View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12320_high_1 (Length: 508)
Name: NF12320_high_1
Description: NF12320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12320_high_1 |
 | |
|
| [»] scaffold0002 (5 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 409; Significance: 0; HSPs: 53)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 17 - 489
Target Start/End: Complemental strand, 10517899 - 10517427
Alignment:
| Q |
17 |
ccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaac |
116 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
10517899 |
ccttactaccaaatgcatgttttgagagtaaagaccaacaatcttcatgagatagaggttctaattcctgaataggaaatgtgtgtgccacctctgcaac |
10517800 |
T |
|
| Q |
117 |
tttttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaa |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
10517799 |
tttttgttggcgcgttgttataatcaccgaactcccgggttttccatcattgagtggacttactagttcaagccaatcattgtaatcatcattccacaaa |
10517700 |
T |
|
| Q |
217 |
tcatctaacacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctg |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517699 |
tcatctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctg |
10517600 |
T |
|
| Q |
317 |
atgttgtatttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttg |
416 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517599 |
atgttgtatttctaacaatagattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttg |
10517500 |
T |
|
| Q |
417 |
ttcaacttttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgca |
489 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517499 |
ttcaacttttgcatcattgtaaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgca |
10517427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 11 - 488
Target Start/End: Original strand, 11781631 - 11782108
Alignment:
| Q |
11 |
cacagaccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctc |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
11781631 |
cacagtccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaatgcatgaataggaaatgtgtgtgccacctc |
11781730 |
T |
|
| Q |
111 |
tgcaactttttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattc |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11781731 |
tgcaactttttgttggcgagttgttataatcaccgaacttccaggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattc |
11781830 |
T |
|
| Q |
211 |
cacaaatcatctaacacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781831 |
cacaaatcatctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgaag |
11781930 |
T |
|
| Q |
311 |
cagctgatgttgtatttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaa |
410 |
Q |
| |
|
||| |||||||||| || |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
11781931 |
cagatgatgttgtacttttaacaacagattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaa |
11782030 |
T |
|
| Q |
411 |
atgttgttcaacttttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgc |
488 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11782031 |
atgttgttcaactttcacatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgc |
11782108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 28 - 491
Target Start/End: Complemental strand, 10527761 - 10527298
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| |||| | ||| || || ||| |||||||||||| |||| ||||| ||||||||| ||||| |
|
|
| T |
10527761 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgataaaagttttagtttatgtataggaaatgtgcgtgccacctcagcaacttttcgttggt |
10527662 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| | |||||| ||||| |
|
|
| T |
10527661 |
gggttgttataatcaccatacttccaggttttccatcaatgagtggacttactagctcatcccaatcattgtaattgtcattccatagatcatccaacac |
10527562 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtattt |
327 |
Q |
| |
|
|||||||||||| |||||||| || | | || || | ||||||||||||||||||||||| ||||||||| |||||||| ||| |||| ||||||| |
|
|
| T |
10527561 |
aaacaaaaatctcttctcccttgagattttctttaactgaactcgaaggatatcaagattattgctttcccagacctttgaagcagaagatgatgtattt |
10527462 |
T |
|
| Q |
328 |
ctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttg |
427 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| | |||||| |||||||| |||||| |||||||||| |||| ||||||||| |||||||| ||| |
|
|
| T |
10527461 |
ctaacaacagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaacctttt |
10527362 |
T |
|
| Q |
428 |
catgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||| |||||||||||| |||||| |||| ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
10527361 |
catcattgtaaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaac |
10527298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 28 - 300
Target Start/End: Original strand, 10433710 - 10433982
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
10433710 |
aatgcatgcttcgagagtaaagaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttggc |
10433809 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
10433810 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10433909 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||||||| |||| | || || ||||| ||||||| ||||||||||| ||| |||||| |
|
|
| T |
10433910 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacacgaaggacatcaagattattgctatcccaa |
10433982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 11769637 - 11769365
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
11769637 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttaattcatgtataggaaatgtgtgtgccacctcagcaacttttcgttggc |
