View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12315_low_6 (Length: 361)

Name: NF12315_low_6
Description: NF12315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12315_low_6
NF12315_low_6
[»] chr4 (18 HSPs)
chr4 (78-341)||(1148166-1148426)
chr4 (162-254)||(1171866-1171955)
chr4 (19-68)||(1148064-1148113)
chr4 (194-235)||(1164409-1164450)
chr4 (288-336)||(18513176-18513224)
chr4 (297-341)||(19312411-19312455)
chr4 (287-341)||(3947701-3947755)
chr4 (288-334)||(37203324-37203370)
chr4 (288-341)||(14465006-14465059)
chr4 (288-341)||(22234820-22234873)
chr4 (288-341)||(23292927-23292980)
chr4 (288-341)||(24613631-24613684)
chr4 (212-254)||(1181158-1181200)
chr4 (292-338)||(3712458-3712504)
chr4 (288-342)||(42640588-42640642)
chr4 (289-338)||(22440559-22440608)
chr4 (288-337)||(24343582-24343631)
chr4 (287-336)||(40965341-40965390)
[»] chr5 (3 HSPs)
chr5 (288-341)||(32766873-32766926)
chr5 (288-340)||(42893426-42893478)
chr5 (288-341)||(43564946-43564999)
[»] scaffold0003 (1 HSPs)
scaffold0003 (288-341)||(241670-241723)
[»] chr7 (10 HSPs)
chr7 (288-341)||(598273-598326)
chr7 (288-341)||(1433524-1433577)
chr7 (288-341)||(21880217-21880270)
chr7 (288-341)||(5409772-5409825)
chr7 (288-341)||(29763130-29763183)
chr7 (288-341)||(15680874-15680927)
chr7 (288-341)||(21864873-21864926)
chr7 (288-341)||(43027405-43027458)
chr7 (288-340)||(9778571-9778623)
chr7 (297-337)||(18215147-18215187)
[»] chr1 (11 HSPs)
chr1 (288-341)||(9828120-9828173)
chr1 (288-337)||(2218297-2218346)
chr1 (288-341)||(6427540-6427593)
chr1 (289-336)||(16297223-16297270)
chr1 (287-341)||(40258873-40258927)
chr1 (292-341)||(5898211-5898260)
chr1 (288-341)||(18556386-18556439)
chr1 (288-341)||(40917825-40917878)
chr1 (289-341)||(1486646-1486698)
chr1 (288-336)||(10233326-10233374)
chr1 (289-341)||(17778618-17778670)
[»] chr8 (9 HSPs)
chr8 (288-341)||(22652052-22652105)
chr8 (307-340)||(12570458-12570491)
chr8 (307-340)||(12570684-12570717)
chr8 (288-333)||(15816059-15816104)
chr8 (288-337)||(24413500-24413549)
chr8 (288-341)||(29447520-29447573)
chr8 (288-337)||(36450695-36450744)
chr8 (288-336)||(27213595-27213643)
chr8 (289-337)||(44067596-44067644)
[»] chr6 (8 HSPs)
chr6 (288-333)||(7378052-7378097)
chr6 (290-337)||(9025448-9025495)
chr6 (297-339)||(18803501-18803543)
chr6 (298-336)||(33340895-33340933)
chr6 (304-342)||(34172252-34172290)
chr6 (288-341)||(17435275-17435328)
chr6 (288-341)||(24645546-24645599)
chr6 (288-336)||(7248439-7248487)
[»] chr3 (10 HSPs)
chr3 (288-341)||(41961580-41961633)
chr3 (288-337)||(11610578-11610627)
chr3 (287-332)||(25211604-25211649)
chr3 (288-341)||(27505316-27505369)
chr3 (289-334)||(29508522-29508567)
chr3 (288-341)||(34185053-34185106)
chr3 (288-341)||(55401140-55401193)
chr3 (297-341)||(4987230-4987274)
chr3 (289-337)||(24204983-24205031)
chr3 (289-337)||(25775576-25775624)
[»] chr2 (6 HSPs)
chr2 (288-341)||(21782745-21782798)
chr2 (288-341)||(26769587-26769640)
chr2 (288-337)||(37419823-37419872)
chr2 (283-340)||(42511318-42511375)
chr2 (289-341)||(2438661-2438713)
chr2 (288-340)||(38117100-38117152)
[»] scaffold0053 (1 HSPs)
scaffold0053 (288-341)||(8863-8916)
[»] scaffold0020 (1 HSPs)
scaffold0020 (288-337)||(135264-135313)
[»] scaffold0652 (1 HSPs)
scaffold0652 (285-337)||(400-452)
[»] scaffold0044 (1 HSPs)
scaffold0044 (297-341)||(53256-53300)
[»] scaffold0019 (1 HSPs)
scaffold0019 (288-340)||(71802-71854)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 78 - 341
Target Start/End: Original strand, 1148166 - 1148426
Alignment:
Q  78 aacatgcaaagattcagacatgtatatatattcatactacatttccaaatgatatttatggattgagatttacagaatacagacgacacaaactaatcaa 177  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1148166 aacatgcaaagattcagacatgtatatat--tcatactacatttccaaatgatatttatggat-gagatttacagaatacagacgacacaaactaatcaa 1148262  T
Q  178 caagaaaacatgatactaattgtggccaaaatatatagtatttagtagcaataaagacaaagtgaggattaatgtagaccacggtggaagtgaaacaatg 277  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1148263 caagaaaacatgagactaattgtggccaaaatatatagtatttagtagcaataaagacaaagtgaggattaatgtagaccacagtggaagtgaaacaatg 1148362  T
Q  278 tgtctaaagttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||||| |||||||||| |||||||||| ||||| |||||| ||||||||  |||||||||    
T  1148363 tgtctaaagctatgaagctcagacacttctcggattatacgtgttctggtgtcaaacacgtgtc 1148426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 1171866 - 1171955
Alignment:
Q  162 gacacaaactaatcaacaagaaaacatgatactaattgtggccaaaatatatagtatttagtagcaataaagacaaagtgaggattaatgtag 254  Q
    ||||||||| ||||||||||| ||||||||| |||||| || |||||||||   |||||||||||||||||||| ||| | ||||||||||||    
T  1171866 gacacaaacaaatcaacaagagaacatgatattaattgcggtcaaaatata---tatttagtagcaataaagactaagagtggattaatgtag 1171955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 1148064 - 1148113
Alignment:
Q  19 acaattcactagttcaacatttacatgtttgcatcaagtaagccttagtt 68  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1148064 acaattcactagttcaacatttacatgtttgcatcatgtaagccttagtt 1148113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 1164409 - 1164450
Alignment:
Q  194 taattgtggccaaaatatatagtatttagtagcaataaagac 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1164409 taattgtggccaaaatacatagtatttagtagcaataaagac 1164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 18513176 - 18513224
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  18513176 tatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 19312455 - 19312411
Alignment:
Q  297 cggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  19312455 cggacacttctcagattagacgtgtctcggtgtcggacacgtgtc 19312411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 3947701 - 3947755
Alignment:
Q  287 ttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||||| |||||||| ||| ||||||  ||||||||||||||||||||||||    
T  3947701 ttatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtc 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 37203370 - 37203324
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggac 334  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||    
T  37203370 tatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 14465006 - 14465059
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||||||||||||||||||  |||||| |||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtc 14465059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 22234820 - 22234873
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| || ||||||||| ||||||  ||||||||||||||||||||||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtc 22234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 23292927 - 23292980
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 24613631 - 24613684
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||  ||||||||||||||||||||| ||||||||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtc 24613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 1181158 - 1181200
Alignment:
Q  212 atagtatttagtagcaataaagacaaagtgaggattaatgtag 254  Q
    |||||||||||||||||||||||| ||| | ||||||||||||    
T  1181158 atagtatttagtagcaataaagactaagagtggattaatgtag 1181200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 3712458 - 3712504
Alignment:
Q  292 aagctcggacacttctcagattagacgtgtcctggtgtcggacacgt 338  Q
    |||| |||||||| |||||||||| ||||||| ||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 42640642 - 42640588
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtcc 342  Q
    |||||||| |||| ||| ||| |||||| |||||||||||| |||||||||||||    
T  42640642 tatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtcc 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgt 338  Q
    ||||||| |||||||| ||| |||||| |||||||| |||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 24343631 - 24343582
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||| |||||| ||| ||||||| |||||||||||||    
T  24343631 tatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacg 24343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 40965390 - 40965341
Alignment:
Q  287 ttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    ||||||||| | |||||| |||||||||| |||||| |||||||||||||    
T  40965390 ttatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 32766873 - 32766926
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  32766873 tatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtc 32766926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 42893478 - 42893426
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    ||||||||  ||||||| |||| ||||| ||||||||||||||||||||||||    
T  42893478 tatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgt 42893426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 43564999 - 43564946
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| ||||||| || ||||||||| ||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtc 43564946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 241723 - 241670
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||||||||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtc 241670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 598326 - 598273
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||||||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtc 598273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 1433577 - 1433524
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtc 1433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 21880270 - 21880217
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||| |||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtc 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 5409772 - 5409825
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 29763130 - 29763183
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||||||||||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtc 29763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 15680927 - 15680874
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| |||  ||||||||||||  |||||||||||||||||    
T  15680927 tatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtc 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 21864926 - 21864873
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| | |||||| |||  ||||||||||||| |||||||||||||||||    
T  21864926 tatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtc 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 43027405 - 43027458
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| ||||||||  || |||||| ||||||| |||||||||||||||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtc 43027458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 9778623 - 9778571
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    |||||||| |||||||| ||  |||||| ||||||| ||||||||||||||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgt 9778571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 18215147 - 18215187
Alignment:
Q  297 cggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  18215147 cggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 9828173 - 9828120
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtc 9828120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 2218346 - 2218297
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||| |||||||||| |||||||| ||||||||||||    
T  2218346 tatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 6427593 - 6427540
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| ||||||||  ||||||||| ||||||| |||||||||||||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtc 6427540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 40258873 - 40258927
Alignment:
Q  287 ttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||||  ||||||| ||| |||||| ||||||||||||||||||| |||||    
T  40258873 ttatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtc 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 5898211 - 5898260
Alignment:
Q  292 aagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||| |||||||| ||| |||||||||||||| ||||| |||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtc 5898260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 18556386 - 18556439
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| |||||||  |||||||| |||||||    
T  18556386 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtc 18556439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 40917878 - 40917825
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||| | ||| |||||| ||||||| |||||||||||||||||    
T  40917878 tatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtc 40917825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 1486646 - 1486698
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||| | |||||| ||| |||||| ||||||| |||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    |||||||| |||||||| ||| ||||||  |||||||||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 17778670 - 17778618
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||| || ||||||||| |||||| | ||||| |||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtc 17778618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 22652105 - 22652052
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||||||||||| |||||||||||| ||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtc 22652052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 12570458 - 12570491
Alignment:
Q  307 tcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    ||||||||| ||||||||||||||||||||||||    
T  12570458 tcagattaggcgtgtcctggtgtcggacacgtgt 12570491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 12570684 - 12570717
Alignment:
Q  307 tcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    ||||||||| ||||||||||||||||||||||||    
T  12570684 tcagattaggcgtgtcctggtgtcggacacgtgt 12570717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 15816059 - 15816104
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcgga 333  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 24413500 - 24413549
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||||||| |||||||||||||| | ||| |||||||    
T  24413500 tatgaagcacggacacttctcggattagacgtgtcccgctgttggacacg 24413549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 29447573 - 29447520
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||||| ||||| |||||||||||| ||||    
T  29447573 tatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtc 29447520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 36450695 - 36450744
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| | |||||| ||| |||||| |||||||||||||||||||||    
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacg 36450744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 27213643 - 27213595
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    |||||||| |||||||||||| |||||| ||||||| |||||| |||||    
T  27213643 tatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 44067644 - 44067596
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    ||||||| |||||||| |||  ||||| |||||||||||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 44067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 7378097 - 7378052
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcgga 333  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||    
T  7378097 tatgaagcacggacacttctcagattagccgtgtcccggtgtcgga 7378052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  290 tgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 18803501 - 18803543
Alignment:
Q  297 cggacacttctcagattagacgtgtcctggtgtcggacacgtg 339  Q
    |||||||||||| |||||||||||||||| ||||||| |||||    
T  18803501 cggacacttctcggattagacgtgtcctgatgtcggatacgtg 18803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 33340895 - 33340933
Alignment:
Q  298 ggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  33340895 ggacacttctcagattagacgtgtcccagtgtcggacac 33340933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 34172290 - 34172252
Alignment:
Q  304 ttctcagattagacgtgtcctggtgtcggacacgtgtcc 342  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  34172290 ttctcggattaggcgtgtcctggtgtcggacacgtgtcc 34172252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 17435328 - 17435275
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||  ||||||||| |||||||||||||||||  |||||| |||||||||    
T  17435328 tatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtc 17435275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 24645599 - 24645546
