View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12310_low_3 (Length: 310)
Name: NF12310_low_3
Description: NF12310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12310_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 15047592 - 15047296
Alignment:
| Q |
1 |
aggttgatgatatacttgcggaagcgtttcttagtgatgagcctgtttcagatgttgatcttgaggtgagtgggtagcagtctttttgtcctgagttttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
15047592 |
aggttgatgatatacttgcggaagcgtttcttagtgatgagcctgtttcagatgttgatcttgaggtgagtgggtagcagtctttttgtcctgatttttg |
15047493 |
T |
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| Q |
101 |
tatgccaatgatttgttttatgggaaatgcatcatactatcctacttctaacaattagtttcttggcccattctctgaatgtgctgtggaccttatggtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
15047492 |
tatgccaatgatttgttttatgggaaatgcatcatactatcctacttctaacaattagtttcttggcccatcctctgaatgtgctgtggaccttatggtt |
15047393 |
T |
|
| Q |
201 |
tgagcactctagctgtgcctagaaaaaatgctatagacatgtcacagtgtcagattgtaatagtctcactattttaacagaaaatctattcacacag |
297 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
15047392 |
tgagcactatagctgtgcctagaaaaaatgctatagacatgtcacagtgtcagattgtaatagtctcactattttaactgaaaatctattcacacag |
15047296 |
T |
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