View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12337_low_1 (Length: 412)

Name: NF12337_low_1
Description: NF12337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12337_low_1
NF12337_low_1
[»] chr1 (20 HSPs)
chr1 (159-396)||(24065123-24065360)
chr1 (155-366)||(29115351-29115562)
chr1 (155-396)||(5185261-5185501)
chr1 (159-369)||(41117126-41117336)
chr1 (159-360)||(30033528-30033729)
chr1 (155-369)||(4614827-4615041)
chr1 (155-260)||(3603510-3603615)
chr1 (155-369)||(40490003-40490217)
chr1 (206-359)||(13288034-13288187)
chr1 (155-396)||(49702336-49702576)
chr1 (159-255)||(6507904-6508000)
chr1 (213-324)||(24083357-24083468)
chr1 (160-299)||(34696097-34696236)
chr1 (160-306)||(21701467-21701613)
chr1 (236-324)||(9361749-9361837)
chr1 (160-326)||(49372298-49372464)
chr1 (160-371)||(52147703-52147914)
chr1 (162-363)||(24427492-24427692)
chr1 (159-280)||(50309337-50309458)
chr1 (163-196)||(28385221-28385254)
[»] chr2 (19 HSPs)
chr2 (155-394)||(11818432-11818670)
chr2 (159-369)||(36641296-36641506)
chr2 (159-360)||(16206485-16206686)
chr2 (155-396)||(11553236-11553478)
chr2 (160-371)||(2058643-2058854)
chr2 (155-312)||(33650871-33651028)
chr2 (159-308)||(23379867-23380015)
chr2 (185-371)||(27267907-27268094)
chr2 (160-301)||(20661198-20661339)
chr2 (173-312)||(14231017-14231156)
chr2 (159-298)||(23761368-23761507)
chr2 (159-298)||(23789512-23789651)
chr2 (223-369)||(44886232-44886378)
chr2 (237-306)||(11502322-11502391)
chr2 (163-298)||(23762505-23762640)
chr2 (155-196)||(26501264-26501305)
chr2 (159-196)||(30848315-30848352)
chr2 (211-280)||(41655380-41655449)
chr2 (150-206)||(7895972-7896028)
[»] chr8 (22 HSPs)
chr8 (155-396)||(2246710-2246951)
chr8 (159-337)||(953639-953817)
chr8 (155-396)||(26931848-26932091)
chr8 (159-360)||(14505667-14505868)
chr8 (159-360)||(15990403-15990604)
chr8 (159-359)||(37590030-37590230)
chr8 (159-306)||(14657699-14657846)
chr8 (163-298)||(27978753-27978888)
chr8 (163-298)||(28036022-28036157)
chr8 (159-316)||(17837147-17837304)
chr8 (159-300)||(34723846-34723987)
chr8 (159-308)||(35285032-35285181)
chr8 (160-312)||(10601088-10601240)
chr8 (169-306)||(1186545-1186682)
chr8 (192-301)||(4518359-4518468)
chr8 (169-317)||(19299024-19299172)
chr8 (175-299)||(42080471-42080595)
chr8 (160-280)||(23558678-23558798)
chr8 (159-200)||(7670232-7670273)
chr8 (159-196)||(13700129-13700166)
chr8 (159-196)||(22897971-22898008)
chr8 (155-187)||(19382633-19382665)
[»] chr6 (15 HSPs)
chr6 (155-396)||(23508839-23509080)
chr6 (166-394)||(16416513-16416741)
chr6 (159-360)||(34355737-34355938)
chr6 (159-306)||(1493235-1493382)
chr6 (155-306)||(9959227-9959378)
chr6 (169-262)||(187079-187172)
chr6 (159-308)||(31029126-31029275)
chr6 (160-312)||(30140932-30141084)
chr6 (155-276)||(13768183-13768304)
chr6 (244-324)||(13825454-13825534)
chr6 (213-324)||(10910512-10910623)
chr6 (159-306)||(16890210-16890357)
chr6 (213-369)||(30588912-30589068)
chr6 (160-201)||(35087841-35087882)
chr6 (160-196)||(6695689-6695725)
[»] chr4 (22 HSPs)
chr4 (155-396)||(13685918-13686159)
chr4 (155-364)||(37061038-37061247)
chr4 (159-360)||(30190940-30191141)
chr4 (159-360)||(30859309-30859510)
chr4 (159-336)||(16431348-16431525)
chr4 (159-360)||(55227558-55227759)
chr4 (163-369)||(16582335-16582541)
chr4 (155-312)||(54027691-54027848)
chr4 (160-363)||(18878117-18878320)
chr4 (162-306)||(20527775-20527919)
chr4 (155-306)||(4235313-4235464)
chr4 (155-312)||(27087436-27087593)
chr4 (155-312)||(27066335-27066492)
chr4 (160-312)||(12355218-12355370)
chr4 (160-308)||(34301807-34301955)
chr4 (169-317)||(54823658-54823806)
chr4 (155-396)||(4462486-4462723)
chr4 (258-363)||(14263982-14264087)
chr4 (169-330)||(26949203-26949363)
chr4 (275-312)||(27066649-27066686)
chr4 (275-312)||(27066843-27066880)
chr4 (159-199)||(11790857-11790897)
[»] chr7 (21 HSPs)
chr7 (155-396)||(33611022-33611263)
chr7 (155-369)||(48100729-48100943)
chr7 (159-317)||(13014956-13015114)
chr7 (159-369)||(15633166-15633376)
chr7 (155-382)||(48770036-48770263)
chr7 (159-359)||(32480162-32480362)
chr7 (159-296)||(3896475-3896612)
chr7 (159-308)||(47081645-47081794)
chr7 (159-307)||(8118792-8118940)
chr7 (155-371)||(11343028-11343243)
chr7 (162-301)||(24226203-24226342)
chr7 (159-316)||(30502496-30502653)
chr7 (159-324)||(17238666-17238831)
chr7 (160-363)||(41601376-41601579)
chr7 (159-361)||(27458083-27458285)
chr7 (212-316)||(3205177-3205281)
chr7 (155-268)||(27810574-27810687)
chr7 (155-216)||(26016618-26016679)
chr7 (163-296)||(3960065-3960198)
chr7 (159-196)||(29961970-29962007)
chr7 (155-196)||(42510026-42510067)
[»] chr5 (20 HSPs)
chr5 (155-396)||(19237576-19237811)
chr5 (159-371)||(2157770-2157982)
chr5 (159-360)||(22292325-22292526)
chr5 (160-371)||(19741524-19741735)
chr5 (155-396)||(36044827-36045068)
chr5 (155-267)||(23622542-23622654)
chr5 (155-376)||(29955453-29955671)
chr5 (160-312)||(29754948-29755099)
chr5 (159-317)||(18759705-18759862)
chr5 (225-371)||(34919988-34920134)
chr5 (163-312)||(5335206-5335355)
chr5 (162-360)||(28246203-28246405)
chr5 (203-299)||(40299909-40300005)
chr5 (288-394)||(23622432-23622538)
chr5 (160-241)||(13948783-13948864)
chr5 (160-203)||(16088654-16088697)
chr5 (159-360)||(21092153-21092351)
chr5 (155-185)||(16569540-16569570)
chr5 (159-187)||(7871937-7871965)
chr5 (250-306)||(16088569-16088625)
[»] chr3 (26 HSPs)
chr3 (155-369)||(49499347-49499561)
chr3 (159-369)||(16739423-16739633)
chr3 (155-318)||(18357095-18357259)
chr3 (159-356)||(6006028-6006225)
chr3 (159-363)||(17790095-17790299)
chr3 (159-363)||(19098537-19098741)
chr3 (156-254)||(35906922-35907020)
chr3 (159-308)||(8566012-8566161)
chr3 (159-360)||(31228184-31228385)
chr3 (150-267)||(36144765-36144882)
chr3 (160-294)||(29372946-29373080)
chr3 (155-369)||(18342570-18342786)
chr3 (163-363)||(31809105-31809305)
chr3 (160-306)||(31935240-31935386)
chr3 (160-298)||(31973506-31973644)
chr3 (170-306)||(31660977-31661113)
chr3 (159-306)||(19602912-19603059)
chr3 (163-361)||(38015060-38015257)
chr3 (159-317)||(53437525-53437682)
chr3 (249-394)||(19770609-19770754)
chr3 (159-316)||(53394825-53394981)
chr3 (159-196)||(4479866-4479903)
chr3 (159-196)||(14485654-14485691)
chr3 (334-378)||(36144722-36144766)
chr3 (159-196)||(16877963-16878000)
chr3 (163-196)||(45004299-45004332)
[»] scaffold0031 (1 HSPs)
scaffold0031 (150-364)||(44418-44633)
[»] scaffold0341 (2 HSPs)
scaffold0341 (159-255)||(1929-2025)
scaffold0341 (159-255)||(9585-9681)
[»] scaffold0040 (1 HSPs)
scaffold0040 (159-316)||(62481-62638)
[»] scaffold0643 (1 HSPs)
scaffold0643 (160-312)||(1042-1194)
[»] scaffold0019 (1 HSPs)
scaffold0019 (163-299)||(73335-73471)
[»] scaffold0011 (1 HSPs)
scaffold0011 (213-324)||(191051-191162)
[»] scaffold0789 (1 HSPs)
scaffold0789 (160-306)||(4210-4356)
[»] scaffold0013 (1 HSPs)
scaffold0013 (202-312)||(42466-42576)
[»] scaffold0198 (1 HSPs)
scaffold0198 (159-218)||(21815-21874)


Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 159 - 396
Target Start/End: Complemental strand, 24065360 - 24065123
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24065360 atgcttatagcatttcattaataataagaagttcaatacaatcgggtatgtgaaaataaacaacgggactagctagtaacgtggcttctcctgcaagaac 24065261  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24065260 atgagcaacctcgtttgcttgtcgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccggcatgatgagataatgcacccaaat 24065161  T
Q  359 tcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24065160 tcagaagtgtcatctcgattagcatggaaggcatcaca 24065123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 155 - 366
Target Start/End: Complemental strand, 29115562 - 29115351
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| |||| |||||||||||| |||||| ||| ||| |||||| ||||||||||||||  |||||||||||||||||   |||| | ||     
T  29115562 aaatatgcttatatcattgcattaataataagaggttccatacaatcgggtatatgaaaataaacaacatgactagctagtaacgtgacctctcttacag 29115463  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||  |    
T  29115462 gaacatgagcaacctcgtttgcttgtcgtctaacaaactacaccctagagttggtaaagaaagaactgaacaaagaccgacaagatgagataatgcactc 29115363  T
Q  355 aaattcagaagt 366  Q
    ||||||| ||||    
T  29115362 aaattcaaaagt 29115351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 396
Target Start/End: Original strand, 5185261 - 5185501
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||||||||||||||||||||| |  ||||||||| | |||||| | ||||||||   ||||||||||| |||| |||  ||||| |||||    
T  5185261 aaatatgcttataacatttcattaataataagatattcaatatattcgggtatataaaaataaatggcgggactagctggtaatgtgacttctcttgcaa 5185360  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||| ||||||| || | |||| || ||||||||||||||||| |||||||||||||| || |||  ||||  ||||||||  | |||||||||||    
T  5185361 gaacatgaacaacctcattggtttgtcgcttaacaaactccaccctagagttggtaaagaaa-aattaactagagtacgacatgaaaaaataatgcatcc 5185459  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    |||||||||   ||| |||||| ||| |||||||||||||||    
T  5185460 aaattcagagtagtcgtctcgagtagtatggaaggcatcaca 5185501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 369
Target Start/End: Complemental strand, 41117336 - 41117126
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| || |||| |||||||||| | |||||||||   |||||||||||||||||||| ||||| ||||||| |    
T  41117336 atgcttatagcatttcattgataataatagtttgaatacaattgggtatctcaaaataaacggtgggactagctagtaacgtggcttctcttgcaagagc 41117237  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||||| || |||||| |||||||||||||||||| | |||||| ||| |||| | ||||||  || ||||| || || |||||||| ||||||    
T  41117236 atgagcaacctcattggcttgtcgcctaacaaactccacccgagagttggaaaataaagcagtaaacaacgaacgacaagaagaaataatgcagccaaat 41117137  T
Q  359 tcagaagtgtc 369  Q
    || || |||||    
T  41117136 tcggatgtgtc 41117126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 30033729 - 30033528
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || |||||||||||||||||| | |||||||||  ||||||||||||   ||||||  || | ||||||| |    
T  30033729 atgcttatagcatttcatttataataagagtttcaatataattgggtatattaaaataaacggcgggactagctaaagacgtggcctcccttgcaagagc 30033630  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| || | |||||| |||||||||||||||||||| |||| | |||||||| | | |||| ||| |||||||| || |||||||||||||||    
