View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12313_low_9 (Length: 371)

Name: NF12313_low_9
Description: NF12313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12313_low_9
NF12313_low_9
[»] chr4 (24 HSPs)
chr4 (16-353)||(21658545-21658894)
chr4 (134-347)||(21663465-21663678)
chr4 (134-347)||(21672229-21672442)
chr4 (44-113)||(847958-848027)
chr4 (43-113)||(24613684-24613754)
chr4 (45-100)||(5775354-5775409)
chr4 (37-92)||(7214526-7214581)
chr4 (45-131)||(14126075-14126162)
chr4 (44-110)||(30838217-30838283)
chr4 (44-113)||(30982861-30982930)
chr4 (43-92)||(35157989-35158038)
chr4 (43-92)||(54580027-54580076)
chr4 (44-92)||(8423722-8423770)
chr4 (44-92)||(23292990-23293038)
chr4 (44-92)||(33950143-33950191)
chr4 (45-92)||(6485615-6485662)
chr4 (45-92)||(12895278-12895325)
chr4 (37-88)||(36635324-36635375)
chr4 (46-92)||(9996849-9996895)
chr4 (45-114)||(40742599-40742668)
chr4 (42-71)||(40965008-40965037)
chr4 (38-90)||(999354-999406)
chr4 (44-92)||(2361979-2362027)
chr4 (44-92)||(29205451-29205499)
[»] chr5 (28 HSPs)
chr5 (43-130)||(22423777-22423865)
chr5 (44-113)||(19579708-19579777)
chr5 (44-112)||(3966510-3966578)
chr5 (45-113)||(30098334-30098402)
chr5 (44-130)||(36838550-36838637)
chr5 (45-131)||(13287365-13287450)
chr5 (47-100)||(14873527-14873580)
chr5 (42-83)||(35017042-35017083)
chr5 (44-113)||(39698548-39698617)
chr5 (44-92)||(16203799-16203847)
chr5 (44-92)||(23012412-23012460)
chr5 (42-105)||(3751921-3751984)
chr5 (44-115)||(7677712-7677783)
chr5 (44-91)||(14674276-14674323)
chr5 (45-92)||(28588678-28588725)
chr5 (44-110)||(41091243-41091309)
chr5 (44-113)||(11685946-11686014)
chr5 (38-83)||(12927655-12927700)
chr5 (44-89)||(27144470-27144515)
chr5 (43-92)||(33178031-33178080)
chr5 (47-92)||(43564891-43564936)
chr5 (44-92)||(6247629-6247677)
chr5 (44-88)||(6471897-6471941)
chr5 (45-89)||(7175026-7175070)
chr5 (44-92)||(21191060-21191108)
chr5 (44-92)||(30502392-30502440)
chr5 (44-92)||(30542735-30542783)
chr5 (45-113)||(36642745-36642813)
[»] chr8 (34 HSPs)
chr8 (43-113)||(15816112-15816182)
chr8 (43-113)||(29447093-29447163)
chr8 (44-113)||(2572039-2572108)
chr8 (44-113)||(22651983-22652052)
chr8 (38-92)||(26434181-26434235)
chr8 (44-130)||(25566848-25566936)
chr8 (38-92)||(38278179-38278233)
chr8 (44-113)||(25172681-25172750)
chr8 (44-113)||(29510287-29510356)
chr8 (44-112)||(29776043-29776109)
chr8 (44-92)||(8342979-8343027)
chr8 (44-92)||(13844600-13844648)
chr8 (44-88)||(14731719-14731763)
chr8 (44-92)||(20679399-20679447)
chr8 (44-92)||(31236581-31236629)
chr8 (44-92)||(39954283-39954331)
chr8 (45-92)||(4298890-4298937)
chr8 (28-83)||(13203632-13203687)
chr8 (45-92)||(20873077-20873124)
chr8 (44-91)||(27213554-27213601)
chr8 (45-92)||(33405388-33405435)
chr8 (44-90)||(34897092-34897138)
chr8 (46-92)||(40332200-40332246)
chr8 (44-89)||(3025558-3025603)
chr8 (43-92)||(4948658-4948707)
chr8 (44-89)||(8343323-8343368)
chr8 (43-92)||(14134705-14134754)
chr8 (44-89)||(20785472-20785517)
chr8 (44-113)||(21465419-21465488)
chr8 (45-114)||(28384976-28385045)
chr8 (45-89)||(8798838-8798882)
chr8 (44-92)||(12606833-12606881)
chr8 (44-92)||(25192351-25192399)
chr8 (42-113)||(27067283-27067352)
[»] chr7 (29 HSPs)
chr7 (44-92)||(3721100-3721148)
chr7 (43-113)||(11665423-11665493)
chr7 (44-113)||(24339649-24339718)
chr7 (44-92)||(11061080-11061128)
chr7 (44-92)||(19206057-19206105)
chr7 (44-130)||(7328652-7328743)
chr7 (43-92)||(3991330-3991379)
chr7 (45-106)||(7438714-7438775)
chr7 (45-113)||(9408317-9408385)
chr7 (45-113)||(15902830-15902898)
chr7 (44-92)||(19992008-19992056)
chr7 (44-92)||(24146823-24146871)
chr7 (44-91)||(14077439-14077486)
chr7 (44-91)||(14387467-14387514)
chr7 (44-111)||(26033446-26033513)
chr7 (42-101)||(27945046-27945105)
chr7 (45-88)||(35297680-35297723)
chr7 (38-92)||(21880153-21880207)
chr7 (47-92)||(9778510-9778555)
chr7 (44-113)||(32308127-32308196)
chr7 (44-92)||(1401032-1401080)
chr7 (57-113)||(2334270-2334325)
chr7 (43-91)||(4024033-4024081)
chr7 (45-113)||(6028633-6028701)
chr7 (44-92)||(15680816-15680864)
chr7 (44-92)||(20549798-20549846)
chr7 (44-92)||(27093417-27093465)
chr7 (44-92)||(27184836-27184884)
chr7 (57-113)||(27229294-27229350)
[»] chr6 (31 HSPs)
chr6 (44-112)||(21395292-21395359)
chr6 (44-92)||(7086802-7086850)
chr6 (44-112)||(16766704-16766772)
chr6 (45-112)||(4118317-4118384)
chr6 (44-113)||(9195737-9195806)
chr6 (45-114)||(9617442-9617511)
chr6 (44-92)||(7265597-7265645)
chr6 (44-92)||(7938123-7938171)
chr6 (44-92)||(9025498-9025546)
chr6 (44-112)||(9107354-9107422)
chr6 (43-103)||(19044470-19044530)
chr6 (45-92)||(5732514-5732561)
chr6 (43-102)||(10770668-10770727)
chr6 (44-91)||(30866149-30866196)
chr6 (44-82)||(8805586-8805624)
chr6 (46-92)||(9629392-9629438)
chr6 (45-106)||(7569158-7569219)
chr6 (38-83)||(15443696-15443741)
chr6 (44-89)||(19040359-19040404)
chr6 (44-113)||(26562696-26562765)
chr6 (37-106)||(34073337-34073406)
chr6 (43-92)||(34595140-34595189)
chr6 (45-113)||(5970091-5970159)
chr6 (44-92)||(7377986-7378034)
chr6 (44-130)||(7723212-7723302)
chr6 (45-89)||(17341671-17341715)
chr6 (44-92)||(17841593-17841641)
chr6 (44-92)||(26178685-26178733)
chr6 (44-88)||(32511674-32511718)
chr6 (44-92)||(33001293-33001341)
chr6 (44-92)||(34172200-34172248)
[»] scaffold0168 (2 HSPs)
scaffold0168 (45-124)||(21051-21130)
scaffold0168 (74-128)||(21209-21263)
[»] chr1 (39 HSPs)
chr1 (47-113)||(44482240-44482306)
chr1 (38-89)||(7918218-7918269)
chr1 (45-92)||(21530697-21530744)
chr1 (49-92)||(25272494-25272537)
chr1 (42-113)||(25361891-25361962)
chr1 (42-92)||(14332646-14332696)
chr1 (43-92)||(22881620-22881669)
chr1 (44-92)||(1486713-1486761)
chr1 (44-92)||(22515891-22515939)
chr1 (44-92)||(36878468-36878516)
chr1 (44-92)||(41877474-41877522)
chr1 (45-113)||(47989505-47989573)
chr1 (45-92)||(1864884-1864931)
chr1 (42-113)||(9828049-9828120)
chr1 (45-92)||(22907343-22907390)
chr1 (44-91)||(31015050-31015097)
chr1 (57-112)||(31694694-31694749)
chr1 (44-102)||(6427357-6427415)
chr1 (42-112)||(12713311-12713381)
chr1 (42-112)||(12717402-12717472)
chr1 (43-113)||(32461447-32461516)
chr1 (44-81)||(1262891-1262928)
chr1 (44-113)||(5376483-5376552)
chr1 (44-113)||(9629883-9629952)
chr1 (43-92)||(24577190-24577239)
chr1 (42-83)||(34298441-34298482)
chr1 (44-89)||(34712390-34712435)
chr1 (43-88)||(35999330-35999375)
chr1 (45-113)||(6612154-6612222)
chr1 (44-92)||(9709827-9709875)
chr1 (37-89)||(10233253-10233305)
chr1 (42-70)||(10572615-10572643)
chr1 (45-89)||(15323171-15323215)
chr1 (45-89)||(16164322-16164366)
chr1 (160-224)||(19977151-19977215)
chr1 (44-92)||(38078665-38078713)
chr1 (44-92)||(39953150-39953198)
chr1 (44-92)||(40181878-40181926)
chr1 (44-92)||(46348387-46348435)
[»] scaffold0044 (1 HSPs)
scaffold0044 (46-111)||(53189-53254)
[»] chr2 (23 HSPs)
chr2 (24-72)||(3415014-3415062)
chr2 (44-92)||(18420438-18420486)
chr2 (36-83)||(2665901-2665948)
chr2 (45-92)||(30527599-30527646)
chr2 (42-92)||(5367197-5367247)
chr2 (38-92)||(12668427-12668481)
chr2 (55-113)||(34784965-34785023)
chr2 (44-113)||(11223846-11223915)
chr2 (44-113)||(30717513-30717582)
chr2 (43-112)||(36756328-36756397)
chr2 (43-92)||(38442313-38442362)
chr2 (44-113)||(44860327-44860396)
chr2 (45-108)||(2331802-2331863)
chr2 (44-112)||(18889575-18889643)
chr2 (44-92)||(20539678-20539726)
chr2 (44-88)||(21616769-21616813)
chr2 (44-92)||(23718033-23718081)
chr2 (44-92)||(24105705-24105753)
chr2 (44-92)||(31018597-31018645)
chr2 (45-113)||(36281693-36281761)
chr2 (47-114)||(36409611-36409676)
chr2 (44-92)||(39026825-39026873)
chr2 (44-92)||(42832280-42832328)
[»] scaffold0697 (1 HSPs)
scaffold0697 (45-92)||(1652-1699)
[»] scaffold0236 (1 HSPs)
scaffold0236 (45-92)||(25772-25819)
[»] scaffold0223 (1 HSPs)
scaffold0223 (44-128)||(20179-20261)
[»] scaffold0011 (1 HSPs)
scaffold0011 (43-92)||(17753-17802)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-113)||(263355-263424)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-113)||(241601-241670)
[»] chr3 (27 HSPs)
chr3 (44-89)||(49505161-49505206)
chr3 (43-92)||(55401081-55401130)
chr3 (44-92)||(1509546-1509594)
chr3 (44-92)||(8383264-8383312)
chr3 (44-88)||(11313808-11313852)
chr3 (44-92)||(21256990-21257038)
chr3 (45-89)||(32804547-32804591)
chr3 (44-92)||(49651790-49651838)
chr3 (44-111)||(8039820-8039887)
chr3 (37-92)||(17005623-17005678)
chr3 (45-92)||(39756244-39756291)
chr3 (43-113)||(14209119-14209189)
chr3 (45-111)||(16789020-16789086)
chr3 (44-82)||(27277852-27277890)
chr3 (44-90)||(34307786-34307832)
chr3 (38-83)||(1438805-1438850)
chr3 (44-92)||(7928457-7928505)
chr3 (45-89)||(10268493-10268537)
chr3 (44-92)||(11665951-11665999)
chr3 (42-70)||(24633771-24633799)
chr3 (44-88)||(25948895-25948939)
chr3 (44-92)||(26508117-26508165)
