View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12315_high_7 (Length: 349)
Name: NF12315_high_7
Description: NF12315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12315_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 6959589 - 6959911
Alignment:
| Q |
13 |
tgtgctcattttctggaatgatattttcttttagcccaccttttttcttccataaaacagtttgggaataggtgtaacagtaatggataacactgtaaat |
112 |
Q |
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| T |
6959589 |
tgtgctcattttctggaatgatattttcttttagcccaccttttttcttccataaaacagtttgggaataggtgtaacagtaatggataacactgtaaat |
6959688 |
T |
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| Q |
113 |
tgctagtgaacataattcagaactctaatataaacaagaccatgtagtcaatgtgtattgaatactttgccttctaccctaattaacctcttagtctcgg |
212 |
Q |
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| T |
6959689 |
tgctagtgaacataattcagaactctaatataaacaagaccatgtagtcaatgtgtattgaatactttgccttctaccctaattaacctcttagtctcgg |
6959788 |
T |
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| Q |
213 |
tcgatatctgaaccgtgaggagatattcgatgacaaacaaaatgtttaaaaataaataaataatgggcatgattcattagtaaaaacactggtttaaaaa |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6959789 |
tcgatatctgaaccgtgaggagatattcgatgacaaacaaaatgtttaaaaataaataaataatgggcatgattcattagtaaaaacactggtttaaaaa |
6959888 |
T |
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| Q |
313 |
gaaggaaaatatgatgtggtttt |
335 |
Q |
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| T |
6959889 |
gaaggaaaatatgatgtggtttt |
6959911 |
T |
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