T  30033629 atgagcaaccacgctggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtattgaacaaagaacgacatgaggaaataatgcatccaaat 30033530  T
Q  359 tc 360  Q
    ||    
T  30033529 tc 30033528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 155 - 369
Target Start/End: Complemental strand, 4615041 - 4614827
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| |||||| |||||||||||||||  || ||||||| ||| || ||||| ||||| |||||||| ||||| ||| ||||||| |||| ||||||    
T  4615041 aaatatgtttataaaatttcattaataatacgagattcaatacaatcggttatgttaaaatcaacaacggaactagttagaaacgtggcttcttctgcaa 4614942  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    | |||||||||||| | |||| |||| ||||| |||||||||||||| |||||||||| |||||  | || ||||| ||||| || || ||||||||  |    
T  4614941 gcacatgagcaaccacatttgtttgtcgcctagcaaactccaccctagagttggtaaaaaaagagttgaatagagatcgacaagaagaaataatgcactc 4614842  T
Q  355 aaattcagaagtgtc 369  Q
    |||||||||| ||||    
T  4614841 aaattcagaattgtc 4614827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 3603510 - 3603615
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||| | |||| |||||||||||||||||| |||||||||||||||  ||||||||||    
T  3603510 aaatatgtttataacatttcattaataataagaggttcaatacaatcgtgtatatgaaaataaacaacgggagtagctagtaacgtggcctctcctgcaa 3603609  T
Q  255 gaacat 260  Q
    ||||||    
T  3603610 gaacat 3603615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 155 - 369
Target Start/End: Original strand, 40490003 - 40490217
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||  ||||||||| ||||||| || ||||||||| |  ||||| | |||||||||| |||||||| ||||||||| |  ||||| |||||    
T  40490003 aaatatgtttatgtcatttcattgataataagagtttcaatatattccggtatatcaaaataaacagcgggactaactagtaacgcgacttctcttgcaa 40490102  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    || ||||||| ||||| || | |||| |||||||||||||||||||| |||| | |||||| || ||||| | ||| |||||||| || || || || ||    
T  40490103 gagcatgagcgacctcattggtttgtcgcctaacaaactccaccctagagttagaaaagaatgagctaaataaagaacgacatgaggaaatgatacagcc 40490202  T
Q  355 aaattcagaagtgtc 369  Q
    ||||||  |||||||    
T  40490203 aaattcgaaagtgtc 40490217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 359
Target Start/End: Complemental strand, 13288187 - 13288034
Alignment:
Q  206 atgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagt 305  Q
    |||| |||||||||||||||||||||||| ||  ||| |||||||||||| |||||||||||| | |||| |||| ||||| |||||||||||||| |||    
T  13288187 atgttaaaataaacaacgggactagctagaaatatggcttctcctgcaagcacatgagcaaccgcatttgtttgtcgcctagcaaactccaccctagagt 13288088  T
Q  306 tggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    |||||||  |||| || || ||| | ||||| || || |||||||| |||||||    
T  13288087 tggtaaaagaagagctgaaaagaaatcgacaagaagaaataatgcacccaaatt 13288034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 49702576 - 49702336
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||| ||| ||||||||||||| |||||||||| |||  ||||| | |||||||||||  ||| ||  ||||||  ||  | || ||||||    
T  49702576 aaatatgtttatagcatctcattaataataagaggttcaatacaatctggtatattaaaataaacaattggattatttagtaatatgtct-cttctgcaa 49702478  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
     |||||||| |||| ||||  | |||  ||||||||||| || |||| |||||||||||||| |||  || |||||||||||||| |||||||| ||  |    
T  49702477 taacatgagaaaccccgttgacatgtcacctaacaaacttcatcctagagttggtaaagaaataaccgaaaagagaccgacatgaagagataatacactc 49702378  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||| ||||||||| |||||| |||| || || ||||||||    
T  49702377 aaatttagaagtgtcgtctcgagtagcgtgaaaagcatcaca 49702336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 6507904 - 6508000
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaag 255  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||| | |||||||||||||||||  |||| |||||||    
T  6507904 atgcttataacatttcattaataataacaggttcaatacatttgggtatattaaaataaacaaagagactagctagtaacgtgacttcttctgcaag 6508000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 24083468 - 24083357
Alignment:
Q  213 aataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| | ||||||||||||  ||||||| ||||| ||||||  ||||||||||| |||| |||||| ||||||||||||||||| || |||| | |||    
T  24083468 aataaatagcgggactagctaagaacgtggcttctcttgcaagtgcatgagcaaccgcgttggcttgtcgcctaacaaactccaccgtagagttagaaaa 24083369  T
Q  313 gaaagaactaaa 324  Q
    ||||||||||||    
T  24083368 gaaagaactaaa 24083357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 299
Target Start/End: Original strand, 34696097 - 34696236
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||| ||||||||||| | || ||||||| ||| |||||| ||||||||||||||| |||||||||| |||||||  |||||| | |||  |    
T  34696097 tgcttatatcatatcattaataatcaaagtttcaatacaatggggtatatgaaaataaacaacgagactagctagaaacgtggtctctccttcgagagta 34696196  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccc 299  Q
    ||||||||| | ||| |||||  |||| ||||||||||||    
T  34696197 tgagcaaccacattttcttgtctcctagcaaactccaccc 34696236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 306
Target Start/End: Original strand, 21701467 - 21701613
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| |||||||||||| |||| || ||||||| ||||| |||| | | |||||||  ||||||||||||   ||||||  |||| || |||| ||    
T  21701467 tgcttatagcatttcattaatcataagagtttcaatacaattgagtatatcataataaacggcgggactagctaaagacgtggcctctcgtgaaagagca 21701566  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    ||||||||| |||| |||| | |||||||||||||||||||| ||||    
T  21701567 tgagcaaccacgttggcttatcgcctaacaaactccaccctagagtt 21701613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 9361837 - 9361749
Alignment:
Q  236 aacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaa 324  Q
    ||||||| ||||| ||||||  ||||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||||||||||    
T  9361837 aacgtggcttctcttgcaagtgcatgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagaactaaa 9361749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 49372464 - 49372298
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||| ||||||| || ||||||| |||||||||| | | ||||||||  |||||||| || |||||||| || || ||||||  ||    
T  49372464 tgcttatagcatttcattgataataagagtttcaatacaattgggtattttataataaacagtgggactagatattaacgtggcttttcttgcaagtgca 49372365  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaaca 326  Q
    |||||||||  ||| | |||| | |||||||||| || |||| || | | ||| |||||| ||||||    
T  49372364 tgagcaaccatgttagtttgtcgtctaacaaacttcatcctatagctagaaaataaagaaataaaca 49372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 371
Target Start/End: Original strand, 52147703 - 52147914
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    ||||||||  |||| ||| ||||||| || ||||||| || || |||| | | |||||||  || |||||||||||||| ||| ||||| |||||||  |    
T  52147703 tgcttatagtattttattgataataagagtttcaatacaaatgagtatttcataataaaccgcgcgactagctagtaacatggcttctcttgcaagagaa 52147802  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    || ||||||  ||| |||||| || ||||||||| |||| || |||||| ||| |||| | |||||| ||| | ||| || || |||||||| || ||||    
T  52147803 tgggcaaccctgttagcttgtcgcataacaaacttcaccttagagttggaaaataaagcagtaaacaaagaacaacaagaagaaataatgcagccgaatt 52147902  T
Q  360 cagaagtgtcat 371  Q
    | || |||||||    
T  52147903 cggacgtgtcat 52147914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 363
Target Start/End: Original strand, 24427492 - 24427692
Alignment:
Q  162 cttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatg 261  Q
    |||||| |||||  || ||||||| || ||||||| ||| | |||| | |||||||||| | |||  |||||| || |||| ||||| |||||||  |||    
T  24427492 cttatagcatttacttgataataagagtttcaatacaat-gagtatttcaaaataaacagcaggatcagctaggaatgtggtttctcttgcaagagtatg 24427590  T
Q  262 agcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattca 361  Q
    ||| ||||| || |||||| |||||| |||||| |||||| |||| | ||| |||||| |||||| ||| | ||| || || |||||| | |||||||||    
T  24427591 agcgacctcattggcttgtcgcctaataaactcgaccctagagttagaaaataaagaagtaaacaaagaacaacaagaagaaataatgaaaccaaattca 24427690  T
Q  362 ga 363  Q
    ||    
T  24427691 ga 24427692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 50309458 - 50309337
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||| | |||||||||||||||||| | |||||||  |||| |||||| | ||||||| ||||  |||||||   ||||||  ||||  |||||| |    
T  50309458 atgcttaaagcatttcattaataataatggattcaatactattgagtatgtcataataaactacggagctagctaaggacgtggtatctctcgcaagagc 50309359  T
Q  259 atgagcaacctcgtttgcttgt 280  Q
     |||||||||||||| ||||||    
T  50309358 gtgagcaacctcgttggcttgt 50309337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 28385254 - 28385221
Alignment:
Q  163 ttataacatttcattaataataataggttcaata 196  Q
    |||||||||||||||||||||||||| |||||||    
T  28385254 ttataacatttcattaataataatagtttcaata 28385221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 155 - 394
Target Start/End: Original strand, 11818432 - 11818670
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  11818432 aaatatgcttatagcatttcattaataataagaggttcaatataattgggtatctgaaaataaataacgggactagctagtaacgtggcttctcctgcaa 11818531  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  11818532 gaacatgagcaacctcgtttgcttgtcgcctaacaaactccaccctagagttggtaaagaaagaactaaacagagactgacatgatgagataatgcaccc 11818631  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatca 394  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  11818632 aaattcag-agtgtcatctcgattagcatggaaggcatca 11818670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 369
Target Start/End: Complemental strand, 36641506 - 36641296
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    |||||||||  |||||||| |||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||  ||||||| |    
T  36641506 atgcttatagtatttcattgataataataatttcaatataattgggtatctcaaaataaacaacgggactagctagtaatgtggcttcttttgcaagagc 36641407  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    ||||||||||||||| |||||| |||||||||||||||||| | |||||  ||| |||| | | ||||  || ||||| || || |||||||| ||||||    
T  36641406 atgagcaacctcgttggcttgtcgcctaacaaactccacccgagagttgaaaaataaagcagtgaacaacgaacgacaagaagaaataatgcagccaaat 36641307  T