chr3 (44-92)||(28678310-28678358)
chr3 (44-92)||(28918008-28918056)
chr3 (43-111)||(34910323-34910391)
chr3 (44-92)||(45451560-45451608)
chr3 (45-89)||(48202276-48202320)
[»] scaffold0123 (1 HSPs)
scaffold0123 (44-112)||(44509-44577)
[»] scaffold0024 (1 HSPs)
scaffold0024 (45-89)||(68249-68293)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-113)||(9730-9801)
[»] scaffold0227 (1 HSPs)
scaffold0227 (43-88)||(7319-7364)
[»] scaffold0722 (1 HSPs)
scaffold0722 (44-88)||(7040-7084)
[»] scaffold0122 (1 HSPs)
scaffold0122 (44-92)||(8673-8721)
[»] scaffold0085 (1 HSPs)
scaffold0085 (42-70)||(26398-26426)
[»] scaffold0020 (1 HSPs)
scaffold0020 (44-92)||(135316-135364)


Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 353
Target Start/End: Complemental strand, 21658894 - 21658545
Alignment:
Q  16 agacacatatattgatacgttaacatcactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgtc 115  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21658894 agacatatatattgatacgttaacaccactaataatttgagaaaatcacataatttactataattttaagtgtcggtttcatgtcagtgtcggacacgtc 21658795  T
Q  116 taatccgaggagtgt------------aaccaaaacgttaatttaaattcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaa 203  Q
    |||||||||||||||            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658794 taatccgaggagtgtccattcttggtaaaccaaaacgttaatttaaactcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaa 21658695  T
Q  204 agcctcccatgccttctgcacatacttctctatagctccaccatcagccgccacatcaagctccaccgcaacggcacggagacttccctcctttccattg 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  21658694 agcctcccatgccttctgcacatacttctctatagctccaccatcagccgccacatcaagctccaccgcaacagcacggagccttccatcctttccattg 21658595  T
Q  304 atttcatcacacaatgactgtaaacgatctacacgacgagccgctgcaat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21658594 atttcatcacacaatgactgtaaacgatctacacgacgagccgccgcaat 21658545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 134 - 347
Target Start/End: Complemental strand, 21663678 - 21663465
Alignment:
Q  134 caaaacgttaatttaaattcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaaagcctcccatgccttctgcacatacttctc 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21663678 caaaacattaatttaaattcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaaagcctcccatgccttctgcacatacttctc 21663579  T
Q  234 tatagctccaccatcagccgccacatcaagctccaccgcaacggcacggagacttccctcctttccattgatttcatcacacaatgactgtaaacgatct 333  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21663578 tatagctccaccatcagccgccacatcaagctccaccgcaacagcacggagccttccatcctttccattgatttcatcacacaatgactgtaaacgatct 21663479  T
Q  334 acacgacgagccgc 347  Q
    ||||||||||||||    
T  21663478 acacgacgagccgc 21663465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 134 - 347
Target Start/End: Complemental strand, 21672442 - 21672229
Alignment:
Q  134 caaaacgttaatttaaattcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaaagcctcccatgccttctgcacatacttctc 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21672442 caaaacattaatttaaattcaaattacctctaacaccagcattattgatcaacgcatcaatatgtccaaaagcctcccatgccttctgcacatacttctc 21672343  T
Q  234 tatagctccaccatcagccgccacatcaagctccaccgcaacggcacggagacttccctcctttccattgatttcatcacacaatgactgtaaacgatct 333  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21672342 tatagctccaccatcagccgccacatcaagctccaccgcaacagcacggagccttccatcctttccattgatttcatcacacaatgactgtaaacgatct 21672243  T
Q  334 acacgacgagccgc 347  Q
    ||||||||||||||    
T  21672242 acacgacgagccgc 21672229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 847958 - 848027
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||| || |||  ||||||||||||    
T  847958 ctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacg 848027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 24613754 - 24613684
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||||||||||||| | | ||| || |||||||||| ||||||| ||||| ||||||    
T  24613754 actaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacg 24613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 5775409 - 5775354
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtc 100  Q
    |||||||||||||||||||||||||| | | |||||||| |||||||| |||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtc 5775354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 7214581 - 7214526
Alignment:
Q  37 aacatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||| | ||||||    
T  7214581 aacaccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggt 7214526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 14126162 - 14126075
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc-ggtttcatgtcagtgtcggacacgtctaatccgaggagtgta 131  Q
    ||||||||||| ||| |||||||||| | | ||||||||||||||  || || |||| |||||||||||| ||||||||| |||||||    
T  14126162 taataatttgataaagtcacataattcagtgtaattataagtgtcatgtctcgtgtccgtgtcggacacgcctaatccgaagagtgta 14126075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 30838217 - 30838283
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggac 110  Q
    |||||||||||| ||||| | |||||||| | ||||||||||| ||||| || ||||||||||||||    
T  30838217 ctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggac 30838283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 30982930 - 30982861
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||| |||||||||||||||||| || | | ||||||||||||||||| || |||| ||||| ||||||    
T  30982930 ctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacg 30982861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 35158038 - 35157989
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||  |||||||||||||||| | |||||||||||||||||    
T  35158038 actaataatttggaaaaatcacataatttagtgtaattataagtgtcggt 35157989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 54580076 - 54580027
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||| | | |||||||||||||||||    
T  54580076 actaataatttgaaaaaatcacataattcagtgtaattataagtgtcggt 54580027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 8423770 - 8423722
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | ||||||||| |||||||    
T  8423770 ctaataatttgagaaaatcacataattcagtgtaattataaatgtcggt 8423722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 23293038 - 23292990
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | |||||||| ||||||||||    
T  23293038 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 23292990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 33950143 - 33950191
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||||| | |||| ||| ||||||||    
T  33950143 ctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggt 33950191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 6485662 - 6485615
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 6485615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 12895325 - 12895278
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||| |||||||||||||||  | |||||||||||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggt 12895278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 36635324 - 36635375
Alignment:
Q  37 aacatcactaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    |||| ||||||||||||||||||||||||||||| | | |||||||| ||||    
T  36635324 aacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 9996849 - 9996895
Alignment:
Q  46 aataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||| | |||||||||| || |||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggt 9996895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 40742599 - 40742668
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgt 114  Q
    ||||||||||||||||||| ||||| || | |||||||| |||||| | || |||| ||||| |||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacgt 40742668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 40965008 - 40965037
Alignment:
Q  42 cactaataatttgagaaaatcacataattt 71  Q
    ||||||||||||||||||||||||||||||    
T  40965008 cactaataatttgagaaaatcacataattt 40965037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 999406 - 999354
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtcg 90  Q
    ||||| ||||||||||||| |||||| |||||||| | |||||||| ||||||    
T  999406 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 2362027 - 2361979
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||||| |||||||||| | |||||| ||||||||||    
T  2362027 ctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggt 2361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 29205451 - 29205499
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 29205499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 22423865 - 22423777
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtc-ggacacgtctaatccgaggagtgt 130  Q
