189-338)||(50744332-50744490)
chr1 (153-344)||(51597672-51597866)
chr1 (194-345)||(10391912-10392072)
chr1 (195-345)||(49946633-49946791)
chr1 (190-345)||(6563614-6563775)
chr1 (199-336)||(45585739-45585884)
chr1 (274-393)||(43551993-43552108)
chr1 (152-247)||(26324017-26324112)
chr1 (274-387)||(20576136-20576247)
chr1 (274-387)||(7444623-7444736)
chr1 (205-359)||(26940874-26941036)
chr1 (231-345)||(36285619-36285741)
chr1 (275-394)||(28770852-28770969)
chr1 (319-394)||(32951491-32951566)
chr1 (274-345)||(40964726-40964798)
chr1 (206-266)||(44211037-44211097)
chr1 (189-266)||(2470867-2470944)
chr1 (238-345)||(41676363-41676480)
chr1 (200-260)||(43553068-43553129)
chr1 (319-383)||(2859105-2859169)
chr1 (326-393)||(23536777-23536844)
chr1 (319-393)||(35349635-35349709)
chr1 (319-388)||(30010334-30010403)
chr1 (323-388)||(41498406-41498471)
chr1 (301-393)||(2470727-2470819)
chr1 (296-388)||(2506689-2506781)
chr1 (194-242)||(41676437-41676485)
chr1 (323-386)||(35512974-35513037)
chr1 (319-369)||(10391893-10391943)
chr1 (319-401)||(12233999-12234081)
chr1 (152-226)||(12234182-12234251)
chr1 (188-226)||(38509928-38509966)
chr1 (211-260)||(1085628-1085677)
chr1 (339-388)||(20607410-20607459)
chr1 (319-392)||(25268437-25268510)
chr1 (291-388)||(40709294-40709391)
chr1 (195-248)||(49946629-49946682)
chr1 (319-387)||(7444481-7444549)
chr1 (194-226)||(35349504-35349536)
chr1 (319-387)||(38510067-38510135)
chr1 (194-226)||(40094973-40095005)
chr1 (195-223)||(43552037-43552065)
chr1 (190-266)||(49832583-49832659)
[»] chr5 (59 HSPs)
chr5 (152-388)||(13634714-13634953)
chr5 (179-393)||(7544161-7544383)
chr5 (188-393)||(10650463-10650661)
chr5 (183-388)||(26414922-26415136)
chr5 (152-388)||(16938482-16938721)
chr5 (216-388)||(8502837-8503017)
chr5 (189-385)||(36363067-36363271)
chr5 (195-388)||(28279478-28279680)
chr5 (189-338)||(9856915-9857072)
chr5 (188-388)||(37606929-37607136)
chr5 (194-345)||(4373611-4373770)
chr5 (195-393)||(10476067-10476275)
chr5 (200-387)||(9798615-9798810)
chr5 (154-345)||(36392195-36392388)
chr5 (200-345)||(10072692-10072845)
chr5 (188-388)||(37779139-37779345)
chr5 (288-388)||(1657955-1658055)
chr5 (274-388)||(14245090-14245204)
chr5 (199-388)||(37551453-37551647)
chr5 (199-388)||(37654283-37654477)
chr5 (185-339)||(20146917-20147088)
chr5 (152-344)||(16501836-16502033)
chr5 (153-345)||(2550397-2550592)
chr5 (211-266)||(22022907-22022962)
chr5 (274-344)||(20513491-20513561)
chr5 (274-345)||(43535-43607)
chr5 (194-264)||(11756917-11756987)
chr5 (229-344)||(17024270-17024393)
chr5 (274-345)||(22023495-22023568)
chr5 (274-345)||(32727822-32727893)
chr5 (211-311)||(42681510-42681618)
chr5 (302-388)||(14245202-14245288)
chr5 (199-256)||(11419303-11419360)
chr5 (205-266)||(14681520-14681581)
chr5 (152-266)||(40815300-40815408)
chr5 (313-387)||(11757070-11757144)
chr5 (200-266)||(39966084-39966150)
chr5 (319-388)||(13634713-13634782)
chr5 (285-345)||(17780279-17780340)
chr5 (319-388)||(26414895-26414964)
chr5 (271-339)||(4423336-4423404)
chr5 (302-390)||(10650427-10650517)
chr5 (321-388)||(34980812-34980879)
chr5 (152-242)||(1657969-1658054)
chr5 (152-226)||(14245218-14245287)
chr5 (280-345)||(11419237-11419302)
chr5 (297-345)||(2556167-2556215)
chr5 (152-260)||(34980813-34980916)
chr5 (188-258)||(43410-43481)
chr5 (327-386)||(2550533-2550592)
chr5 (190-266)||(14684614-14684692)
chr5 (274-345)||(29002251-29002322)
chr5 (152-190)||(8551621-8551659)
chr5 (326-388)||(10476028-10476090)
chr5 (150-192)||(12600703-12600745)
chr5 (323-393)||(33744190-33744260)
chr5 (322-388)||(40815299-40815365)
chr5 (319-388)||(16938481-16938550)
chr5 (184-264)||(13298296-13298376)
[»] chr8 (50 HSPs)
chr8 (188-384)||(31543078-31543282)
chr8 (183-382)||(11575415-11575621)
chr8 (194-387)||(16652989-16653190)
chr8 (189-388)||(11785561-11785768)
chr8 (195-344)||(1281184-1281341)
chr8 (168-388)||(31738442-31738665)
chr8 (179-345)||(1026894-1027067)
chr8 (185-345)||(7502999-7503167)
chr8 (152-386)||(30479721-30479958)
chr8 (199-394)||(3726859-3727054)
chr8 (191-345)||(29358385-29358547)
chr8 (200-351)||(30664407-30664566)
chr8 (188-346)||(7979174-7979340)
chr8 (280-388)||(34634277-34634385)
chr8 (188-384)||(36308876-36309081)
chr8 (211-339)||(6315119-6315255)
chr8 (196-345)||(37923123-37923280)
chr8 (192-387)||(11033455-11033659)
chr8 (152-339)||(9718530-9718720)
chr8 (194-328)||(37032419-37032561)
chr8 (152-360)||(2248455-2248666)
chr8 (195-388)||(41103506-41103709)
chr8 (204-338)||(28083792-28083934)
chr8 (274-387)||(29690925-29691038)
chr8 (199-388)||(40990183-40990383)
chr8 (194-266)||(42650468-42650540)
chr8 (152-345)||(4247563-4247761)
chr8 (319-388)||(43732860-43732929)
chr8 (283-370)||(10028259-10028347)
chr8 (194-306)||(33922560-33922680)
chr8 (200-266)||(10028156-10028222)
chr8 (205-344)||(13405027-13405178)
chr8 (323-397)||(9718656-9718730)
chr8 (319-384)||(1281149-1281214)
chr8 (319-387)||(16024327-16024394)
chr8 (323-393)||(31543249-31543319)
chr8 (283-317)||(35694828-35694862)
chr8 (211-260)||(12022281-12022330)
chr8 (320-388)||(2248454-2248522)
chr8 (321-388)||(8815316-8815383)
chr8 (273-388)||(24243052-24243164)
chr8 (188-226)||(3726897-3726935)
chr8 (297-343)||(5562012-5562058)
chr8 (321-386)||(7394636-7394701)
chr8 (301-394)||(30365126-30365219)
chr8 (188-225)||(31543106-31543143)
chr8 (205-266)||(38198181-38198241)
chr8 (297-330)||(42919879-42919912)
chr8 (318-394)||(7503126-7503202)
chr8 (322-386)||(11575582-11575646)
[»] chr7 (56 HSPs)
chr7 (188-388)||(41496959-41497167)
chr7 (151-345)||(33655153-33655350)
chr7 (199-369)||(24970187-24970364)
chr7 (188-388)||(47390889-47391098)
chr7 (198-388)||(40196534-40196732)
chr7 (189-344)||(34235053-34235219)
chr7 (196-387)||(42306376-42306571)
chr7 (152-393)||(13770945-13771187)
chr7 (152-370)||(25887195-25887417)
chr7 (152-370)||(1051520-1051739)
chr7 (194-387)||(43230276-43230476)
chr7 (274-388)||(18231714-18231828)
chr7 (274-384)||(4833537-4833647)
chr7 (155-393)||(41008188-41008425)
chr7 (219-388)||(45940658-45940835)
chr7 (152-262)||(39856001-39856106)
chr7 (189-343)||(17852906-17853067)
chr7 (183-344)||(34228364-34228534)
chr7 (211-338)||(40572287-40572421)
chr7 (274-385)||(10315761-10315872)
chr7 (189-317)||(37417706-37417842)
chr7 (274-345)||(32872826-32872897)
chr7 (274-388)||(13425122-13425236)
chr7 (235-333)||(22163167-22163272)
chr7 (235-333)||(22221875-22221980)
chr7 (151-387)||(26365769-26366009)
chr7 (152-266)||(31571600-31571711)
chr7 (302-388)||(48881560-48881646)
chr7 (195-252)||(23029480-23029537)
chr7 (319-388)||(39856038-39856107)
chr7 (308-388)||(36267555-36267635)
chr7 (200-339)||(42087041-42087188)
chr7 (319-388)||(31571643-31571712)
chr7 (189-253)||(10315648-10315712)
chr7 (275-343)||(19835838-19835906)
chr7 (285-393)||(31553182-31553287)
chr7 (211-388)||(33519105-33519290)
chr7 (274-334)||(47229888-47229948)
chr7 (206-266)||(48152036-48152092)
chr7 (319-388)||(13771119-13771188)
chr7 (319-388)||(28074105-28074174)
chr7 (271-388)||(30592255-30592372)
chr7 (319-388)||(34228492-34228561)
chr7 (205-274)||(38378096-38378165)
chr7 (188-241)||(40196566-40196619)
chr7 (296-343)||(2087786-2087833)
chr7 (306-345)||(30891039-30891078)
chr7 (321-388)||(37925843-37925910)
chr7 (323-393)||(47390852-47390922)
chr7 (210-260)||(48013558-48013608)
chr7 (205-266)||(18795727-18795788)
chr7 (152-193)||(28074106-28074147)
chr7 (194-226)||(33655148-33655180)
chr7 (323-387)||(33655285-33655349)
chr7 (318-346)||(34235180-34235208)
chr7 (152-260)||(37925844-37925947)
[»] scaffold0067 (3 HSPs)
scaffold0067 (188-394)||(39182-39400)
scaffold0067 (319-388)||(39363-39432)
scaffold0067 (152-226)||(39189-39259)
[»] scaffold0262 (1 HSPs)
scaffold0262 (194-384)||(16302-16500)
[»] scaffold0171 (1 HSPs)
scaffold0171 (199-369)||(15995-16173)
[»] scaffold0096 (2 HSPs)
scaffold0096 (183-343)||(6613-6780)
scaffold0096 (322-393)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (190-345)||(18807-18968)
[»] scaffold0294 (1 HSPs)
scaffold0294 (211-391)||(15320-15507)
[»] scaffold0026 (2 HSPs)
scaffold0026 (151-351)||(1174-1377)
scaffold0026 (319-387)||(1175-1243)
[»] scaffold0198 (1 HSPs)
scaffold0198 (302-387)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (296-386)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (322-388)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (323-386)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 152 - 492
Target Start/End: Original strand, 33041473 - 33041798
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||| |||||| ||| ||||  |||||||||      ||||||||||||||||||||||  ||||||||||  ||||||| ||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaa-----tttatttttcatttttaaattatagactatataatgtgtttttttaaaataa 33041567  T
Q  252 attaagtgtgattgaggtgttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 351  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||           
T  33041568 attaagtgtgattgaagtgttatttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaat------ 33041661  T
Q  352 atcccttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaagtaactcaaactaaatgagacaatgaaacattactctcaccaca 451  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  33041662 ----cttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaggtaactcaaactaaatgagacaatgaaacattactctcaccata 33041757  T
Q  452 actaaataacaccaagtaagttcacaatattaatgtctgtg 492  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33041758 actaaataacaccaagtaagttcacaatattaatgtctgtg 33041798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 199 - 388
Target Start/End: Original strand, 33235996 - 33236192
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 290  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |  ||||        ||||||||||||||||    
T  33235996 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatg 33236095  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |  |||| ||| |||| ||| |||||| |||||||||| |||||    
T  33236096 ttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctccatccaaatacacc 33236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 152 - 387
Target Start/End: Complemental strand, 9719271 - 9719034
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  ||||||||||||||||||||||| |     |||||| ||||| |||||||||| |||||||||||||||| |||| |||| |||    
T  9719271 gtgtgtttggattgagggtttatgaggggaagagaggggtg-----ggtttaattttcttttttaaattccggactatataacatgctttt-taaattaa 9719178  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||| ||||||||||| || ||||        ||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||    
T  9719177 atttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataa 9719078  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |   |||| ||||||||||||||||||  || ||||||||||||    
T  9719077 atcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 151 - 388
Target Start/End: Complemental strand, 30487547 - 30487308
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    ||||||||| |||||  |||||| |||||||||     |||| |||||||||| ||||  |||||||| ||||||||||||||||||||||| |||||||    
T  30487547 agtgtgtttcgattgagggtttaggaggggaag-----ggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaata 30487453  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||| |||||||||||| || ||||        |||||||||||||||||| ||||||||||| | |||||||| | ||| |||||||| ||||||||||     
T  30487452 aatcaagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtg 30487354  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||  |||| ||||||||||||||||||  ||||||||||||||||    
T  30487353 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 30487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 148 - 385
Target Start/End: Complemental strand, 19278282 - 19278039
Alignment:
Q  148 ttaagtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa 247  Q
    ||||||||||||||||||   ||||| ||||||||| ||||||||     |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19278282 ttaagtgtgtttggattgagagtttaggaggggaagggaggggag-----ggtttatttt-cttttttaaattacggactatataacatgtttttctaaa 19278189  T
Q  248 ataaattaagtgtgattgaggtgtta--------tttatcatgtta----atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatg 335  Q
    ||||||| ||| ||||||| || | |        ||||||||||||    |||||| ||||||||||||||||||| ||||| || ||||||||||||||    
T  19278188 ataaatttagtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatg 19278089  T
Q  336 aaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    ||||||||||  || | | ||||||||||||||||  |||||||||||||    
T  19278088 aaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 200 - 393
Target Start/End: Original strand, 1390365 - 1390566
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgttt-ttctaaaataaattaagtgtgattgaggtgttatt-------tatcatgttaatatgt 291  Q
    |||| ||||| |||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||  | |||||       ||||||||||||||||    
T  1390365 tttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattattgatcatttatcatgttaatatgt 1390464  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccata 391  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||    | | ||| ||||||||||||||  | |||||||||||||| ||    
T  1390465 taactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaacccttcatccaaacacacctta 1390564  T
Q  392 aa 393  Q
    ||    
T  1390565 aa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 152 - 388
Target Start/End: Complemental strand, 9721378 - 9721140
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||| ||||  ||||||||| || |||||||||| |     |||||| ||||| |||||||||| ||||| ||||||||||||||| |||| |||    
T  9721378 gtgtgtttgaattgagggtttatgaaggtaagagaggggtg-----ggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaa 9721285  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    | | ||||||||||| || ||||        ||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||    
T  9721284 agttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataa 9721185  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  |||| |||||||||||||||||| ||| |||||||||||||    
T  9721184 accctcccctcccttcccctcctaaaccttcaatccaaacacacc 9721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 387
Target Start/End: Complemental strand, 5585486 - 5585304
Alignment:
Q  214 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaa 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |        |||| |||||||||||||| |||||||||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  306 atatttcatagtatccgtaatttaaaaatg-aaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    | |||||||||| | ||||||||||||| | ||||||||||  | |||| ||||||||||||||||  |||||||||||||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 152 - 388
Target Start/End: Original strand, 14515476 - 14515713
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||| |||||||||||||||||| ||||  ||||| ||||||||||    
T  14515476 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaataa 14515568  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||||||||||| ||| || ||||        |||||||||| ||||||||||| || ||||||||||| ||||| | | ||||||||||||||||  |||    
T  14515569 attaagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaa 14515668  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  |||| | ||||||||||||||||  ||||||||||||||||    
T  14515669 accctccctttccttcccctcctaaaccctccatccaaacacacc 14515713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 151 - 343
Target Start/End: Complemental strand, 4097755 - 4097559
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaat 249  Q
    |||||||||||||||  |||||| ||||||||| ||||| ||     |||| | ||||| |||||||||||||||| ||||||||| ||||| | |||||    
T  4097755 agtgtgtttggattgagggtttaagaggggaagggagggaag-----ggttcacttttcttttttaaattacggacaatataacattttttttccaaaat 4097661  T
Q  250 aaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 341  Q
    ||||||||||||||||| || ||||        |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||    
T  4097660 aaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagt 4097561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 10818343 - 10818458
Alignment:
Q  273 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 372  Q
    ||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||  |||| ||||| |||||||||||||     
T  10818343 atttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactc 10818442  T
Q  373 tccatccaaacacacc 388  Q
    || |||||||||||||    
T  10818443 tcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 393
Target Start/End: Original strand, 34176397 - 34176581
Alignment:
Q  216 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaat 307  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||  || ||||        |||| |||||||||||||||||||  |||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  308 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccct-tcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||||||||| ||||||||||||||||||||| |||||  || |||| || | ||||| |||||  |||||||||||||||||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaac--tctcatctctcttccctcataaaccctccatccaaacacaccataaa 34176581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 151 - 345
Target Start/End: Complemental strand, 21607086 - 21606889
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||||  |||||| |||||||||||||     | ||  |||||  |||| ||||||||||||  ||||||| | ||||||||||||||||    
T  21607086 agtgtgtttggattgagggtttaggaggggaagagag-----atgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaata 21606992  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||| |||||||| ||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  21606991 aataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagta 21606892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 151 - 341
Target Start/End: Original strand, 31849112 - 31849305
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||| ||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||    
T  31849112 agtgtgttaggattgagggtttaagaggggaagggaggggag-----ggtttagttttcttttttaaactacagactatataacatatttttctaaaata 31849206  T
Q  251 aattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 341  Q
    ||| |||||||||||| || |||        ||||||| ||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||    
T  31849207 aatcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagt 31849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 388
Target Start/End: Original strand, 1300654 - 1300862
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa-ataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    |||| |||||||||| |||   ||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||| || ||||        |||||    
T  1300654 ggaggggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatc 1300753  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    | |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||  |||| ||| |||  || | ||||  |||||||    
T  1300754 aggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatcc 1300853  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  1300854 aaacacacc 1300862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 338
Target Start/End: Complemental strand, 10348986 - 10348850
Alignment:
Q  211 tttttaaattacggactatataacatgtttttct-aaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaacttttta 301  Q
    |||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||| || ||||        ||||| | |||||||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  10348886 aaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 189 - 388
Target Start/End: Complemental strand, 16738205 - 16737998
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattt--------atca 280  Q
    |||| |||| ||||| ||||| |||||||||||| || ||||||| |||||||||||||||||| ||||||| ||| | || |||| |        ||||    
T  16738205 ggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgatcgtatatca 16738106  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 380  Q
    ||||| ||| |||| || | |||||| |||||||||| ||| ||||||||||| ||||||||||  ||||| || ||||| ||| |||||  ||||||||    
T  16738105 tgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatcca 16738006  T
Q  381 aacacacc 388  Q
    ||||||||    
T  16738005 aacacacc 16737998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 2893670 - 2893742
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  2893670 ggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaagtgtgattga 2893742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 2892801 - 2892650
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 291  Q
    |||| ||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||  | |||        |||||||||||| ||| |    
T  2892801 tttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattt 2892702  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    ||| |||||||||||||| ||||||| | |||||||||| ||  |||||||||    
T  2892701 taa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaa 2892650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 12811221 - 12811112
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| || |||||||||||||||     || ||| ||||| | |||||||||  |||||||||| |||||||||||||||||    
T  12811221 gtgtgtttggattgagggtttaggatgggaagagaggggag-----ggattacttttcttctttaaattagagactatataatatgtttttctaaaataa 12811127  T
Q  252 attaagtgtgattga 266  Q
    |||||||||||||||    
T  12811126 attaagtgtgattga 12811112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 13583777 - 13583890
Alignment:
Q  212 ttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaa 303  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||  | ||        |||||| ||||||| ||||||| ||||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  304 aaatatttcatagt 317  Q
    ||| ||||||||||    
T  13583877 aaacatttcatagt 13583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 2900038 - 2900109
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||||||    
T  2900038 tttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaac 2900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 6034275 - 6034204
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattga 6034204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 387
Target Start/End: Original strand, 26318343 - 26318546
Alignment:
Q  192 gaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgt 283  Q
    |||||||||| ||||||  ||||||||||||| |  |||||| |||||||| |||||||||||||||||  |||| || ||||        |||||||||    
T  26318343 gaggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgt 26318442  T
Q  284 taatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaac 383  Q
    |  ||  | || ||| |||||   |||| |||  |||| ||||||||||| ||||||||||  ||||| |||||| |||||||||||| |||||||||||    
T  26318443 tgttaattcaattttctaaaagtcattttataaaatccataatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaac 26318542  T
Q  384 acac 387  Q
    ||||    
T  26318543 acac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 33040669 - 33040739
Alignment:
Q  18 caaacttatctcttcctcatgccaactcaaacaataatgtaaataggaaagtcatactgtgttaaagacta 88  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| || ||||||||||||    
T  33040669 caaacttatctcttcctcatatcaattcaaacaataatgtaaataggaaagacatgctatgttaaagacta 33040739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 388
Target Start/End: Complemental strand, 666054 - 665843
Alignment:
Q  191 agaggagggtttatttttcatttttaaattacggactatataacatgtttt------tctaaaataaattaagtgtgattgaggtgtt--------attt 276  Q
    ||||||| ||||||||||| |||||||| ||| ||||||| ||||||||||        ||||| |||||||||||| |||| || ||        ||||    
T  666054 agaggagagtttatttttcttttttaaactacagactatacaacatgttttataaaaaataaaaaaaattaagtgtggttgaagtattatatcatcattt 665955  T
Q  277 atcatgttaatatgtt-aactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 375  Q
    |||||||||||||||| || ||||||||| | |||||||| ||| | ||||||||||||||||| | |||  |||| || |||||||||||||||  | |    
T  665954 atcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccct-c 665856  T
Q  376 atccaaacacacc 388  Q
    |||||||||||||    
T  665855 atccaaacacacc 665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 1395691 - 1395834