Q  359 tcagaagtgtc 369  Q
    || || |||||    
T  36641306 tcggatgtgtc 36641296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 16206686 - 16206485
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   ||||||  || | ||||||| |    
T  16206686 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagacgtggcctcccttgcaagagc 16206587  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| | | |||| ||| ||||| || || |||||||||||||||    
T  16206586 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtaatgaacaaagaacgacaggaggaaataatgcatccaaat 16206487  T
Q  359 tc 360  Q
    ||    
T  16206486 tc 16206485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 11553478 - 11553236
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||||||||||||  |||||||||||||||| || ||||||||| | |||||| ||||||||||    ||||||||||||||| |||| ||||||||| |    
T  11553478 aaatatgcttatagtatttcattaataataagagtttcaatatattcgggtatatgaaaataaatggtgggactagctagtaatgtggcttctcctgcga 11553379  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaa-gaactaaacagagaccgacatgatgagataatgcatc 353  Q
    |||||||| ||||||| || |||||| ||| |  ||||||||||||| |||||||||| ||| || ||||  |||   |||||||| || ||||| || |    
T  11553378 gaacatgatcaacctcattagcttgtcgccgagtaaactccaccctagagttggtaaaaaaaagagctaactagactgcgacatgaagaaataatacagc 11553279  T
Q  354 caaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    |||| | ||||  ||| |||||| ||||||| |||||||||||    
T  11553278 caaacttagaatagtcgtctcgagtagcatgaaaggcatcaca 11553236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 371
Target Start/End: Complemental strand, 2058854 - 2058643
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||||||||| ||| ||||||| || ||||||| |||||||||| | | |||||||| ||||| |||||| |||||| | ||||| ||||||| ||    
T  2058854 tgcttataacatttaattgataataagagtttcaatacaattgggtatatcataataaacagcgggattagctaataacgtagtttctcttgcaagagca 2058755  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    |||| ||||  ||| | |||| ||||||||||||||||| || |||| | ||||||||| ||||| ||  | ||||| ||||| |||||| | |||||||    
T  2058754 tgagtaaccgtgttggtttgtcgcctaacaaactccaccttagagttcgaaaagaaagagctaaatagtaaacgacaagatgaaataatggaaccaaatt 2058655  T
Q  360 cagaagtgtcat 371  Q
    |||| |||||||    
T  2058654 cagatgtgtcat 2058643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 312
Target Start/End: Complemental strand, 33651028 - 33650871
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||| | ||||||||||||||||| |  |||||||  ||||||||||| |||||||||||||||||||||||| ||||||  |||| ||||||    
T  33651028 aaatatgtttagagcatttcattaataataagatattcaatacgattgggtatgttaaaataaacaacgggactagctagaaacgtgacttcttctgcaa 33650929  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    | |||||| ||||| | ||||||||||||||  |||||| ||| ||| ||||||||||    
T  33650928 gcacatgaacaaccgcatttgcttgttgcctggcaaacttcactctagagttggtaaa 33650871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 23380015 - 23379867
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||| |||||||||||| |||  ||||| ||| ||| |    
T  23380015 atgcttataacatttcattaataataatagtttcaatacaattgggtattttaaaataaacagcggaactagctagtaatgtgacttctcttgcgagagc 23379916  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    || | |||||||||| || |||  ||||| ||||||||||||| ||||||    
T  23379915 ataaacaacctcgttggc-tgtcacctaataaactccaccctagagttgg 23379867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 371
Target Start/End: Original strand, 27267907 - 27268094
Alignment:
Q  185 ataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcc 284  Q
    |||| ||||||| |||||||||| | | ||||||||| ||||||| |||||||||||| ||||| ||||||   ||||||||||||||| ||||||  ||    
T  27267907 atagtttcaatacaattgggtatttcataataaacaatgggactaactagtaacgtggcttctcttgcaagtgtatgagcaacctcgttagcttgtcacc 27268006  T
Q  285 taacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgc-atccaaattcagaagtgtcat 371  Q
    ||||||||||||||||| |||| | ||| |||||| |||||| |||  |||| || || ||||||| | |||||||| || |||||||    
T  27268007 taacaaactccaccctagagttagaaaataaagaaataaacaaagaatgacaagaagaaataatgcaaaccaaattcggacgtgtcat 27268094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 301
Target Start/End: Complemental strand, 20661339 - 20661198
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||| ||||| | || ||||||| |||||||||||| | |||| ||| |||||||||||||||||||||  |||| ||||||| ||    
T  20661339 tgcttatagcatttcattgataatcaaagattcaatacaattgggtatgtcataatagacagcgggactagctagtaacgtggtgtctcttgcaagagca 20661240  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccacccta 301  Q
    |||||||||  |||  |||||  |||||||||||||||||||    
T  20661239 tgagcaaccctgttaacttgtcacctaacaaactccacccta 20661198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 312
Target Start/End: Complemental strand, 14231156 - 14231017
Alignment:
Q  173 tcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgt 272  Q
    ||||||||||| | || ||||||| |||||||||| |||||||| | |||||||||||| || || |||| ||| | |||||||   ||||| ||| | |    
T  14231156 tcattaataatcaaagtttcaatacaattgggtatatgaaaatagataacgggactagcgagaaatgtggcttcccttgcaagagtgtgagccaccacat 14231057  T
Q  273 ttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    | |||||| |||||||||||||||| ||| ||||||||||    
T  14231056 tagcttgtcgcctaacaaactccactctagagttggtaaa 14231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 298
Target Start/End: Original strand, 23761368 - 23761507
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||| | || ||||||| ||| |||||| | | |||||||  |||||||||  ||||||  ||  |||| ||||||| |    
T  23761368 atgcttatagcatttcattgataatcagagtttcaatacaatcgggtatatcataataaacggcgggactagtgagtaacaaggtatctcttgcaagagc 23761467  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    |||||||| | ||||||||||| |||||||||||||||||    
T  23761468 atgagcaatcccgtttgcttgtcgcctaacaaactccacc 23761507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 298
Target Start/End: Original strand, 23789512 - 23789651
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||| | || ||||||| ||| |||||| | | |||||||  |||||||||  ||||||  ||  |||| ||||||| |    
T  23789512 atgcttatagcatttcattgataatcagagtttcaatacaatcgggtatatcataataaacggcgggactagtgagtaacaaggtatctcttgcaagagc 23789611  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    |||||||| | ||||||||||| |||||||||||||||||    
T  23789612 atgagcaatcccgtttgcttgtcgcctaacaaactccacc 23789651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 369
Target Start/End: Complemental strand, 44886378 - 44886232
Alignment:
Q  223 gggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaacta 322  Q
    |||| ||||||  ||||||| ||||| ||||||  ||||||||||| ||||  ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  44886378 gggattagctaagaacgtggcttctcttgcaagtgcatgagcaaccgcgttgacttgtcgcctaacaaactccaccctagagttagaaaagaaagaacta 44886279  T
Q  323 aacagagaccgacatgatgagataatgcatccaaattcagaagtgtc 369  Q
    || ||  | ||||| ||||| |||||  | |||||||| || |||||    
T  44886278 aaaagcaaacgacaagatgaaataatagagccaaattcggatgtgtc 44886232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 11502391 - 11502322
Alignment:
Q  237 acgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||||| ||||| |||||||  |||||||||| |||| |||||| |||||||||||||||||||| ||||    
T  11502391 acgtggcttctcttgcaagagtatgagcaaccacgttggcttgtcgcctaacaaactccaccctagagtt 11502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 298
Target Start/End: Original strand, 23762505 - 23762640
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||| ||||||||| ||||| | || ||||||| ||| |||||| | | |||||||  |||||||||| ||||||  ||   ||| ||||||| || ||    
T  23762505 ttatagcatttcattgataatcagagtttcaatacaatcgggtatattataataaacggcgggactagcaagtaacaaggccactcttgcaagagcacga 23762604  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    |||| | |||| |||||| |||||||||||||||||    
T  23762605 gcaatcccgttagcttgtcgcctaacaaactccacc 23762640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 26501264 - 26501305
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaata 196  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||    
T  26501264 aaatatgtttatagcatttcatttataataataggttcaata 26501305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 30848352 - 30848315
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  30848352 atgcttatagcatttcattaataataatagattcaata 30848315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 41655380 - 41655449
Alignment:
Q  211 aaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgt 280  Q
    |||||||| |||||||||||||| ||| |||| ||||||||||||  | ||| ||||||| ||| |||||    
T  41655380 aaaataaataacgggactagctaataatgtggcttctcctgcaagtgcgtgaccaacctcattttcttgt 41655449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 7895972 - 7896028
Alignment:
Q  150 aaagcaaatatgcttataacatttcattaataataataggttcaatataattgggta 206  Q
    |||| |||||||||||||||||||||||| |||||| ||  |||||| ||| |||||    
T  7895972 aaagaaaatatgcttataacatttcattagtaataacagagtcaatacaatcgggta 7896028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 155 - 396
Target Start/End: Original strand, 2246710 - 2246951
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||  ||||||||||||||||||||  |||||||||||||| ||  |||||||||||    
T  2246710 aaatatgcttatagcatttcattaataataagaggttcaatacaatcaggtatgtgaaaataaacaacatgactagctagtaacatgacttctcctgcaa 2246809  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  2246810 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctagagttggtaaagaaagaattaaacagagaccgacatgatgagataatgcaccc 2246909  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  2246910 aaattcagaagtgtcatctcgattagcatgggaggcatcaca 2246951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 953817 - 953639
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||| ||| ||||| ||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  953817 atgctcatagcattttattaataataagaggttcaatacaattagatatgtgaaaataaacaacgggactagctagtaacgtgacttctcctgcaagaac 953718  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacat 337  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  953717 atgagcaaactcgtttgcttgtcgctaaacaaactccaccctaaaattaataaagaaagaactaaacagagaccgacat 953639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 155 - 396