    |||||||||||||||||||||||||||| | ||||||||||  ||||||| || |||| ||||| ||||||| ||||||||||||||||    
T  22423865 actaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtctggacacgcctaatccgaggagtgt 22423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 19579708 - 19579777
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||||||||||||||||||| |  ||||| |||||||||| || |||||||||||||||||    
T  19579708 ctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacg 19579777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3966510 - 3966578
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||||||||||||| |||| | | |||||||| |||||||| || ||||||||||||||||    
T  3966510 ctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 30098334 - 30098402
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||||||||||| | | ||||||||  ||||||| ||  ||||||||||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacg 30098402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 36838550 - 36838637
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatg-tcagtgtcggacacgtctaatccgaggagtgt 130  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||| || || |  ||||| |||||| ||||||| ||||||||    
T  36838550 ctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtttggtgtccgacacgcctaatccaaggagtgt 36838637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 13287450 - 13287365
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgtctaatccgaggagtgta 131  Q
    ||||||||||| |||||||||||||| | | ||| || |||||||||| || ||||  ||||||||||| |||||| ||||||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc-ctgtcggacacgcctaatctgaggagtgta 13287365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 14873527 - 14873580
Alignment:
Q  47 ataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtc 100  Q
    |||||||||||||| ||||||||||| | |||||||| |||||||| |||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtc 14873580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 35017042 - 35017083
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattata 83  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  35017042 cactaataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 39698548 - 39698617
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||| || || |||| ||||||||||||    
T  39698548 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacg 39698617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 16203847 - 16203799
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  16203847 ctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggt 16203799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 23012460 - 23012412
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||| |||||||| | |||||||| ||||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggt 23012412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 3751984 - 3751921
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgt 105  Q
    ||||||||||||||||||||||||||| | | |||||||||| ||||  || || |||||||||    
T  3751984 cactaataatttgagaaaatcacataactaagtataattatatgtgttagtatcgtgtcagtgt 3751921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 7677712 - 7677783
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgtc 115  Q
    |||||||||||| |||||||||||||| | |  ||||| |||||||||| || |||| ||||| ||||||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtc 7677783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 14674276 - 14674323
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    |||||||||||| |||||||||||||||| | |||||| |||||||||    
T  14674276 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 28588725 - 28588678
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||||| | | |||||||| ||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggt 28588678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 41091309 - 41091243
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggac 110  Q
    ||||| ||||||||||||||||||||| | | |||||||| |||||| | || ||||| ||||||||    
T  41091309 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggac 41091243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 11685946 - 11686014
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||| || ||||||||| | |||||||| |||||||| || | || ||||||||||||    
T  11685946 ctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacg 11686014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 12927655 - 12927700
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattata 83  Q
    ||||| |||||||||||||||||||| |||||||| | ||||||||    
T  12927655 acatcgctaataatttgagaaaatcatataatttagtgtaattata 12927700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 27144470 - 27144515
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||| ||||||||||||||| | |||||||| |||||    
T  27144470 ctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 33178031 - 33178080
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||| | |||||||||||||||| | |||||| ||||||||||    
T  33178031 actaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggt 33178080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 43564891 - 43564936
Alignment:
Q  47 ataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||  |||||||||||||||| | |||||||||||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggt 43564936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 6247629 - 6247677
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 6247677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 6471941 - 6471897
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 7175070 - 7175026
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    |||||||||||||||||||||||||||   ||||||||| |||||    
T  7175070 taataatttgagaaaatcacataatttggcataattatatgtgtc 7175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 21191108 - 21191060
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 21191060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 30502440 - 30502392
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||| ||||| | | |||||||| ||||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggt 30502392  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 30542783 - 30542735
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||| ||||| | | |||||||| ||||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggt 30542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 36642813 - 36642745
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| ||| | ||||| |||| | ||| ||||||||||||| ||||||  ||||||||||||    
T  36642813 taataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacg 36642745  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 15816182 - 15816112
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||| || |||  ||||||||||||    
T  15816182 actaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacg 15816112  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 29447163 - 29447093
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||||||||||||| | | ||| || |||||||||| ||||||| ||||||||||||    
T  29447163 actaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacg 29447093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 2572108 - 2572039
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| |||||||||||||||| | |||||| |||||||||| || |||| ||||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacg 2572039  T

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Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 22651983 - 22652052
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| |||||||||||||| | |||||||| |||||||||| || |||| ||||||||||||    
T  22651983 ctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacg 22652052  T

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Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 26434181 - 26434235
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||||||| | |||||||| ||||||||||    
T  26434181 acatcactaatagtttgagaaaatcacataattcaatataattaaaagtgtcggt 26434235  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 25566848 - 25566936
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtc--ggacacgtctaatccgaggagtgt 130  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||||| || |||  |||||  ||||||| ||||||||||||||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgt 25566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 38278233 - 38278179
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||| || |||||    
T  38278233 acatcgctaataatttaagaaaatcacataatttaatataattatacgtatcggt 38278179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 25172750 - 25172681
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| ||||| ||||| |||| | |||||||| |||||||| || ||||| |||||||||||    
