View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12315_low_10 (Length: 282)

Name: NF12315_low_10
Description: NF12315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12315_low_10
NF12315_low_10
[»] chr7 (11 HSPs)
chr7 (14-282)||(6934245-6934513)
chr7 (14-282)||(28095150-28095418)
chr7 (162-282)||(33625522-33625642)
chr7 (162-282)||(46043723-46043843)
chr7 (162-282)||(15131444-15131564)
chr7 (162-282)||(45958164-45958284)
chr7 (162-282)||(43083453-43083573)
chr7 (162-282)||(44167200-44167320)
chr7 (162-281)||(38199619-38199738)
chr7 (162-282)||(3496233-3496352)
chr7 (169-282)||(46331483-46331595)
[»] chr4 (12 HSPs)
chr4 (14-282)||(510307-510575)
chr4 (14-282)||(18087362-18087630)
chr4 (162-282)||(31317671-31317791)
chr4 (162-282)||(11670684-11670804)
chr4 (162-282)||(44208935-44209055)
chr4 (162-281)||(25243718-25243837)
chr4 (162-282)||(33688734-33688854)
chr4 (168-270)||(35055190-35055292)
chr4 (162-282)||(10322433-10322552)
chr4 (162-282)||(53571134-53571254)
chr4 (162-282)||(25422800-25422920)
chr4 (162-199)||(53569281-53569318)
[»] chr1 (10 HSPs)
chr1 (124-282)||(17451888-17452046)
chr1 (162-282)||(36248913-36249033)
chr1 (162-282)||(12367828-12367948)
chr1 (162-271)||(46596213-46596322)
chr1 (162-282)||(15054242-15054362)
chr1 (162-282)||(37986334-37986454)
chr1 (162-268)||(36362537-36362643)
chr1 (162-282)||(29231692-29231812)
chr1 (162-282)||(33708379-33708499)
chr1 (162-282)||(30981808-30981928)
[»] chr3 (12 HSPs)
chr3 (162-282)||(37179683-37179803)
chr3 (162-282)||(117049-117169)
chr3 (162-282)||(27868128-27868248)
chr3 (162-282)||(44557218-44557338)
chr3 (162-282)||(45234777-45234897)
chr3 (162-282)||(50614671-50614789)
chr3 (166-282)||(32147715-32147831)
chr3 (162-281)||(32943727-32943846)
chr3 (170-267)||(44555496-44555593)
chr3 (162-282)||(1430018-1430138)
chr3 (183-272)||(53440043-53440132)
chr3 (183-272)||(53397821-53397911)
[»] chr8 (8 HSPs)
chr8 (165-282)||(39337568-39337685)
chr8 (162-282)||(21136060-21136178)
chr8 (162-282)||(36062864-36062983)
chr8 (162-282)||(37706195-37706314)
chr8 (162-282)||(13323243-13323360)
chr8 (162-282)||(35863776-35863896)
chr8 (162-282)||(24452217-24452336)
chr8 (162-282)||(16478288-16478408)
[»] chr2 (8 HSPs)
chr2 (162-282)||(42487113-42487233)
chr2 (162-282)||(20718996-20719116)
chr2 (162-281)||(44493616-44493735)
chr2 (162-282)||(20720665-20720785)
chr2 (169-282)||(21439428-21439541)
chr2 (162-282)||(18672927-18673047)
chr2 (162-262)||(43932203-43932303)
chr2 (54-92)||(25124964-25125002)
[»] scaffold0651 (1 HSPs)
scaffold0651 (162-282)||(5879-5999)
[»] scaffold0097 (2 HSPs)
scaffold0097 (162-282)||(22833-22953)
scaffold0097 (162-282)||(24503-24623)
[»] scaffold0003 (1 HSPs)
scaffold0003 (162-282)||(239617-239736)
[»] chr5 (5 HSPs)
chr5 (162-282)||(41139763-41139883)
chr5 (162-282)||(43440308-43440428)
chr5 (165-282)||(38692044-38692161)
chr5 (162-278)||(13920763-13920878)
chr5 (164-204)||(26865359-26865399)
[»] scaffold0385 (1 HSPs)
scaffold0385 (167-282)||(9554-9669)
[»] chr6 (3 HSPs)
chr6 (172-282)||(17246152-17246262)
chr6 (162-270)||(22971915-22972023)
chr6 (162-270)||(23816375-23816483)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-279)||(172020-172249)


Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 6934245 - 6934513
Alignment:
Q  14 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6934245 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacg 6934344  T
Q  114 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6934345 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttggttcgaattaatatggaattattttcccacgc 6934444  T
Q  214 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6934445 tcattcaatattttgcccctggttaatgatattaggttctactcaaataatctatgccgcttcaacatc 6934513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 28095418 - 28095150
Alignment:
Q  14 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  28095418 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctatcaaatcgccgattttacccttacatacatggttaccagatacccacg 28095319  T
Q  114 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgc 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  28095318 gagaggcacattacagcatttgtatgcttttagccagaatcttattaaaaatgggagcatatgggttagttcaaattaatatggaattattttcccacgc 28095219  T
Q  214 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28095218 tcattcaatattttgcccctggttaatgatattaggttctaatcaaataatctatgccgcttcaacatc 28095150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 33625642 - 33625522
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33625642 aaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 33625543  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| ||||||| |||||||||    
