View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12325_high_3 (Length: 344)

Name: NF12325_high_3
Description: NF12325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12325_high_3
NF12325_high_3
[»] chr7 (8 HSPs)
chr7 (19-323)||(21601260-21601569)
chr7 (48-186)||(12421454-12421592)
chr7 (18-176)||(21604944-21605109)
chr7 (48-187)||(21594265-21594404)
chr7 (48-185)||(21587234-21587371)
chr7 (65-121)||(21581833-21581889)
chr7 (72-180)||(24203830-24203938)
chr7 (71-202)||(21611173-21611303)
[»] chr3 (14 HSPs)
chr3 (23-200)||(19603664-19603843)
chr3 (48-215)||(19617195-19617365)
chr3 (18-200)||(19549184-19549369)
chr3 (27-200)||(19653548-19653723)
chr3 (63-184)||(19609571-19609691)
chr3 (63-182)||(19626093-19626212)
chr3 (48-182)||(19646593-19646727)
chr3 (18-200)||(19581345-19581530)
chr3 (18-200)||(19563430-19563619)
chr3 (18-187)||(19557193-19557367)
chr3 (18-200)||(19539015-19539204)
chr3 (48-151)||(19612236-19612339)
chr3 (48-200)||(19593490-19593642)
chr3 (18-91)||(18479251-18479327)
[»] chr6 (1 HSPs)
chr6 (18-200)||(18025128-18025313)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 21601569 - 21601260
Alignment:
Q  19 aataaaacttaaggttcaaagttcagatgcttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgcca 118  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21601569 aatagaacttaaggttcaaagttcagatgcttacccgaagccagaaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgcca 21601470  T
Q  119 tttcttgtgaagattgtatcttagagctctattatcttttgtttttgca--atatgcatagcaaacttcaaattccattatatatagtaatcatgatata 216  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21601469 tttcttgtgaagattgtatcttaaagctctattatcttttgtttttgcaatatatgcatagcaaacttcaaagtccattatatatagtaatcatgatata 21601370  T
Q  217 tgattatgccca----tggaatcatggtggtggtccaccgtgatttaatttagagatagcaataaagtgtatctttcagaaaatcacaagtgatcatcgt 312  Q
    ||||||||||||    ||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||   || |||||||    
T  21601369 tgattatgcccatatttggtatcatggtggtggtccaccgtgatttaatttacaga-agcaacaaagtgtatctttcaaaaaatcacggttggtcatcgt 21601271  T
Q  313 gattttaacat 323  Q
    |||||| ||||    
T  21601270 gattttgacat 21601260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 12421454 - 12421592
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctc 147  Q
    ||||||||||||||  || |||||||||||||||||||| || |||||| || |  |||  | | ||||||||| |||||||||||  ||||||||||||    
T  12421454 cttacccgaagccaggacaaacgcaatgcataaaagtccgaaaagaaaagatcggaaaaagtgtgttgccattttttgtgaagatttcatcttagagctc 12421553  T
Q  148 tattatcttttgtttttgcaatatgcatagcaaacttca 186  Q
    |||| | ||||||| |||  |||||||||||||||||||    
T  12421554 tattttattttgttcttgagatatgcatagcaaacttca 12421592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 21605109 - 21604944
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| ||||||||||||||| || | |||   |||||| |||||   ||||||||||||||| ||||||||||||||||||||||| ||||| |  |||    
T  21605109 aaatagaacttaaggttcaaaattaatatgtttcttacctgaagcttgaaccaacgcaatgcacaaaagtcccaagagaaaatattgggaaatgtggttt 21605010  T
Q  115 gccatttcttgtgaagattgtatcttagagct----ctattatcttttgtttttgcaatatgcata 176  Q
    ||||||| ||||||||||| |||||| || ||    ||| ||||||||||||| | ||||||||||    
T  21605009 gccattttttgtgaagattttatctttgaactcttgctactatcttttgttttcgaaatatgcata 21604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 21594265 - 21594404
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctc 147  Q
    |||||||||||| | ||||||||||||| | |||||| |||||| ||||||||| |  |||| ||||||||||| |  || ||||| ||||||||| |||    
T  21594265 cttacccgaagctagaaccaacgcaatgaacaaaagtgccaagaaaaaatattgggctatatgttttgccatttttcttgtagattttatcttagaactc 21594364  T
Q  148 tattatcttttgtttttgcaatatgcatagcaaacttcaa 187  Q