T  25172750 ctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacacg 25172681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 29510356 - 29510287
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| ||||||||| |||| | |||||||| |||||||||| |  |||| ||||||||||||    
T  29510356 ctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacg 29510287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 29776043 - 29776109
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    ||||||||||||||||||||| ||||| | ||||||||||  ||||||| | | |||||||||||||||    
T  29776043 ctaataatttgagaaaatcacgtaattcagtataattata--tgtcggtgttaagtcagtgtcggacac 29776109  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 8342979 - 8343027
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 8343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 13844648 - 13844600
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||||    
T  13844648 ctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggt 13844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 14731719 - 14731763
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 20679447 - 20679399
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||| || | | |||||||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggt 20679399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 31236629 - 31236581
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggt 31236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 39954331 - 39954283
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||||| | |||||||| ||| ||||    
T  39954331 ctaataatttgagaaaatcacataatttagtgtaattatatgtgacggt 39954283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 4298937 - 4298890
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  4298937 taataatttgaaaaaatcacataatttaatgtaattacaagtgtcggt 4298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 13203632 - 13203687
Alignment:
Q  28 tgatacgttaacatcactaataatttgagaaaatcacataatttactataattata 83  Q
    |||||||| |||| |||||||||||||||||||| |||||||| | | ||||||||    
T  13203632 tgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 20873077 - 20873124
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 20873124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 27213554 - 27213601
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    |||||||||| |||||||||||||||| ||| |||||||| |||||||    
T  27213554 ctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 33405435 - 33405388
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||| ||||||||||| | |||||||| ||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggt 33405388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 34897092 - 34897138
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcg 90  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 40332200 - 40332246
Alignment:
Q  46 aataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||| | | |||||| ||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggt 40332246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 3025558 - 3025603
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||||||||||||| | | |||||||| |||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 4948658 - 4948707
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  4948658 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 4948707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 8343323 - 8343368
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    |||||||||||| |||||||||||||||| | |||||| |||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 14134705 - 14134754
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||||||| | | ||||||||  |||||||    
T  14134705 actaataatttgagaaaatcacataattcagtgtaattatatatgtcggt 14134754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 20785517 - 20785472
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||| ||||||||||||||| | |||||||| |||||    
T  20785517 ctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 21465419 - 21465488
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| ||||||| ||||||   | |||||| |||||| ||| || |||||||||||||||||    
T  21465419 ctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacg 21465488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 28385045 - 28384976
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgt 114  Q
    ||||||| |||  ||||| ||||||| | | |||||||| |||||||| ||||||||||||| |||||||    
T  28385045 taataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgt 28384976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||| |||||||| | |||||||||| |||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 12606881 - 12606833
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||| |||||| | | |||||||| ||||||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggt 12606833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 25192399 - 25192351
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||| | |||||||| | |||||||||||||||||||    
T  25192399 ctaataatttgaaaaagtgacataattcagtataattataagtgtcggt 25192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 27067352 - 27067283
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||| |||||||||||| ||||||||  || |||||| ||||||| || || |||| ||||||||||||    
T  27067352 cactaatgatttgagaaaattacataatt--ctgtaattacaagtgtcagtgtcgtgtcggtgtcggacacg 27067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 3721100 - 3721148
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  3721100 ctaataatttgagaaaatcacataatttagtataattatatgtgtcggt 3721148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 11665493 - 11665423
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||| |||||||||||||| | | ||||||||||||||| | ||||||| |||||| |||||    
T  11665493 actaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacg 11665423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 24339649 - 24339718
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||||| || |||| ||||||||||||    
T  24339649 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 24339718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 11061128 - 11061080
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  11061128 ctaataatttgaaaaaatcacataatttagtataattacaagtgtcggt 11061080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 19206057 - 19206105
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  19206057 ctaataatttgagaaaatcacataattcattataattatatgtgtcggt 19206105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 7328743 - 7328652
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtc-----agtgtcggacacgtctaatccgaggagtgt 130  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||| || ||||      |||||||||||| ||||||||| ||||||    
T  7328743 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgt 7328652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 3991330 - 3991379
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||||||||    
T  3991330 actaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 3991379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 7438714 - 7438775
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtc 106  Q
    ||||||||||| |||||||||||||| | | |||||| |||||||||| ||||||| |||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtc 7438775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 9408385 - 9408317
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||||| || | || ||||| ||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacg 9408317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 15902830 - 15902898
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||||| |  |||| || |||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacg 15902898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 19992008 - 19992056
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||| || | | |||||||||||||||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggt 19992056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 24146823 - 24146871
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| |||||||||||||||| | |||||||||| ||||||||    
T  24146823 ctaataattttagaaaatcacataattcaatataattatatgtgtcggt 24146871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 14077486 - 14077439
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  14077486 ctaattatttgaaaaaataacataatttaatataattataagtgtcgg 14077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 14387514 - 14387467
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  14387514 ctaattatttgaaaaaataacataatttaatataattataagtgtcgg 14387467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 26033513 - 26033446
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggaca 111  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||||| || |||| ||||| ||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagaca 26033446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 27945046 - 27945105