T  33625542 aatttatgccgattcaacatc 33625522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 46043723 - 46043843
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46043723 aaatgggagcatataagttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 46043822  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  46043823 aatctatgccgattcaacatc 46043843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 15131564 - 15131444
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  15131564 aaatgggagcatatgggttggttcaaattaatatggaattattttcccacgctcattcaatattttgtccctagttaatgatattaggttctattcaaat 15131465  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  15131464 aatctatgccgattcaacatc 15131444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 45958164 - 45958284
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45958164 aaatgggagcatatgggttggttcgaattaatatggaattatttttccacgctcattcaatattttgcctctggttaatgatattaggttctattcaaat 45958263  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||| | |||||||||    
T  45958264 aatctatgctgattcaacatc 45958284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 43083453 - 43083573
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  43083453 aaatgggagcatatgggttgattcgaattaatatggaattatttttccacacccattcaatagtttgcccctggttaatgatattaggttctactcaaat 43083552  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||| ||||||||||||||    
T  43083553 aatctacgccgcttcaacatc 43083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 44167200 - 44167320
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||| ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44167200 aaatggaagcatgtgggttggttcgaattaatatcgaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 44167299  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| ||||||| |||||||||    
T  44167300 aatttatgccgattcaacatc 44167320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 38199738 - 38199619
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  38199738 aaatgggagcatatgagttgatttgaattaatatggaattattttctcacgctcattcaatattttgctcttggttaatgatattaggttctactcaaat 38199639  T
Q  262 aatctatgccgcttcaacat 281  Q
    ||||||||| ||||||||||    
T  38199638 aatctatgctgcttcaacat 38199619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 3496352 - 3496233
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatat-taggttctattcaaa 260  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |    
T  3496352 aaatgggagcatatgagttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatatctaggttctactc--a 3496255  T
Q  261 taatctatgccgcttcaacatc 282  Q
    ||||||||| ||||||||||||    
T  3496254 taatctatgtcgcttcaacatc 3496233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 46331595 - 46331483
Alignment:
Q  169 agcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatctat 268  Q
    ||||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46331595 agcatgtgggttggttcgaattaatatggaattattttcccaca-tcattcaatattttgcccctgattaatgatattaggttctattcaaataatctat 46331497  T
Q  269 gccgcttcaacatc 282  Q
    |||| || ||||||    
T  46331496 gccgatttaacatc 46331483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 510307 - 510575
Alignment:
Q  14 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  510307 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccggatacccacg 510406  T
Q  114 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  510407 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttggttcgaattaatatggaattattttcccacgc 510506  T
Q  214 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  510507 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 510575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 18087630 - 18087362
Alignment:
Q  14 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18087630 cctgtggcgctagaaataatattatatacggcatttcttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccggatacccacg 18087531  T
Q  114 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18087530 gagaggcacattacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttggttcgaattaatatggaattattttcccacgc 18087431  T
Q  214 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18087430 tcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 18087362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 31317791 - 31317671
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31317791 aaatgggaggatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctcgttaatgatattaggttctattcaaat 31317692  T
Q  262 aatctatgccgcttcaacatc 282  Q
    || |||||||| |||||||||    
