View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12312_low_7 (Length: 301)
Name: NF12312_low_7
Description: NF12312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12312_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 46034849 - 46034588
Alignment:
| Q |
23 |
aagaacttaaattagttcacccaaattgataataaggagaagaactaagaccttgcggaagaacatactctaagaccttaaaccaacatcactagatcaa |
122 |
Q |
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| T |
46034849 |
aagaacttaaactagtccacccaaattgataataaggagaagaaccgaaaccttgagaaagaatatattttaagacctcaaaccaacatcactagatcaa |
46034750 |
T |
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| Q |
123 |
tctaagtaagttattatatgtcaaaacattatatggaaagtgacttgaaaaaatgtcaccgttcacggtttcaatttttcactacttgaacaagtcacca |
222 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
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| T |
46034749 |
tctaagtgagttattatatgtcaaaacattatatggaaagtgacttgaaaaaatgtcacctttcacggtttcaattttccactacttgaacaagtcacca |
46034650 |
T |
|
| Q |
223 |
tttaaaaaatgtaaacttgaagcccaagatagttctccacatttctacttgtatggtgttag |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46034649 |
tttaaaaaatgtaaacttgaagcccaagatagttctccacatttctacttgtatggtgttag |
46034588 |
T |
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