Alignment:
Q  210 atttttaaattacggactatataacatg-tttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgttaatatgttaacttttt 300  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||||||  |         | |||||||||| ||||||||||| |||||    
T  1395691 attttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttt 1395790  T
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    |||||| |||  | ||| |  |||||||||||||||||||||||    
T  1395791 aaaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 9721141 - 9721210
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||||| ||||||| ||||||||| ||||||||     |||||||||||||||||||||||||||||    
T  9721141 gtgtgtttggattgaaggtttaggaggggaagggaggggag-----ggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 10818300 - 10818231
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| ||||| |||||| |||| ||||||||||||||||||  || |||||||||||||    
T  10818300 tccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacacc 10818231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 9298709 - 9298636
Alignment:
Q  175 gaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaa 248  Q
    ||||||||| |||||||| |||||||||| |||||| |||||||||||||||  ||| | |||||||| |||||    
T  9298709 gaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 10818232 - 10818316
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttt 241  Q
    ||||||||||||||  |||||| ||||||||| |||||||  |     |||||||||| |||||||||||||||| ||||||||||||||    
T  10818232 gtgtgtttggattgagggtttaggaggggaagggaggggattg-----tttatttttcttttttaaattacggacaatataacatgtttt 10818316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 9298625 - 9298685
Alignment:
Q  286 atatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||  |||||||| | |||||||||||||| ||||||||||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaac 9298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 19278211 - 19278278
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| ||||| |||||  |||| ||||||||||||||||||| || ||||||||||||    
T  19278211 tccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 344
Target Start/End: Complemental strand, 30850153 - 30849960
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||| |||||| |||||||     |||| ||||   |||||||||| | | ||||||| |||||||| ||||| ||    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagag-----tttacttttttattttaaattatgaattatataatatgtttttttaaaacaa 30850059  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||| ||| | ||||| || ||||        ||||||||||| ||| ||||  ||||||||||||||| ||||||| ||||||||||||| |||| ||||    
T  30850058 atttagtataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaa 30849961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 2893053 - 2892890
Alignment:
Q  191 agaggagggtttatttttcatttttaaattacggactatataacatgt-ttttctaaaataaatt--aagtgtgattgaggtgtta--------tttatc 279  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| || | |||| | |||||||||   ||||||||||| || |||        ||||||    
T  2893053 agaggagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatc 2892954  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||| ||| |||  || ||| ||||||||||||||| | |||||||||||||  ||||||||    
T  2892953 atgttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaa 2892890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 14548793 - 14548738
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||| |||||||||    
T  14548793 tttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattga 14548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 7776046 - 7775996
Alignment:
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 341  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||||    
T  7776046 ttaactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagt 7775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 9719034 - 9719103
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     | |||||||||||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggag-----gatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 14515544 - 14515475
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14515544 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 25741476 - 25741566
Alignment:
Q  223 ggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaa 305  Q
    |||||||||||||||||||| |||||||||||||| |||| ||| || |||        |||||||| ||| |||||||||||||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaactttttaaaaa 25741566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 1300829 - 1300787
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatat 231  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  1300829 ggaggggagggtttacttttcatttttaaattacggacaatat 1300787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 10818426 - 10818388
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggac 226  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  10818426 gggaggggagggtttacttttcatttttaaattacggac 10818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 23091129 - 23091195
Alignment:
Q  317 tatccgtaatttaaaaat-gaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 382  Q
    |||||||||||||||||  ||||||||| |  |||| ||||||||||||||||||  ||||||||||    
T  23091129 tatccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 31799070 - 31799120
Alignment:
Q  296 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||| |||| ||| ||||||||||||||||| |||||||||||    
T  31799070 tttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaaac 31799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 21607020 - 21607085
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||||||||| |||| ||||||||||   || |||||||||||||||  || ||||||||||||    
T  21607020 gtaatttaaaaacgaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 4097686 - 4097754
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| ||||||| |||  | || |||||||||||| |||||  || ||||||||||||    
T  4097686 tccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 21606879 - 21606915
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacgga 225  Q
    |||| |||||||||| |||||||||||||||||||||    
T  21606879 ggaggggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 23091037 - 23090997
Alignment:
Q  348 tcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| |||||||||||||||||| ||| |||||||||||||    
T  23091037 tcccctcccttcccctcctaaaccttcaatccaaacacacc 23090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 23090998 - 23091038
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggag 192  Q
    |||||||||||||| ||||||| ||||||||| ||||||||    
T  23090998 gtgtgtttggattgaaggtttaggaggggaagggaggggag 23091038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 152 - 393
Target Start/End: Complemental strand, 41110562 - 41110318
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  ||||| ||||||||||     |||||||| |||||| ||||| |||||||||||||||||| |||||||||||||| |||||||    
T  41110562 gtgtgtttggattgagggtttgtgaggggaag-----ggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataa 41110468  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||||||||||||||| || ||||        ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  41110467 attaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaa 41110368  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    || ||| | |||||||||||||||||   |||||||||||||||||||||    
T  41110367 accttctcctcccttcccctcctaaatcctccatccaaacacaccataaa 41110318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 188 - 388
Target Start/End: Original strand, 24560251 - 24560459
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||        |||||    
T  24560251 gggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatc 24560350  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||    
T  24560351 atgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatcc 24560450  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  24560451 aaacacacc 24560459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 25655187 - 25654991
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt---------- 272  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||              
T  25655187 gagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatatgatc 25655088  T
Q  273 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    ||||||||| |||||||||||||| || |||||| ||||| |||| | |||||| ||||||||||||||||||  |||| |||||||||||||||||    
T  25655087 atttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 151 - 393
Target Start/End: Complemental strand, 18654843 - 18654597
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||| ||||  |||||| ||||||||| ||||||||||   | |||| ||||    |||||||||||||||||||||||||||| |||||||||    
T  18654843 agtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttt----tttaaattacggactatataacatgtttctctaaaata 18654748  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    |||||||||| ||||| || ||||        |||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  ||    
T  18654747 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatcta 18654648  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||  ||||||| ||| |||||||||||  |||||||||||||||| ||||    
T  18654647 aaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 18654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 220612 - 220442
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-------- 274  Q
    |||| ||||| ||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||            
T  220612 gagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttataagattgt 220513  T
Q  275 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  220512 ttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaac 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 52473966 - 52474139
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaact 296  Q
    ||||| ||||||||||||||| ||||||||||||| || ||||||||||||  ||||||||| || ||||        ||||||| ||||||||||||||    
T  52473966 ttttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaact 52474065  T
Q  297 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 370  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||  |||  ||||||||||||||||||    
T  52474066 ttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaac 52474139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 30200293 - 30200133
Alignment:
Q  196 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt-----------gttatttatcatgtt 284  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||           ||| ||||| |||||    
T  30200293 agggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgtt 30200194  T
Q  285 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  30200193 aatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 189 - 345
Target Start/End: Complemental strand, 37102358 - 37102194
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat-------ttatca 280  Q
    |||| ||| |||||| || || |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||       |||| |    
T  37102358 ggaggggaaggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattatatgatcgttatta 37102259  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  37102258 tgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 155 - 345
Target Start/End: Original strand, 21773788 - 21773981
Alignment:
Q  155 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatt 254  Q
    ||||||||||| ||||||| ||||||||| || || ||     ||| || ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaag-----ggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaatt 21773882  T
Q  255 aagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||| |  |||        |||||||||| |||||||||||||||||||||| ||||| |||| | |||||||||||||| ||||||||||    
T  21773883 aagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 393
Target Start/End: Complemental strand, 41040153 - 41039947
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 286  Q
    ||||||||| |||||  |||||||||||||| || |||||||| |||| ||||||||| |||| |||||||| || ||||        ||||||||||||    
T  41040153 gagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaa 41040054  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||||   | |  || ||||||||||||||| |||||||||||||||    
T  41040053 tatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttccatccaaacaca 41039954  T
Q  387 ccataaa 393  Q
    || ||||    
T  41039953 ccctaaa 41039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 189 - 371
Target Start/End: Original strand, 46556178 - 46556369
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttat---------- 278  Q
    |||| |||| ||||| ||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||| || |||| |||              
T  46556178 ggaggggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgt 46556277  T
Q  279 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 371  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||| ||| |||| ||||||||||    
T  46556278 catgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac-ctcccctccattcctctcctaaact 46556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 188 - 384
Target Start/End: Complemental strand, 27542141 - 27541937
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    ||||| |||| |||| |||||| ||||||||||| | |||||||||||| ||||||||||||||||||| ||||||||| || ||||        |||||    
T  27542141 gggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatc 27542042  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    ||||||||||||||  ||||||| || ||||||||||| ||  |||||||||||||||| || |||  || | ||||||||||||||||||  || ||||    
T  27542041 atgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatcc 27541942  T
Q  380 aaaca 384  Q
    |||||    
T  27541941 aaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 185 - 339
Target Start/End: Complemental strand, 9312687 - 9312522
Alignment:
Q  185 gaggggagaggagggtttatttttcatttttaaattacggactatataacat---gtttttctaaaataaattaagtgtgattgaggtgttat------- 274  Q
    |||||||| |||||||||  ||||| |||||||||||| |||||||||||||   | ||||||||||||||||||||||||||   || ||||           
T  9312687 gaggggaggggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaattaagtgtgatttgagtattatatgattg 9312588  T
Q  275 -ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
     ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  9312587 tttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaa 9312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 388
Target Start/End: Complemental strand, 36569072 - 36568906
Alignment:
Q  229 tataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatc 320  Q
    |||| |||||||||||||||||||||||||||||||||  | ||||        |||||||||||||||||||||||||| ||||| |||||||||| |     
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgtt 36568973  T
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    || |||||||||||||||| |||||  |||| ||| |||| |||||||||  ||||||||||||||||    
T  36568972 cgaaatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccctccatccaaacacacc 36568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 228 - 388
Target Start/End: Complemental strand, 16275875 - 16275707
Alignment:
Q  228 atataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtat 319  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||        |||||||||||||| |||||||||||| |||| |||||||| | |    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  320 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||| |||||||||||||| ||| |||  |||| |||||| ||||  |||||  ||||||||||||||||    
T  16275775 ccgaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccatccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 188 - 333
Target Start/End: Complemental strand, 2387970 - 2387817
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatc 279  Q
    ||||| |||||||||| ||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| |  | |||        ||||||    
T  2387970 gggaggggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatc 2387871  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 333  Q
    |||||| ||| ||||||| |||||||| ||| |||||| |||||||||||||||    
T  2387870 atgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 28581291 - 28581189
Alignment:
Q  285 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||  |||| |||||||| || ||||||  ||||||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  385 cac 387  Q
    |||    
T  28581191 cac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 205 - 386
Target Start/End: Original strand, 37807131 - 37807321
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaa-ttaagtgtgattgaggtgttat--------ttatcatgttaatatgttaac 295  Q
    ||||| |||||||| |||| |||||||||||| |||||  |||||||| |||||||||||||| || ||||        ||||||||||||||| |||||    
T  37807131 ttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaac 37807229  T
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaactttccatccaaacaca 386  Q
    ||||||||||| |||||||||| |||  |||||||||| ||||||||||||||  | || ||| ||||||||||||  ||||| ||||||||    
T  37807230 tttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaacattgtcctctcttccccctcctaaaccctccattcaaacaca 37807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 651771 - 651841
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 264  Q
    |||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  651771 ggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgatt 651841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 386
Target Start/End: Complemental strand, 10748484 - 10748299
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt---------------atttatcatgttaatatgttaac 295  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  | || ||               |||||||||||||||||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||| |||| ||| |  |||||||||||||||     ||||||  ||   ||||||||||||||||||  ||||||||||||||    
T  10748384 tttttaaaaaacattttataatgcccgtaatttaaaaat-----gtaaactctcttctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 46204931 - 46204998
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  46204931 gtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtgattga 46204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 14898022 - 14898088
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattga 14898088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 28582719 - 28582641
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  28582719 gggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttga 28582641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 43005942 - 43005804
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 286  Q
    |||| |||| ||||| |||||||||| |  |||||||||||| ||||||||||||||||| | | ||||||| || ||||        ||||||| ||||    
T  43005942 gaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatattaa 43005843  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatt 327  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  43005842 tatgttaactttttaaaaaatatttcata--atccgtaatt 43005804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 6803442 - 6803333
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||||||||| ||||||| |||||||||||||| |||||     |||| ||||| |||||||||||| ||||||  || | |||||| ||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagag-----tttaattttcttttttaaattacagactatgcaataagtttttataaaataa 6803348  T
Q  252 attaagtgtgattga 266  Q
    |||| ||||||||||    
T  6803347 attatgtgtgattga 6803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 339
Target Start/End: Original strand, 52185060 - 52185207
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 289  Q
    ||||| ||||| ||||||||||||  | |||||||||||||||| |||||||||||||| | | ||||| || ||||        |||||||||||||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatat 52185159  T
Q  290 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    |||||||||||| |||||||||  |||| ||| |||||||||||| ||||    
T  52185160 gttaactttttataaaatattt--tagtgtccataatttaaaaataaaaa 52185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 55327422 - 55327563
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactt 297  Q
    |||| |||||||||||||||||| |||||||| |||||| |||||||| || ||||||||| |  |||        ||||| ||||||||| | ||||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  298 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    ||||||||| |||||||| | ||||| ||||||||| |||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 54574560 - 54574493
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| |||||| ||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  54574560 gtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaagcgtgattga 54574493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 387
Target Start/End: Complemental strand, 40464096 - 40463874
Alignment:
Q  168 ggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgag 267  Q
    |||||||||| |||| |||||||||||     |||| ||||| ||| ||||| | || ||| ||||||| |||||||||||||||||||||| ||||||     
T  40464096 ggtttatgagaggaatagaggggagag-----tttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaa 40464002  T
Q  268 gtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 359  Q
     | |||        |||||||||||| | | ||||  |||||||||| | || ||||| |||||||||||||||||||||||| ||| || ||||  ||     
T  40464001 tttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagtacacactctcatcgttta 40463902  T
Q  360 ccctcctaaactttccatccaaacacac 387  Q
     |||| |||||  | |||||||||||||    
T  40463901 tcctcataaacccttcatccaaacacac 40463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 34641163 - 34641232
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  34641163 tccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 34641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 10943852 - 10943752
Alignment:
Q  155 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatt 254  Q
    |||||||||||  |||||||||||| ||||||||||||     |||| | |||| |||||||||||||| || ||  || |||||||| |||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggag-----ggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaatt 10943758  T
Q  255 aagtgt 260  Q
    ||||||    
T  10943757 aagtgt 10943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 17474301 - 17474209
Alignment:
Q  296 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||||||||| |||| ||| | ||||||||||||||| ||||||||||| || ||||  ||| |||||||||||  || ||||||||||||    
T  17474301 tttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaacttttccattactttccctcctaaaccctcaatccaaacacac 17474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 24253895 - 24253970
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaa-cattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    ||||||||||||||| |||||||||| | ||||| ||||||||||| ||||||  |||||||||||||||| |||||    
T  24253895 tccgtaatttaaaaaagaaaagtaaatccttccc-tcccttccccttctaaaccctccatccaaacacaccctaaaa 24253970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 26135952 - 26136044
Alignment:
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||| ||||| ||| | ||||||||||||||| |||||||||||  |||  ||||||||||||||||||  ||||| ||| |||||| ||||    
T  26135952 aaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacaccttaaa 26136044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 31684362 - 31684398
Alignment:
Q  230 ataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattga 31684398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    |||||||||||| ||||||||||  ||||  ||||||||||||||||||| || ||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 220570 - 220644
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||||||||||||| ||||||||||   |||| ||||||| ||||||||||  |||||||||||| ||| ||||    
T  220570 tccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaa 220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 17474356 - 17474446
Alignment:
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    |||||||||||||||| | | ||| |||||||||||||  |||||| |||  |||| |||||||||||||| |||  || |||||||||||    
T  17474356 tttttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 28582682 - 28582732