T  31317691 aaactatgccgattcaacatc 31317671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 11670804 - 11670684
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11670804 aaatgggagcatatgggttggttcgaagtaatatggaattattttccaacgctcattcaatattttgctcctggttaatgatattaggttctactcaaat 11670705  T
Q  262 aatctatgccgcttcaacatc 282  Q
    | |||||||||||||||||||    
T  11670704 agtctatgccgcttcaacatc 11670684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 44208935 - 44209055
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  44208935 aaatgggagcatatgggttggtccgaattaatatggaattattttcccacgctcgttcaatatttttcccctggttaatgatattatgttctattcaaat 44209034  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  44209035 aatctatgccgattcaacatc 44209055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 25243837 - 25243718
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25243837 aaattggagcatatgggttggttcgaattaatatggaattattttcccatgctcattcaatattttgcccatggttaatgatattaggttctattcaaat 25243738  T
Q  262 aatctatgccgcttcaacat 281  Q
    ||||||| ||| ||||||||    
T  25243737 aatctataccgattcaacat 25243718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 33688734 - 33688854
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  33688734 aaatgggagcatatgacttgattcgaattaatatggaattattttccatagcttattcaatattttgcccctggttaatgatattaggttctatttaaat 33688833  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  33688834 aatctatgccgattcaacatc 33688854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 35055190 - 35055292
Alignment:
Q  168 gagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatcta 267  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  35055190 gagcttatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctcgttgatgatattaggttctattcaaataatcta 35055289  T
Q  268 tgc 270  Q
    |||    
T  35055290 tgc 35055292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 10322552 - 10322433
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||| ||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10322552 aaataggagcatgtgggttggttcgaattaatatgaaat-attttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 10322454  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| | ||||| |||||||||    
T  10322453 aatttgtgccgattcaacatc 10322433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 53571134 - 53571254
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||| ||||||| ||||||    
T  53571134 aaatgggagcatatgagttggttcgaattaatatggaattattttctcacgttcattcaatattttgccccagattaatgatatttggttctactcaaat 53571233  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| ||||||||||||    
T  53571234 aatctatgtcgcttcaacatc 53571254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 25422920 - 25422800
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||| ||||    
T  25422920 aaatgggagcatatggattggttcgaattaatatggaattattttcccactctcattcaatatttttcccctcgttaatgatattaagttctatttaaat 25422821  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| ||||| | |||||||||    
T  25422820 aatttatgctgattcaacatc 25422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 53569281 - 53569318
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaa 199  Q
    |||||||||||||||||||| |||||||||||||||||    
T  53569281 aaatgggagcatatgggttggttcgaattaatatggaa 53569318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 6e-80; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 124 - 282
Target Start/End: Complemental strand, 17452046 - 17451888
Alignment:
Q  124 ttacagcacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17452046 ttacaacacttgtatgcttttagccggaatcttattaaaaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctcattcaata 17451947  T
Q  224 ttttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17451946 ttttgcccctggttaatgatattaggttctattcaaataatctatgccgcttcaacatc 17451888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 36249033 - 36248913
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36249033 aaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctactcaaat 36248934  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  36248933 aatctatgccgcttcaacatc 36248913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 12367828 - 12367948
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12367828 aaatgggagcatatgagttggttcgaattaatatggaattattttcccccgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 12367927  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  12367928 aatctatgccgcttcaacatc 12367948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 46596213 - 46596322
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46596213 aaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccatggttaatgatattaggttctattcaaat 46596312  T