11769538 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||| | ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
11769537 |
gtgttgttataatcaccatgcttccaggttttccattactgaagggacttactagttcaccccaatcattataattgtcattccacatatcatctaacac |
11769438 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||| | || || ||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
11769437 |
aaacaaaaatcttttctccctcaagtttttctttaactcaactcgaaggatatcaagattattgctatcccaa |
11769365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 28 - 299
Target Start/End: Complemental strand, 9839264 - 9838993
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| |||||| | ||||||| ||| || |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
9839264 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9839165 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9839164 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9839065 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
||||||||||||||||||||| |||| | || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
9839064 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9838993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 28 - 299
Target Start/End: Complemental strand, 9850142 - 9849871
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| |||||| | ||||||| ||| || |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
9850142 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9850043 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9850042 |
gtgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9849943 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
||||||||||||||||||||| |||| | || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
9849942 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9849871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 21 - 299
Target Start/End: Original strand, 10375504 - 10375782
Alignment:
| Q |
21 |
actaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttt |
120 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
10375504 |
actacccaatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgctaccttagcaactttt |
10375603 |
T |
|
| Q |
121 |
tgttggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcat |
220 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| |||||||| |||| |||||||||||||||| |
|
|
| T |
10375604 |
cgttggcgcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcataataattgtcattccacaaatcat |
10375703 |
T |
|
| Q |
221 |
ctaacacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
| |||||||||||||||||||||||||| | || | || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
10375704 |
ccaacacaaacaaaaatcttttctcccttgattttttctttaacgcaactcgaaggacatcaagattattgctatccca |
10375782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10663929 - 10663671
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||||||||||| |||||| ||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
10663929 |
aatgcatgctttgaaagtaaggaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttcgc |
10663830 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| |||||| |||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10663829 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttgctagttcactccaatcattataattgtcattccacagatcatcgaacac |
10663730 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | | || || ||||||||||||| |||||||| |
|
|
| T |
10663729 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10663671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 10089193 - 10088967
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||| || ||| ||||||||| ||| ||||||||||||||||| ||||| || ||||||| ||||| |
|
|
| T |
10089193 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10089094 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10089093 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10088994 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagtt |
254 |
Q |
| |
|
|||||||||||||||||||||| |||| |
|
|
| T |
10088993 |
aaacaaaaatcttttctccctcgagtt |
10088967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 10196076 - 10195850
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||| || ||| ||||||||| ||| ||||||||||||||||| ||||| || ||||||| ||||| |
|
|
| T |
10196076 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10195977 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10195976 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10195877 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagtt |
254 |
Q |
| |
|
|||||||||||||||||||||| |||| |
|
|
| T |
10195876 |
aaacaaaaatcttttctccctcgagtt |
10195850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 10363466 - 10363733
Alignment:
| Q |
30 |
tgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggcgc |
129 |
Q |
| |
|
|||||| || |||||||||| |||||||||||||| |||||| | ||||||| ||| ||||||||||||||||| ||||| || ||||||| ||||||| |
|
|
| T |
10363466 |
tgcatgctttgagagtaaagtccaacaatcttcatttgatagaagatctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgc |
10363565 |
T |
|
| Q |
130 |
gttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacacaa |
229 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| ||| || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||||| |
|
|
| T |
10363566 |
gttgttataatcaccatgcttccaggttttccatcaatgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaa |
10363665 |
T |
|
| Q |
230 |
acaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
||||| |||||||||||||| || | | || || ||||||||||||| ||||||||||| ||||||| |
|
|
| T |