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtca 101  Q
    |||||||||||||||||||| |||||||| | | |||||| |||||||||| || |||||    
T  27945046 cactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtca 27945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 35297723 - 35297680
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgt 88  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgt 35297680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 21880153 - 21880207
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||| |||||||||||||||||| |||||||| | | |||||| ||||||||||    
T  21880153 acatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggt 21880207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 9778510 - 9778555
Alignment:
Q  47 ataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||| |||||||||||||| | |||||||| ||||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggt 9778555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 32308127 - 32308196
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||||||||||||||||| | | ||||| || ||||| || || |||| |||| |||||||    
T  32308127 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacg 32308196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 1401032 - 1401080
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||| |||||||||| | | ||||||||||| |||||    
T  1401032 ctaataatttgagaaactcacataattcagtgtaattataagtatcggt 1401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 2334270 - 2334325
Alignment:
Q  57 aaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||| | |||||| |||||||||| || |||| ||||||||||||    
T  2334270 aaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacg 2334325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 4024033 - 4024081
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    ||||||||||| | ||||| |||||||||| ||||||||||||| ||||    
T  4024033 actaataatttaaaaaaatgacataatttaatataattataagtatcgg 4024081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 6028633 - 6028701
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| || || |||||||||| | |||||| || ||||||| || ||||||||||| |||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacg 6028701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 15680816 - 15680864
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||  | |||||||||||||||| | |||||||||||||||||    
T  15680816 ctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggt 15680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 20549798 - 20549846
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||| ||||| | | |||||||| ||||||||    
T  20549798 ctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggt 20549846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 27093465 - 27093417
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| |||||||||||||||||| | |||||||| | ||||||    
T  27093465 ctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggt 27093417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 27184836 - 27184884
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| |||||||||||||||||| | |||||||| | ||||||    
T  27184836 ctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggt 27184884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 27229350 - 27229294
Alignment:
Q  57 aaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||| | ||||||||||| ||||| || ||||| |||| ||||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacg 27229294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 21395359 - 21395292
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||||||||| |||||||||| | |||||| |||||||||| || ||||||||||||||||    
T  21395359 ctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 7086802 - 7086850
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  7086802 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggt 7086850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 16766704 - 16766772
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||||| || |||| |||||||||||    
T  16766704 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 4118384 - 4118317
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    ||||||||||| |||||||||||||| | | |||||| |||||| |||||  ||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacac 4118317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 9195806 - 9195737
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||| || |||  ||||| ||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacg 9195737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 9617442 - 9617511
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgt 114  Q
    |||||||||||||||||||||||||| | | |||||||| |||||||| || |  | |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggacacgt 9617511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 7265645 - 7265597
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||||    
T  7265645 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 7265597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 7938123 - 7938171
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  7938123 ctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggt 7938171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 9025546 - 9025498
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 9025498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 9107422 - 9107354
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||| ||||||||| |||| | | |||||| |||||||||| || |||| |||||||||||    
T  9107422 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 19044470 - 19044530
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagt 103  Q
    |||||||||||||||| ||||||||||| | | | |||||| |||||||| ||||||||||    
T  19044470 actaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtcatgtcagt 19044530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 5732561 - 5732514
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggt 5732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 10770727 - 10770668
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcag 102  Q
    ||||||||||||| |||||||||||||| | | |||||| |||||||||| || ||||||    
T  10770727 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcag 10770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 30866196 - 30866149
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    ||||||||||||||||||||||||||| | | |||||||| |||||||    
T  30866196 ctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 8805624 - 8805586
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattat 82  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  8805624 ctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 9629392 - 9629438
Alignment:
Q  46 aataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||| | | |||||||| ||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggt 9629438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 7569219 - 7569158
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtc 106  Q
    ||||||||||||||||| |||||||| | | |||||||| |||| ||| ||||||| |||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattataggtgttggtatcatgtctgtgtc 7569158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 15443696 - 15443741
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattata 83  Q
    |||||| ||||||||||||||||| |||||||| | ||||||||||    
T  15443696 acatcaataataatttgagaaaataacataattcaatataattata 15443741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 19040359 - 19040404
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||||||||||||| | | |||||||| |||||    
T  19040359 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 26562696 - 26562765
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||| |||||||||||||||||||||| | | |||||||| |||||| | || |||| |||||| |||||    
T  26562696 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacg 26562765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 34073406 - 34073337
Alignment:
Q  37 aacatcactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtc 106  Q
    |||||| ||||||||||||||||||| ||||||| | | |||||||| | |||||| || |||| |||||    
T  34073406 aacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 34595140 - 34595189
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  34595140 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 34595189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 5970159 - 5970091
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| |||||||||||||| | | |||||| || ||| ||| || |||| ||||||||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacg 5970091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 7377986 - 7378034