Q  262 aatctatgcc 271  Q
    ||||||||||    
T  46596313 aatctatgcc 46596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 15054362 - 15054242
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  15054362 aaatgggagcatatgagttggttcgaattaatatggaattatttttccacgctcattcaatattttgcccttggttaatgatattgggttctactcaaat 15054263  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  15054262 aatctatgccgcttcaacatc 15054242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 37986334 - 37986454
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  37986334 aaatgagagcatatgggttggttcgaattaatatggacttatttttccacgctcattcaatattttgcccctggttaatgatattaggttccactcaaat 37986433  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| ||||||||||||    
T  37986434 aatctatgtcgcttcaacatc 37986454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 36362537 - 36362643
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  36362537 aaatgggagcatatgggttggttcgaattaatatgaaattattttcccacgctcatttaatattttggccctggttaatgatattaggttctattcaaat 36362636  T
Q  262 aatctat 268  Q
    |||||||    
T  36362637 aatctat 36362643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 29231812 - 29231692
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||| || ||||||    
T  29231812 aaatgggagcatatgggttggttcgaattaatatgaaattatttttccacactcattcaatattttgcctctggttaatgatattaggttatactcaaat 29231713  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| ||||||||||||    
T  29231712 aatctatgtcgcttcaacatc 29231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 33708379 - 33708499
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  33708379 aaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctcattcaatatttttcccttggttaatgatatcaggttctgttcaaat 33708478  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| |||| || |||||||||    
T  33708479 aatatatgtcgattcaacatc 33708499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 30981808 - 30981928
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||| ||| ||||||||||||||||||||| | ||||| || |||||||||||||||| |||||||||||||||||||||||||||||    
T  30981808 aaatgggagcatatggattggttcgaattaatatggaattatctacccacacttattcaatattttgcccttggttaatgatattaggttctattcaaat 30981907  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||  | |||||||||    
T  30981908 aatctatgttgattcaacatc 30981928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 37179803 - 37179683
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37179803 aaatgggagcatatgggttggttcgaattaatatggaattattttcccacgctctttcaatattttgcccctggttaatgatattaggttctattcaaat 37179704  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  37179703 aatctatgccgattcaacatc 37179683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 117049 - 117169
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  117049 aaattggagcatatgggttggttcgaattaatatggaattatttttccacgctcattcaatattttgcccctggttaatgatattaggttctactcaaat 117148  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  117149 aatctatgccgcttcaacatc 117169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 27868128 - 27868248
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27868128 aaatgggagcatatgggttggttcgaattaatatgaaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 27868227  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| || |||||||||    
T  27868228 aatctatgtcgtttcaacatc 27868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 44557218 - 44557338
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44557218 aaatgggagcatatgggttggttcgaattaatatggaattatttttccacgctcattcaatattttgcccctagttaatgatattaggttctactcaaat 44557317  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||  |||||||||||    
T  44557318 aatctatgttgcttcaacatc 44557338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 45234777 - 45234897
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  45234777 aaatgggagcttatgggttggttcgaattaatatgaaattattttcccacgctcattcaatattttgcccctagttaatggtatttggttctattcaaat 45234876  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  45234877 aatctatgccgattcaacatc 45234897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 50614671 - 50614789
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||  ||||||    
T  50614671 aaatggaagcatatgggttggttcgaattaatatggaattatttttccacgcccattcaatattttgcccctggtta--gatattaggttctgctcaaat 50614768  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  50614769 aatctatgccgcttcaacatc 50614789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 32147831 - 32147715
Alignment:
Q  166 gggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatc 265  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||| |||| |||||||||||||    