10363666 |
acaaatatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctttcc |
10363733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10032406 - 10032148
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||| |||||| ||| || |||||| |||||||||||| ||| ||||| ||||||||| |||||| |
|
|
| T |
10032406 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaacttttcgttggc |
10032307 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| || || |
|
|
| T |
10032306 |
gtgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcatccaaaac |
10032207 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | | || || ||||||||||||| |||||||| |
|
|
| T |
10032206 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10032148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10077672 - 10077414
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||| ||||||||||||||| |||| |||||||||| ||| |||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
10077672 |
aatgcatgctttgaaagtaaataccaacaatcttcatttgataaaggttctaatatatgtataggaaatgtgcgtgccacctctgcaactttttgttggc |
10077573 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| | ||||||||| ||| |||||||| || ||| ||||||| | |||| |||||||||| |||||||||||| |
|
|
| T |
10077572 |
gtgttgttataatcaccatgcttccatgctttccatcaatgaagggacttacaagttcatcccaatcactataattgtcattccacatatcatctaacac |
10077473 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
||||||||||||||| |||||| |||| |||| || ||||||||||||| |||||||| |
|
|
| T |
10077472 |
aaacaaaaatcttttatccctcgagtttttttttaactcaactcgaaggacatcaagat |
10077414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 10184645 - 10184373
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||| |||||||||||||||| |||||| ||| || |||||| ||||||||||||||||| ||||| || ||||||| ||||| |
|
|
| T |
10184645 |
aatgcatgctttgagagtaacgaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10184546 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||| |||||| || || |
|
|
| T |
10184545 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagctcatcccaatcatcataactgtcattccacagatcatccaatac |
10184446 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||||||||| | | | || || ||||||||||||| ||||||||||| ||| |||||| |
|
|
| T |
10184445 |
aaacaaaaatcttttctcccttgaatgtttctttaactcaactcgaaggacatcaagattattgctatcccaa |
10184373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 10261101 - 10260840
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| ||| ||||| |||||||||||||| | |
|
|
| T |
10261101 |
aatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaactttttgttgcc |
10261002 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| || || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
10261001 |
gcgttgttataatcaccatgcttccaggttttccatcaacgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10260902 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||||||||||| || | | || || |||||||||||||| |||||||||| |
|
|
| T |
10260901 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggatgtcaagattat |
10260840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 491
Target Start/End: Complemental strand, 10500981 - 10500517
Alignment:
| Q |
24 |
accaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgt |
123 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
10500981 |
accaaatgcatgcttcgagagtaaagtccaacaatcatcatcagatagaggttctaatttatgaataggaaatgtgcatgcgacctctgcaactttttgt |
10500882 |
T |
|
| Q |
124 |
tggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatcta |
223 |
Q |
| |
|
| ||| |||||||| ||||| | ||| | || || | | | | ||| ||| || |||| ||| ||| ||| |||||||||| || || | |
|
|
| T |
10500881 |
tcgcgtgttgttattatcactttgcctcctgtttctctgttagtcaagggagttattaactcatcccagtcaacataactgtcattccacatgtcgtcca |
10500782 |
T |
|
| Q |
224 |
acacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgt |
323 |
Q |
| |
|
||||||||||||||||| | ||| |||| | | | || |||||| |||||||||||||||||| |||||| ||| |||| | |||||||| |
|
|
| T |
10500781 |
acacaaacaaaaatcttctatccatcaaatgtttcattaactcaacttgaaggatatcaagattattgctttcg---accattgaattgacagatgttgt |
10500685 |
T |
|
| Q |
324 |
atttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaact |
423 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||| | |||||| |||||||| | |||||||| ||| || || | ||||||||||| ||||| | |
|
|
| T |
10500684 |
atttctaacaacagattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaatt |
10500585 |
T |
|
| Q |
424 |
tttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|| | | ||||||||||| || ||| | || ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10500584 |
ttatcgtcgttgtaaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaac |
10500517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 40 - 297
Target Start/End: Complemental strand, 10580992 - 10580735
Alignment:
| Q |
40 |
gagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggcgcgttgttataa |
139 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| | ||| | || ||| ||||||| | || || |||||||||||||||||||||||||| |
|
|
| T |
10580992 |
gagagtaaagaccaacaatcttcatttgatagaggttctaaattatgtacagcaaacatgtgtgccatctttgtaactttttgttggcgcgttgttataa |
10580893 |
T |
|
| Q |
140 |
tcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatct |
239 |
Q |
| |
|
||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
10580892 |
tcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccacagatcatccaacacaaacaaaaatct |
10580793 |
T |
|
| Q |
240 |
tttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
||||||||| || | | || || ||||| ||||||| ||||||||||| ||||||| |