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||    
T  28582682 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 28582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 41110494 - 41110563
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||||||  ||||  || |||||||||||||    
T  41110494 tccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacc 41110563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 260
Target Start/End: Original strand, 12790377 - 12790478
Alignment:
Q  153 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 252  Q
    |||||||||||||  |||||| ||| ||||||||| ||||      ||||| ||||| |||||| |||   | |||||||||||||||||||| ||||||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggag------gtttacttttcttttttatattgtaggctatataacatgtttttctataataaa 12790470  T
Q  253 ttaagtgt 260  Q
    ||||||||    
T  12790471 ttaagtgt 12790478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 31894056 - 31894020
Alignment:
Q  230 ataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattga 31894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 37236963 - 37237034
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||| ||| |||||||||||||||||| |||  || || ||||||||  ||||||||||||||||||||||    
T  37236963 ggagggcttacttttcatttttaaattacagacgctacaaaatgtttttg-aaaataaattaagtgtgattga 37237034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 13082943 - 13082856
Alignment:
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||| |||||||||| |||||| ||||||||| |||| ||||| ||||  || ||| | || ||||||  ||||||||||||||||    
T  13082943 aaaaaacatttcatagtgtccgtattttaaaaataaaaattaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 55428552 - 55428619
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||    
T  55428552 tccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 23028086 - 23028168
Alignment:
Q  306 atatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| |||||||||||||||| ||||||||    | || ||  ||||||||| ||||  ||||||||||||||||    
T  23028086 atatttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 6803377 - 6803442
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||||||||| ||||| |||||  || | || ||||||||||||||| ||| ||||||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 21773853 - 21773788
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    ||||||||||| ||| |||||||| ||  | || |||||||||||||||||| ||| |||||||||    
T  21773853 tccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 24560288 - 24560219
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  24560288 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 24560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 30200123 - 30200160
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  30200123 ggaggggagggtttagttttcatttttaaattacggac 30200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 37102184 - 37102221
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  37102184 ggaggggagggtttagttttcatttttaaattacggac 37102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 52474125 - 52474088
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacgga 225  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52474125 gggagaggagggtttactttttatttttaaattacgga 52474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 30200264 - 30200312
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctccta 367  Q
    ||||||||||||||| |||||||||||  | || |||||||||||||||    
T  30200264 tccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctccta 30200312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 42772047 - 42772087
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggag 192  Q
    |||||||||||||| ||||||| ||||||||| ||||||||    
T  42772047 gtgtgtttggattgaaggtttaagaggggaagggaggggag 42772087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 8e-59; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 152 - 388
Target Start/End: Complemental strand, 36347782 - 36347543
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| || |||||||     |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  36347782 gtgtgtttggattgagggtttaggaggggaagggaagggagag-----tttacttttcttttttaaattacggactatataacatgtttttctaaaataa 36347688  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||||||||||||||| || ||||        |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |    
T  36347687 attaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtga 36347588  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  || | ||||||||||||||||||  | ||||||||||||||    
T  36347587 actctctcttcccttcccctcctaaacccttcatccaaacacacc 36347543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 189 - 388
Target Start/End: Original strand, 23748130 - 23748337
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 280  Q
    |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| || ||||        ||||||    
T  23748130 ggaggggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatca 23748229  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 380  Q
    |||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||||| |||  |||| ||||||||||||||||||  ||||||||    
T  23748230 tgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatcca 23748329  T
Q  381 aacacacc 388  Q
    ||||||||    
T  23748330 aacacacc 23748337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 154 - 390
Target Start/End: Complemental strand, 8427110 - 8426879
Alignment:
Q  154 gtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 253  Q
    ||||||||||||  |||||| ||||| ||| ||||||||||     |||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagag-----tttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaat 8427016  T
Q  254 taagtgtgattgaggtgttattt-atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca 352  Q
    |||||| |||||| || |||| | ||||| |||  ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||  ||||     
T  8427015 taagtgcgattgaagtattatatgatcat-ttatcatgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctccct 8426917  T
Q  353 tcccttcccctcctaaactttccatccaaacacaccat 390  Q
    ||||||||||||||||||| ||||| |||| |||||||    
T  8426916 tcccttcccctcctaaactctccattcaaatacaccat 8426879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 188 - 351
Target Start/End: Complemental strand, 15224904 - 15224733
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    ||||| ||| |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||        |||||    
T  15224904 gggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagtgtgattgaagtattatatgatcatttatc 15224805  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 351  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  15224804 atgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacactccc 15224733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 388
Target Start/End: Complemental strand, 36046442 - 36046206
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||||||||||||| ||||||||      ||||| ||||  |||||||||||||||| |||||||||| |||| ||||||||    
T  36046442 gtgtgtttggattgagggtttatgaggggaagggaggggag------gtttacttttgttttttaaattacggacgatataacatgcttttataaaataa 36046349  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||| ||||  ||||| || ||||        ||| |||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||    
T  36046348 attgagtg--attgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataa 36046251  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  |||| ||  ||||||||||||||  ||||||||||||||||    
T  36046250 actctcccctcatttcccctcctaaaccctccatccaaacacacc 36046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 39732926 - 39732774
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 291  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||        |||||||||||||||||    
T  39732926 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 39732828  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||| |||| |||||||| | | |||||||||||||||||||||||||    
T  39732827 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 39732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 189 - 388
Target Start/End: Complemental strand, 19567030 - 19566822
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 280  Q
    |||| |||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||        |||||||    
T  19567030 ggaggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatca 19566931  T
Q  281 tgttaatatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    | |||||||| ||||||||| |||||| |||||||||| || ||||||||||| ||| ||||||||  |||  || ||| |||| ||||||  ||| |||    
T  19566930 ttttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctccattctctttcccttctaaacactccgtcc 19566831  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  19566830 aaacacacc 19566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 189 - 345
Target Start/End: Original strand, 39821704 - 39821868
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatca 280  Q
    |||| |||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||| | || ||        ||||||||    
T  39821704 ggaggggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatca 39821803  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||| |||||| | ||||||||||| ||||||||||||||| ||||| |||||    
T  39821804 tgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaac 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 16565832 - 16565978
Alignment:
Q  211 tttttaaattacggactatata--acatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaacttttt 300  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || ||||        ||||||| || |||||||||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaacttttt 16565931  T
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacat 347  Q
    ||||||  |||||||||||||||||||||||||| ||||||||||||    
T  16565932 aaaaaacgtttcatagtatccgtaatttaaaaataaaaagtaaacat 16565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 149 - 366
Target Start/End: Complemental strand, 36567096 - 36566874
Alignment:
Q  149 taagtgtgtttggattggaggtttatgaggggaagagaggggagaggagggttta-tttttcatttttaaattacggactatataacatgtttttctaaa 247  Q
    |||||||||||||||||  |||||| |||||||| |||||  ||| ||   |||| |||||| ||||||||||| | | ||||||||||||||||||| |    
T  36567096 taagtgtgtttggattgagggtttaggaggggaatagagg--agatga---tttactttttcgtttttaaattatgaattatataacatgtttttctata 36567002  T
Q  248 ataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaata-tttcatagtatccgtaatttaaaaatgaaa 338  Q
    ||||||||| ||||||||| || ||||        ||||||||||||||||||||||||||| |||| | ||||||| | ||||||||||||||||||||    
T  36567001 ataaattaattgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaa 36566902  T
Q  339 agtaaacattcccatcccttcccctcct 366  Q
    ||||||   || ||||||||||||||||    
T  36566901 agtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 40022427 - 40022615
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta--atatgttaacttttt 300  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| || ||||        ||| ||| |||  ||||||| |||||||    
T  40022427 tttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 40022526  T
Q  301 aaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||  |||||||||| || ||||||||||||||||| ||||||  |||| ||||||| |||| |||||  ||||||||| ||||||    
T  40022527 aaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 185 - 384
Target Start/End: Original strand, 12541796 - 12541999
Alignment:
Q  185 gaggggagaggagggtttatttttcatttttaaattacggactatataacat-gtttttctaaaataaattaagtgtgattgaggtgtta--------tt 275  Q
    |||||||| |||| || || ||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||| ||  ||        ||    
T  12541796 gaggggaggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagtactatatgatcgtt 12541895  T
Q  276 tatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 375  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| |||||||    ||||||||||||  | ||| |||||||  |||||||||  |||    
T  12541896 tatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattt----atgaaaagtaaatctaccc-tcccttcttctcctaaaccctcc 12541990  T
Q  376 atccaaaca 384  Q
    |||||||||    
T  12541991 atccaaaca 12541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 34209592 - 34209706
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |  | || |||| |||| | ||||||  |    
T  34209592 tttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaatctcttccctcccctcccattctaaaccct 34209691  T
Q  374 ccatccaaacacacc 388  Q
     ||||||||||||||    
T  34209692 tcatccaaacacacc 34209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 28262642 - 28262500
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 290  Q
    ||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||  |||||||||  | |||        |||||||||||| |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 333  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 387
Target Start/End: Complemental strand, 31795982 - 31795772
Alignment:
Q  185 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------ttt 276  Q
    |||||||  |||||| ||| ||||| ||| ||||| ||||| || ||||||||||||| ||||||||||||||||||||||| || |||        |||    
T  31795982 gaggggaagggagggattaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgttt 31795883  T
Q  277 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcca 376  Q
    ||||||||  ||| |||  |||| ||||||  ||||||||| ||||||||||||||| |||||||||    |||| ||||||| |||| |||||  ||||    
T  31795882 atcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctcca 31795783  T
Q  377 tccaaacacac 387  Q
    |||||||||||    
T  31795782 tccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 345
Target Start/End: Original strand, 7681293 - 7681443
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattt-atcatgttaatat---gttaa 294  Q
    |||| |||||||||||| ||||||||| ||||||| |  ||||| ||||||||||||||||||||||| || |||| | ||| | |  ||||   |||||    
T  7681293 gtttgtttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgtatatcatgttaa 7681392  T
Q  295 ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||| ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  7681393 cttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaac 7681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 9631688 - 9631802
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||||||||||||||  | ||||||| || ||||||||||||||| ||||||| |||  ||   |||||| |||||||||||  |    
T  9631688 tttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccct 9631787  T
Q  374 ccatccaaacacacc 388  Q
    |||||||||||||||    
T  9631788 ccatccaaacacacc 9631802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 200 - 351
Target Start/End: Complemental strand, 29525931 - 29525768
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta----------tttatcatgttaatat 289  Q
    |||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||| ||||||||| || |||          ||||||||||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  290 gttaacttt--ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 351  Q
    |||||||||    |||||| | ||||||||||| ||||||||||| |||||||| |||| ||||    
T  29525831 gttaactttccaaaaaaaaaaattcatagtatcagtaatttaaaattgaaaagtgaacactccc 29525768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 27926681 - 27926752
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||| |||||    
T  27926681 tttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 35736178 - 35736283
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| |||||||| ||     ||| ||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  35736178 gtgtgtttggattgagggtttaggaggggaagggaggggagggg-----ttaattttcttttttaaatcacggactagataacatgtttttctaaaataa 35736272  T
Q  252 attaagtgtga 262  Q
    || ||||||||    
T  35736273 atgaagtgtga 35736283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 339
Target Start/End: Original strand, 9426988 - 9427179
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||||||||| | ||||| ||||||||| |||| |||     |||||  ||||| ||||||||||||  ||||||||||||||||||| ||| |||    
T  9426988 gtgtgtttggattgaaagtttaggaggggaagggaggagag-----ggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaa 9427082  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaacttt-ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    |||| | |||||||| || |||        ||||||||| ||||||| |||||||   |||||| |||| ||||| |||||||||||||||||||||    
T  9427083 attatgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 42316880 - 42316809
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |  | ||||||||||||||||||||||    
T  42316880 tttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaac 42316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  239 ttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt 328  Q
    |||||||||||||||||||||||||||  || ||||        |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 1583222 - 1583272
Alignment:
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 341  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 1583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 2241471 - 2241570
Alignment:
Q  215 taaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaa 306  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||| || |||        ||||||||||||||||||||| |||| ||||||    
T  2241471 taaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatcatgttaatatgttaaattttaaaaaaa 2241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 37740085 - 37739949
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaac 295  Q
    ||||| |||||||||| | || |||||||||||||||| |||||||||||||||||||||||| || |||        |||||||||||||||| |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaat 334  Q
    ||||| ||||  | |||||||| | |||||||| |||||    
T  37739985 tttttgaaaa--acttcatagtgttcgtaattttaaaat 37739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 9592022 - 9591973
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9592022 tttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 36347714 - 36347783
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  36347714 tccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacacc 36347783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 35736337 - 35736429
Alignment:
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||  ||||||||| |||| |||||||||| ||||||| | |  |||| ||||||| ||||||||||  ||||||||||||||||    
T  35736337 tttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacacc 35736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 887261 - 887351
Alignment:
Q  297 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| ||||| |||| |||| |||||||||||||||| ||||||||| |  |||| |||||||||||||||||| || |||||| |||||||    
T  887261 tttttaaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacctt-catccagacacacc 887351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 41841722 - 41841793
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattg 265  Q
    |||||||||  ||||| ||||||||||||  |||||||||||| |||| ||||||||||||||| |||||||    
T  41841722 ggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaagggtgattg 41841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 45257456 - 45257555
Alignment:
Q  296 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    |||| ||||||| |||| ||| ||||||||||||||||| |||||||||||  || | ||||||||| |||||||   |||||||||||||||| |||||    
T  45257456 ttttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaaaa 45257555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 6721820 - 6721754
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||| ||||||||  ||||| |||||| |||||||||||||||||||| ||||||||||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattga 6721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 9427053 - 9426985
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccat 390  Q
    |||||||||||| |||||  ||||  || | |||||||||||||||||||||| |||||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacaccat 9426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 15224868 - 15224936
Alignment:
Q  320 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacacc 15224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 388
Target Start/End: Original strand, 17380007 - 17380083
Alignment:
Q  312 catagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||| |||||||||||||||||||||  ||||  |||| || |||||||||||||||  || |||||||||||||    
T  17380007 catagtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacacc 17380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 34187644 - 34187577
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| |||||| ||| ||||| | |||||| |||||||||| || |||||||||||||    
T  34187644 cgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacacc 34187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 41778807 - 41778885
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||| |||||||||| ||||    ||||||||| ||||  ||||| |||||||| |||||||||||||||||||||||    
T  41778807 gggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaattaagtgtgattga 41778885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 39732901 - 39732978
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaaca 396  Q
    ||||||||||||||| ||||||||||   |||| | ||||||||||  |||| ||| ||||||||||||| |||||||    
T  39732901 tccgtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaacacaccctaaaaca 39732978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 27926613 - 27926669
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatta 255  Q
    ||||||||||| |||||||||   ||| | |||||||||||||||||||||||||||    
T  27926613 gtttatttttcttttttaaatactggattgtataacatgtttttctaaaataaatta 27926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  326 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||  || ||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 22356177 - 22356252
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    ||||||||||||||| ||||| | |||  |||| |||||||||||||||||   || ||||||||||||| |||||    
T  22356177 tccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaaa 22356252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 31061428 - 31061361
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||  |||||| | |  |||||||| |||||||||||||| ||| |||||||||||||    
T  31061428 cgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacacc 31061361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 35736246 - 35736172
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||| ||||||||| ||||| ||| |  |||| ||||||||||||||||||  || ||||||||||||| ||||    
T  35736246 tccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaa 35736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 36046207 - 36046276
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||| |  |||||| ||||||||  ||||||||||     |||||||||||||||||||||||||||    
T  36046207 gtgtgtttggatggagggtttaggaggggaaatgaggggagag-----tttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 333
Target Start/End: Complemental strand, 39354378 - 39354231
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 285  Q
    |||| ||||| ||||  ||||||||||||    |||||||||||||| ||||||||||| | ||||||||||| || |||         |||| ||||||    
T  39354378 ggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgtta 39354279  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 333  Q
     ||| |||| ||||| |||||||||||||| | | |||||||||||||    
T  39354278 ttattttaatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 886958 - 887028
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||| ||| ||||| ||||||||||||  || |||||| ||| |||| |||||||||||| ||||||||||    
T  886958 ggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtgattga 887028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 2381174 - 2381125
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    ||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  2381174 tttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgt 2381125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 16713587 - 16713494
Alignment:
Q  295 ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||| ||||||||||| ||| | | |||||||||||||| |||| | |||  |||| |||||||||||| |||||  || ||| |||||||||    