T  32147831 gggagcatatgggttggttcgaattaatatggaattatttttccacgttcattcaatatttttcccctgcttaatgatattgggttttattcaaataatc 32147732  T
Q  266 tatgccgcttcaacatc 282  Q
    ||||||| |||||||||    
T  32147731 tatgccgattcaacatc 32147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 32943846 - 32943727
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  32943846 aaatgggagcatatgggttggttctaatcaatatggaattatttttccacgctcattcaatattttttccttggttaatgatattaggttctattcaaat 32943747  T
Q  262 aatctatgccgcttcaacat 281  Q
    ||| ||||||| ||||||||    
T  32943746 aatttatgccgattcaacat 32943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 44555496 - 44555593
Alignment:
Q  170 gcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatcta 267  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44555496 gcatatgggttggtttgaattaatatagaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctactcaaacaatcta 44555593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 1430138 - 1430018
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||| ||||||||| |||| ||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1430138 aaatgagagcatatgagttggttcaaattaatatgaaattattttcccacgcttattcagtattttgcccctggttaatgatattaggttctattcaaat 1430039  T
Q  262 aatctatgccgcttcaacatc 282  Q
     | |||||| | |||||||||    
T  1430038 gacctatgctgattcaacatc 1430018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 53440132 - 53440043
Alignment:
Q  183 ttcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgccg 272  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  53440132 ttcgaattaatatgaaattattttcccacgctcatttgatattttgcctctggttaatgatattaggttatattcaaataatctatgccg 53440043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 53397911 - 53397821
Alignment:
Q  183 ttcgaattaatatggaattattttcccacgctcattcaatatttt-gcccctggttaatgatattaggttctattcaaataatctatgccg 272  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  53397911 ttcgaattaatatgaaattattttcccacgatcatttaatatttttgcccttggttaatgatattaggttatattcaaataatctatgccg 53397821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 39337685 - 39337568
Alignment:
Q  165 tgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataat 264  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39337685 tgggagcatatgggttggttcgaaataatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctactcaaataat 39337586  T
Q  265 ctatgccgcttcaacatc 282  Q
    ||||||||||||||||||    
T  39337585 ctatgccgcttcaacatc 39337568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 21136178 - 21136060
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||  | |||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21136178 aaatgggagcat--gagttgtttcgaattaatatggaattattttcccacactcattcaatatttttcccctggttaatgatattaggttctattcaaat 21136081  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  21136080 aatctatgccgattcaacatc 21136060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 36062864 - 36062983
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  36062864 aaatggaagcatatgggttggtttgaattaatatggaattattttcccacgctcattcaatatttt-tccctggttaatgatattatgttctattcaaat 36062962  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  36062963 aatctatgccgattcaacatc 36062983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 37706195 - 37706314
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  37706195 aaatgggaacatatgggttggttcgaattaatatggaattattttcccacgctcgttcaatatttttcccctgattaatgatattaggttctattcaaat 37706294  T
Q  262 aatctatgccgcttcaacatc 282  Q
     |||||||||| |||||||||    
T  37706295 -atctatgccgattcaacatc 37706314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 13323243 - 13323360
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||    
T  13323243 aaatgagagcatatgggttggatcgaattaatatggaattattttcccacgctcattcaatatttttcccctggttaatgatat---gttctattcaaat 13323339  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  13323340 aatctatgccgattcaacatc 13323360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 35863896 - 35863776
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||| ||||||||| | ||||||||||||||| |||||||||||    
T  35863896 aaatgggagcatatgtgttggttcgaattaatatagaattattttcccacgcttattcaaaattttgcccatagttaatgatattaggctctattcaaat 35863797  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  35863796 aatctatgccgattcaacatc 35863776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 24452336 - 24452217
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24452336 aaattggagcatataggttggttcgaattaatatggaattattt-cccacactcattcaatatttttcccctcgttaatgatattaggttctattcaaat 24452238  T