|
|
| T |
10580792 |
tttctcccttgagattttctttaactcaacacgaaggacatcaagattattgctttcc |
10580735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 10127331 - 10127059
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||||||||||||||||||| ||||| || || |||||| |||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
10127331 |
aatgcatgctttgatagtaaagaccaacaatcttcatctgatagtacttttagttcatgtataggaaatgtgcgtgccacctcagcaactttttgttggc |
10127232 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||| | ||| || ||||| |
|
|
| T |
10127231 |
gcgttgttataatcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccatagatcgtccaacac |
10127132 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||| |||||| || | | || || |||||||||||| ||||||||||| ||| |||||| |
|
|
| T |
10127131 |
aaacaaaaatcttttttccctcgagattttctttaacgcaactcgaaggacatcaagattattgctatcccaa |
10127059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 337 - 491
Target Start/End: Original strand, 10375799 - 10375953
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || || |||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
10375799 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
10375898 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| |||||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10375899 |
aaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10375953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13333307 - 13333046
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
13333307 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13333208 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| ||| || | | | | |||| |||||| |||| ||||||||| |||| |||||||||| ||||| ||||| |
|
|
| T |
13333207 |
gtgttgtgatgatcaccctacttccttttttgccgttaatcagtggagttactaactcatcccaatcattataattgtcattccacaggtcatccaacac |
13333108 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
13333107 |
taacaaaaatcttttatccctcaagtttttattcaattcaactcgaagaaaatcaagattat |
13333046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 13161386 - 13161115
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
13161386 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13161287 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13161286 |
ggcgtgttgtgatgatcaccctacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13161187 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttc |
296 |
Q |
| |
|
||| |||||||||||||| ||||||||||| | ||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
13161186 |
cactaacaaaaatcttttatccctcaagtttttattcaactcaactcgaagagaatcaagattattgctttc |
13161115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13171434 - 13171173
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
13171434 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13171335 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13171334 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13171235 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
13171234 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
13171173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13344492 - 13344231
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
13344492 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13344393 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13344392 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13344293 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
13344292 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
13344231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 364 - 491
Target Start/End: Original strand, 11159998 - 11160125
Alignment:
| Q |
364 |
aaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcaggggtcgttttac |
463 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| ||||||||||||||||| | || ||||||| ||| |||||||||||| |||||| | |||||||||| |
|
|
| T |
11159998 |
aaaatatcaaaatcctcagatacacaagcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttac |
11160097 |
T |
|
| Q |
464 |
cgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||| ||||||||||| | ||||||||| |
|
|
| T |
11160098 |
cgacacctcccatacctaaaattgcaac |
11160125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 13290071 - 13289800
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
13290071 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13289972 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13289971 |
ggcgtgttgtgatgatcaccctacttcctgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13289872 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttc |
296 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||| |
|
|
| T |
13289871 |
caccaacaaaaatcttttatccctcaagttttgattcagttcaactcgaagagaatcaagattattgctttc |
13289800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10032121 - 10031964
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| |||||| ||||||| || |||||||||||||||| ||||| | || || |
|
|
| T |
10032121 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaaaatgttgttgaacttctttatcat |
10032022 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10032021 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10031964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10127046 - 10126889
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | || || |
|
|
| T |
10127046 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcat |
10126947 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10126946 |
tgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaac |
10126889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10663644 - 10663487
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | || || |
|
|
| T |
10663644 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcat |
10663545 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10663544 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10663487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10889424 - 10889267
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
||||||||||| |||| || ||||| | |||| |||||||||||||||||||||| |||| ||||||| |||||| || | || ||||||| ||| || |
|
|
| T |
10889424 |
acagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcat |
10889325 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| |||||| | |||||||||||||| ||||||||||| | ||||||||| |
|
|
| T |
10889324 |
tgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaac |
10889267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Original strand, 11130977 - 11131134
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||| || |||||||| |||| |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| ||| || |
|
|
| T |
11130977 |
acagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcat |
11131076 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||| ||| |||||| |||| ||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
11131077 |
tgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaac |
11131134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 334 - 491
Target Start/End: Original strand, 11148805 - 11148962
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||| || |||||||| |||| |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| ||| || |
|
|
| T |
11148805 |
acagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcat |
11148904 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||| ||| |||||| |||| ||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
11148905 |
tgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaac |
11148962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11130689 - 11130964
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
11130689 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11130788 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11130789 |
ggcgtgttgtgacgatgaccctgcttccattgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaa |
11130888 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | | |||| |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11130889 |
cacaaacaaaaatcttttgtctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaa |
11130964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 9838976 - 9838822
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || | | |||||||||||||| ||||| | ||| ||||| |
|
|
| T |
9838976 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt |
9838877 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
9838876 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
9838822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 9849854 - 9849700
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || | | |||||||||||||| ||||| | ||| ||||| |
|
|
| T |
9849854 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt |
9849755 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
9849754 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
9849700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 491
Target Start/End: Original strand, 10363750 - 10363906
Alignment:
| Q |
335 |
cagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgatt |
434 |
Q |
| |
|
||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | || ||| |
|
|
| T |
10363750 |
cagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcatt |
10363849 |
T |
|
| Q |
435 |
gtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||||| || ||| |||| ||||| || | |||||||| || | ||||||||| |
|
|
| T |
10363850 |
gtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaac |
10363906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11148517 - 11148792
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
11148517 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11148616 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | || |||| || ||| ||||||||| |||| |||||||| || ||||| || |
|
|
| T |
11148617 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggtgttacaagttcatcccaatcattataattgtcattccataagtcatccaa |
11148716 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| | ||||| | | |||| |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11148717 |
cacaaacaaaaatcttttggctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaa |
11148792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11159680 - 11159955
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
11159680 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11159779 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11159780 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccaaaggtcatccaa |
11159879 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | | || | |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11159880 |
cacaaacaaaaatcttttgtcgctcaaagttttctttagttcaactcgaagaaaatcaagattattggtttcccaa |
11159955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 369 - 491
Target Start/End: Complemental strand, 8861369 - 8861247
Alignment:
| Q |
369 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacg |
468 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||| |||||| || | || ||||||| ||| |||||||||||| |||||| | |||||||||||||| |