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||| |||||||||||||||||||||| | | |||||||| ||||||||    
T  7377986 ctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggt 7378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 7723302 - 7723212
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgt--cgg--acacgtctaatccgaggagtgt 130  Q
    |||||||||||||||||||| |||||| |  ||||||||| || ||||| || |||| ||||  |||  ||||| ||||||||||||||||    
T  7723302 ctaataatttgagaaaatcatataattcagcataattatatgtatcggtgtcgtgtcggtgttacggaaacacgcctaatccgaggagtgt 7723212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||| |||||||||||||| | | ||||||||||||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 17841641 - 17841593
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| | |||||| ||||| ||||    
T  17841641 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggt 17841593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 26178733 - 26178685
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| | |||| ||| ||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcggt 26178685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 32511718 - 32511674
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    |||||||||| |||||||||||||||| | | |||||||||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 33001341 - 33001293
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||||| ||||||||    
T  33001341 ctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggt 33001293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 34172200 - 34172248
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||| |||||||||||||||||||||| | || ||||||| ||||||||    
T  34172200 ctaacaatttgagaaaatcacataattaattaaaattatatgtgtcggt 34172248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 21051 - 21130
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgtctaatccgag 124  Q
    |||||||||||||||||||||||| |   |||||||||| |||||||| || |||| ||||| |||||| ||||||||||    
T  21051 taataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgag 21130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 21209 - 21263
Alignment:
Q  74 tataattataagtgtcggtttcatgtcagtgtcggacacgtctaatccgaggagt 128  Q
    |||||||||| |||||||| || |||| ||||| |||||| ||||||||||||||    
T  21209 tataattatatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagt 21263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 44482240 - 44482306
Alignment:
Q  47 ataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||||||||| | | |||||||| |||||||| || |||| ||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 44482306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 7918269 - 7918218
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||||||||||||||||||| | | |||||||| |||||    
T  7918269 acatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 21530697 - 21530744
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||    
T  21530697 taataatttgagaaaatcatataatttggtataattataagtgtcggt 21530744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 25272494 - 25272537
Alignment:
Q  49 aatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggt 25272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 25361891 - 25361962
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||| |||||||||||||||||||||||| | | |||||||| ||||| || || |||| ||||||||||||    
T  25361891 cactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacg 25361962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 14332696 - 14332646
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||||||| | |||||||| || |||||    
T  14332696 cactaataatttgagaaaatcacataatttagtgtaattatatgtctcggt 14332646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 22881669 - 22881620
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  22881669 actaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 22881620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 1486761 - 1486713
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||||||||||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggt 1486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 22515939 - 22515891
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  22515939 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 22515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 36878468 - 36878516
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||||||    
T  36878468 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcggt 36878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 41877522 - 41877474
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  41877522 ctaataatttgagaaaattacataatttagtgtaattacaagtgtcggt 41877474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 47989505 - 47989573
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||| | |||||||||||||| | | |||||| |||||||||| || |||| ||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 47989573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 1864931 - 1864884
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||||| | | |||||||| ||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggt 1864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 9828049 - 9828120
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||| |||||||||||||| | | ||||| || |||||||| || |||| ||||| ||||||    
T  9828049 cactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacg 9828120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 22907390 - 22907343
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||| | |||||||  |||||||||||||||||||    
T  22907390 taataatttgagaaaattatataatttggtataattataagtgtcggt 22907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 31015050 - 31015097
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcgg 91  Q
    ||||||||||||||||||||||||||| | | |||||| |||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 31694749 - 31694694
Alignment:
Q  57 aaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||||| | |||||||| |||||||||| || |||| |||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 6427357 - 6427415
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcag 102  Q
    ||||||||||||||||||||||||||| | | |||||||| |||| ||| || ||||||    
T  6427357 ctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtcag 6427415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 12713381 - 12713311
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||| |||||||||||||||||| | |||||||| || | ||| | ||||| |||||| ||||    
T  12713381 cactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacac 12713311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 12717472 - 12717402
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||| |||||||||||||||||| | |||||||| || | ||| | ||||| |||||| ||||    
T  12717472 cactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacac 12717402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 32461516 - 32461447
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||| |||||||||||||||| | |||||| |||||| ||| |  |||| ||||||||||||    
T  32461516 actaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacg 32461447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 1262891 - 1262928
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataatta 81  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  1262891 ctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 5376552 - 5376483
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||| ||||||| |||||||| | | |||||| |||||||||| || ||||  |||||||||||    
T  5376552 ctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 9629952 - 9629883
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| ||||||| |||||| | | | ||||||||||||||| || ||||  |||||||||||    
T  9629952 ctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacg 9629883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 24577239 - 24577190
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  24577239 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 24577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 34298441 - 34298482
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattata 83  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  34298441 cactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 34712435 - 34712390
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||    
T  34712435 ctaataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 35999375 - 35999330
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  35999375 actaataatttaagaaaatcatataatttagtataattatatgtgt 35999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 6612222 - 6612154