Q  262 aatctatgccgcttcaacatc 282  Q
     |||||||||| |||||||||    
T  24452237 catctatgccgattcaacatc 24452217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 16478408 - 16478288
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||| ||||||||||||| ||| ||||||||||||||| ||||||||| || ||||||||||||||| || |||||||||||||||||||||||||||    
T  16478408 aaatggaagcatatgggttggttcaaattaatatggaatttttttcccacacttattcaatattttgccactagttaatgatattaggttctattcaaat 16478309  T
Q  262 aatctatgccgcttcaacatc 282  Q
    | | ||||||| |||||||||    
T  16478308 agtatatgccgattcaacatc 16478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 42487113 - 42487233
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42487113 aaatgggagcatatgggttggttcgaattaatatgtaattattttcccacgctcattcaatattttgccactggttaatgatattaggttctattcaaat 42487212  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  42487213 aatctatgccgattcaacatc 42487233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 20718996 - 20719116
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  20718996 aaatgggagcatatgggttggttcgaattaatatggaattattttcccactctcattcaatattttgcccctggataatgatattaggttctactcaaat 20719095  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| ||||||||||||    
T  20719096 aatctatgtcgcttcaacatc 20719116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 44493735 - 44493616
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44493735 aaatgggagcatatgggttggttcgaattaatatggaattattttcccatgctcattcaatattttacccctggttaatgatattaggttctattcaaat 44493636  T
Q  262 aatctatgccgcttcaacat 281  Q
    |||||||| || ||||||||    
T  44493635 aatctatgtcgattcaacat 44493616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 20720785 - 20720665
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||| |||||||||||||    
T  20720785 aaatgggagcatatgggttggttcgaattaatatggaattattttcccatggtcattcaatattttgcccctagttaattatattaagttctattcaaat 20720686  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  20720685 aatctatgccgattcaacatc 20720665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 21439428 - 21439541
Alignment:
Q  169 agcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatctat 268  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  21439428 agcatatgggttggttcaaattaatatggaattatttacccacgctcattcaatattttgcccatggttaatgatattaggttctactcaaataatatat 21439527  T
Q  269 gccgcttcaacatc 282  Q
    ||||||||||||||    
T  21439528 gccgcttcaacatc 21439541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 18673047 - 18672927
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  18673047 aaatggaagcatatgagttgatttaaattaatatggaattattttccaacgctcattcaatattttgtctctggttaatgatattaggttctattcaaat 18672948  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  18672947 aatctatgccgattcaacatc 18672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 43932203 - 43932303
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  43932203 aaatgggaacatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaataatattaagttctattcaaat 43932302  T
Q  262 a 262  Q
    |    
T  43932303 a 43932303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 25124964 - 25125002
Alignment:
Q  54 ttgcttttgctgtcaaatcgccgattatacccttacata 92  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25124964 ttgcttttgctctcaaatcgccgattatacccttacata 25125002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 5879 - 5999
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5879 aaatgggaggatatgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctcgttaatgatattaggttctattcaaat 5978  T
Q  262 aatctatgccgcttcaacatc 282  Q
    || |||||||| |||||||||    
T  5979 aaactatgccgattcaacatc 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 22833 - 22953
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22833 aaatgggagcatatgggttggttcgaattaatatggaattattttcccactctcattcaatattttgcccctggataatgatattaggttctactcaaat 22932  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||| ||||||||||||    
T  22933 aatctatgtcgcttcaacatc 22953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 24623 - 24503
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||| |||||||||||||    
T  24623 aaatgggagcatatgggttggttcgaattaatatggaattattttcccatggtcattcaatattttgcccctagttaattatattaagttctattcaaat 24524  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| |||||||||    
T  24523 aatctatgccgattcaacatc 24503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 239617 - 239736
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  239617 aaatgggagcatatgggttggttcgaattaatatggaattattttcccccgctcattcaatattttgcccctggttaa-gatattaggttctactcaaat 239715  T
Q  262 aatctatgccgcttcaacatc 282  Q