|
|
| T |
8861369 |
atcaaaatcctctgatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgaca |
8861270 |
T |
|
| Q |
469 |
cctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||||||| | ||||||||| |
|
|
| T |
8861269 |
cctcccatacctaaaattgcaac |
8861247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 8861692 - 8861583
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
8861692 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
8861593 |
T |
|
| Q |
125 |
ggcgcgttgt |
134 |
Q |
| |
|
|||| ||||| |
|
|
| T |
8861592 |
ggcgtgttgt |
8861583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10088908 - 10088751
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| | || || |
|
|
| T |
10088908 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcat |
10088809 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| || | ||||||||| |
|
|
| T |
10088808 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaac |
10088751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10195791 - 10195634
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| | || || |
|
|
| T |
10195791 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcat |
10195692 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| || | ||||||||| |
|
|
| T |
10195691 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaac |
10195634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10580719 - 10580562
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
|||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||| || || | ||||||||||||| ||||| | || || |
|
|
| T |
10580719 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgccttcatgtcaaaatgttgttgaacttctttatcat |
10580620 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10580619 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10580562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 10260813 - 10260659
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || || | ||||||||||||| ||||| | || ||||| |
|
|
| T |
10260813 |
gattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgccttcatgtcaaaatgttgttgaacttctttatcattgt |
10260714 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10260713 |
aaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10260659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 491
Target Start/End: Original strand, 10433998 - 10434152
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||| | |||| ||||||||||| ||| |||||| ||||||| || ||||||||||| |||| ||||| | || ||||| |
|
|
| T |
10433998 |
gattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
10434097 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| || ||| |||| ||||| || | |||||||| || | ||||||||| |
|
|
| T |
10434098 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaac |
10434152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 10184360 - 10184203
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
||||||||||||||||||||||||||||| | || |||||||||||| || |||||| |||| || | | |||||||||||||| ||||| | || || |
|
|
| T |
10184360 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccctcatatcaaaatgttgttgaacttctttatcat |
10184261 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|||||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10184260 |
tgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10184203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 10077384 - 10077230
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || | ||||||||||| | | |||||| || ||||| |
|
|
| T |
10077384 |
gattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatcaaaatggtatcgaactttataatcattgt |
10077285 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
10077284 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
10077230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 11769349 - 11769195
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
||||||||||||||| |||||||||| | || ||||||||||||||| || ||| |||| || || |||||||||| ||||| ||||| | || ||||| |
|
|
| T |
11769349 |
gattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgccttcaaatcaaaatattgttgaacttctttatcattgt |
11769250 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
11769249 |
agacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
11769195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 10889712 - 10889603
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| ||||||||| | |||||||| ||||||||||||||||| | |
|
|
| T |
10889712 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttgtgaataggatacgtgtgtgcaacctctgcaactttttgct |
10889613 |
T |
|
| Q |
125 |
ggcgcgttgt |
134 |
Q |
| |
|
|||| ||||| |
|
|
| T |
10889612 |
ggcgtgttgt |
10889603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 13289762 - 13289704
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatg |
413 |
Q |
| |
|
|||||||| |||| ||| |||||||| ||||||||||||||| |||| | ||||||||| |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatg |
13289704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 491
Target Start/End: Complemental strand, 13161077 - 13160941
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcagggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | || ||| |||| ||| || ||| | | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaac |
13160941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 491
Target Start/End: Complemental strand, 13171128 - 13170992