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| ||||| |||||||| | | |||||| |||||||||| || ||||  |||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacg 6612154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 9709827 - 9709875
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||||||   | |||||||| ||||||||    
T  9709827 ctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggt 9709875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 10233253 - 10233305
Alignment:
Q  37 aacatcactaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    |||| ||||||||| ||||||||||||||||||| | | |||||||| |||||    
T  10233253 aacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 10572643 - 10572615
Alignment:
Q  42 cactaataatttgagaaaatcacataatt 70  Q
    |||||||||||||||||||||||||||||    
T  10572643 cactaataatttgagaaaatcacataatt 10572615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 15323171 - 15323215
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||| |||||||||||||||| | ||||| ||||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 19977215 - 19977151
Alignment:
Q  160 cctctaacaccagcattattgatcaacgcatcaatatgtccaaaagcctcccatgccttctgcac 224  Q
    ||||||||||||||||| || ||||| | ||||||||| ||||| || ||||| ||||| |||||    
T  19977215 cctctaacaccagcattgttaatcaatgtatcaatatgcccaaaggcatcccacgccttatgcac 19977151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 38078713 - 38078665
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  38078713 ctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggt 38078665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 39953198 - 39953150
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| |||||||||||||||||| | ||||| || ||||||||    
T  39953198 ctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggt 39953150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 40181878 - 40181926
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | | |||||||| || |||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggt 40181926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 46348435 - 46348387
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||||||| |||||||| | |||||| ||||||||||    
T  46348435 ctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggt 46348387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 53189 - 53254
Alignment:
Q  46 aataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggaca 111  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||  | |||| ||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggaca 53254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 3415062 - 3415014
Alignment:
Q  24 atattgatacgttaacatcactaataatttgagaaaatcacataattta 72  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  3415062 atattgatacgttaacattgctaataatttgaaaaaatcacataattta 3415014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 18420486 - 18420438
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||||||||||| | |  ||||||||||||||||    
T  18420486 ctaataatttgagaaaatcacataattcaatgcaattataagtgtcggt 18420438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 2665948 - 2665901
Alignment:
Q  36 taacatcactaataatttgagaaaatcacataatttactataattata 83  Q
    ||||| |||||||||||| |||||||||||||||||| | ||||||||    
T  2665948 taacaccactaataattttagaaaatcacataatttagtgtaattata 2665901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 30527646 - 30527599
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||| |||||||| | |||||||| ||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 5367197 - 5367247
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||| ||||||||||||| | | |||||||| ||||||||    
T  5367197 cactaataatttgaggaaatcacataattcagtgtaattatatgtgtcggt 5367247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 12668481 - 12668427
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||| ||||||||||||| ||||| |||||||| | | |||||||||||||||||    
T  12668481 acataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggt 12668427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 34785023 - 34784965
Alignment:
Q  55 agaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||| | |||||||| |||||||| || |||| || |||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacg 34784965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 11223915 - 11223846
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||| ||||| ||||| |||||||| | | |||||| |||||||||| ||||||  ||||||||||||    
T  11223915 ctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacg 11223846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 30717582 - 30717513
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||| | || ||||  |||||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg 30717513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 36756397 - 36756328
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||||||||||||  |||| |||||||| | | ||||||||||||||||| || ||| ||||||| ||||    
T  36756397 actaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacac 36756328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 38442313 - 38442362
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||| |||| | |||||||||||||| | |||||||||||||||||||    
T  38442313 actaatgatttaaaaaaatcacataattcaatataattataagtgtcggt 38442362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 44860327 - 44860396
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||||||||| ||||||| | | |||||||| |||||||| || |||  |||| |||||||    
T  44860327 ctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacg 44860396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 2331802 - 2331863
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcgg 108  Q
    |||||||||||||||||||||||||| | | || ||||  |||||||| || ||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgtatttat--gtgtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 18889643 - 18889575
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    ||||||| ||||||||||||||||||| | | |||| ||| |||||||| || |||  |||||||||||    
T  18889643 ctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 20539726 - 20539678
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||||||| |||||||| | |||||| ||||||||||    
T  20539726 ctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggt 20539678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 21616769 - 21616813
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||||||||||||||||||| | | |||||||| ||||    
T  21616769 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 23718033 - 23718081
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||| |||||||||| | | |||||||| ||||||||    
T  23718033 ctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggt 23718081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 24105705 - 24105753
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||| |||||||||| | | |||||||| ||||||||    
T  24105705 ctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggt 24105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 31018597 - 31018645
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| |||||||||||| ||||| | |||||||| ||||||||    
T  31018597 ctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggt 31018645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 36281693 - 36281761
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||||||||||||||||||| | |||| ||| || ||| | |  |||| ||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggacacg 36281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 36409676 - 36409611
Alignment:
Q  47 ataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgt 114  Q
    ||||||||| |||||||||||||||| | |||||||  |||||||| ||||||  ||||| |||||||    
T  36409676 ataatttgaaaaaatcacataatttagtgtaattat--gtgtcggtgtcatgttggtgtctgacacgt 36409611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 39026825 - 39026873
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||| |||||||||||||||| |||| | ||||||||| |||||||    
T  39026825 ctaataacttgagaaaatcacatattttaatgtaattataaatgtcggt 39026873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 42832328 - 42832280
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||| ||||| || | | |||||||||||||||||    
T  42832328 ctaataatttgagaaaattacatatttcagtgtaattataagtgtcggt 42832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 1652 - 1699
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||    
T  1652 taataatttgagaaaatcatataatttggtataattataagtgtcggt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 25819 - 25772
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggt 25772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 20179 - 20261
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacgtctaatccgaggagt 128  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||| || || |||| |||  ||||||| ||||||||||||||    