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| | ||||||  || ||||||||||||| ||||||||||||||||||    
T  24645599 tatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtc 24645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 7248487 - 7248439
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacac 336  Q
    |||||||| |||||||| ||| |||| ||||||||| ||||||||||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 41961580 - 41961633
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||||||| |||||| |||||||  ||||||||||||||||    
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtc 41961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 11610627 - 11610578
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||||||    
T  11610627 tatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 25211649 - 25211604
Alignment:
Q  287 ttatgaagctcggacacttctcagattagacgtgtcctggtgtcgg 332  Q
    ||||||||| |  |||||||||||||||| ||||||||||||||||    
T  25211649 ttatgaagcacaaacacttctcagattaggcgtgtcctggtgtcgg 25211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 27505369 - 27505316
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| | ||||| |||||||||||||||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtc 27505316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 29508567 - 29508522
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggac 334  Q
    ||||||| |||||||||||  |||||||||||||| ||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggac 29508522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 34185053 - 34185106
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| ||||||| |||||||||||| ||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtc 34185106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 55401193 - 55401140
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| ||||||  |||||||||||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtc 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 4987230 - 4987274
Alignment:
Q  297 cggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  4987230 cggacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 4987274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 24204983 - 24205031
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    ||||||| |||||||| |||  ||||| |||||||||||||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 24205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 25775624 - 25775576
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    ||||||| || ||||| ||| |||||| |||||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacg 25775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 21782745 - 21782798
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| | |||||||||||||||| ||||| |||||||||||    
T  21782745 tatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtc 21782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 26769640 - 26769587
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||||||| ||| |||||| |||||||  ||||||||||||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 26769587  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 37419872 - 37419823
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| |||||||| ||| |||||| ||||||| |||||||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 37419823  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 42511318 - 42511375
Alignment:
Q  283 aaagttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    |||| |||||||| |||||||| ||| |||||| |||||||  |||||||||||||||    
T  42511318 aaagctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgt 42511375  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 2438661 - 2438713
Alignment:
Q  289 atgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    ||||||| |||||||| ||| |||||| ||||||| ||||||||||| |||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtc 2438713  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 38117100 - 38117152
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    |||||||| |||||||  ||| |||||| ||||||| ||||||||||||||||    
T  38117100 tatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgt 38117152  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 8916 - 8863
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||| |||| ||| |||||||||| ||||||  |||||||||||||||||    
T  8916 tatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtc 8863  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 135264 - 135313
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    |||||||| || ||||  |||||||||| |||||||||||||||||||||    
T  135264 tatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 400 - 452
Alignment:
Q  285 agttatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacg 337  Q
    ||||||||||| |||||||| ||| ||||||  |||||| |||||||||||||    
T  400 agttatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacg 452  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 53300 - 53256
Alignment:
Q  297 cggacacttctcagattagacgtgtcctggtgtcggacacgtgtc 341  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||    
T  53300 cggacacttcttggattaaacgtgtcccggtgtcggacacgtgtc 53256  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 71854 - 71802
Alignment:
Q  288 tatgaagctcggacacttctcagattagacgtgtcctggtgtcggacacgtgt 340  Q
    |||||||| | |||||| ||| |||||| ||||||| ||||||||||||||||    
T  71854 tatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgt 71802  T

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