T  16713587 cttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 32503232 - 32503269
Alignment:
Q  227 tatataacatgtttttctaaaataaattaagtgtgatt 264  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  32503232 tatataacatatttttctaaaataaattaagtatgatt 32503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 36046375 - 36046443
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||||  |||||||||| | ||| |||||||||||| |||||  || |||||||||||||    
T  36046375 tccgtaatttaaaaaacaaaagtaaacctcccc-tcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 41841750 - 41841678
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    |||||||||||| |||||  ||||  ||||||||||| ||||||||||   || ||||||||||||| |||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacaccttaaaa 41841678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 152 - 388
Target Start/End: Original strand, 54935070 - 54935311
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  54935070 gtgtgtttggattgagggtttaggaggggaagggagggg----gagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataa 54935165  T
Q  252 attaagtgtgattgaggtgtta---------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||||||||||||||| || ||          |||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||| ||    
T  54935166 attaagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaata 54935265  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||  |||| ||||||||||||||||||  ||||||||||||||||    
T  54935266 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 54935311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 195 - 388
Target Start/End: Original strand, 27735786 - 27735987
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaa 286  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||        ||||||||||||||    
T  27735786 gagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaa 27735885  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    |||| ||||| ||||||||| |||| ||||| ||||||||||||||||||||| | |||  |  | ||||||||||||||||||  ||||||||||||||    
T  27735886 tatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacaca 27735985  T
Q  387 cc 388  Q
    ||    
T  27735986 cc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 45741947 - 45742132
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||        ||||||||||||||||||||||||||||    
T  45741947 tttttaaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaa 45742046  T
Q  303 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| |||||||||| |||||||||||||||||||||||||||  |||| |||||| ||| |||||||  | ||||||||||||||    
T  45742047 aaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacacc 45742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 152 - 371
Target Start/End: Complemental strand, 31348562 - 31348340
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||   ||||| ||||||||     ||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31348562 gtgtgtttggattgagagtttaggaggggaa-----gggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataa 31348468  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||| ||||||||||  | |||        |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  31348467 attatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 31348368  T
Q  344 acattcccatcccttcccctcctaaact 371  Q
    ||  | || |||||||||||| ||||||    
T  31348367 acccttccctcccttcccctcataaact 31348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 151 - 393
Target Start/End: Complemental strand, 5731073 - 5730827
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||| ||||  |||||| ||||||||| ||||||||||   | |||| ||||    |||||||||||||||||||||||||||| |||||||||    
T  5731073 agtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttt----tttaaattacggactatataacatgtttctctaaaata 5730978  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    |||||||||| ||||| || ||||        |||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  ||    
T  5730977 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatcta 5730878  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||  ||||||| ||| |||||||||||  |||||||||||||||| ||||    
T  5730877 aaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 5730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 152 - 394
Target Start/End: Original strand, 37711141 - 37711371
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37711141 gtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataa 37711240  T
Q  252 attaagtgtgattgaggtgttat-ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcc 350  Q
    ||||||||||||||| || |||| | ||||| |||  |||||            ||||||| ||||| ||||||||||||||||||||  |||||  |||    
T  37711241 attaagtgtgattgaagtattatatgatcat-ttatcatgtt------------aatattttatagtgtccgtaatttaaaaatgaaatctaaaccctcc 37711327  T
Q  351 catcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    | ||||||||||||||||||  |||||||||||||||| |||||    
T  37711328 cctcccttcccctcctaaaccctccatccaaacacaccctaaaa 37711371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 388
Target Start/End: Original strand, 54320474 - 54320676
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 285  Q
    |||||||||  ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  || ||||        |||||||||||    
T  54320474 ggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgtta 54320573  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    ||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||  |||| ||||||||||||||||||  || ||||||||||    
T  54320574 atatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacac 54320673  T
Q  386 acc 388  Q
    |||    
T  54320674 acc 54320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 198 - 388
Target Start/End: Complemental strand, 49735668 - 49735470
Alignment:
Q  198 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 289  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||        ||||||||||||||     
T  49735668 ggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaatag 49735569  T
Q  290 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| | |||||||  | ||||||||||||||||||||||| |||  |||| ||||||||||||||||||  || |||||||||||||    
T  49735568 gttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 206 - 388
Target Start/End: Original strand, 41174397 - 41174587
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt 297  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||| || ||||        |||| ||||||||||| ||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactt 41174496  T
Q  298 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||  |||||||||| ||| ||| ||||||||||||| |||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  41174497 tttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacacc 41174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 382
Target Start/End: Original strand, 35248738 - 35248922
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgttaatatgttaactt 297  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  298 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 382  Q
    || ||||||||||    ||| ||| |||||||||| ||||||||||||  |||| ||||| || |||||||||  ||||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 152 - 327
Target Start/End: Original strand, 26166940 - 26167118
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||  ||||||||||     ||| |||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  26166940 gtgtgtttggattgagggtttaggaggggaatggaggggagag-----tttgtttttcttttttaaattacagactatataacatgtttctctaaaataa 26167034  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatt 327  Q
    ||||||||||||||| || |||        ||||||||||||||||||||||| || |||||| |||||| ||| |||||||||    
T  26167035 attaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 364
Target Start/End: Complemental strand, 1968600 - 1968377
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||| ||||     |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  1968600 gtgtgtttggattgagggtttaggaggggaagggagggaagag-----tttaattttcatttttaaattacggactatataatatgtttttctaaaataa 1968506  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaacttt-------ttaaaaa-atatttcatagtatccgtaatttaaaaatg 335  Q
    || | |||||||||| || |||        |||||||||||||||||||||||||       ||||||| |||||||||||| ||| |||||||| | ||    
T  1968505 atcaggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaagttaaaaagatatttcatagtgtccataatttaatattg 1968406  T
Q  336 aaaagtaaacattcccatcccttcccctc 364  Q
    ||||||||||  |||| |||||| |||||    
T  1968405 aaaagtaaaccctcccctccctttccctc 1968377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 151 - 345
Target Start/End: Complemental strand, 46007943 - 46007744
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||||| | ||||||||||| ||||||| |||||||    
T  46007943 agtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaata 46007849  T
Q  251 aattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaaaaa--tatttcatagtatccgtaatttaaaaatgaaaag 340  Q
    ||||||||| |||||| || ||        ||||||||||||||||||||||||||||||||||    ||||||  | || |||||||||||||||||||    
T  46007848 aattaagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaag 46007749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 388
Target Start/End: Complemental strand, 24565536 - 24565348
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt 297  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||  | || |||||||| || ||||        |||||| ||||||| ||||||||    
T  24565536 tttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagtattatatgtttgtttatcacgttaataagttaactt 24565439  T
Q  298 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||||  ||||    |||||| |||||||| |||||||||||||||||    
T  24565438 tttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacacc 24565348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 376
Target Start/End: Original strand, 6891405 - 6891590
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 290  Q
    ||||||||||| |||||||| |||  | |||||||||||||||||||||||||||||||||||||||| || |||        ||||| |||||| |||     
T  6891405 gtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattatt 6891504  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcca 376  Q
    |||| ||||| ||||| | |||||||| ||| ||||||||||| |||||  ||||  |||| || |||||||||||||||| ||||    
T  6891505 ttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaactatcca 6891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 36151637 - 36151773
Alignment:
Q  215 taaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaa 306  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||        |||||||||||||||||||||| |||||||||     
T  36151637 taaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaac-ttttaaaaat 36151735  T
Q  307 tatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
     ||||  |||| | | ||||||||||||||||||||||    
T  36151736 cattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 345
Target Start/End: Complemental strand, 47433919 - 47433754
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactata-taacatgtttttctaaaataaattaagtgtgattgaggtgttat-ttatc------ 279  Q
    |||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| || |||| | |||          
T  47433919 gggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttat 47433820  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||| ||| |||| ||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||    
T  47433819 atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaac 47433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 293 - 388
Target Start/End: Original strand, 6938394 - 6938489
Alignment:
Q  293 aactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| |||  |||| ||| |||||||| ||||| |||||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacacc 6938489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 16400871 - 16400987
Alignment:
Q  225 actatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatag 316  Q
    |||||| ||||||||||||||||||||||||| | ||||||| || ||||        ||||||||||||||||||||||||||||||| ||||||||||    
T  16400871 actatacaacatgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatag 16400970  T
Q  317 tatccgtaatttaaaaa 333  Q
    | ||| |||||||||||    
T  16400971 tgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 382
Target Start/End: Complemental strand, 17938318 - 17938115
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttcta-aaataaattaagtgtgattgaggtgttat--------ttat 278  Q
    |||||| ||| ||||| ||||| ||||||||||||  |||||||||||| ||||| |  ||||||||||||||||||||| || ||||        ||||    
T  17938318 gggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttat 17938219  T
Q  279 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 378  Q
    ||||||| ||| |||| ||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||  | || ||| ||||||||||||||  ||||||    
T  17938218 catgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccctccatc 17938119  T
Q  379 caaa 382  Q
    ||||    
T  17938118 caaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 339
Target Start/End: Original strand, 29798291 - 29798478
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||||||| ||| ||     |||| ||||  |||||||||||| |||||||||||||||||||||    |||    
T  29798291 gtgtgtttggattgatggtttaggaggggaagagagaggatag-----tttacttttattttttaaattacagactatataacatgtttttct----taa 29798381  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgtt-aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    || |||||||||||| || ||||        |||| ||||| || ||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  29798382 atcaagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 29798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 34110933 - 34111003
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  34110933 tttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagtaaac 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 44784038 - 44784190
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 291  Q
    |||| ||||| ||||||||||||  || |||||||| ||||||||||| |||||||||||||||||| || |||        ||||| | ||||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||  |||| |||||||||| |||| | ||||||||||||| |||||||||||    
T  44784138 taac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaac 44784190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 370
Target Start/End: Complemental strand, 21695129 - 21694910
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||| ||||||||||||||||     | || |||||||||| |||||  |||||||||| |||| ||||||  | ||||| | || |||    
T  21695129 gtgtgtttggattgggggtttatgaggggaag-----gaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaa-taa 21695036  T
Q  252 attaagtgtgattgaggtgttat-------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    ||||||||||||||| || ||||       ||||||| ||  ||| | || || |||||||  |||| ||||| ||||||||||||||| |||||||||     
T  21695035 attaagtgtgattgaagtattatatgatcattatcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaag 21694936  T
Q  345 cattcccatcccttcccctcctaaac 370  Q
    |  |||| ||||||||||||||||||    
T  21694935 ccctcccgtcccttcccctcctaaac 21694910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 369
Target Start/End: Original strand, 22659268 - 22659413
Alignment:
Q  224 gactatataacatgtttttctaaaataaattaagtgtgattgaggtg-ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccg 322  Q
    |||||||||||||||||| |||||| ||||||||||  ||| |  || || ||||| |||||||||| |||| |||| ||||||||||| || || || |    
T  22659268 gactatataacatgttttcctaaaagaaattaagtg--attaatatgattgtttattatgttaatatattaatttttaaaaaaatattttatggtgtctg 22659365  T
Q  323 taattt-aaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    |||||| |||||||||||||||||| || | ||||||  |||||||||    
T  22659366 taatttaaaaaatgaaaagtaaacactctcctcccttttcctcctaaa 22659413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 339
Target Start/End: Complemental strand, 2248042 - 2247854
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| |||| |||| || |||||||     |||| ||||| |||||||||||| || |||||||||||||||||||||| ||    
T  2248042 gtgtgtttggattgagggtttaggaggagaagtgaagggagag-----tttacttttcttttttaaattacaga-tatataacatgtttttctaaaa-aa 2247950  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    | || |||||||||| || |||        |||||||| |||||| |||||  |||||| ||| |||| ||| | |||||||||||||||||||||    
T  2247949 aatatgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 31348494 - 31348563
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||| || |||||||||||||    
T  31348494 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 370
Target Start/End: Complemental strand, 45132695 - 45132517
Alignment:
Q  198 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 289  Q
    |||||| ||||| ||||||||||||||||||||||| ||||      |||||||||||||||||||||| || ||||        ||||||| |||||||    
T  45132695 ggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaagtgtgattgaagtattatatgatcgtttatcattttaatat 45132602  T
Q  290 gttaactttttaaaaaatatttcatagtatccgtaatttaaaa-----atgaaaagtaaacattcccatcccttcccctcctaaac 370  Q
    |||||||||||| |||| ||||| |||| | | ||||||||||     |||||||||||||  |||| || ||||| |||||||||    
T  45132601 gttaacttttta-aaaacatttcgtagtgtacataatttaaaaagattatgaaaagtaaaccatcccctctcttccgctcctaaac 45132517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 28332850 - 28333003
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 291  Q
    |||| ||||| ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||||||| || |||        |||| || |||||||||     
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatgc 28332949  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||  ||||| |||||||||| |||| |  ||||||||||||  ||||||||||    
T  28332950 taatgttttagaaaatatttcgtagtgttggtaatttaaaaacaaaaagtaaac 28333003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 56135752 - 56135855
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| ||||||  ||||||||||||| || || ||| |||||||| ||||||||    
T  56135752 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataa 56135846  T
Q  252 attaagtgt 260  Q
    |||||||||    
T  56135847 attaagtgt 56135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 2917150 - 2917095
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | |||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattga 2917095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 36278376 - 36278450
Alignment:
Q  271 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||| |||| || |||||||||||| ||||| |||||    
T  36278376 ttatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaactaaac 36278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 1968532 - 1968601
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||||||||| |||||  | || ||||||||||||||||||  || |||||||||||||    
T  1968532 tccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacacc 1968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 27735816 - 27735749
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||||||||||||| |||||  || | ||||||||||||||||||  || |||||||||||    
T  27735816 tccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 387
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  324 aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||||||| |||||||||||  |||| ||||||||||||||||||  || ||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 2247972 - 2248050
Alignment:
Q  317 tatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaac 395  Q
    |||| |||||||||||| |||||||||||  |||| || |||| ||||||||||  || ||||||||||||||| ||||    
T  2247972 tatctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacaccattaaac 2248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 54935310 - 54935241
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||||||||||||||||||||||||||    
T  54935310 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 385
Target Start/End: Original strand, 55510202 - 55510407
Alignment:
Q  186 aggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------attta 277  Q
    ||||||| |||||  ||| ||||||||||||| |||  ||| || ||| |||||||| ||||||||||||||||||| ||| || ||        ||| |    
T  55510202 aggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattca 55510301  T
Q  278 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccat 377  Q
    |||||||  ||| || | |||||  ||||||||| ||||| | |||||||||||||| ||||||||||  || |||  ||| ||||| |||||| |||||    
T  55510302 tcatgttgttat-ttcaatttttttaaaatattttatagtgttcgtaatttaaaaat-aaaagtaaaccctcacatttctttccctcttaaactctccat 55510399  T
Q  378 ccaaacac 385  Q
    ||||||||    
T  55510400 ccaaacac 55510407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 45132668 - 45132737
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  || | || |||||||||||||||| || || ||||||||||    
T  45132668 tccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacacc 45132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 45911368 - 45911327
Alignment:
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  45911368 aaaaatattttatagtatccgtaatttaaaaaagaaaagtaa 45911327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 54576398 - 54576329
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||| |||||| ||||||||| |  |||| ||||||||||| ||||||  ||||||||||||||||    
T  54576398 tccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 54935137 - 54935069
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||  || |||||||||||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacc 54935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 31720028 - 31719966
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgt--ttttctaaaataaattaagtgtgattg 265  Q
    ||||| ||||||||||||  ||||||||||||||  |||| | ||||||||||||||||||||    
T  31720028 ttttcttttttaaattacaaactatataacatgttttttttttaaataaattaagtgtgattg 31719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 2247843 - 2247889
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgttt 240  Q
    |||||||| ||||||||||||||||||||||||  ||||| ||||||    
T  2247843 ggagggttcatttttcatttttaaattacggacattataaaatgttt 2247889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 6938322 - 6938360
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataa 233  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  6938322 gaggatttatttttcctttttaaattacggactatataa 6938360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 27735947 - 27735901
Alignment:
Q  196 agggtttatttttcatttttaaattacggactatataacatgttttt 242  Q
    |||||| ||||||||||||||||||||||||  ||||| ||||||||    
T  27735947 agggttcatttttcatttttaaattacggacactataaaatgttttt 27735901  T

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Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 47433885 - 47433951
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| |||||||||||  |||  ||||||||||||||||||  || | |||||||||||    
T  47433885 gtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacacc 47433951  T

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Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 47846233 - 47846303
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||||||||||  ||||||||||  |||||||||||| |||| |||||  || ||||||||||||| ||||    
T  47846233 taatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacaccttaaa 47846303  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 49735471 - 49735540
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| | ||||||||||||||||||||||    
T  49735471 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcacttttcatttttaaattacggac 49735540  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 22921033 - 22921094
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaat-taagtgtgattga 266  Q
    |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||||||||||||    
T  22921033 tttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattga 22921094  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 22970766 - 22970705
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaat-taagtgtgattga 266  Q
    |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||||||||||||    