    |||||| ||||||| | | | ||||||  |||||||||||    
T  21594365 tattatattttgttctcgtattatgcaatgcaaacttcaa 21594404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 21587234 - 21587371
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatatt-gagaaatatattttgccatttcttgtgaagattgtatcttagagct 146  Q
    ||||||||| || | |||||||| |||| | |||||| |||||| || ||||| ||||| ||| |||| |||||| |  |  ||||| ||||||||| ||    
T  21587234 cttacccgatgctagaaccaacggaatgaacaaaagtgccaagaaaagatatttgagaa-tatgttttcccatttttcttttagattttatcttagaact 21587332  T
Q  147 ctattatcttttgtttttgcaatatgcatagcaaacttc 185  Q
    ||||||||||||||| ||||| ||||||| |||||||||    
T  21587333 ctattatcttttgttcttgcattatgcattgcaaacttc 21587371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 21581889 - 21581833
Alignment:
Q  65 ccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccattt 121  Q
    ||||||||||| | |||||||||| |||||||||||| ||||||| |||||||||||    
T  21581889 ccaacgcaatgaacaaaagtcccacgagaaaatattgggaaatatgttttgccattt 21581833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 24203830 - 24203938
Alignment:
Q  72 aatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctctattatcttttgtttttgcaatat 171  Q
    |||||| |||||||||||||||||| ||||  |||| | |||| |||||| ||||||| ||| ||||||  | |||||||||||| ||||  || |||||    
T  24203830 aatgcaaaaaagtcccaagagaaaagattggcaaatgtgtttttccattttttgtgaaaattttatctttcaactctattatcttatgttcgtgtaatat 24203929  T
Q  172 gcatagcaa 180  Q
    | |||||||    
T  24203930 ggatagcaa 24203938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 21611303 - 21611173
Alignment:
Q  71 caatgcataaaagtcccaagagaaaatattgagaaatatattttgcca--tttcttgtgaagattgtatcttagagctctattatcttttgtttttgcaa 168  Q
    ||||||| |||| ||||||||||||||||||  |||| | ||||||||  ||| ||||  ||||| ||||||||| |||| |||| ||||| | | ||||    
T  21611303 caatgcacaaaactcccaagagaaaatattggaaaatgtgttttgccattttttttgtttagattttatcttagaactctgttatattttgctctcgcaa 21611204  T
Q  169 tatgcatagcaaacttcaaattccattatatata 202  Q
    ||  ||||||| ||||||| || |||||||||||    
T  21611203 ta--catagcatacttcaagtt-cattatatata 21611173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 19603843 - 19603664
Alignment:
Q  23 aaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccat 119  Q
    |||||| |||||||||||||| |||   ||||||| |||| | ||||||| |||||||||||| |||||||||||||||||| ||||| | |||||||||    
T  19603843 aaacttgaggttcaaagttcatatgtttcttacccaaagctagaaccaacacaatgcataaaattcccaagagaaaatattgcgaaatgtgttttgccat 19603744  T
Q  120 ttcttgtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    || |||| || ||| ||||||||| |||||||||  |||||| | |||||||||||| |||||||||| || |||||||||    
T  19603743 tttttgttaaaattttatcttagaactctattattgtttgttctcgcaatatgcataacaaacttcaactt-cattatata 19603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 19617365 - 19617195
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgt----gaagattgtatcttaga 143  Q
    |||||||||||| | |||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||| || |    ||||||| |||||| ||    
T  19617365 cttacccgaagctagaaccaacgcaatgcataaaactccaaagagaaaatattggaaaatatattttgccattttttttttttgaagattttatctttga 19617266  T
Q  144 gctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata-tagtaatcatgatat 215  Q
    | | ||||||| |||||||| ||||||||||||||||||||||| || ||||||||| ||||| |||||||||    
T  19617265 gtt-tattatcgtttgttttcgcaatatgcatagcaaacttcaagtt-cattatatagtagtagtcatgatat 19617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 19549369 - 19549184
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| |||||||||||||||||||  |||   |||||| ||||  | |||||||||||||||||||| |||||||||| | || |||||||| | ||||    