Target Start/End: Original strand, 26931848 - 26932091
Alignment:
Q  155 aaatatgcttataacatttcattaata--ataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgc 252  Q
    ||||||||||||| |||||||||||||  |||| || ||||||| | | || ||| ||||||||||   || ||||||||||||| |||| |||||||||    
T  26931848 aaatatgcttatatcatttcattaatataataagagattcaatacattcggatatatgaaaataaatggcgagactagctagtaatgtggcttctcctgc 26931947  T
Q  253 aagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcat 352  Q
    |||||||||| |||| || || |||||||||||||||||||| |||||| |||||||||||||||||||||  ||||  ||||| || || ||||||||     
T  26931948 aagaacatgaacaacttcattggcttgttgcctaacaaactctaccctagagttggtaaagaaagaactaactagagtacgacaggaagaaataatgcac 26932047  T
Q  353 ccaaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    |||||||||||   ||| | || | ||| |||||||||||||||    
T  26932048 ccaaattcagagcagtcgtatcaagtagtatggaaggcatcaca 26932091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 14505868 - 14505667
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   ||||||  || | ||||||| |    
T  14505868 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagacgtggcctcccttgcaagagc 14505769  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  14505768 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 14505669  T
Q  359 tc 360  Q
    ||    
T  14505668 tc 14505667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 360
Target Start/End: Original strand, 15990403 - 15990604
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   ||||||  || | ||||||| |    
T  15990403 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagacgtggcctcccttgcaagagc 15990502  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||  |||||| |||||||||||||||||||| |||| | |||||||| | | |||| ||| ||||| || || |||||||||||||||    
T  15990503 atgagcaaccacgtaggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtaatgaacaaagaacgacaggaggaaataatgcatccaaat 15990602  T
Q  359 tc 360  Q
    ||    
T  15990603 tc 15990604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 159 - 359
Target Start/End: Original strand, 37590030 - 37590230
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || ||||||| |||||||||| | |||||||||  ||| ||||||||   ||||||  || | ||||||| |    
T  37590030 atgcttatagcatttcattaataataagagtttcaatacaattgggtatattaaaataaacggcggaactagctaaagacgtggcctcccttgcaagagc 37590129  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||  ||| |||| ||| ||||  || || | |||||||||||||    
T  37590130 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaaatactgaacaaagaacgacgggaggaaacaatgcatccaaat 37590229  T
Q  359 t 359  Q
    |    
T  37590230 t 37590230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 14657699 - 14657846
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||| || ||||||| |||| ||||| | ||||||||||| | |||| ||||||||||||| ||||| ||||||| |    
T  14657699 atgcttatagcatttcattgattataagagtttcaatacaattaggtatatcaaaataaacaatgtgactggctagtaacgtggcttctcttgcaagagc 14657798  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||||  |||| ||| |||||| |||||||||||||||||||| ||||    
T  14657799 atgagataccttgttggcttgtcgcctaacaaactccaccctagagtt 14657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 298
Target Start/End: Complemental strand, 27978888 - 27978753
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||| | | ||||||| | |||||||||||   ||||||  |||| ||||||| |||||    
T  27978888 ttataacatttcattaatcataatagtttcaataaaattgggtatatcataataaacgaagggactagctaaagacgtggcctctcgtgcaagagcatga 27978789  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    |||||| |||| |||||| |||||||||||||||||    
T  27978788 gcaaccgcgttggcttgtagcctaacaaactccacc 27978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 298
Target Start/End: Complemental strand, 28036157 - 28036022
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||| | | ||||||| | |||||||||||   ||||||  |||| ||||||| |||||    
T  28036157 ttataacatttcattaatcataatagtttcaataaaattgggtatatcataataaacgaagggactagctaaagacgtggcctctcgtgcaagagcatga 28036058  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    |||||| |||| |||||| |||||||||||||||||    
T  28036057 gcaaccgcgttggcttgtagcctaacaaactccacc 28036022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 17837147 - 17837304
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||| | || ||||||||||| |||||| |  ||||||||  | ||||||||||   |||||| ||||| |||||||      
T  17837147 atgcttatagcatttcattaataattaaagattcaatataatcgggtatatcgaaataaacggcaggactagctaaagacgtggcttctcttgcaagagt 17837246  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaa 316  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||    
T  17837247 atgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaa 17837304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 34723846 - 34723987
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||| | |||||||||||| ||||||| ||||||| |||||||||| | | |||||||  || |||||||||   |||||| ||||| |||||||      
T  34723846 atgcttagagcatttcattaatcataatagattcaatacaattgggtatatcataataaacggcgagactagctaaagacgtggcttctcttgcaagagt 34723945  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccct 300  Q
    |||||||||| |||| |||||| |||||||||||||||||||    
T  34723946 atgagcaaccacgttggcttgtcgcctaacaaactccaccct 34723987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 35285181 - 35285032
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||||||  |||||| |||||||||| | | |||| ||| ||||||||||||   ||||||  |||| |||||||      
T  35285181 atgcttatagcatttcattgatcataatagcctcaatacaattgggtatatcataatagacagcgggactagctaaggacgtggcctctcgtgcaagagt 35285082  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    |||||| ||| |||| |||||| |||||||||||||||||||| ||||||    
T  35285081 atgagccaccgcgttagcttgtcgcctaacaaactccaccctagagttgg 35285032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 312
Target Start/End: Complemental strand, 10601240 - 10601088
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| |||||||||| |||| | || |||||||||||||||||| |||| ||||| |  ||||||||| || || |||| ||| ||||| |||       
T  10601240 tgcttatagcatttcattagtaatcaaagtttcaatataattgggtatatgaagataaatagtgggactagcgagaaatgtggcttcccctgcgagagtg 10601141  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||||| ||| | || |||||| ||| |||||||||||||  | ||||||||||    
T  10601140 tgagccaccacattagcttgtcgccgaacaaactccacctgagagttggtaaa 10601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 1186682 - 1186545
Alignment:
Q  169 catttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacc 268  Q
    ||||||||||||||||| || |||||||||||||  ||| | ||||||||| |   || ||||||   |||||   |||   |||||| |||||||||||    
T  1186682 catttcattaataataaaagtttcaatataattgaatatattaaaataaacgattcgattagctaaagacgtgatctctttagcaagagcatgagcaacc 1186583  T
Q  269 tcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
     |||| |||||| |||||||||||||||||||| ||||    
T  1186582 acgttggcttgtcgcctaacaaactccaccctagagtt 1186545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 4518468 - 4518359
Alignment:
Q  192 caatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaa 291  Q
    ||||| |||||| ||| | | |||| ||| ||||||||||||   ||||||  |||| ||||||| ||||||| ||| |||| |||||| ||||||||||    
T  4518468 caatacaattggatatatcataatagacagcgggactagctaaagacgtggtctctcgtgcaagagcatgagccaccgcgttagcttgtcgcctaacaaa 4518369  T
Q  292 ctccacccta 301  Q
    ||||||||||    
T  4518368 ctccacccta 4518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 19299024 - 19299172
Alignment:
Q  169 catttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacc 268  Q
    ||||||||||||||||| |  ||||||| |||||||||| | |||||||||  ||||||||||||   |||||   |||| || |||| ||||| ||||     
T  19299024 catttcattaataataaaaatttcaatacaattgggtatatcaaaataaacggcgggactagctaaagacgtgacctctcttgtaagagcatgaacaact 19299123  T
Q  269 tcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaag 317  Q
     |||| |||| | || ||||||||| ||||||| |||| | ||||||||    
T  19299124 acgttggcttatcgcttaacaaacttcaccctagagttagaaaagaaag 19299172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 42080595 - 42080471
Alignment:
Q  175 attaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgttt 274  Q
    ||||||||| | || | |||||||||| ||| | |||||||||||||||||| | ||||  || ||||  ||||||||||||  |||||||| | | |||    
T  42080595 attaataatcaaagttccaatataatttggtgtatgaaaataaacaacgggattggctacaaatgtggtctctcctgcaagagtatgagcaatcacattt 42080496  T
Q  275 gcttgttgcctaacaaactccaccc 299  Q
    ||||||  |||| ||||||||||||    
T  42080495 gcttgtctcctagcaaactccaccc 42080471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 23558798 - 23558678
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||||||||||||||| ||| | ||  |||||| | | ||||||||||||||||| |  |||||||||||| || ||    ||||||||||||  |    
T  23558798 tgcttataacatttcattaacaatcaaagtctcaatacattggggtatgtgaaaataaatagtgggactagctagaaatgttatctctcctgcaagagta 23558699  T
Q  260 tgagcaacctcgtttgcttgt 280  Q
    ||| ||||| | |||||||||    
T  23558698 tgaacaaccacatttgcttgt 23558678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 7670232 - 7670273
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataat 200  Q
    |||| |||| |||||||||||||||||||| |||||||||||    
T  7670232 atgcgtatatcatttcattaataataatagattcaatataat 7670273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 13700129 - 13700166
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  13700129 atgcttatagcatttcattaataataatagtttcaata 13700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 22898008 - 22897971
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  22898008 atgcttatagcatttcattaataataatagtttcaata 22897971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 19382633 - 19382665
Alignment:
Q  155 aaatatgcttataacatttcattaataataata 187  Q
    ||||||||||||| |||||||||||||||||||    
T  19382633 aaatatgcttatagcatttcattaataataata 19382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 4e-91; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 155 - 396
Target Start/End: Original strand, 23508839 - 23509080