T  22970766 tttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattga 22970705  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 34995108 - 34995157
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    ||||||||||||| || || | | ||||||||||||||||||||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgt 34995157  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 37761555 - 37761467
Alignment:
Q  300 taaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| ||  | | |||||||||||||| |||||| |||  | || ||| ||| ||||||||||| || |||||||||||||    
T  37761555 taaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacacacc 37761467  T

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Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 189 - 386
Target Start/End: Original strand, 8529834 - 8530039
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 280  Q
    |||| |||||||||| ||||| ||||||||||||  |||||||||||||||||| | ||||||||||||||||||||| || ||||        ||| ||    
T  8529834 ggaggggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttacca 8529933  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 380  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||| | ||||||    
T  8529934 tgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatcca 8530033  T
Q  381 aacaca 386  Q
    ||||||    
T  8530034 aacaca 8530039  T

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Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 196 - 388
Target Start/End: Complemental strand, 40095136 - 40094935
Alignment:
Q  196 agggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 286  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||        ||||||||||||    
T  40095136 agggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaa 40095037  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    | ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||  |||| | ||||||||||||||||  ||||||||||||||    
T  40095036 tttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacaca 40094937  T
Q  387 cc 388  Q
    ||    
T  40094936 cc 40094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 152 - 388
Target Start/End: Original strand, 30010335 - 30010574
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     | |||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  30010335 gtgtgtttggattgagggtttaggaggggaagggaggggag-----gatttacttttcttgtttaaattacggactatataacatgtttttctaaaataa 30010429  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||| |||| || ||||        |||| ||||||||||||||||| ||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  30010430 attaagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaa 30010529  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  |||| ||||||||||| ||||||  ||||||||||||||||    
T  30010530 accctcccctcccttccccttctaaaccctccatccaaacacacc 30010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 152 - 393
Target Start/End: Original strand, 12234013 - 12234257
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||| ||     || ||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12234013 gtgtgtttggattgagggtttaggaggggaagggagggtag-----ggcttaattttcttttttaaattacggactatataacatgtttttctaaaataa 12234107  T
Q  252 attaagtgtgattgaggtgttattt--------atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    || |||||||||||| || | || |        || ||||||||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||| |||    
T  12234108 atcaagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaa 12234207  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||  |||| ||||||||||||||||||  |||||||||||||||||||||    
T  12234208 accctcccctcccttcccctcctaaaccctccatccaaacacaccataaa 12234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 151 - 393
Target Start/End: Complemental strand, 38510136 - 38509891
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    ||||||||||||||   |||||| ||||||||| ||||||||     |||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  38510136 agtgtgtttggattaagggtttaggaggggaagggaggggag-----ggtttagttttcttttttaaactacggactatataacatgtttttctaaaata 38510042  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||| |||||||||||| || ||||        ||||| |||||| ||||||| ||||||||| | |||||||||| |||||||||||||||||||||||     
T  38510041 aatcaagtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtg 38509942  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||  |||  ||||||||||||||||||  || ||||||||||||| ||||    
T  38509941 aaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaaa 38509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 152 - 393
Target Start/End: Original strand, 41498407 - 41498652
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| ||||||||||| | ||||| ||||||| |||||||  ||||    
T  41498407 gtgtgtttggattgagggtttaggaggggaagtgaggggag-----ggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataa 41498501  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
     |||||||||||||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  41498502 gttaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 41498601  T
Q  344 acattcccatccctt-cccctcctaaactttccatccaaacacaccataaa 393  Q
    |   |||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  41498602 atcctcccctcccttacccctcctaaactctccatccaaacacaccctaaa 41498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 156 - 388
Target Start/End: Complemental strand, 2859169 - 2858934
Alignment:
Q  156 gtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatta 255  Q
    |||||||||| ||||||| ||||||||| ||||||||     |||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggag-----ggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaatta 2859075  T
Q  256 agtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacat 347  Q
    ||||||||||| || |||        ||||| |||| | ||||||||||||||||| || |||||||||  || |||||||| |||||||||||||||      
T  2859074 agtgtgattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccc 2858975  T
Q  348 tcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| |||||| |||||||||||  ||||||||||||||||    
T  2858974 tcccctccctttccctcctaaaccctccatccaaacacacc 2858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 152 - 342
Target Start/End: Complemental strand, 32951559 - 32951366
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||   ||||| ||| ||||| |||||||||     ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  32951559 gtgtgtttggattgagagtttaggagaggaagggaggggaga-----gtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataa 32951465  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||||||||||||||| || |||        |||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||    
T  32951464 attaagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 152 - 388
Target Start/End: Complemental strand, 35349703 - 35349468
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||||||||   |||||||||||||||| ||||||||     |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  35349703 gtgtgtttggattaagggtttatgaggggaagggaggggag-----ggtttacttttcgtttttaaattacggactatataacatttttttctaaaataa 35349609  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    | |||| || ||||| || ||||        ||||||||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||||||||    
T  35349608 actaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaa 35349511  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  ||||  ||| ||||||| |||||  ||||||||||||||||    
T  35349510 accctccc--cccctcccctcttaaaccctccatccaaacacacc 35349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 189 - 338
Target Start/End: Complemental strand, 50744490 - 50744332
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 280  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||        |||||||    
T  50744490 ggaggggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatca 50744391  T
Q  281 tgttaatatgttaact-ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||    
T  50744390 tgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 153 - 344
Target Start/End: Original strand, 51597672 - 51597866
Alignment:
Q  153 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 252  Q
    |||||||||||||  |||||||||  ||||| ||||||||||     |||| ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagag-----tttacttttcttttttaaatcacggactatataacatgtttttttaaaataaa 51597766  T
Q  253 ttaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    |||||||||||||| || |||        |||||||| |||||||||||||||||||||||  |||||||||| | | |||||||||| |||||||||||    
T  51597767 ttaagtgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 345
Target Start/End: Original strand, 10391912 - 10392072
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 285  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | || |||        ||||||||||||    
T  10391912 ggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcatgtta 10392011  T
Q  286 atatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||| |||||| |||| ||| | |  |||||||||||| |||||||||||    
T  10392012 atatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaac 10392072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 49946791 - 49946633
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 286  Q
    ||||||||| ||||| | ||||||  |  ||||||||||||||||||| ||||||||||||| ||||||||| || ||||        ||||||||||||    
T  49946791 gagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaa 49946692  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||    
T  49946691 tatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaac 49946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 6563614 - 6563775
Alignment:
Q  190 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta-------tttatcatg 282  Q
    |||||||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||||||| |||| |||||  | |||       |||||||||    
T  6563614 gagaggagggtttatttt-cttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatctttatcatg 6563712  T
Q  283 ttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  6563713 ttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 6563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 336
Target Start/End: Complemental strand, 45585884 - 45585739
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 290  Q
    ||||| ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||| || ||  ||        |||||||||||||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatga 336  Q
    ||||||||| |||||| |||| ||||||||  ||||||||||||||    
T  45585784 ttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 43552108 - 43551993
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||||||||||||||||| ||||||||     ||||||||||||||||||| |||||  || ||||| ||| || ||||||| ||    
T  43552108 tttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaacctt 43552013  T
Q  374 ccatccaaacacaccataaa 393  Q
    ||||||||||||||| ||||    
T  43552012 ccatccaaacacaccctaaa 43551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 26324017 - 26324112
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa 247  Q
    ||||||||||||||  |||||| ||||||||| |||||||| |||||||||  ||||| ||||||||||||  |||||||||||||||||||||||    
T  26324017 gtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 20576247 - 20576136
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    |||||||||||||||| |||||| ||||||||| ||||||  || ||||||||||||||||||||  |||||  |||| ||||||||||||||||||  |    
T  20576247 tttatcatgttaatatattaactctttaaaaaacatttca--gtgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccct 20576150  T
Q  374 ccatccaaacacac 387  Q
    | ||||||||||||    
T  20576149 ctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 274 - 387
Target Start/End: Original strand, 7444623 - 7444736
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||| ||||||||||||||||||||||||||  |||| ||||| |||||||||| |||||||||| |||||  |||| || |||||| | ||||||| |    
T  7444623 tttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactct 7444722  T
Q  374 ccatccaaacacac 387  Q
     |||||||||||||    
T  7444723 tcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 359
Target Start/End: Complemental strand, 26941036 - 26940874
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaact 296  Q
    ||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| || |||        ||||  ||||||||| |||||||    
T  26941036 ttttcttttttaaaatacggattctataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaact 26940937  T
Q  297 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 359  Q
    ||| || |||||||||||||| ||  |||||||||||| |||||| |||  ||||||| ||||    
T  26940936 tttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccctcccatctcttc 26940874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 231 - 345
Target Start/End: Complemental strand, 36285741 - 36285619
Alignment:
Q  231 taacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccg 322  Q
    |||||||||||| ||||||| || |||||||||||| || ||||        ||||||||||||||||||||||||||||||||||||| ||||| | ||    
T  36285741 taacatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcg 36285642  T
Q  323 taatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||| || |||||    
T  36285641 taatttaaaaatgataaataaac 36285619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 28770852 - 28770969
Alignment:
Q  275 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 374  Q
    |||||||||||||||||||| |||||| |||| |||||||| | |  ||||||||||||| |||| |||||  |||  ||| || ||||||||||| |||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  375 catccaaacacaccataaaa 394  Q
    |||||||||||||| |||||    
T  28770950 catccaaacacaccctaaaa 28770969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 32951491 - 32951566
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    ||||||||||||||| |||||||||||  |||| |||||||| |||||||||| || ||||||||||||| |||||    
T  32951491 tccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaaaa 32951566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 40964726 - 40964798
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||| |||||||||||||||||| |||| ||||||| |  || |||||||||||||||||||||||||||    
T  40964726 tttatcacgttaatatgttaacttttaaaaaaaatatttgacggtgtccgtaatttaaaaatgaaaagtaaac 40964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 44211097 - 44211037
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  44211097 tttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattga 44211037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 2470944 - 2470867
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||| |||||| ||||| |||||||||||   |||||||||||||||||||||||||| | ||| |||||||||    
T  2470944 ggaggggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattga 2470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 345
Target Start/End: Original strand, 41676363 - 41676480
Alignment:
Q  238 tttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt--tttaaaaaatatttcatagtatccgtaatt 327  Q
    ||||||||||||||||||||||||||||  || ||||        |||||||||||||||||||| ||     |||||| |||| ||||| |||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  328 taaaaatgaaaagtaaac 345  Q
    ||||||||||||||||||    
T  41676463 taaaaatgaaaagtaaac 41676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 43553129 - 43553068
Alignment:
Q  200 tttatttttcatttttaaatt-acggactatataacatgtttttctaaaataaattaagtgt 260  Q
    |||| |||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||    
T  43553129 tttacttttcatttttaaatttacggattatataacttgtttctctaaaataaattaagtgt 43553068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 2859105 - 2859169
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaac 383  Q
    |||||||||||||||  ||||||||||  |||| |||||||||||||||||| ||| ||||||||    
T  2859105 tccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 23536844 - 23536777
Alignment:
Q  326 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||||||  ||||| |||||| |||||||||||| |||||||||   |||||||||||||||||||||    
T  23536844 tttaaaatagaaaattaaacactcccatcccttctcctcctaaatcctccatccaaacacaccataaa 23536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 35349635 - 35349709
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||| |||||  |  ||||||||||||| ||||    
T  35349635 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaa 35349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 30010403 - 30010334
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||||    
T  30010403 tccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacacc 30010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 41498471 - 41498406
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacc 41498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 2470819 - 2470727
Alignment:
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||||| |||| ||||| | ||||||||||||||| |||  ||||  |||  || |||||||||||||||  |||||||||||||||| ||||    
T  2470819 aaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaaa 2470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 2506689 - 2506781
Alignment:
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||| ||||| ||| |||| |||||||||||| ||||| |||    || | |||||||| || ||||||| ||||||||||||||||    
T  2506689 tttttaaaaattattttataatatctgtaatttaaaaaagaaaactaagtcatctcctcccttcctcttctaaactctccatccaaacacacc 2506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 41676485 - 41676437
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgttttt 242  Q
    |||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  41676485 ggagggtttacttttcatttttaaattacggacactataaaatgttttt 41676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    |||||||||||  |||||||| |  |||| ||||||||||||||||||  ||||||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 10391943 - 10391893
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    |||||||||||||||||||||||||||  |||| ||  |||||||||||||    
T  10391943 tccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaa 10391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 12234081 - 12233999
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaaccat 401  Q
    ||||||||||||||| ||||| ||| |  | || ||||||||||||||||||  || ||||||||||||| | ||| ||||||    
T  12234081 tccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaaaaaaccat 12233999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 12234251 - 12234182
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||| ||||||||||||||||||||||    
T  12234251 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 38509928 - 38509966
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  38509928 gggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 1085677 - 1085628
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    ||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  1085677 tttttaaattacgaaccatgtaaaatgtttttttaaaataaattaagtgt 1085628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 20607410 - 20607459
Alignment:
Q  339 agtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  20607410 agtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 20607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 25268437 - 25268510
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataa 392  Q
    ||||||||||||||| | |||||||||  |||| || |||||||| ||||||  |||||||||| | |||||||    
T  25268437 tccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaatataccataa 25268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 388
Target Start/End: Complemental strand, 40709391 - 40709294
Alignment:
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| ||| |||||| ||||| ||| ||| ||||||||||||| |||||||||    |||  |||||||||||| ||||| ||  |||||||||||||    
T  40709391 ttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacacc 40709294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 49946629 - 49946682
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaa 248  Q
    |||||||||||| |||||||||||||||||||  ||||| || ||||| |||||    
T  49946629 gagggtttatttgtcatttttaaattacggacactataaaatatttttttaaaa 49946682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 7444549 - 7444481
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||| ||||  || |||| |||||||    
T  7444549 tccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 35349504 - 35349536
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||| ||||||||||||||||||||||    
T  35349504 ggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 38510067 - 38510135
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||| |||||||| ||||| |||||  |||| ||||||||||||||||||  |  ||||||||||||    
T  38510067 tccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 40094973 - 40095005
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||| ||||||||||||||||||||||    
T  40094973 ggagggtttacttttcatttttaaattacggac 40095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 43552037 - 43552065
Alignment:
Q  195 gagggtttatttttcatttttaaattacg 223  Q
    |||||||||||||||||||||||||||||    
T  43552037 gagggtttatttttcatttttaaattacg 43552065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 49832583 - 49832659
Alignment:
Q  190 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||| | ||| ||||| |||||||||||| ||  ||||||  |||||||  |||||||| |||||||||||||    
T  49832583 gagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattga 49832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 152 - 388
Target Start/End: Original strand, 13634714 - 13634953
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13634714 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaataacggactatataacatgtttttctaaaataa 13634808  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||| ||||||||||  | ||||        |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  13634809 attatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaa 13634908  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
     |  |||| ||||||||||||||||||  || |||||||||||||    
T  13634909 cccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 393
Target Start/End: Original strand, 7544161 - 7544383
Alignment:
Q  179 ggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---- 274  Q
    ||||| || ||||| |||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||        
T  7544161 ggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatga 7544260  T
Q  275 ----ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 370  Q
        |||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||  |||| | ||||||||||||||||    
T  7544261 ttgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaac 7544360  T
Q  371 tttccatccaaacacaccataaa 393  Q
      |||||||||||||||| ||||    
T  7544361 cctccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 188 - 393
Target Start/End: Original strand, 10650463 - 10650661
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttatcatgttaat 287  Q
    ||||| ||||| |||| |||| |||||||||||||||||  ||| | |||||||||||||||||||||||||||||||| ||       |||||| ||||    
T  10650463 gggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaagt-------atcatggtaat 10650555  T
Q  288 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||| | ||||||||||||| |||||||| ||||||||||||    
T  10650556 atgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttcaatccaaacacac 10650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 183 - 388
Target Start/End: Original strand, 26414922 - 26415136
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------t 274  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||        |    
T  26414922 gagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgt 26415021  T
Q  275 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaacttt 373  Q
    ||||||||||||||||||||||||||| |||| |||||||||| || |||| |||||||||||||||||||  |||| ||| || |||||| |||||  |    
T  26415022 ttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccct 26415121  T
Q  374 ccatccaaacacacc 388  Q
    |||||||||||||||    
T  26415122 ccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 152 - 388
Target Start/End: Original strand, 16938482 - 16938721
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  16938482 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataa 16938576  T