T  20179 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagt 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 17802 - 17753
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  17802 actaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 17753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 263424 - 263355
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||||||| ||||||||| | | |||||||||||||| || || |||| ||||| ||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacg 263355  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 241601 - 241670
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    |||||||||||  |||||||||||||||| | ||||||| ||||||||| || |||  ||||||||||||    
T  241601 ctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacg 241670  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 49505206 - 49505161
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 55401081 - 55401130
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  55401081 actaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 55401130  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 1509546 - 1509594
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggt 1509594  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 8383264 - 8383312
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||| |||||| | | |||||||||||||||||    
T  8383264 ctaataatttgagaaaatcatataattcagtgtaattataagtgtcggt 8383312  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 11313852 - 11313808
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 21257038 - 21256990
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | |||||||| ||||||||||    
T  21257038 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 32804591 - 32804547
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    |||||||||||||||||||||||||||| | |||||||| |||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

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Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 49651838 - 49651790
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| ||| |||||| ||||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggt 49651790  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 8039887 - 8039820
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggaca 111  Q
    |||||||||||||||||| | |||||| | | |||||||| |||||||| || |||| ||||||||||    
T  8039887 ctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

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Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 17005678 - 17005623
Alignment:
Q  37 aacatcactaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||| |||||||||||||| ||||||| |||||| | | |||||||||||||||||    
T  17005678 aacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggt 17005623  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 39756244 - 39756291
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||| | |||||||||||||||| |||||||| ||||||||||    
T  39756244 taataatttaaaaaaatcacataatttaatataattacaagtgtcggt 39756291  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 14209119 - 14209189
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||| | |||||||||||||| | | |||||| ||||||| || || |||| ||||||||||||    
T  14209119 actaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacg 14209189  T

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Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 16789020 - 16789086
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggaca 111  Q
    ||||||||| | ||||||| |||||| | | ||||||||||||| ||| || |||||||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggaca 16789086  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 27277890 - 27277852
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattat 82  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  27277890 ctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 34307832 - 34307786
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcg 90  Q
    |||||||||||||||||||||||| || | | |||||||||||||||    
T  34307832 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 1438805 - 1438850
Alignment:
Q  38 acatcactaataatttgagaaaatcacataatttactataattata 83  Q
    ||||| |||| |||||||||||||||||||||| | ||||||||||    
T  1438805 acatcgctaacaatttgagaaaatcacataattcagtataattata 1438850  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 7928457 - 7928505
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||||| ||||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggt 7928505  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 10268537 - 10268493
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||    
T  10268537 taataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 11665951 - 11665999
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| ||||||||| |||||| | |||||||| ||||||||    
T  11665951 ctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggt 11665999  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 24633771 - 24633799
Alignment:
Q  42 cactaataatttgagaaaatcacataatt 70  Q
    |||||||||||||||||||||||||||||    
T  24633771 cactaataatttgagaaaatcacataatt 24633799  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 25948939 - 25948895
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    |||||||||||| |||||||||||||| | | |||||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 26508117 - 26508165
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  26508117 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26508165  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 28678310 - 28678358
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||| | |||||||||||||||| ||||||| || ||||||||    
T  28678310 ctaataatttaataaaatcacataatttagtataattgtatgtgtcggt 28678358  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 28918008 - 28918056
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 28918056  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 34910323 - 34910391
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggaca 111  Q
    ||||||||||||| |||||||||||||| | | |||||| ||| |||||| || | || ||||||||||    
T  34910323 actaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggaca 34910391  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 45451560 - 45451608
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||| || | |||||| ||| ||||||||    
T  45451560 ctaataatttgagaaaatcacatacttcagtataataatatgtgtcggt 45451608  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 48202320 - 48202276
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||| |||||||||||||||||||||| | |||||||| |||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtgtc 48202276  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 44577 - 44509
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacac 112  Q
    |||| |||||||||||||||||||||| | | |||||||| |||||||| || |||| |||| ||||||    
T  44577 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacac 44509  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 68293 - 68249
Alignment:
Q  45 taataatttgagaaaatcacataatttactataattataagtgtc 89  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  68293 taataatttgagaaaatcatataatttagtataattataggtgtc 68249  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 9801 - 9730
Alignment:
Q  42 cactaataatttgagaaaatcacataatttactataattataagtgtcggtttcatgtcagtgtcggacacg 113  Q
    ||||||||||||||||||||||| ||||| | | |||||||| |||||||| || |||  ||||| ||||||    
T  9801 cactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacg 9730  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 7364 - 7319
Alignment:
Q  43 actaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    ||||||||||||  |||||||||||||||| | |||||||||||||    
T  7364 actaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 7084 - 7040
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgt 88  Q
    |||||||||||| ||||| |||||||||| |||||||| ||||||    
T  7084 ctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 8673 - 8721
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    ||||||||||  |||||||||||| || | |||||||||||||||||||    
T  8673 ctaataatttaggaaaatcacatagttcagtataattataagtgtcggt 8721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 26398 - 26426
Alignment:
Q  42 cactaataatttgagaaaatcacataatt 70  Q
    |||||||||||||||||||||||||||||    
T  26398 cactaataatttgagaaaatcacataatt 26426  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 135364 - 135316
Alignment:
Q  44 ctaataatttgagaaaatcacataatttactataattataagtgtcggt 92  Q
    |||||||||||||||||||||||||||   | |||||||| ||||||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggt 135316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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