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||  ||||||||||||||||| |||||||||| |||  ||||||||||| |||||||||||||||||| |||| |||| |||||||||||    
T  23508839 aaatatgcttattgcatttcattaataataagaggttcaatacaatcaggtatgtgaaattaaacaacgggactagctcgtaatgtggcttctcctgcaa 23508938  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |     
T  23508939 gaacatgagcaaccccatttgcttgtcgcctaacaaactccaccctagaattggtaaagaaagaactaaatagagaccgacatgatgagataatgcacct 23509038  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23509039 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 23509080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 394
Target Start/End: Complemental strand, 16416741 - 16416513
Alignment:
Q  166 taacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagca 265  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||| || | ||||||||||||| |||   ||||||||||||| | |||||    
T  16416741 taacatttcattaataataagaggttcaatacaattgggtatatgaaaataaataatgagactagctagtaatgtgacatctcctgcaagaatacgagca 16416642  T
Q  266 acctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattcagaag 365  Q
    ||||| ||| ||||| |||||||||||| ||||||| ||||||||||||||||| | || ||||||| |||||||||||||||| ||| ||||||| | |    
T  16416641 acctcatttacttgtcgcctaacaaactacaccctagagttggtaaagaaagaattgaatagagaccaacatgatgagataatgtatcgaaattcaaatg 16416542  T
Q  366 tgtcatctcgattagcatggaaggcatca 394  Q
    |||| ||||||||| |||| ||| |||||    
T  16416541 tgtcgtctcgattaacatgcaagacatca 16416513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 159 - 360
Target Start/End: Original strand, 34355737 - 34355938
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||| ||||||||||||||||| ||| ||||| ||||||| |    
T  34355737 atgcttatagcatttcattgataataagagtttcaatacaattgggtatatcaaaataaacagcgggactagctagtaacatggtttctcttgcaagagc 34355836  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    ||||||||||||||| |||| | || ||||||||| ||||||| ||||   ||| |||||| |||||| ||| ||||| || || |||||||| ||||||    
T  34355837 atgagcaacctcgttggcttttcgcataacaaacttcaccctagagttaaaaaataaagaagtaaacaaagaacgacaagaagaaataatgcaaccaaat 34355936  T
Q  359 tc 360  Q
    ||    
T  34355937 tc 34355938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 1493235 - 1493382
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||| |  ||||||||  ||||||||||||   ||||||  |||| ||||||| |    
T  1493235 atgcttatagcatttcattgataataatagtttcaatataattgggtatatcgaaataaacggcgggactagctaaagacgtggcctctcttgcaagagc 1493334  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||||||||| |||| |||||| |||||||||||||||||||| ||||    
T  1493335 atgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagtt 1493382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 9959378 - 9959227
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||| |||||||| |||||||||||| |||||||  |||||| |||||||||| | | |||||||  ||||||||||||   ||||| |||||| |||||    
T  9959378 aaatgtgcttatagcatttcattaatcataatagtctcaatacaattgggtatatcataataaacggcgggactagctaaagacgtgagttctcgtgcaa 9959279  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    || ||||||||||| |||| |||||| |||||||||||||||||||| ||||    
T  9959278 gagcatgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagtt 9959227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 187172 - 187079
Alignment:
Q  169 catttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||||||||||||||| || ||||||| |||||| ||||| |||||||| |||  |||||||||| || |||| |||||||||||||||||||    
T  187172 catttcattaataataagagattcaatacaattggatatgttaaaataaataacaagactagctagaaatgtggcttctcctgcaagaacatga 187079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 31029275 - 31029126
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||||||  |||||| |||||||||| | | |||| ||| ||||||||||||   ||||||  |||| |||||||      
T  31029275 atgcttatagcatttcattgatcataatagtctcaatacaattgggtatatcataatagacagcgggactagctaaggacgtggcctctcgtgcaagagt 31029176  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    |||||| |||  ||| |||||| |||||||||||||||||||| ||||||    
T  31029175 atgagccaccgtgttagcttgtcgcctaacaaactccaccctagagttgg 31029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 160 - 312
Target Start/End: Original strand, 30140932 - 30141084
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||||||||| | || ||||||| |||||||||| |||||||| | | |||||||||| || || |||| |||   |||||||       
T  30140932 tgcttatagcatttcattaataatcaaagtttcaatacaattgggtatatgaaaatagatagcgggactagcgagaaatgtggcttcctttgcaagagtg 30141031  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||| | ||| | || |||||| |||||||||||||||||||| ||||||||||    
T  30141032 tgatccaccacattagcttgtcgcctaacaaactccaccctagagttggtaaa 30141084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 13768304 - 13768183
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||| ||||||||||| || ||||||| ||| |||||| | ||||||||||||   |||| |||||||||||  ||||| |||||    
T  13768304 aaatatgcttatagcatttgattaataataagagattcaatacaatcgggtatataaaaataaacaacaaaactaactagtaacgtgacttctcttgcaa 13768205  T
Q  255 gaacatgagcaacctcgtttgc 276  Q
    ||| |||  ||||| |||||||    
T  13768204 gaatatggacaaccccgtttgc 13768183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 13825534 - 13825454
Alignment:
Q  244 ttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaa 324  Q
    ||||| |||||| |||||||||||| |||| |||||| |||||||||||||||| |||||||| | |||||||||| ||||    
T  13825534 ttctcttgcaagtacatgagcaaccgcgttggcttgtcgcctaacaaactccacactaaagttagaaaagaaagaagtaaa 13825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 10910623 - 10910512
Alignment:
Q  213 aataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| | |||||||| |||  ||||||| ||||| ||||||| |||||||||||  ||| | ||||  |||||||||||||||||||||||| | |||    
T  10910623 aataaatagcgggactaactaagaacgtggtttctcttgcaagagcatgagcaaccgtgttagtttgtcacctaacaaactccaccctaaagttagaaaa 10910524  T
Q  313 gaaagaactaaa 324  Q
    ||||| ||||||    
T  10910523 gaaaggactaaa 10910512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 16890357 - 16890210
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||  |||||||||||||| || || ||||| | |||||||||| | |||||||||  ||| ||||| ||   | |||| ||||| ||||||| |    
T  16890357 atgcttattgcatttcattaataacaagagtttcaaaacaattgggtatatcaaaataaacggcggtactagttaaagatgtggcttctcttgcaagagc 16890258  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||||||||| ||||   |||| |||||||||||||||||||| ||||    
T  16890257 atgagcaaccgcgttgctttgtcgcctaacaaactccaccctagagtt 16890210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 369
Target Start/End: Complemental strand, 30589068 - 30588912
Alignment:
Q  213 aataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| ||||| ||||||||  ||||||| ||||| ||||||| |||||||||||  ||| || ||| |    ||||||||||||||| |||| | |||    
T  30589068 aataaataacggaactagctaagaacgtggcttctcttgcaagagcatgagcaaccgtgttggcatgtcgtaggacaaactccaccctagagttagaaaa 30588969  T
Q  313 gaaagaactaaacagagaccgacatgatgagataatgcatccaaattcagaagtgtc 369  Q
    |||||||||||| ||  | ||||| |||||||||||  | |||||||| || |||||    
T  30588968 gaaagaactaaaaagtaaacgacaagatgagataatagagccaaattcggatgtgtc 30588912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 35087841 - 35087882
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataatt 201  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  35087841 tgcttataacatttcattaataataatcgtttcaatacaatt 35087882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 6695725 - 6695689
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  6695725 tgcttataacatttcattaatgataatagtttcaata 6695689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 6e-84; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 13686159 - 13685918
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| || ||||||| ||| |||||| ||||||||||||| |||||||||||||||||||  ||||| |||||    
T  13686159 aaatatgcttatagcatttcattaataataagagattcaatacaatcgggtatatgaaaataaacaatgggactagctagtaacgtgacttctcttgcaa 13686060  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||| ||    
T  13686059 gaacatgagcaaccccgtttgcttgtcgcctaacaaactccaccctagagttggtaaacaaagaactgaacaaagaccgacatgatgagataatgcaccc 13685960  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    |||||||||||||||  || ||||||||||||| ||||||||    
T  13685959 aaattcagaagtgtcgccttgattagcatggaatgcatcaca 13685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 155 - 364
Target Start/End: Original strand, 37061038 - 37061247
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||||||||||||||||||| |||||||||| || ||||||| ||| |||||||| |||||||||||||||||||||||| ||| ||| ||||| |||||    
T  37061038 aaatatgcttataacatttcgttaataataagagattcaatacaatcgggtatgttaaaataaacaacgggactagctagaaacatggcttctcttgcaa 37061137  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    | |||||||||||| | |||| ||||  |||| |||||||||||||| ||||||||||  |||| || || |||||  |||| || || |||||||| ||    
T  37061138 gcacatgagcaaccacatttgtttgtcacctagcaaactccaccctagagttggtaaaagaagagctgaaaagagattgacaagaagaaataatgcaccc 37061237  T
Q  355 aaattcagaa 364  Q
    ||||||||||    
T  37061238 aaattcagaa 37061247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 360
Target Start/End: Original strand, 30190940 - 30191141
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||||||||||||||||||||| || ||||||| |||||| ||| | |||||||||  ||||||||||||   ||||||  |||| || |||| |    
T  30190940 atgcttataacatttcattaataataagagtttcaatacaattggatatatcaaaataaacggcgggactagctaaagacgtggtctctcttgtaagagc 30191039  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| | |||| ||| ||| |||| ||| ||||| ||  | |||||||| ||||||    
T  30191040 atgagcaaccacgttggcttgttgcctaacaaactccaccctaaagttagaaaaggaagtactgaacaaagaacgacaggagaaaataatgcagccaaat 30191139  T
Q  359 tc 360  Q
    ||    
T  30191140 tc 30191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 30859510 - 30859309
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||| ||   ||||||  || | ||||||| |    
T  30859510 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagttaaagacgtggcctcccttgcaagagc 30859411  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| |||||||| || |||||||||||||||    
