View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12326_high_10 (Length: 307)
Name: NF12326_high_10
Description: NF12326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12326_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 20 - 302
Target Start/End: Original strand, 11975850 - 11976132
Alignment:
| Q |
20 |
cagtggtggtcgtggacaattcttttaaaacatctttgagatcttttatggcattttgaattcttgagttgatggctttaagctgatgcttatgacgatc |
119 |
Q |
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| T |
11975850 |
cagtggtggtcgtggacaattcttttaaaacatctttgagatcttttatggcattttgaattcttgagttgatggctttaagctgatgcttatgacgatc |
11975949 |
T |
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| Q |
120 |
ggcttgaaacggagagaaagttcttttctgaggcttaagaataccggcatcgagttcctccaccaatttgttcagatctttgagggcagttttaaggttg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11975950 |
ggcttgaaacggagagaaagttcttttctgaggcttaagaataccggcatcgagttcctccaccaatttgttcagatctttgagggcagttttaaggttg |
11976049 |
T |
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| Q |
220 |
gacagaacctcatgacgttggacgtggttcttaaccaggtcttggattttttcaagagaagttataagttggttcttctcact |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
11976050 |
gacagaacctcatgacgttggacgtggttcttaaccaggtcttggattttttcaagagaagttataagttggttcttgtcact |
11976132 |
T |
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