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcagggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | || ||| |||| ||| || ||| | | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaac |
13170992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 491
Target Start/End: Complemental strand, 13333001 - 13332865
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcagggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | || ||| |||| ||| || ||| | | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaac |
13332865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 25 - 491
Target Start/End: Original strand, 17852586 - 17853052
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||| |||| ||||||||||| |||||| ||||||||| |||| ||||| |||||||||| | |
|
|
| T |
17852586 |
ccaaatgcatgctttgagagcaaagaccaacaatcttcatcggatataggttctaatttatgaattggaaatgtgcgtgcaacctccgcaacttttttta |
17852685 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| |||||||| || ||| ||||| | |||||| | | | ||| ||||||||||| ||||||| ||||| |||||||| || || || || |
|
|
| T |
17852686 |
ggcgtgttgttatgatgaccttgcttccagcttttcccttaaacaagggagttactagctcactccaatcaacgtaattgtcattccataagtcgtccaa |
17852785 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgta |
324 |
Q |
| |
|
|||||||||||||||| | ||| |||| | | | ||||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
17852786 |
cacaaacaaaaatcttctatccatcaattgtttcattaattcaactcggaggatatcaagattatcgctttcccagacctttgaagcagcaaatgttgta |
17852885 |
T |
|
| Q |
325 |
tttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaactt |
424 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| ||||||||| |||||||| | |
|
|
| T |
17852886 |
tttctaacaacagattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaacct |
17852985 |
T |
|
| Q |
425 |
ttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|| ||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
17852986 |
tttcatcattgtaaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaac |
17853052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 25 - 491
Target Start/End: Complemental strand, 11485444 - 11484978
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||||||||||| | || |
|
|
| T |
11485444 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcgacctctgcaactttctctt |
11485345 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
||| |||||||| |||||| ||| | | || ||||| | | | ||| ||| || | | ||||||| |||| || ||||| | || || || |
|
|
| T |
11485344 |
cgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaa |
11485245 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgta |
324 |
Q |
| |
|
||||||||||| |||| | ||| |||| | | | | ||||||||| |||||||||||||||||| ||||||||| || ||||| | || ||||| |
|
|
| T |
11485244 |
cacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcccagacttttgaattgacagacgttgtg |
11485145 |
T |
|
| Q |
325 |
tttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaactt |
424 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
11485144 |
tttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactt |
11485045 |
T |
|
| Q |
425 |
ttgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
|| ||| ||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
11485044 |
tttcatcgttgtaaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaac |
11484978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 26 - 479
Target Start/End: Original strand, 44957352 - 44957805
Alignment:
| Q |
26 |
caaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttg |
125 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
44957352 |
caaatgcatgctttgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaatcggaaatgtgtgtgcaacctctgcaacgttttgttc |
44957451 |
T |
|
| Q |
126 |
gcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaac |
225 |
Q |
| |
|
|| |||||||| || ||| ||| | | | || | | | || ||| || |||| ||||||| | |||| |||||||| | || || ||| |
|
|
| T |
44957452 |
acgtgttgttatgatgaccttgctttcagttcctcggttggtcaagggtgttattaactcagaccaatcgatataattgtcattccatatgtcgtccaac |
44957551 |
T |
|
| Q |
226 |
acaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtat |
325 |
Q |
| |
|
||||||||||||||| | ||| |||| | | | ||||||||| |||||||||||||||||||||||||||| || ||||| | | ||||||| | |
|
|
| T |
44957552 |
acaaacaaaaatcttctatccatcaaatgtttcattaattcaacttgaaggatatcaagattatcgctttcccacacatttgaatcgacatatgttgttt |
44957651 |
T |
|
| Q |
326 |
ttctaacaacagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttt |
425 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||| ||||| ||||| |||||||| |||||||| | ||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
44957652 |
ttctaacaacacattcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttt |
44957751 |
T |
|
| Q |
426 |
tgcatgattgtaaacaagctgtgcaggggtcgttttaccgacgcctcccatacc |
479 |
Q |
| |
|
| || |||||||||||| ||||| | |||||||||||||| ||||||||||| |
|
|
| T |
44957752 |
tatatcattgtaaacaagttgtgcgagagtcgttttaccgacacctcccatacc |
44957805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 289
Target Start/End: Complemental strand, 26907309 - 26907039
Alignment:
| Q |
19 |
ttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactt |
118 |
Q |
| |
|
||||| || |||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
26907309 |
ttacttcccaatgcatgctttgagagtaaagaccaacaatcttcagttgatagaggttctaatttatgtataggaaatgtatgtgccacctctgcaactt |
26907210 |
T |
|
| Q |
119 |
tttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatc |
218 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||| | ||| |||||||| || || ||||||| | |||| || ||||||| || |
|
|
| T |
26907209 |