T  30859410 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacatgaggaaataatgcatccaaat 30859311  T
Q  359 tc 360  Q
    ||    
T  30859310 tc 30859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 16431348 - 16431525
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||||||||||||||||||||| |  ||||||| || || |||| | |||||||||| ||||| || |||||||||||| ||||| ||||||| |    
T  16431348 atgcttataacatttcattaataataagaatttcaatacaactgagtatttcaaaataaacagcgggagtaactagtaacgtggcttctcttgcaagagc 16431447  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgaca 336  Q
    |||| |||||||||| | |||| |||||||||||||||||||| |||| | ||| ||| || |||||| ||| |||||    
T  16431448 atgaacaacctcgttggtttgtcgcctaacaaactccaccctagagttagaaaataaaaaagtaaacaaagaacgaca 16431525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 55227759 - 55227558
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   | ||||  || | ||||||| |    
T  55227759 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagatgtggcctcccttgcaagagc 55227660  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| | |||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  55227659 atgagcaaccacgttggtttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 55227560  T
Q  359 tc 360  Q
    ||    
T  55227559 tc 55227558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 16582335 - 16582541
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||| ||| |||||||||||||||| ||||||| || ||||||| | |||||||||   |||||||||||||||||||  ||||| ||||||| |||||    
T  16582335 ttatagcatatcattaataataatagtttcaatacaactgggtatttcaaaataaacggtgggactagctagtaacgtgacttctcttgcaagagcatga 16582434  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattcag 362  Q
    ||| ||||||| |||||| |||  |||||||||||||||||||||| ||| |||  | |||||| | | ||||| || || ||||| || |||||||| |    
T  16582435 gcagcctcgttggcttgtcgcccgacaaactccaccctaaagttggaaaataaaacagtaaacaaataacgacaagaagaaataatacagccaaattcgg 16582534  T
Q  363 aagtgtc 369  Q
    | |||||    
T  16582535 atgtgtc 16582541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 54027691 - 54027848
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||| |||||||| ||||||||||||||| | || |||||||||||||||||| |||||||||| | ||||| |||| || || |||| ||| ||| |||    
T  54027691 aaatgtgcttatatcatttcattaataatcaaagtttcaatataattgggtatatgaaaataaatagcgggagtagcgagaaatgtggcttcccctacaa 54027790  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||   ||||| ||| | || |||||| |||||| ||||||||||||| ||||||||||    
T  54027791 gagtgtgagccaccacattagcttgtcgcctaaaaaactccaccctagagttggtaaa 54027848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 363
Target Start/End: Complemental strand, 18878320 - 18878117
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| |||||||||||||||||||| ||||||| || ||||||| | | ||||||| ||| || ||||||  |||||||  |||| ||||| | ||    
T  18878320 tgcttatagcatttcattaataataatagtttcaatacaagtgggtatatcataataaacgacgagattagctaaaaacgtggcctctcgtgcaaaagca 18878221  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    ||||||||  | ||  ||||| |||||||||||||||||||| |||| | ||| |||   | ||||| ||| |||||||| || |||||||| | |||||    
T  18878220 tgagcaactgcattgacttgtcgcctaacaaactccaccctagagttagaaaataaattgcaaaacaaagaacgacatgaggaaataatgcaacaaaatt 18878121  T
Q  360 caga 363  Q
    ||||    
T  18878120 caga 18878117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 162 - 306
Target Start/End: Original strand, 20527775 - 20527919
Alignment:
Q  162 cttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatg 261  Q
    |||||| ||||||||| ||||||| || ||||||| ||| |||||| | | ||||||   |||||||||| ||||||  ||  |||| ||||||| ||||    
T  20527775 cttatagcatttcattgataataagagtttcaatacaatcgggtatatcataataaatggcgggactagcgagtaacaaggcctctcttgcaagagcatg 20527874  T
Q  262 agcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    ||||||| |||| |||||  |||||||||||||||||||| ||||    
T  20527875 agcaaccccgttagcttgccgcctaacaaactccaccctagagtt 20527919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 4235464 - 4235313
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| |||||||||||| |||||||  |||||| |||||| ||| | | |||||||  | | ||||||||   ||||||  |||| |||||    
T  4235464 aaatatgcttatagcatttcattaatcataatagtctcaatacaattggatatatcataataaacggcagaactagctaaagacgtggcctctcgtgcaa 4235365  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    || ||||||| | | |||| |||||| |||||||||||||||||||| ||||    
T  4235364 gagcatgagccatcgcgttggcttgtggcctaacaaactccaccctagagtt 4235313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 27087436 - 27087593
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||| |||||||| ||||||||||||||| | || ||||||| ||||| |||| |||||||| | | |||||||||| || || |||| |||   |||||    
T  27087436 aaatgtgcttatagcatttcattaataatcaaagtttcaatacaattgagtatatgaaaatagatagcgggactagcgagaaatgtggcttcctttgcaa 27087535  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||   ||| | ||| | || |||||| |||||||||||||||||||| ||||||||||    
T  27087536 gagtgtgacccaccacattagcttgtcgcctaacaaactccaccctagagttggtaaa 27087593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 27066335 - 27066492
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||| |||||||| ||||||||||||||| | || ||||||| ||||| |||| |||||||| | | |||||||||| || || |||| |||   |||||    
T  27066335 aaatgtgcttatagcatttcattaataatcaaagtttcaatacaattgagtatatgaaaatagatagcgggactagcgagaaatgtggcttcctttgcaa 27066434  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||   ||| | ||| | || |||||| ||| |||||||||||||||| ||||||||||    
T  27066435 gagtgtgacccaccacattagcttgtcgcccaacaaactccaccctagagttggtaaa 27066492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 312
Target Start/End: Complemental strand, 12355370 - 12355218
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||| | ||||||||||||||| | || ||||||| |||||||||| |||||||| | |  ||||||||| || || |||| |||   || ||||       
T  12355370 tgcttaaagcatttcattaataatcaaagtttcaatacaattgggtatatgaaaatagatagtgggactagcgagaaatgtggtttcctttggaagagtg 12355271  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||||| ||| | ||  ||||| |||||||||||||||||||| ||||||||||    
T  12355270 tgagccaccacattaccttgtcgcctaacaaactccaccctagagttggtaaa 12355218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 308
Target Start/End: Complemental strand, 34301955 - 34301807
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| |||||||||||| || | || ||||||| ||||||||||   | |||||  |||||||||||||| ||| ||||  |||  |||||||  |    
T  34301955 tgcttatagcatttcattaatgattaaagattcaatacaattgggtatagcataataagtaacgggactagctattaatgtggcctcttttgcaagatta 34301856  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    ||||| ||| | |||| |||| ||||||| |||||||||| | ||||||    
T  34301855 tgagctaccgcatttgtttgtcgcctaacgaactccacccgagagttgg 34301807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 54823806 - 54823658
Alignment:
Q  169 catttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacc 268  Q
    ||||||||||||||||| |  ||||||| |||||||||| | |||||||||  ||||||||||||   |||||   |||| || |||| ||||| ||||     
T  54823806 catttcattaataataaaaatttcaatacaattgggtatatcaaaataaacggcgggactagctaaagacgtgacctctcttgtaagagcatgaacaact 54823707  T
Q  269 tcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaag 317  Q
     |||| |||| | || ||||||||| ||||||| |||| | ||||||||    
T  54823706 acgttggcttatcgcttaacaaacttcaccctagagttagaaaagaaag 54823658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 4462723 - 4462486
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| | |  | ||| ||||||||||    |||||||| |||||| |||| ||||||||| |    
T  4462723 aaatatgtttataacattttattaataataaaagtttcaatacattcagatatatgaaaataaattgtgggactagttagtaatgtggcttctcctgcga 4462624  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
     |||||||||||||   ||   |||| ||| || |||||||||   | |||||||||| ||||| ||||  ||||  ||||||||  | ||||| || ||    
T  4462623 -aacatgagcaacc---ttaatttgtcgccgaataaactccacttcagagttggtaaaaaaagagctaactagagtgcgacatgaataaataatacaccc 4462528  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||| ||||||   | ||||||| ||||||| |||||||||||    
T  4462527 aaactcagaataataatctcgagtagcatgaaaggcatcaca 4462486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 14264087 - 14263982
Alignment:
Q  258 catgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaa 357  Q
    ||||||||||| |||| |||||| ||||||||||||| |||||  |||||| ||| ||   || ||||| ||| |||||||| || |||||||| |||||    
T  14264087 catgagcaaccgcgttggcttgtcgcctaacaaactctaccctggagttggaaaaaaagttacgaaacaaagaacgacatgaagaaataatgcacccaaa 14263988  T
Q  358 ttcaga 363  Q
     |||||    
T  14263987 ctcaga 14263982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 330
Target Start/End: Complemental strand, 26949363 - 26949203
Alignment:
Q  169 catttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacc 268  Q
    ||||||||| |||||||||||||||||| ||   || |   ||||||||  ||| ||||||||||| || || |  |||||||||||  |||||||  ||    
T  26949363 catttcatttataataataggttcaatacaagaagggaac-gaaaataagtaacaggactagctagaaatgttgcctctcctgcaagcgcatgagcggcc 26949265  T
Q  269 tcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagaga 330  Q
     | ||||||||| || ||  ||||||||||||| |||| |||||||||| | |||| |||||    
T  26949264 acatttgcttgtcgcttagaaaactccaccctagagtttgtaaagaaagcagtaaatagaga 26949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 27066649 - 27066686
Alignment:
Q  275 gcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  27066649 gcttgtcgcctaacaaactccaccctagagttggtaaa 27066686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 27066843 - 27066880
Alignment:
Q  275 gcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  27066843 gcttgtcgcctaacaaactccaccctagagttggtaaa 27066880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 11790897 - 11790857
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataa 199  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  11790897 atgcttattacatttcattaataataatctgttcaatataa 11790857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 155 - 396
Target Start/End: Original strand, 33611022 - 33611263
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||| |||||||||| |||  ||||||||||    