Q  252 attaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||||||||  | ||        |||||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||  |||    
T  16938577 attaagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaa 16938676  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||  |||| ||| |||| |||||||||  ||||||||||||||||    
T  16938677 accctcccctccattcctctcctaaaccctccatccaaacacacc 16938721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 216 - 388
Target Start/End: Complemental strand, 8503017 - 8502837
Alignment:
Q  216 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattta--------tcatgttaatatgttaactttttaaaaaat 307  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||        |||| ||||| |||||||||||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  308 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||| | ||||||||||||||||||||||| |||  |||||||| ||||| || |||||  ||||||||||||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacacc 8502837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 385
Target Start/End: Original strand, 36363067 - 36363271
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 280  Q
    |||| |||| ||||| ||||| | |||||| |||| ||||||||||||||||||||||||||||| |||||| ||||| || ||||        ||||||    
T  36363067 ggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatca 36363166  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 380  Q
    || ||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |||  || | ||||||||||||||||||  ||||||||    
T  36363167 tgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatcca 36363266  T
Q  381 aacac 385  Q
    |||||    
T  36363267 aacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 195 - 388
Target Start/End: Complemental strand, 28279680 - 28279478
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 285  Q
    ||||||||| ||||| ||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||| || ||||        |||||||||||    
T  28279680 gagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaagtgtgattgaagtattatatgatcatttatcatgtta 28279581  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||  ||| |  || ||||| ||| ||||  |||||||||||||    
T  28279580 atatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccctccatccaaacac 28279481  T
Q  386 acc 388  Q
    |||    
T  28279480 acc 28279478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 189 - 338
Target Start/End: Original strand, 9856915 - 9857072
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 280  Q
    |||| |||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||        ||||| |    
T  9856915 ggaggggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttatta 9857014  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  9857015 tgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 188 - 388
Target Start/End: Original strand, 37606929 - 37607136
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    |||||| ||| ||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||||||  ||||||||| || ||||        |||||    
T  37606929 gggagatgagagtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatc 37607027  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |||||||    
T  37607028 atgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatcc 37607127  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  37607128 aaacacacc 37607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 194 - 345
Target Start/End: Complemental strand, 4373770 - 4373611
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 285  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||  | ||||        |||||||||||    
T  4373770 ggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgatcatttatcatgtta 4373671  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  4373670 atatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaac 4373611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 195 - 393
Target Start/End: Original strand, 10476067 - 10476275
Alignment:
Q  195 gagggtttatttttcatttttaaa-ttacggactatata-acatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtt 284  Q
    ||||||||| ||||| |||||||| |||| || |||||| |||||||||||||||||||||||||||||||||| || ||||        ||||||| ||    
T  10476067 gagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaattaagtgtgattgaagtattatataatcgtttatcatctt 10476166  T
Q  285 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    ||||||||   ||||| | ||||||||||||||   |||||||||||||| | ||||||||| |||| ||||||||||||||||||  ||||||||||||    
T  10476167 aatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaaca 10476266  T
Q  385 caccataaa 393  Q
    |||| ||||    
T  10476267 caccctaaa 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 387
Target Start/End: Complemental strand, 9798810 - 9798615
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 291  Q
    |||| ||||| |||| ||||||| || |||||||||||||||||| ||||||||||| ||||||||| || ||||        || ||||||||| || |    
T  9798810 tttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaatat 9798711  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||  |||||||||   |||||||||||||||    
T  9798710 tgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 345
Target Start/End: Complemental strand, 36392388 - 36392195
Alignment:
Q  154 gtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 253  Q
    ||||||||||||  |||||| ||||||||||||| || | |     ||||| |||| ||||||||||||||||||||||| || |||| |||||||| ||    
T  36392388 gtgtttggattgagggtttaggaggggaagagagcggtgtg-----tttatatttcgtttttaaattacggactatataatatatttt-ctaaaatagat 36392295  T
Q  254 taagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||    
T  36392294 taagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaac 36392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 10072845 - 10072692
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 291  Q
    |||| ||||| |||||||||||| |||  |||||||||||||||||||||||||||||| ||||||| || ||||        |||||||||||||||||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 10072746  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||||||||  |  |||||||| |||||||||||||    
T  10072745 taactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaac 10072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 188 - 388
Target Start/End: Original strand, 37779139 - 37779345
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    |||||| ||| ||||| ||||| ||||||||||| ||||||| ||| |||||||| ||||||||||||  ||||||||| || ||||        |||||    
T  37779139 gggagatgagagtttacttttcgtttttaaattaaggactat-taa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatc 37779236  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |||||||    
T  37779237 atgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatcc 37779336  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  37779337 aaacacacc 37779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 1657955 - 1658055
Alignment:
Q  288 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  388 c 388  Q
    |    
T  1658055 c 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 14245204 - 14245090
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||| ||||||||||   |||| ||||||||||||||||||  |    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  374 ccatccaaacacacc 388  Q
    | |||||||||||||    
T  14245104 caatccaaacacacc 14245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 388
Target Start/End: Original strand, 37551453 - 37551647
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 290  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| |||||||||| || ||||        ||||||||||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  ||||||||||||||||    
T  37551552 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacacc 37551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 388
Target Start/End: Original strand, 37654283 - 37654477
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 290  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| |||||||||| || ||||        ||||||||||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  ||||||||||||||||    
T  37654382 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacacc 37654477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 339
Target Start/End: Complemental strand, 20147088 - 20146917
Alignment:
Q  185 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgt----------gattgaggtgttat 274  Q
    |||||||  |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||          ||||||  | ||||    
T  20147088 gaggggaagggagggtttacttttcatttttaaattacggattatata-catgtttttctaaaataaattaagtgtaattaagtgtgattgaaatattat 20146990  T
Q  275 --------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
            |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  20146989 atgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 344
Target Start/End: Complemental strand, 16502033 - 16501836
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaata 250  Q
    ||||||||||||||  |||||| ||||| ||||||||||    |||   ||| ||||  |||||||||||||||||||||| ||| ||||| ||||||||    
T  16502033 gtgtgtttggattgagggtttaggagggaaagagagggg----gagaaattacttttattttttaaattacggactatatatcatattttttctaaaata 16501938  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||| |||||||||| | || ||||        |||| |||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||| ||    
T  16501937 aatcaagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaacta 16501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 345
Target Start/End: Complemental strand, 2550592 - 2550397
Alignment:
Q  153 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 252  Q
    |||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||  | |||||||||||||||||||||||| ||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaagattcggactatataacatgtttttctataataaa 2550498  T
Q  253 ttaagtgtgattgaggtgtta--------tttatcatgttaatatgttaact-ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||| |||||||||| || |||        ||||||||| || ||| |||| | ||| |||||| || ||||||| || ||||||||||||||||||||||    
T  2550497 ttacgtgtgattgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaa 2550399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 22022907 - 22022962
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22022907 tttttaaattacggactatataacatatttttctaaaataaattaagtgtgattga 22022962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 20513561 - 20513491
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||||||    
T  20513561 tttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaagtaaa 20513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 43535 - 43607
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaa-tttaaaaatgaaaagtaaac 345  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  43535 tttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagtaaac 43607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 11756917 - 11756987
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 264  Q
    |||| |||| |||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  11756917 ggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgtgatt 11756987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 17024393 - 17024270
Alignment:
Q  229 tataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatc 320  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||        || ||||||||||||| |||||||||||| || |||||||| | ||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtc 17024294  T
Q  321 cgtaatttaaaaatgaaaagtaaa 344  Q
     | |||||||||||||||||||||    
T  17024293 tgcaatttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 22023495 - 22023568
Alignment:
Q  274 tttatcatgttaatatgttaac-tttttaaaaaatatttcat-agtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||| |||||||||||||||    
T  22023495 tttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaac 22023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 32727893 - 32727822
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||   |||||||||||||||||||| || ||||||||||||||| ||| ||||||    
T  32727893 tttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaac 32727822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 42681510 - 42681618
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaa 302  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | || ||        ||||||||||||| ||| |||| |||||||    
T  42681510 ttttttaattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaa 42681609  T
Q  303 aaaatattt 311  Q
    |||||||||    
T  42681610 aaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 14245202 - 14245288
Alignment:
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||| |||||| ||| |||||||||||||||||||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaa 256  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 14681520 - 14681581
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||| |||||||||||| || |||||||||||||||| ||||||||||||| |||||||||    
T  14681520 ttttcttttttaaattacagattatataacatgtttttttaaaataaattaaatgtgattga 14681581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 40815300 - 40815408
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||||||||| || |||| ||||||||| || |  ||||||   |||| ||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  40815300 gtgtgtttggattgaagatttaggaggggaagggaag--agagga---tttacttttcttttttaaattacagactatataacatgtttttataaaataa 40815394  T
Q  252 attaagtgtgattga 266  Q
    |  ||||||||||||    
T  40815395 a-aaagtgtgattga 40815408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 11757070 - 11757144
Alignment:
Q  313 atagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||| ||||||||||||||||||||  |||||  |||| |||||||||||| |||||  |||||||||||||||    
T  11757070 atagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 39966150 - 39966084
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| | |||||||||||  ||||||||    
T  39966150 tttattttttatttttaaattacggattatataacatattttttttaaataaattaaacgtgattga 39966084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 13634782 - 13634713
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  13634782 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 17780340 - 17780279
Alignment:
Q  285 aatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||||||    
T  17780340 aatatgttaactttttaaaaaaacattttataatatccgtaatttaaaactgaaaagtaaac 17780279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 26414964 - 26414895
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||  || |||||||||||||    
T  26414964 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacacc 26414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 339
Target Start/End: Original strand, 4423336 - 4423404
Alignment:
Q  271 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    |||||||| | ||||||||| ||| |||| ||||||||||||||| | | |||||||||||||||||||    
T  4423336 ttatttattacgttaatatgctaaattttaaaaaaatatttcataatgttcgtaatttaaaaatgaaaa 4423404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 10650517 - 10650427
Alignment:
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccc--ttcccctcctaaactttccatccaaacacaccat 390  Q
    ||||| |||||||||| |||||||||||||||| |||||||||   |||| ||||  |||||||||||||   ||||||||||| ||||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcaccat 10650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 34980879 - 34980812
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| |||||| |||  | || |||||||||||||||||| ||| |||||||||||||    
T  34980879 cgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 1658054 - 1657969
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt 242  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  1658054 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttacttttcatttttaaattacggacactataaaatgttttt 1657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 14245287 - 14245218
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||||||||||||||||||||    
T  14245287 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 11419302 - 11419237
Alignment:
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||| ||||||| ||||| |||| ||| | ||| |||||| ||||||||||||||||    
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaac 11419237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 2556167 - 2556215
Alignment:
Q  297 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  2556167 ttttaaaaaatattttatatcatccataatttaaaaatgaaaagtaaac 2556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 34980813 - 34980916
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||||||||| ||||||| ||||||||| ||||| ||     |||| | |||| |||||||||||||| || |  ||| || ||||| ||||||||    
T  34980813 gtgtgtttggattgaaggtttaggaggggaagggagggaag-----ggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataa 34980907  T
Q  252 attaagtgt 260  Q
    |||||||||    
T  34980908 attaagtgt 34980916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 43410 - 43481
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaataaattaagt 258  Q
    |||||| |||| |||| || || ||||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  43410 gggagatgaggatttacttctcttttttaaattagggattatataacatgttttttttaaaataaattaagt 43481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  327 ttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 14684692 - 14684614
Alignment:
Q  190 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttcta--aaataaattaagtgtgattga 266  Q
    |||||||||| ||| ||||| ||||| |||||||| | |||||| |||||||| |   |||||||||||||||||||||    
T  14684692 gagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaataaattaagtgtgattga 14684614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 29002322 - 29002251
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||   |||  |||||| |||| ||||| | | |||||||||||||||||||||||    
T  29002322 tttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaac 29002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 8551659 - 8551621
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagagggg 190  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  8551659 gtgtgtttggattgaaggtttaggaggggaagagagggg 8551621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 10476090 - 10476028
Alignment:
Q  326 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||| |||||||||||  || ||||||||||||||||||||  || || ||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacacc 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 12600745 - 12600703
Alignment:
Q  150 aagtgtgtttggattggaggtttatgaggggaagagaggggag 192  Q
    |||||||||||||||  ||||||| ||||||||||||||||||    
T  12600745 aagtgtgtttggatttaaggtttaggaggggaagagaggggag 12600703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 33744260 - 33744190
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||||||||| |||||||||||  |||| ||||||| || ||| |||  |||||||||||||||| ||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaaa 33744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 40815365 - 40815299
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| ||||||||||   || | |||||||||||||||||  ||| |||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacacc 40815299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 16938550 - 16938481
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||| ||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  16938550 tccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 16938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 13298296 - 13298376
Alignment:
Q  184 agaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 264  Q
    ||||||||| ||||   ||| ||||| |||||||||| ||||| |||||| | ||||||  || |||||||||||||||||    
T  13298296 agaggggaggggagaacttacttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagtgtgatt 13298376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 188 - 384
Target Start/End: Complemental strand, 31543282 - 31543078
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    ||||| |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||        ||||     
T  31543282 gggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgaccgtttatg 31543183  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||||||| |||||  |||||||    
T  31543182 atgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatcc 31543083  T
Q  380 aaaca 384  Q
    |||||    
T  31543082 aaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 183 - 382
Target Start/End: Complemental strand, 11575621 - 11575415
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-------- 274  Q
    |||| ||||| |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| | || ||||            
T  11575621 gagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgt 11575522  T
Q  275 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 374  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||  |||| |||||||| ||||||||   ||    
T  11575521 ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctccc-tcccttcctctcctaaatcctc 11575423  T
Q  375 catccaaa 382  Q
    ||||||||    
T  11575422 catccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 194 - 387
Target Start/End: Original strand, 16652989 - 16653190
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 285  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||        |||||  |||||    
T  16652989 ggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtta 16653088  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    ||||||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||  || | |||||||||||| |||||  | |||||||||||    
T  16653089 atatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacac 16653188  T
Q  386 ac 387  Q
    ||    
T  16653189 ac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 189 - 388
Target Start/End: Original strand, 11785561 - 11785768
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 280  Q
    |||| |||| ||||| ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| || |||||| || ||||        ||||||    
T  11785561 ggaggggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatca 11785660  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 380  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||  ||||  |||| || ||| |||||||||||  ||||||||    
T  11785661 tgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatcca 11785760  T
Q  381 aacacacc 388  Q
    ||||||||    
T  11785761 aacacacc 11785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 1281184 - 1281341
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 286  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| || ||||        |||| |||||||    
T  1281184 gagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgtttattatgttaa 1281283  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1281284 tatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaa 1281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 168 - 388
Target Start/End: Original strand, 31738442 - 31738665
Alignment:
Q  168 ggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgag 267  Q
    |||||| |||||||||||| |||||||     ||| |||||  |||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||     
T  31738442 ggtttaggaggggaagagaagggagag-----ttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaa 31738536  T
Q  268 gtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 359  Q
    || ||||        |||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||  |||||  |||| |  ||||    
T  31738537 gtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttc 31738636  T
Q  360 ccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||  ||||||||||||||||    
T  31738637 ccctcctaaaccctccatccaaacacacc 31738665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 345
Target Start/End: Complemental strand, 1027067 - 1026894
Alignment:
Q  179 ggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---- 274  Q
    ||||| || ||||| | |||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||        
T  1027067 ggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagtatgattgaagtattatatga 1026969  T
Q  275 ----ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
        ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||    
T  1026968 tcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaac 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 185 - 345
Target Start/End: Complemental strand, 7503167 - 7502999
Alignment:
Q  185 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------ttt 276  Q
    |||||||| |||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | || |||        |||    
T  7503167 gaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgattgttt 7503068  T
Q  277 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||||||||||||||| |||| |||||||||| |  |||||||||||||| |||| ||||    
T  7503067 atcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaac 7502999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 152 - 386
Target Start/End: Complemental strand, 30479958 - 30479721
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||||||| ||||      |||| |||||||||| ||||| |||||||| ||| ||||||||  ||||||||||||||||||    
T  30479958 gtgtgtttggattgagggtttatgagaggaat-----ggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataa 30479864  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    || |||||||||||| || ||||        ||||||  |||||||||||||||||||||| | |||||||||| || |||||||||||||||||||| |    
T  30479863 atcaagtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtga 30479764  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||  |||| ||| | |||||||||||   ||||||||||||||    
T  30479763 actctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 199 - 394
Target Start/End: Complemental strand, 3727054 - 3726859
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttatcatgttaatatgttaacttt 298  Q
    ||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||  | |||| |  |   |||  ||||||||| |    
T  3727054 gtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcatgttaactat 3726955  T
Q  299 ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    |||||||| ||| ||| || ||||||||||||||||||||| |||||  |||  ||||||||||||||||||  |||||||||||||||| |||||    
T  3726954 ttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccctaaaa 3726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 345
Target Start/End: Complemental strand, 29358547 - 29358385
Alignment:
Q  191 agaggagggttta-tttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcat 281  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||| || |||        ||||| ||    
T  29358547 agaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataat 29358448  T
Q  282 gttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29358447 gttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaac 29358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 351
Target Start/End: Original strand, 30664407 - 30664566
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 291  Q
    |||||||||| |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||| || ||||        ||||||| |||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 351  Q
    ||||||||||||||||||||  || | |||||||||||||| |||||| |||||||||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaacattccc 30664566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 188 - 346
Target Start/End: Original strand, 7979174 - 7979340
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatc 279  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||         |||||||||    
T  7979174 gggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattatatgattatttatc 7979273  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaaca 346  Q
    ||||||||| |||||  |||||| ||| ||||||  || ||||||||||||||||||||||||||||    
T  7979274 atgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaaca 7979340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 280 - 388
Target Start/End: Original strand, 34634277 - 34634385
Alignment:
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| | |||  || ||||||||||||||||||||| |||||||    
T  34634277 atgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatcc 34634376  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  34634377 aaacacacc 34634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 384
Target Start/End: Original strand, 36308876 - 36309081
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttc-taaaataaattaagtgtgattgaggtgttat--------ttat 278  Q
    ||||| |||||||| ||||||| || ||||| ||  |||||||||||||||||||  ||||||||| ||||||||||||| || ||||        ||||    
T  36308876 gggaggggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttat 36308975  T
Q  279 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 378  Q
    |||||||||||||| |||||| |||| |||||||| | | | ||||||||||| |||||||||||||  |||| ||||||||||||||||||  ||||||    
T  36308976 catgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatc 36309075  T
Q  379 caaaca 384  Q
    ||||||    
T  36309076 caaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 6315119 - 6315255
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaa 302  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||        ||||||| ||||||||||||| ||||| |    
T  6315119 ttttttaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaattttttta 6315218  T
Q  303 aaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    |||| |||||||||| |||||| ||||||||||||||    
T  6315219 aaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 37923280 - 37923123
Alignment:
Q  196 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaat 287  Q
    |||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |  | ||||        |||||||||||||    
T  37923280 agggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaat 37923181  T
Q  288 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    || |||||| ||||||||| |||||||||| | | |||||||||||||||||||||||    
T  37923180 attttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 37923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 192 - 387
Target Start/End: Original strand, 11033455 - 11033659
Alignment:
Q  192 gaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgt 283  Q
    |||| ||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||    |||        ||||||||||    
T  11033455 gaggggggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgtttatcatgt 11033554  T
Q  284 taatatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 382  Q
    ||||||||||| ||||| |||||| |||||||| ||| | |||||||||| |||||||||||  ||| | ||||||| ||||||||||  |||||| |||    
T  11033555 taatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatcttctcctcccttctcctcctaaaccctccatctaaa 11033654  T
Q  383 cacac 387  Q
     ||||    
T  11033655 gacac 11033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 339
Target Start/End: Complemental strand, 9718720 - 9718530
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| |||| |||| ||||||| ||     |||| ||||| ||||||||||| | |||||||||||| ||||||||||||      
T  9718720 gtgtgtttggattgagggtttaggaggagaagggaggggaaag-----tttacttttcttttttaaattatgaactatataacatatttttctaaaattc 9718626  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    ||||| ||||||||| || ||||        |||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  9718625 attaattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 194 - 328
Target Start/End: Original strand, 37032419 - 37032561
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 285  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | || |||        |||||||| |||    
T  37032419 ggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatctta 37032518  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaattt 328  Q
    ||||||||||||||||||||| | ||| |||| ||||||||||    
T  37032519 atatgttaactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 2248455 - 2248666
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||   ||||| ||||||||| ||||||||||     || | ||| | ||||||||||||||  |||||||||||||||||||||||||    
T  2248455 gtgtgtttggattgagagtttaggaggggaagggaggggagag-----ttcaatttccttttttaaattacggtttatataacatgtttttctaaaataa 2248549  T
Q  252 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    || |||||||||||   | ||||        |||  ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||| |    
T  2248550 atcaagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtga 2248649  T
Q  344 acattcccatcccttcc 360  Q
    ||  |||| ||||||||    
T  2248650 accctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 388
Target Start/End: Complemental strand, 41103709 - 41103506
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaa 286  Q
    ||||||||| ||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||        ||||||||||||     
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttat 41103610  T
Q  287 tatgttaactttttaaaaaatatttcatagtatccgtaa--tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    | | |||| ||||| |||||  ||||||||| ||| |||  |||||||| |||||  ||||  |||| || |||||||||||||||  ||||||||||||    
T  41103609 tgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaaca 41103510  T
Q  385 cacc 388  Q
    ||||    
T  41103509 cacc 41103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 338
Target Start/End: Original strand, 28083792 - 28083934
Alignment:
Q  204 tttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaac 295  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||  || |||        ||||||||||| | ||||||||    
T  28083792 tttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaac 28083891  T
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    | ||||||||| || ||||||||||||||||||||||| ||||    
T  28083892 tctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 387
Target Start/End: Complemental strand, 29691038 - 29690925
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| |||  ||| |||||||||||||||  || | || |||  |||||||||||||    
T  29691038 tttatcatgttaatatgttaacttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaactctctcgtctcttttcctcctaaacttt 29690939  T
Q  374 ccatccaaacacac 387  Q
     |||||||||||||    
T  29690938 tcatccaaacacac 29690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 388
Target Start/End: Complemental strand, 40990383 - 40990183
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 290  Q
    |||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| || ||||        ||||||||||||||||    
T  40990383 gtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgttaatatg 40990284  T
Q  291 ttaacttttt--aaaaaatatttcatagtatccgt-aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||||| |||  |||||| |||||||||| ||  | |||| ||||||||||  |||||  |||| ||| |||  |||| ||||  |||||||||||||||    
T  40990283 ttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcctttcttctcccaaaccctccatccaaacacac 40990184  T
Q  388 c 388  Q
    |    
T  40990183 c 40990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 42650540 - 42650468
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42650540 ggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattga 42650468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 345
Target Start/End: Complemental strand, 4247761 - 4247563
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcattttt-aaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||| ||||||| ||||||||| ||||  ||||||||||||| ||||| ||||| |||||| | | |||   | |||||||| |||||||    
T  4247761 gtgtgtttggattgaaggtttaggaggggaagggaggt-agaggagggtttacttttctttttttaaattatgaattatt--atatgtttttttaaaata 4247665  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    |||||||| ||||| | || ||||        |||||||| |||||||||||||| ||||||||||||| | |||  ||||||||||||||| |||||||    
T  4247664 aattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagt-gccgtaatttaaaaataaaaagta 4247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 43732860 - 43732929
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  43732860 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 43732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 10028259 - 10028347
Alignment:
Q  283 ttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 370  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||| | ||||||||||  |||| || ||||| |||||||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaac 10028347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 33922560 - 33922680
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgtta 285  Q
    |||| ||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| ||| ||||||| ||         || ||||||||| ||    
T  33922560 ggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtttatcatgata 33922659  T
Q  286 atatgttaactttttaaaaaa 306  Q
    |||||||||||||||||||||    
T  33922660 atatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 10028156 - 10028222
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  10028156 tttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaagtgtggttga 10028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 344
Target Start/End: Original strand, 13405027 - 13405178
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgtta--- 293  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||||||  | | |||||  | |||        ||||||||||||||| ||||       
T  13405027 ttttcttttttaaataacagactatataacatgtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgttaatt 13405126  T
Q  294 -actttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
     |||||| |||||||||||  || | ||||||||||||||||||||||||||    
T  13405127 cacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagtaaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 9718656 - 9718730
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaa 397  Q
    ||||||||||| ||||||||||| ||||| ||||||| ||||||||||  || ||||||||||||| | ||||||    
T  9718656 taatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccctgaaacaa 9718730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 1281214 - 1281149
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    ||||||||||||||| |||||||||||  || ||||||||||||||||||||  || |||||||||    
T  1281214 tccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 16024327 - 16024394
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||   |||||||||||||||    
T  16024327 tccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 31543249 - 31543319
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||||||  || ||| ||||||||| ||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaaa 31543319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 317
Target Start/End: Complemental strand, 35694862 - 35694828
Alignment:
Q  283 ttaatatgttaactttttaaaaaatatttcatagt 317  Q
    |||||||||||||||||||||||||||||||||||    
T  35694862 ttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 12022330 - 12022281
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  12022330 tttttaaattacggacaatgtaaaatgtttttttaaaataaattaagtgt 12022281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 2248522 - 2248454
Alignment:
Q  320 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| | ||| | |||  |||| ||||||||||||||||||| || |||||||||||||    
T  2248522 ccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 8815316 - 8815383
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||| |||||| |||  |||| ||||| ||||||||||||  || |||||||||||||    
T  8815316 cgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacacc 8815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 24243164 - 24243052
Alignment:
Q  273 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 372  Q
    ||||||||||||| ||| | || ||||||||| | |||| ||||| || ||||||| ||||||||||||||    |||| ||||||||| || ||||||     
T  24243164 atttatcatgttattatttcaa-tttttaaaagacattttatagtgtc-gtaatttcaaaatgaaaagtaagtcatcccttcccttccc-tcttaaactc 24243068  T
Q  373 tccatccaaacacacc 388  Q
    ||||||||||||||||    
T  24243067 tccatccaaacacacc 24243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 3726897 - 3726935
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  3726897 gggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 5562058 - 5562012
Alignment:
Q  297 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||||| || ||| ||| |||||||||||||||||||||||    
T  5562058 ttttaaaaaataatttatattatacgtaatttaaaaatgaaaagtaa 5562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 7394636 - 7394701
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||    
T  7394636 cgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 30365219 - 30365126
Alignment:
Q  301 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    ||||||||||| ||  | | |||||||||||||| |||||| |||  |||| ||| ||| ||||||||||  || ||||||||||||| |||||    
T  30365219 aaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccctaaaa 30365126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 31543106 - 31543143
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacgga 225  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  31543106 gggaggggagggtttacttttcatttttaaattacgga 31543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 38198241 - 38198181
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||||||||||||||||| |||  |||||  ||||||| |||||| ||||||||||||||||    
T  38198241 ttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattga 38198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 42919879 - 42919912
Alignment:
Q  297 ttttaaaaaatatttcatagtatccgtaatttaa 330  Q
    ||||||||||||||| ||||||||||||||||||    
T  42919879 ttttaaaaaatattttatagtatccgtaatttaa 42919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 7503126 - 7503202
Alignment:
Q  318 atccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 394  Q
    |||| ||||||||||| |||||||||||  |||| |||| |||||||| |||   || ||||||||||||| |||||    
T  7503126 atccataatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaaa 7503202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||||||||||||||||  |||| ||||||| | ||||||||  |  |||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 5e-54; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 188 - 388
Target Start/End: Complemental strand, 41497167 - 41496959
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 279  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||        |||||    
T  41497167 gggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatc 41497068  T
Q  280 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 379  Q
    ||||||||||||||| ||||||||||| ||||| || | |||||||||||||||| |||||||||   |||| ||||||||||||||||||  |||||||    
T  41497067 atgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatcc 41496968  T
Q  380 aaacacacc 388  Q
    |||||||||    
T  41496967 aaacacacc 41496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 151 - 345
Target Start/End: Complemental strand, 33655350 - 33655153
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||||  |||||| |||||||||||||| |||     |||||| ||||| ||||||||||| || |||||||||||||||||||||||||    
T  33655350 agtgtgtttggattgagggtttaggaggggaagagaggcgag-----ggtttacttttcttttttaaattatgggctatataacatgtttttctaaaata 33655256  T
Q  251 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    |||||||||||||||| || ||||        |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33655255 aattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagta 33655156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 199 - 369
Target Start/End: Complemental strand, 24970364 - 24970187
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 290  Q
    |||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||        |||||| |||||||||    
T  24970364 gtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatg 24970265  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| | |||||||||||||||    
T  24970264 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatcatcccct-ccttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 188 - 388
Target Start/End: Original strand, 47390889 - 47391098
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---------ttat 278  Q
    ||||| |||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||| || ||||         ||||    
T  47390889 gggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattatatgacttgtttat 47390988  T
Q  279 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 378  Q
    ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||  ||||  |||| |||||||||||| |||||  ||||||    
T  47390989 catgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatc 47391088  T
Q  379 caaacacacc 388  Q
    ||||||||||    
T  47391089 caaacacacc 47391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 198 - 388
Target Start/End: Complemental strand, 40196732 - 40196534
Alignment:
Q  198 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 289  Q
    |||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||        |||||| ||| ||||    
T  40196732 ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatat 40196633  T
Q  290 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| |||| |||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||||| ||||  ||||||||||||||||    
T  40196632 gttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacacc 40196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 189 - 344
Target Start/End: Complemental strand, 34235219 - 34235053
Alignment:
Q  189 ggagaggagggt--ttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------tta 277  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| || ||||        |||    
T  34235219 ggagaggagggtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgttta 34235120  T
Q  278 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  34235119 tcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 387
Target Start/End: Original strand, 42306376 - 42306571
Alignment:
Q  196 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat----ttatcatgttaatatgt 291  Q
    |||||||  ||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||  || ||||    |||| | |||||||||     
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatatgtttatgaggttaatatgc 42306475  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||  |||| ||  ||||||||||||||  || ||||||||||||    
T  42306476 taactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 152 - 393
Target Start/End: Complemental strand, 13771187 - 13770945
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    |||||||| |||||  |||||| ||||||||| |||| |||||     |||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13771187 gtgtgtttagattgagggtttaggaggggaagggaggtgagag-----tttacttttcgtttttaaattacggactatataacatgtttttttaaaataa 13771093  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||||||   ||||||        |||||||||||||||||||||||||||  | ||||||| ||||| |||||||||||||||| | ||||||    
T  13771092 attaagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaacttttt--ataatattttatagtgtccgtaatttaaaaataataagtaa 13770995  T
Q  344 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |   |||| |||||||||||||||||   || ||||||||||||| ||||    
T  13770994 atcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaa 13770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 152 - 370
Target Start/End: Original strand, 25887195 - 25887417
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||||||||||||| ||||||||     | ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  25887195 gtgtgtttggattgagggtttatgaggggaagggaggggag-----gatttgtttttcttttataaatcacggactatataacatgtttttctaaaataa 25887289  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttt-taaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    ||||||||||||||  || |||        |||||||| |||||||||||||||||  |||||| |||||||  | | |||||||||||||||||| |||    
T  25887290 attaagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgta 25887389  T
Q  343 aacattcccatcccttcccctcctaaac 370  Q
    |||  |||| ||||||||||||||||||    
T  25887390 aactctcccctcccttcccctcctaaac 25887417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 152 - 370
Target Start/End: Complemental strand, 1051739 - 1051520
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||  ||||||   |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  1051739 gtgtgtttggattgagggtttaggaggggaagggagg--agagga---tttatttttcttttttaaattacgaactatataacctgtttttctaaaataa 1051645  T