tttgttggcgcgttgttataatcaccatgcttccaggttttccatgaatgaagggacttacaagttcttcccaatcactataattgtcgttccacaggtc |
26907110 |
T |
|
| Q |
219 |
atctaacacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||| | | || ||||||||||||| ||||||||||| |
|
|
| T |
26907109 |
atccaacacaaacaaaaatcttttctcccttgagtttttccttaactcaactcgaaggacatcaagattat |
26907039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 491
Target Start/End: Complemental strand, 26907012 - 26906858
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgt |
436 |
Q |
| |
|
|||||||||||||| ||||||||||| | || ||||||||||||||| ||||||||||| || || ||||||||||| ||| ||||| | || ||||| |
|
|
| T |
26907012 |
gattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgccgttgaacttctttatcattgt |
26906913 |
T |
|
| Q |
437 |
aaacaagctgtgcaggggtcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
||| ||| || ||| |||| ||||| || | |||||||| |||| ||||||||| |
|
|
| T |
26906912 |
aaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaac |
26906858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 74; Significance: 1e-33; HSPs: 5)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 135554 - 135815
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
135554 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
135653 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
135654 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
135753 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
135754 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
135815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 145605 - 145866
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
145605 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
145704 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
145705 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
145804 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
145805 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
145866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 153910 - 154026
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
153910 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
154009 |
T |
|
| Q |
128 |
gcgttgttataatcacc |
144 |
Q |
| |
|
| ||||| || |||||| |
|
|
| T |
154010 |
gtgttgtgatgatcacc |
154026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 491
Target Start/End: Original strand, 135860 - 135996
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcagggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | || ||| |||| ||| || ||| | | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaac |
135996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 491
Target Start/End: Original strand, 145911 - 146047
Alignment:
| Q |
355 |
gttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgattgtaaacaagctgtgcagggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | || ||| |||| ||| || ||| | | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaac |
491 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaac |
146047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 297
Target Start/End: Original strand, 31679396 - 31679668
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||| |||| |||||||||||||||| || |||||||| || || | | ||| |||||||||| || |
|
|
| T |
31679396 |
ccaaatgcatgctttgagagtaaagaccagcaatcatcatctgatagaggttctaatttatagataggaaaggtatgggtgaactcggcaactttttatt |
31679495 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgattggacttactagctcaaaccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
| || ||||| ||||||||| |||||| | || ||||||| ||| ||| | ||||| | | ||||||||| || ||||||||||| ||||| || |
|
|
| T |
31679496 |
gacgtgttgtgataatcaccctacttccagattctccatcaatgaagggagtgactagatgatgccaatcattatagctatcattccacatgtcatccaa |
31679595 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttccttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
|||||||||||||||||| || ||||||| || |||| |||||||| | |||||||||||| |||||| |
|
|
| T |
31679596 |
cacaaacaaaaatctttttcccttcaagttttgctttaatttgactcgaagaaaatcaagattatcactttcc |
31679668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 826317 - 826225
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgtgctacctctgcaact |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| ||| | ||||||||||| |||| |||||||||| | || ||||| |||||||||||| |
|
|
| T |
826317 |
ccaaatgcatacttggagagtaaagaccaacaatgttcgtccgatagaggttccaatttatgaataggatacgtatgtgcaacctctgcaact |
826225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 443
Target Start/End: Complemental strand, 826026 - 825917
Alignment:
| Q |
334 |
acagattcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatgat |
433 |
Q |
| |
|
||||||||||| |||| || || | |||| ||| |||||||||||| | |||||||||||| |||| ||||||||||| | |||||||| || || |
|
|
| T |
826026 |
acagattcaagtagagcttttgtgattctagaaatatcaaaatcctcggtgacacaaacccagactttcaaatcaaaatgctcatcaactttcttatcat |
825927 |
T |
|
| Q |
434 |
tgtaaacaag |
443 |
Q |
| |
|
|||||||||| |
|
|
| T |
825926 |
tgtaaacaag |
825917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 413
Target Start/End: Complemental strand, 29836756 - 29836682
Alignment:
| Q |
339 |
ttcaaggagagacttggttactctaaaaacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatg |
413 |
Q |
| |
|
|||||||||||| ||||||||||| || | ||||||||| ||||| |||||||||||| ||| | ||||||||| |
|
|
| T |
29836756 |
ttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatg |
29836682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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