View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12331_high_21 (Length: 240)
Name: NF12331_high_21
Description: NF12331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12331_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10472453 - 10472231
Alignment:
| Q |
1 |
tttatatactataatgtgatcttttttcttcttcgtaaatactaatgttgttacttgtttaaagaacatacaatttcattgtcaattttacacatacatt |
100 |
Q |
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| T |
10472453 |
tttatatactataatgtgatcttttttcttcttcgtaaatactaatgttattacttgtttaaagaacatacaattttattgtcaattttacacatacatt |
10472354 |
T |
|
| Q |
101 |
ttataagaatccattaatttgtcgtgctatcatcatcttagaactatattttaagactaatctacacaagtagtgaacgttctttaagtctattatcatt |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |
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| T |
10472353 |
ttataagaatccattaatttgtcgtgctatcctcatcttagaactatattttaagactaatttacacaagtagtgaacgtcctttaagtctatcatcatt |
10472254 |
T |
|
| Q |
201 |
tagatatacatgtacattgtaat |
223 |
Q |
| |
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||||||||||||||| ||||||| |
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| T |
10472253 |
tagatatacatgtactttgtaat |
10472231 |
T |
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