T  19549369 aaatagaacttaaggttcaaagttcgtatgtttcttacctgaagttagaaccaacgcaatgcataaaattcccaagagacagtactgagaaatgtgtttt 19549270  T
Q  115 gccatttctt-gtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    ||||||| || ||||||||| ||| ||||| ||||||||||||||||| ||| |||||| ||| |||||||||| || |||||||||    
T  19549269 gccatttttttgtgaagattttattttagaactctattatcttttgttcttgaaatatgaataacaaacttcaagtt-cattatata 19549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 19653723 - 19653548
Alignment:
Q  27 ttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttct 123  Q
    ||||||||||||||||| |||   ||||||  |||  | |||||||||||||||||||| | |||||||| | || || ||||| | ||||||||||| |    
T  19653723 ttaaggttcaaagttcatatgtttcttacctaaagttagaaccaacgcaatgcataaaattgccaagagacagtactgggaaatgtgttttgccattttt 19653624  T
Q  124 tgtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    | |||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||| || |||||||||    
T  19653623 tatgaagattttatcttatagctctattatcttttgttttcgcaatatgcatagaaaactccaagtt-cattatata 19653548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 19609691 - 19609571
Alignment:
Q  63 aaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctctattatcttttgttt 162  Q
    ||||||| |||||||||||| |||||||||| |||| || ||||| | ||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  19609691 aaccaacacaatgcataaaattcccaagagacaatactgggaaatgtgttttgccattt-ttgtgaagattttatcttagagctctattattgtttgttt 19609593  T
Q  163 ttgcaatatgcatagcaaactt 184  Q
    | |||||||||| |||||||||    
T  19609592 tcgcaatatgcacagcaaactt 19609571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 19626212 - 19626093
Alignment:
Q  63 aaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctctattatcttttgttt 162  Q
    |||||||||||||||||||| | |||| ||| | || |||||||| | ||||||||||| || |||||||| ||||||| ||||||||||||||||||||    
T  19626212 aaccaacgcaatgcataaaattgccaatagacagtaatgagaaatgtgttttgccattttttatgaagattttatcttatagctctattatcttttgttt 19626113  T
Q  163 ttgcaatatgcatagcaaac 182  Q
    |  |||||||||||||||||    
T  19626112 tcacaatatgcatagcaaac 19626093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 19646727 - 19646593
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctc 147  Q
    |||||| ||||| | |||||||||||||||||||| | | |||||| | || ||  |||| | ||||||||||| || |||||||| ||||||| |||||    
T  19646727 cttacctgaagctagaaccaacgcaatgcataaaattgctaagagacagtactggaaaatgttttttgccattttttatgaagattttatcttatagctc 19646628  T
Q  148 tattatcttttgtttttgcaatatgcatagcaaac 182  Q
    ||||||||||||||||  |||||||||||||||||    
T  19646627 tattatcttttgttttcacaatatgcatagcaaac 19646593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 19581530 - 19581345
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| ||||||||||| |||||||| |||   |||||| ||||  | |||||| |||||| |||||| |||||||||||| || || ||||| | ||||    
T  19581530 aaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtactgggaaatgtgtttt 19581431  T
Q  115 gccatttctt-gtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    ||||||| || ||||| ||| |||||||   ||||||||| ||||||| | ||||||||||||||||||||||| || |||||||||    
T  19581430 gccatttttttgtgaaaattttatcttaagactctattattttttgttctcgcaatatgcatagcaaacttcaactt-cattatata 19581345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 19563619 - 19563430
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| |||||||||||||||||||| |||   |||||| ||||| | || |||| |||||||||||| |||||||||| | ||||| ||||| | ||||    
T  19563619 aaatagaacttaaggttcaaagttcatatgtttcttacctgaagctagaatcaacacaatgcataaaattcccaagagacagtattgggaaatgtgtttt 19563520  T
Q  115 gcca-tttcttgtgaaga----ttgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    |||| ||| |||||||||    || ||||||||| ||||||||||||||||| | | |||||| ||| |||||||||| || |||||||||    
T  19563519 gccatttttttgtgaagaattcttttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaagtt-cattatata 19563430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 19557367 - 19557193
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    |||| |||||||||||| |||||||| |||   |||||| ||||| | |||||| |||||| |||||| |||||||||| ||||||| |||||   |||     
T  19557367 aaattaaacttaaggttgaaagttcatatgtttcttacctgaagctagaaccaaggcaatgtataaaattcccaagagacaatattgggaaatgggtttc 19557268  T
Q  115 gccatttctt--gtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaa 187  Q
    | ||||| ||  ||||||||| ||||||||| ||||||||||||||||| | | |||||| ||| ||||||||||    
T  19557267 gacattttttttgtgaagattttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaa 19557193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 19539204 - 19539015
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| |||||||||||||||||||| |||   |||||| ||||| | |||||||||||||||||||| ||| |||||| | || ||  |||| | ||||    
T  19539204 aaatagaacttaaggttcaaagttcatatgtttcttacctgaagctagaaccaacgcaatgcataaaattcctaagagacagtactggaaaatgtgtttt 19539105  T
Q  115 gccatttctt-gtgaaga----ttgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    ||||||| || |||||||    || ||||||||| ||||||||||||||||| | | |||||| ||| |||||||||| || |||||||||    
T  19539104 gccatttttttgtgaagaattcttttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaagtt-cattatata 19539015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 19612339 - 19612236
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgccatttcttgtgaagattgtatcttagagctc 147  Q
    |||||| ||||| | ||||||||||||||| |||| |||||| ||| ||||||| ||||| | ||||||||||| ||||||||||| |||||||||| ||    
T  19612339 cttacctgaagctagaaccaacgcaatgcagaaaattcccaaaagacaatattgggaaatgtgttttgccattttttgtgaagattttatcttagagttc 19612240  T
Q  148 tatt 151  Q
    ||||    
T  19612239 tatt 19612236  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 19593642 - 19593490
Alignment:
Q  48 cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatattttgcca-tttcttgtgaagattgtatcttagagct 146  Q
    |||||| ||||| | |||||||||||||||||||| ||| |||||||||||||| ||||| | |  ||||| ||| |||||||  || ||||  ||| ||    
T  19593642 cttacctgaagctagaaccaacgcaatgcataaaattcctaagagaaaatattgggaaatgtgtcctgccatttttttgtgaattttttatccaagaact 19593543  T
Q  147 ctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    |||||||  |||||| | |||||||| |||||||||||||| || |||||||||    
T  19593542 ctattattgtttgttctcgcaatatgtatagcaaacttcaactt-cattatata 19593490  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 18479251 - 18479327
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaaga 91  Q
    ||||| ||||||||||| |||||||| |||   |||||| ||||| | |||||||||||||||||||| ||||||||    
T  18479251 aaatagaacttaaggttgaaagttcatatgtttcttacctgaagctagaaccaacgcaatgcataaaattcccaaga 18479327  T

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Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 18025313 - 18025128
Alignment:
Q  18 aaataaaacttaaggttcaaagttcagatg---cttacccgaagccataaccaacgcaatgcataaaagtcccaagagaaaatattgagaaatatatttt 114  Q
    ||||| ||| ||||||| |||||||| |||   |||||| || || | |||||||||||||||||||| | |||| ||| ||||||||||||||| ||||    
T  18025313 aaatagaacctaaggttgaaagttcatatgtttcttacctgaggctagaaccaacgcaatgcataaaattgccaacagacaatattgagaaatatgtttt 18025214  T
Q  115 gcca-tttcttgtgaagattgtatcttagagctctattatcttttgtttttgcaatatgcatagcaaacttcaaattccattatata 200  Q
    |||| ||| ||||||||||| ||||||||| ||||||||||||||||| |  ||||||| ||| ||||||| ||||| |||||||||    
T  18025213 gccatttttttgtgaagattttatcttagaactctattatcttttgttctcccaatatgaataacaaactttaaatt-cattatata 18025128  T

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