    |||||||||||||||||||||    
T  239716 aatctatgccgcttcaacatc 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 41139883 - 41139763
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41139883 aaatgggagcatgtgggttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccctgattaatgatattaggttctattcaaat 41139784  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||| ||||||| |||||||||    
T  41139783 aatatatgccgattcaacatc 41139763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 43440308 - 43440428
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  43440308 aaatgggagcatatgggttggttcgaattaatatgaaattattttcccacgcccattcaatattttgcccctagttaatgatattagattctattcaaat 43440407  T
Q  262 aatctatgccgcttcaacatc 282  Q
    ||||||||||| || ||||||    
T  43440408 aatctatgccgatttaacatc 43440428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 38692044 - 38692161
Alignment:
Q  165 tgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataat 264  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38692044 tgggagcatatgggttggttcaaattaatatgaaattattttcccacgcttattcaatattttgcccctggttaatgatattatgttctattcaaataat 38692143  T
Q  265 ctatgccgcttcaacatc 282  Q
    |||||  | |||||||||    
T  38692144 ctatgttgattcaacatc 38692161  T

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Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 162 - 278
Target Start/End: Complemental strand, 13920878 - 13920763
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  13920878 aaatgggaacatatgggttggttcgaattaatatggaattatttttccacgctcattcaatattttgcccctgattaatgatattgagttctattcaaat 13920779  T
Q  262 aatctatgccgcttcaa 278  Q
     |||||||||| |||||    
T  13920778 -atctatgccgattcaa 13920763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 26865359 - 26865399
Alignment:
Q  164 atgggagcatatgggttgattcgaattaatatggaattatt 204  Q
    |||||| ||||||||||| ||||||||||||| ||||||||    
T  26865359 atgggatcatatgggttggttcgaattaatatcgaattatt 26865399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 9554 - 9669
Alignment:
Q  167 ggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatct 266  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||    
T  9554 ggagcatatgtgttggttcgaattaatatggaattattttcccacgctcattcaatattttgcccatgattaatgatattaggttctactcaaataatct 9653  T
Q  267 atgccgcttcaacatc 282  Q
    ||||||||||||||||    
T  9654 atgccgcttcaacatc 9669  T

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Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 17246262 - 17246152
Alignment:
Q  172 atatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaataatctatgcc 271  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17246262 atatgggttggttcgaattaatatggaattatttttccacgttcattcaatattttgcccctggttaatgatattaggttctactcaaataatctatgcc 17246163  T
Q  272 gcttcaacatc 282  Q
    |||||||||||    
T  17246162 gcttcaacatc 17246152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 22972023 - 22971915
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  22972023 aaatgggagcatgtgggttggttcgaattaatatggaattactttcccacactcattgaatatttttcccctgattaatgatattaggttctattcaaat 22971924  T
Q  262 aatctatgc 270  Q
    || ||||||    
T  22971923 aacctatgc 22971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 23816375 - 23816483
Alignment:
Q  162 aaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattaggttctattcaaat 261  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  23816375 aaatgggagcatgtgggttggttcgaattaatatggaattactttcccacactcattgaatatttttcccctgattaatgatattaggttctattcaaat 23816474  T
Q  262 aatctatgc 270  Q
    || ||||||    
T  23816475 aacctatgc 23816483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 50 - 279
Target Start/End: Original strand, 172020 - 172249
Alignment:
Q  50 cttattgcttttgctgtcaaatcgccgattatacccttacatacatggttaccagatacccacggagaggcacattacagcacttgtatgcttttagccg 149  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || || |||||||| || || |||||||||||||| |    
T  172020 cttattgcttatgctgtcaaattgccgattatacccctacatacgtggttaccagatacccatggggaagcacattatagtacatgtatgcttttagcgg 172119  T
Q  150 gaatcttattaaaaatgggagcatatgggttgattcgaattaatatggaattattttcccacgctcattcaatattttgcccctggttaatgatattagg 249  Q
    |||| |||||||| |||||||||||||| |||||||| || || |||||||| ||  | || |||||||   ||||||  ||||||||| | ||| ||||    
T  172120 gaatattattaaagatgggagcatatggattgattcggatcaacatggaattgttacctcatgctcattatctattttcgccctggttagtaataatagg 172219  T
Q  250 ttctattcaaataatctatgccgcttcaac 279  Q
      |||| |||||||||||||| ||||||||    
T  172220 agctatccaaataatctatgcagcttcaac 172249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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