T  33611022 aaatatgcttatagcattttattaataataagaggttcaatacaatcgggtatatgaaaataaacaacgggaccagctagtaacatggcatctcctgcaa 33611121  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||| |||||  |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |     
T  33611122 gaacatgaacaaccctgtttgcttgtcgcctaacaaactccaccctagagttggtaaagaaagaactgaacagagaccgacatgatgaggtaatgcacca 33611221  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||    
T  33611222 aaattcataagtgtcgtctcgattagcatggaatgcatcaca 33611263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 369
Target Start/End: Original strand, 48100729 - 48100943
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| |  ||||||| |||  | |||   ||||||||||||||||||| |||| ||||||| |||||||||||    
T  48100729 aaatatgcttatagcatttcattaataataagatattcaatacaatcagatatactaaaataaacaacgggactaactagaaacgtggattctcctgcaa 48100828  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    | |||||||||||| | ||||||||| ||||| |||||||||||||| |||||||||| ||||| || || ||||| ||||| || || |||| ||||||    
T  48100829 gcacatgagcaaccacatttgcttgtcgcctagcaaactccaccctagagttggtaaaaaaagagctgaatagagatcgacaagaagaaataacgcatcc 48100928  T
Q  355 aaattcagaagtgtc 369  Q
    |||||||||| ||||    
T  48100929 aaattcagaaatgtc 48100943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 13014956 - 13015114
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| ||||||| |||||||||| | |||||||||||| ||||||||||||||||||| ||||| ||||||| |    
T  13014956 atgcttatagcatttcattgataataatagtttcaatacaattgggtatctcaaaataaacaacaggactagctagtaacgtggattctcttgcaagagc 13015055  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaag 317  Q
    ||||||||||||||| |||||| |||||||||||| ||||| | |||||| ||| ||||    
T  13015056 atgagcaacctcgttggcttgtcgcctaacaaactacacccgagagttggaaaataaag 13015114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 159 - 369
Target Start/End: Complemental strand, 15633376 - 15633166
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||||||||||| ||||| |||||||      
T  15633376 atgcttatagcatttcattgataataatagtttcaatacaattgggtatttcaaagtaaacaacgggactagctagtaacgtggcttctcttgcaagagt 15633277  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||||| || |||||| |||||||||||||||||| | |||||| ||| |||| | | ||||  || ||||| || || |||||||| ||||||    
T  15633276 atgagcaacctcattggcttgtcgcctaacaaactccacccgagagttggaaaataaagcagtgaacaacgaacgacaagaagaaataatgcagccaaat 15633177  T
Q  359 tcagaagtgtc 369  Q
    || || |||||    
T  15633176 tcggacgtgtc 15633166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 155 - 382
Target Start/End: Complemental strand, 48770263 - 48770036
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| || ||||||| | | |||||| ||||||||||    |||||||||| |||| |||| ||||||||| |    
T  48770263 aaatatgcttatagcatttcattaataataagagtttcaatacattcgggtatatgaaaataaatggtgggactagcttgtaatgtggcttctcctgcga 48770164  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||||| || |||| | ||| || ||||||||||||| |||||||||| ||||| ||||  ||||  |||||||| || ||||| |||||    
T  48770163 gaacatgagcaacctcattagcttctcgccgaataaactccaccctagagttggtaaaaaaagagctaactagagtgcgacatgaagaaataatacatcc 48770064  T
Q  355 aaattcagaagtgtcatctcgattagca 382  Q
    ||| ||||||  ||| |||||| |||||    
T  48770063 aaactcagaatagtcgtctcgagtagca 48770036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 359
Target Start/End: Complemental strand, 32480362 - 32480162
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || ||||||| ||||| |||| | |||||||||  ||||||||||||   ||||||  || | |||||||      
T  32480362 atgcttatagcatttcattaataataagagtttcaatacaattgagtatattaaaataaactgcgggactagctaaagacgtggcctcccttgcaagagt 32480263  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  32480262 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 32480163  T
Q  359 t 359  Q
    |    
T  32480162 t 32480162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 3896612 - 3896475
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || ||||||| ||| |||||| | |||||||||  ||||||||||||   ||||||  |||| ||||||  |    
T  3896612 atgcttatagcatttcattaataataagagtttcaatacaatcgggtatatcaaaataaacggcgggactagctaaagacgtggcctctcttgcaagtgc 3896513  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactcca 296  Q
    |||||||||| |||| |||||| |||||||||||||||    
T  3896512 atgagcaaccacgttggcttgtcgcctaacaaactcca 3896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 47081645 - 47081794
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||||||  |||||| |||||||||| | | |||| ||| ||||||||||||   ||||||  |||| ||||||| |    
T  47081645 atgcttatagcatttcattgatcataatagtctcaatacaattgggtatatcataatagacagcgggactagctaaagacgtggcctctcgtgcaagagc 47081744  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    |||||| ||| |||| |||||| |||||||||||||||||||| ||||||    
T  47081745 atgagccaccgcgttagcttgtcgcctaacaaactccaccctagagttgg 47081794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 8118792 - 8118940
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||||||  |||||| |||||||||| | | |||| ||| ||||||||||||   ||||||  |||| ||||||| |    
T  8118792 atgcttatagcatttcattgatcataatagtctcaatacaattgggtatatcataatagacagcgggactagctaaagacgtggcctctcgtgcaagagc 8118891  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttg 307  Q
    |||||| ||| |||| |||||| |||||||||||||||||||| |||||    
T  8118892 atgagccaccgcgttagcttgtcgcctaacaaactccaccctagagttg 8118940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 371
Target Start/End: Complemental strand, 11343243 - 11343028
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||| ||||||||| |||||||  | ||||||||| | |||||| |||||||||||| |||||||||| || ||||||| | ||| |||||    
T  11343243 aaatatgtttatagcatttcattgataataagtgtttcaatatattagggtatatgaaaataaacagcgggactagcgagcaacgtggctactcttgcaa 11343144  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |  ||||||||||  |||||  |||| ||||||||||||||| | || |||||| |||   ||||||||| | ||| | ||| || || |||||||| ||    
T  11343143 gggcatgagcaactccgtttatttgtcgcctaacaaactccatcatagagttggaaaaagtagaactaaataaagaacaacaagaaga-ataatgcaacc 11343045  T
Q  355 aaattcagaagtgtcat 371  Q
    |||||| || |||||||    
T  11343044 aaattcggacgtgtcat 11343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 24226203 - 24226342
Alignment:
Q  162 cttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatg 261  Q
    |||||| ||||||||||||||||| || || |||| || ||||||| | | |||||||  ||||||||||||   ||||||  |||| ||||||| ||||    
T  24226203 cttatagcatttcattaataataagagtttaaatacaagtgggtatatcataataaacgtcgggactagctaaagacgtggcctctcgtgcaagagcatg 24226302  T
Q  262 agcaacctcgtttgcttgttgcctaacaaactccacccta 301  Q
    ||||||| |||| |||||| ||||||||||||||||||||    
T  24226303 agcaaccgcgttggcttgtcgcctaacaaactccacccta 24226342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 30502653 - 30502496
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||||||||||||||||||||| || ||||||| ||| |||||| | |||||||||  ||||||||||||   ||||||  |||| |||||||      
T  30502653 atgcttataacatttcattaataataagagtttcaatacaatcgggtatatcaaaataaactgcgggactagctaaggacgtggcctctcttgcaagagt 30502554  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaa 316  Q
    |||||||||| ||||  ||||| |  |||||||||||||| || |||| | |||||||    
T  30502553 atgagcaaccgcgttgacttgtcgagtaacaaactccaccttagagttagaaaagaaa 30502496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 324
Target Start/End: Original strand, 17238666 - 17238831
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||| |  | ||||||| | | |||||| | | |||||| |  |||||||| ||  || |||| ||||| ||||||  |    
T  17238666 atgcttatagcatttcattgataattaaggattcaatacattcgggtatatcataataaatagtgggactagttaagaatgtggcttctcttgcaagtgc 17238765  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaa 324  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||||||||||    
T  17238766 atgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagaactaaa 17238831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 363
Target Start/End: Complemental strand, 41601579 - 41601376
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||| | || ||||||| ||||||| |||||||||| | | |||||||| ||||||||||||   | ||||  |||| ||||||| ||    
T  41601579 tgcttatagcatttcactcatcataatagtttcaatacaattgggtatatcataataaacagcgggactagctaaagatgtggcctctcgtgcaagagca 41601480  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    ||| ||||| | || |||||  |||||||||||||||||||| |||| | ||| |||  || ||||| ||| ||||| || || |||||  | |||||||    
T  41601479 tgaacaaccgctttggcttgccgcctaacaaactccaccctagagttagaaaataaattacgaaacaaagaacgacaggaagaaataatagaaccaaatt 41601380  T
Q  360 caga 363  Q
    ||||    
T  41601379 caga 41601376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 27458285 - 27458083
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||| | || ||||||||||||||| | ||||||| |||||||||||| | ||||||| ||||  |||||||   ||||||  ||||  |||||| |    
T  27458285 atgcttaaagcaattcattaataataatggattcaatacaattgggtatgtcataataaactacggagctagctaaggacgtggcatctctagcaagagc 27458186  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
     | |||||||||||| ||||||  ||||| ||||||||||||| |||| | ||| | |||| |||| || || ||||| ||||| |||||  | ||||||    
T  27458185 gttagcaacctcgttggcttgtctcctaataaactccaccctagagttagaaaaaacagaattaaatagcgaacgacaagatgaaataatagaaccaaat 27458086  T
Q  359 tca 361  Q
    |||    
T  27458085 tca 27458083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 3205177 - 3205281
Alignment:
Q  212 aaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaa 311  Q
    ||||||||  ||||||||||||   |||||| ||||| ||||||| ||||||||||| |||| | |||| ||||||||||||||||| ||||||| | ||    
T  3205177 aaataaacggcgggactagctaaagacgtggcttctcttgcaagagcatgagcaaccacgttgggttgtcgcctaacaaactccaccataaagttagaaa 3205276  T
Q  312 agaaa 316  Q
    |||||    
T  3205277 agaaa 3205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 27810687 - 27810574
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||||||||||||  |||||||| |||||||||| ||||||| || ||||||| | |||||||||| || ||||||| || || ||||  || |||||||    
T  27810687 aaatatgcttatagaatttcatttataataatagtttcaatacaactgggtatattaaaataaacagcgagactagcaaggaatgtggcctcccctgcaa 27810588  T
Q  255 gaacatgagcaacc 268  Q
    |  |||||||||||    