Q  252 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||||||||||||||| |  |||        ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||| || |    
T  1051644 attaagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgtta 1051547  T
Q  344 acattcccatcccttcccctcctaaac 370  Q
    ||  |||| ||  ||||||||||||||    
T  1051546 accctcccctctattcccctcctaaac 1051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 194 - 387
Target Start/End: Original strand, 43230276 - 43230476
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 285  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  |||        ||||||||||||    
T  43230276 ggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgtta 43230375  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 385  Q
    |||||||||||||| |||||| | |||| ||| |||||||||||||||| ||||||||||  |||| | | |||| ||| |||||  | |||||||||||    
T  43230376 atatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccctacatccaaacac 43230474  T
Q  386 ac 387  Q
    ||    
T  43230475 ac 43230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 18231714 - 18231828
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||   |||| ||||||||||||||||||  |    
T  18231714 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgct 18231813  T
Q  374 ccatccaaacacacc 388  Q
    |||||||||||||||    
T  18231814 ccatccaaacacacc 18231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 274 - 384
Target Start/End: Complemental strand, 4833647 - 4833537
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||| |||||||||||| |||| |||||||||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||  |    
T  4833647 tttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccct 4833548  T
Q  374 ccatccaaaca 384  Q
    |||||||||||    
T  4833547 ccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 41008188 - 41008425
Alignment:
Q  155 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaataaat 253  Q
    |||||||||||  |||||  ||||||||| |||||||||      ||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaa-----tttgtttttcttttttaaattacggactatataacatgttttttttaaaataaat 41008282  T
Q  254 taagtgtgattgaggt------gttatttatcatgttaatatgttaacttttta--aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||||||||| ||       || |||||||||||||||||||||||||| |  | ||| |  |||||||||||||||||||||||||||| ||||||    
T  41008283 taagtgtgattgaagttatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaac 41008382  T
Q  346 attcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
      ||   | ||||||||||||||||  | |||||||||||||| ||||    
T  41008383 --tc---ttccttcccctcctaaaccctgcatccaaacacaccctaaa 41008425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 219 - 388
Target Start/End: Complemental strand, 45940835 - 45940658
Alignment:
Q  219 ttacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatt 310  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| ||||| || ||||        |||| ||||||||||  || |||| ||||||| |||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  311 tcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||| |||||||| ||||||| |||||||||| || || ||||||||||| |||||| |||||||||||||||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttccatccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 39856106 - 39856001
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39856106 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 39856012  T
Q  252 attaagtgtga 262  Q
    |||||||||||    
T  39856011 attaagtgtga 39856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 17852906 - 17853067
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 280  Q
    |||| |||||| ||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||        |||||||    
T  17852906 ggaggggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatca 17853005  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    ||||  ||| ||| ||||||||||| | |||||||||   |||||||||||||||||||||||    
T  17853006 tgttgttattttatctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 34228534 - 34228364
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacgga-ctatataacatgtttttctaaaataaattaagtgtgattgaggtgttat------- 274  Q
    |||| ||||| ||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||           
T  34228534 gagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattg 34228435  T
Q  275 -ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 344  Q
     ||||||| |||||||||||||||||| | |||   |||||||| |||||||||  |||||| ||||||||    
T  34228434 cttatcatattaatatgttaacttttttataaaacattcatagtgtccgtaattacaaaatgtaaagtaaa 34228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 211 - 338
Target Start/End: Complemental strand, 40572421 - 40572287
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 302  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||| |||||| | || ||||        ||||||||||||||||||||||||| ||    
T  40572421 ttttaaaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaactttt-aa 40572323  T
Q  303 aaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    ||||||||| |||| |||||||||||||||||||||    
T  40572322 aaaatattttatagcatccgtaatttaaaaatgaaa 40572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 10315761 - 10315872
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    |||||| |||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||| ||||    ||  |||||||||||||||||| ||    
T  10315761 tttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctcccttcccctcctaaacctt 10315860  T
Q  374 ccatccaaacac 385  Q
    ||||||||||||    
T  10315861 ccatccaaacac 10315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 37417842 - 37417706
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 280  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||| || |||        |||||||    
T  37417842 ggaggggatggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatca 37417743  T
Q  281 tgttaatatgttaactttttaaaaaatatttcatagt 317  Q
    ||| ||||||||||||||||| |||| ||||||||||    
T  37417742 tgtgaatatgttaactttttagaaaacatttcatagt 37417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 32872897 - 32872826
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||||||||||    
T  32872897 tttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaagaaaagtaaac 32872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 13425236 - 13425122
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 373  Q
    ||||||||||||||||||| |||||| |||||||||||  |||| || ||||||||||||| |||| |||||  |||  | ||||||||||||||||  |    
T  13425236 tttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccct 13425137  T
Q  374 ccatccaaacacacc 388  Q
    | |||||||||||||    
T  13425136 ctatccaaacacacc 13425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  235 atgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaat 326  Q
    |||||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  327 ttaaaaa 333  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  235 atgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaat 326  Q
    |||||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  327 ttaaaaa 333  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 387
Target Start/End: Original strand, 26365769 - 26366009
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||||  |||||| ||||||    || |||||  ||| ||||| ||||| |||||| |||||  |||||||||||| |||||||||||||    
T  26365769 agtgtgtttggattgagggtttaggagggg----gaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaata 26365864  T
Q  251 aattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 342  Q
    || || |||||||||| || |||        ||| |||||||| ||| |||| |||  |||||||||||  |||||||| ||||||||||| |||||  |    
T  26365865 aactaggtgtgattgaagtattatatgattgtttctcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaatca 26365964  T
Q  343 aacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    |||  |||| || |||||| || |||||  ||| |||||||||||    
T  26365965 aactatcccctctcttcccatcttaaaccctccgtccaaacacac 26366009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 31571711 - 31571600
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaata 250  Q
    ||||||||||||||  |||||| ||||||||| ||||||||||     |||| ||||| |||||||||||||||| |||||||||| ||||| ||||| |    
T  31571711 gtgtgtttggattgagggtttaggaggggaagcgaggggagag-----tttacttttcttttttaaattacggaccatataacatgctttttttaaaaaa 31571617  T
Q  251 a-attaagtgtgattga 266  Q
    | |||||||||||||||    
T  31571616 atattaagtgtgattga 31571600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 48881646 - 48881560
Alignment:
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| ||||| ||| | ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  48881646 aaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacacc 48881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 23029537 - 23029480
Alignment:
Q  195 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 252  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaa 23029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 39856038 - 39856107
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  39856038 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 39856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 388
Target Start/End: Complemental strand, 36267635 - 36267555
Alignment:
Q  308 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||| ||| ||||||||||||||||| ||||| ||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  36267635 attttataatatccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 36267555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 42087041 - 42087188
Alignment:
Q  200 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 291  Q
    |||||||||| |||| |||||||| | |||||||||| || || ||||||||||||||||| |||||  | |||        ||| ||| |||||||||     
T  42087041 tttatttttctttttaaaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgc 42087140  T
Q  292 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 339  Q
    |||||||||||||||  ||  ||| || ||||||||||||||||||||    
T  42087141 taactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaa 42087188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 31571643 - 31571712
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  31571643 tccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacacc 31571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 10315648 - 10315712
Alignment:
Q  189 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 253  Q
    |||| ||||| |||| ||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  10315648 ggaggggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaataaat 10315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 19835838 - 19835906
Alignment:
Q  275 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||| |||||| ||| |||| |||||||| || |||| ||||| |||||||||||||||||||||||||    
T  19835838 ttatgatgttattattttaattttttaaagaacattttatagtttccgtaatttaaaaatgaaaagtaa 19835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 31553287 - 31553182
Alignment:
Q  285 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    |||||||||||||||||||||| |||||||| | ||||| |||| ||||| ||||||  ||  || | ||||||||||||||||||  ||||||||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttattt-aaaattaaaagt-gaccctctcctcccttcccctcctaaac-ctccatccaaaca 31553191  T
Q  385 caccataaa 393  Q
    |||| ||||    
T  31553190 caccctaaa 31553182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 33519105 - 33519290
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 302  Q
    ||||||||||||| || |||||| |||||||| | |||||||||||||||  |||| || ||||        ||||||||||  ||  | || ||| |||    
T  33519105 tttttaaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaa 33519204  T
Q  303 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||  |||| ||| | || |||||||||| | ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  33519205 aaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacacc 33519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 47229948 - 47229888
Alignment:
Q  274 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaat 334  Q
    |||||||||||||||||||  |||||||| |||||||||||| || ||||| |||||||||    
T  47229948 tttatcatgttaatatgttcgctttttaagaaatatttcataatacccgtagtttaaaaat 47229888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 48152036 - 48152092
Alignment:
Q  206 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    |||| ||||||||||||||    |||||||||||||||||||||||||| |||||||||||    
T  48152036 tttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattga 48152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 13771119 - 13771188
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  || | ||||||||||||||||||  || ||| |||||||||    
T  13771119 tccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacacc 13771188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 28074174 - 28074105
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| ||||||| |    |||| |||||||||||||||||| ||| |||||||||||||    
T  28074174 tccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacc 28074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 388
Target Start/End: Complemental strand, 30592372 - 30592255
Alignment:
Q  271 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 370  Q
    ||||||||||| | | ||| | || ||||||||||  |||| ||||| || |||||||||||| ||||||||| |  |||| |||||| ||||||||||     
T  30592372 ttatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaat 30592273  T
Q  371 tttccatccaaacacacc 388  Q
      |||||||||| |||||    
T  30592272 cctccatccaaatacacc 30592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 34228492 - 34228561
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||| |||||||||||||||   |||| ||||||| |||||||||| ||| || ||||||||||    
T  34228492 tccgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacacc 34228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 38378096 - 38378165
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat 274  Q
    ||||| |||||||| |||| ||||||||||||||||||  ||||||||| || ||| |||||||| ||||    
T  38378096 ttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattat 38378165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 40196566 - 40196619
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttt 241  Q
    |||||||||||||||| ||||||||||| ||||||||||  ||||| |||||||    
T  40196566 gggagaggagggtttacttttcatttttgaattacggacactataaaatgtttt 40196619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 2087833 - 2087786
Alignment:
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
    |||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  2087833 tttttaaaaattattttataatatccgtaatttaaaaaagaaaagtaa 2087786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 30891078 - 30891039
Alignment:
Q  306 atatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  30891078 atattttatagtgtccgtaatttaaaaatgaaaagtaaac 30891039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 37925910 - 37925843
Alignment:
Q  321 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||||    
T  37925910 cgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 37925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 47390922 - 47390852
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    ||||||||||| |||||||||||  |||  |||||||||||||||| |  || ||||||||||||| ||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaaa 47390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 48013558 - 48013608
Alignment:
Q  210 atttttaaattacggactatataacatgtttttctaaaataaattaagtgt 260  Q
    |||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  48013558 atttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgt 48013608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 18795788 - 18795727
Alignment:
Q  205 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 266  Q
    ||||| ||||||||||||| || |||||| |||||||| ||||| |||| |||||| |||||    
T  18795788 ttttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattga 18795727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 28074106 - 28074147
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggaga 193  Q
    |||||||||||||| ||||||| ||||||||| |||||||||    
T  28074106 gtgtgtttggattgaaggtttaggaggggaagggaggggaga 28074147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 33655148 - 33655180
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||| ||||||||||||||||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggac 33655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 387
Target Start/End: Original strand, 33655285 - 33655349
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||| |||||||||||  || | || |||||||||||||||  || ||||||||||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 346
Target Start/End: Original strand, 34235180 - 34235208
Alignment:
Q  318 atccgtaatttaaaaatgaaaagtaaaca 346  Q
    |||||||||||||||||||||||||||||    
T  34235180 atccgtaatttaaaaatgaaaagtaaaca 34235208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 37925844 - 37925947
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 251  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| | ||||  ||||||||||||| || || ||| |||||||| | |||||     
T  37925844 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatag 37925938  T
Q  252 attaagtgt 260  Q
    |||||||||    
T  37925939 attaagtgt 37925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 188 - 394
Target Start/End: Complemental strand, 39400 - 39182
Alignment:
Q  188 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgagg----------tgtt-attt 276  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |          || | ||||    
T  39400 gggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagtgtgattgaagaagtattatatgatcattt 39301  T
Q  277 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaactttcc 375  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||  ||  ||||||||||||||  |||    
T  39300 atcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctcc 39201  T
Q  376 atccaaacacaccataaaa 394  Q
    ||||||||||||| |||||    
T  39200 atccaaacacaccctaaaa 39182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 39363 - 39432
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    ||||||||||||||| |||||||||||  |||| |||||| |||| ||||||  || |||||||||||||    
T  39363 tccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacc 39432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 39189 - 39259
Alignment:
Q  152 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 226  Q
    |||||||||||| |  |||||| ||||||||  ||||||    ||||||||| ||||||||||||||||||||||    
T  39189 gtgtgtttggatggagggtttaggaggggaaatgagggg----gagggtttacttttcatttttaaattacggac 39259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 384
Target Start/End: Complemental strand, 16500 - 16302
Alignment:
Q  194 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 285  Q
    |||||||||| ||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| || ||||        |||||||||||    
T  16500 ggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 16401  T
Q  286 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 384  Q
    |||||||||| ||||| |||| |||||||||| | | |||||||||||||||||||||||  |||| ||| || |||||||||||  ||||||||||||    
T  16400 atatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaaca 16302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 199 - 369
Target Start/End: Original strand, 15995 - 16173
Alignment:
Q  199 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattta--------tcatgttaatatg 290  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || || | ||        |||| ||||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  291 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 369  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||  |  | |||||||||||||||||    
T  16095 ttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaa 16173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 6613 - 6780
Alignment:
Q  183 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-ttatc-- 279  Q
    |||| ||||| |||||||||| ||||| |||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||| || |||| | |||      
T  6613 gagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagtgtgattgaagtattatatgatcgt 6712  T
Q  280 ----atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 343  Q
        |||||||||| |||| ||||| |||||||||||||||| | ||||||||||||| |||||||||    
T  6713 ttatatgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 6652 - 6581
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 393  Q
    |||||||||||| |||||||||||  |||| ||||||| |||||||||  ||| ||||||||||||| ||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaaa 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 18807 - 18968
Alignment:
Q  190 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta-------tttatcatg 282  Q
    |||||||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||||||| |||| |||||  | |||       |||||||||    
T  18807 gagaggagggtttatttt-cttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatctttatcatg 18905  T
Q  283 ttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 345  Q
    ||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  18906 ttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 18968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 391
Target Start/End: Original strand, 15320 - 15507
Alignment:
Q  211 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaa 302  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||| |||| || |||        ||||||| ||||||||||| || ||||||    
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaa 15419  T
Q  303 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccata 391  Q
    |||| | |||||||| |||||||||||||||| ||||||| |   ||   ||||||||| ||||||||  |||||||||||||||||||    
T  15420 aaaaca-ttcatagtgtccgtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccctccatccaaacacaccata 15507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 151 - 351
Target Start/End: Original strand, 1174 - 1377
Alignment:
Q  151 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 250  Q
    |||||||||||||||  |||||| ||||||||||||||||||||     |||| ||||| ||||||||||||||||||| ||||||||| |||||    |    
T  1174 agtgtgtttggattgagggtttaggaggggaagagaggggagag-----tttacttttcttttttaaattacggactatgtaacatgttattcta----a 1264  T
Q  251 aattaagtgtgattgaggtgtta------------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 338  Q
    |||||||| ||| ||| || |||            |||||||||  |||||||||||||||||||||| |||||||||| | | ||||||||||||||||    
T  1265 aattaagtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaa 1364  T
Q  339 agtaaacattccc 351  Q
    ||||||| |||||    
T  1365 agtaaaccttccc 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 1243 - 1175
Alignment:
Q  319 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || ||||||||||||    
T  1243 tccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0198 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  302 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 387  Q
    ||||| |||||||||| || |||||||||||| |||||||||||  |||| ||||||||||||||||||| || ||||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 242366 - 242456
Alignment:
Q  296 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||  |||| ||| | ||||||||||||||| |||||||||||  |||| |||||||||||  |||||  ||||||||||||||    
T  242366 tttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 17716 - 17780
Alignment:
Q  322 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 388  Q
    |||||||||||| |||||||||||   ||| |||||||| |||||||||  ||||||||||||||||    
T  17716 gtaatttaaaaaagaaaagtaaacc--cccctcccttccactcctaaaccctccatccaaacacacc 17780  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  323 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 386  Q
    ||||||||||| ||| |||||||  |||| |||||| |||||||||||  ||||||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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