T  27810587 gtgcatgagcaacc 27810574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 26016679 - 26016618
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaata 216  Q
    ||||||||||||| ||||||||||||||||| |  ||||||| |||||||||| | ||||||    
T  26016679 aaatatgcttatagcatttcattaataataagatattcaatacaattgggtatatcaaaata 26016618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 3960065 - 3960198
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    |||||||||||||||||| || | || ||||||| ||||| ||||   | |||||  ||||| | |||||| ||| ||||  |||| |||||||  ||||    
T  3960065 ttataacatttcattaattattaaagattcaatacaattgagtataacataataagtaacggaattagctaataatgtggtctctcttgcaagattatga 3960164  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactcca 296  Q
    || ||| | ||||||||| ||||||| |||||||    
T  3960165 gctaccacatttgcttgtagcctaacgaactcca 3960198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 29962007 - 29961970
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  29962007 atgcttatagcatttcattaataataatagattcaata 29961970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 42510026 - 42510067
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaata 196  Q
    |||| ||||||||||||||||||||| ||||||| |||||||    
T  42510026 aaatgtgcttataacatttcattaatgataatagtttcaata 42510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 19237811 - 19237576
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||||||||||||||||||||| |||||||      | || ||| ||||||||||||  || | ||||||||| ||||   |||| |||||    
T  19237811 aaatatgcttataacatttcattaataataagaggttca------tcggatatatgaaaataaacagtggaattagctagtagcgtgacctctcttgcaa 19237718  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||  || ||||| |||||||||||||||||||| ||    
T  19237717 gaacatgagcaacctcatttgcttgtcgcctaataaactccaccctagagttggtaaagaaagaaccgaagagagatcgacatgatgagataatgcaccc 19237618  T
Q  355 aaattcagaagtgtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  19237617 aaattcaaaagtgtcatctcgatgagcatggaaggcatcaca 19237576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 371
Target Start/End: Original strand, 2157770 - 2157982
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||| |    
T  2157770 atgcttatagcatttcattgataataatagtttcaatacaattgggtatctcaaaataaacaacgggactagctagtaacgtggcttctcttgcaagagc 2157869  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    || ||||| |||||| |||||| |||||||||||||||||| | |||||| ||| |||| |   ||||  || ||||| || || |||||||| ||||||    
T  2157870 ataagcaatctcgttggcttgtcgcctaacaaactccacccgagagttggaaaataaaggagggaacaacgaacgacaagaagaaataatgcagccaaat 2157969  T
Q  359 tcagaagtgtcat 371  Q
    || || |||||||    
T  2157970 tcggatgtgtcat 2157982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 22292526 - 22292325
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   ||||||  || | ||||||| |    
T  22292526 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagacgtggcctcccttgcaagagc 22292427  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  22292426 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 22292327  T
Q  359 tc 360  Q
    ||    
T  22292326 tc 22292325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 371
Target Start/End: Original strand, 19741524 - 19741735
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||||||||||||| ||||||| || ||||||| || |  |||| | |  ||||||| |||||||||||||||| |||| ||||| ||||||| ||    
T  19741524 tgcttataacatttcattgataataagagtttcaatacaaatatgtatttcatgataaacagcgggactagctagtaatgtggcttctcttgcaagagca 19741623  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaatt 359  Q
    ||||||||| |||| |||||| |||||||||| | ||||||| |||||| ||| |||||| |||||| ||| ||||| || || |||||||| |||||||    
T  19741624 tgagcaaccccgttagcttgtcgcctaacaaatttcaccctagagttggaaaataaagaagtaaacaaagaacgacaagaagaaataatgcagccaaatt 19741723  T
Q  360 cagaagtgtcat 371  Q
    | || |||||||    
T  19741724 cggacgtgtcat 19741735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 155 - 396
Target Start/End: Complemental strand, 36045068 - 36044827
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| || ||||||| | | ||| || ||||||||||    ||||||||||||||| |||| ||||||| |||    
T  36045068 aaatatgcttatagcatttcattaataataagagattcaatacattcgggcatatgaaaataaatggtgggactagctagtaatgtggcttctcctacaa 36044969  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    ||| |||||||||||| || |||||| |||||||||||| ||| ||| |||||||||| ||| ||||||  ||||  ||||| || || |||||||| |     
T  36044968 gaatatgagcaacctcattggcttgtcgcctaacaaacttcactctagagttggtaaaaaaataactaactagagtacgacaggaagaaataatgcacct 36044869  T
Q  355 aaattcagaagt-gtcatctcgattagcatggaaggcatcaca 396  Q
    ||||||| |||| ||| ||| || ||| |||||||||||||||    
T  36044868 aaattca-aagtagtcgtcttgagtagtatggaaggcatcaca 36044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 23622654 - 23622542
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| ||||||||||||||||| || ||||||| ||| |||||||| ||||||||||||| |||||||||| ||||||| |||||||||||    
T  23622654 aaatatgcttatagcatttcattaataataagagattcaatacaatcgggtatgttaaaataaacaacgagactagctagaaacgtggcttctcctgcaa 23622555  T
Q  255 gaacatgagcaac 267  Q
    | |||||||||||    
T  23622554 gcacatgagcaac 23622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 376
Target Start/End: Original strand, 29955453 - 29955671
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||||||||||||||||||||| || ||||||| |||  ||||||| ||||||||||| | |||||| ||| ||||||  ||||| | |||    
T  29955453 aaatatgattataacatttcattaataataaaagattcaatacaatcaggtatgttaaaataaacaatgagactagttagaaacgtgacttctcttacaa 29955552  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    | ||||||||||||   |||| |||| ||||| |||||||||   || ||||||||||  |||| || || ||||| ||||| || || ||||||||| |    
T  29955553 gcacatgagcaaccatatttgtttgtcgcctagcaaactcca---tagagttggtaaaagaagagctgaatagagatcgacaagaagaaataatgcatgc 29955649  T
Q  355 aaattcagaagtgtcatctcga 376  Q
    |||| ||||| |||| ||||||    
T  29955650 aaatccagaaatgtcgtctcga 29955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 312
Target Start/End: Original strand, 29754948 - 29755099
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||||||||| | || ||||||| |||||||||| |||||||| | | |||||||||| || || |||| ||||  |||||||       
T  29754948 tgcttatagcatttcattaataatcaaagtttcaatacaattgggtatatgaaaatagatagcgggactagcgagaaatgtggcttct-ttgcaagagtg 29755046  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||||| ||| | || |||||| |||||||||||||||||||| ||||||||||    
T  29755047 tgagccaccacattagcttgtcgcctaacaaactccaccctagagttggtaaa 29755099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 18759862 - 18759705
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||| | |||||||||  |||||||| |||   | ||||  |||| ||||||| |    
T  18759862 atgcttatagcatttcattaataataaaagtttcaatataattgggtatatcaaaataaacggcgggactaactaaagatgtggtctctcttgcaagagc 18759763  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaag 317  Q
    ||||| |||  |||| |||| |  ||||||||||||||||||| |||| | ||||||||    
T  18759762 atgag-aactgcgttggcttatcacctaacaaactccaccctagagttagaaaagaaag 18759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 371
Target Start/End: Original strand, 34919988 - 34920134
Alignment:
Q  225 gactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaa 324  Q
    ||||||||||||||||||  |||| ||||||  |||||||||   ||||||||||| |||| | |||||| |||||| |||| | ||| |||||  ||||    
T  34919988 gactagctagtaacgtggtgtctcttgcaagtgcatgagcaattccgtttgcttgtcgcctgaaaaactctaccctagagttagaaaataaagagttaaa 34920087  T
Q  325 cagagaccgacatgatgagataatgcatccaaattcagaagtgtcat 371  Q
    || ||| ||||| || |  |||||||| |||||||||||||||||||    
T  34920088 caaagaacgacaagaagtaataatgcaaccaaattcagaagtgtcat 34920134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 5335206 - 5335355
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||| ||||||||||||||| | || |||||||||||||| | | |||||||| | | || ||||||| || || |||| |||   |||||||   |||    
T  5335206 ttatatcatttcattaataatcaaagtttcaatataattggatttatgaaaatagatagcgagactagcgagaaatgtggcttcctttgcaagagtgtga 5335305  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    || | | | || ||||||||||||||||||||||||||| ||||||||||    
T  5335306 gccaacacattagcttgttgcctaacaaactccaccctagagttggtaaa 5335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 360
Target Start/End: Complemental strand, 28246405 - 28246203
Alignment:
Q  162 cttataacatttcattaataataatag----gttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaa 257  Q
    |||||||||||||||||||||||| ||     ||||||| |||||||||| | |||||||||  ||||||||| ||   |||||   |||| |||||||     
T  28246405 cttataacatttcattaataataagagtttcattcaatacaattgggtatataaaaataaacggcgggactagttaaagacgtgacctctcttgcaagag 28246306  T
Q  258 catgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaa 357  Q
    ||||| ||||| ||||  ||||| | ||||||||||||| |||| |||| | |||||||| | | |||| ||| | ||| || || |||||||| |||||    
T  28246305 catgaacaaccacgttgacttgtcgtctaacaaactccatcctagagttagaaaagaaagtattgaacaaagaacaacaggaggaaataatgcagccaaa 28246206  T
Q  358 ttc 360  Q
    |||    
T  28246205 ttc 28246203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 40300005 - 40299909
Alignment:
Q  203 ggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccc 299  Q
    ||||| |||||||||||||||| |||||| || || ||||  ||| || | |||  |||||||||| ||||||||||| ||||||||||||||||||    
T  40300005 ggtatatgaaaataaacaacggaactagcgagaaatgtggcctcttctacgagagtatgagcaaccacgtttgcttgtcgcctaacaaactccaccc 40299909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 23622538 - 23622432
Alignment:
Q  288 caaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattcagaagtgtcatctcgattagcatggaa 387  Q
    |||||||||||||| ||||||||||  |||| || || ||||| ||||| || || |||||||| |||||||||||| |||| |||||| ||| ||| ||    
T  23622538 caaactccaccctagagttggtaaaagaagagctgaaaagagatcgacaagaagaaataatgcacccaaattcagaaatgtcgtctcgagtagaatgaaa 23622439  T
Q  388 ggcatca 394  Q
     ||||||    
T  23622438 agcatca 23622432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 13948783 - 13948864
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtg 241  Q
    |||||||| ||| ||| ||||||| | || ||||||| ||| |||||| |||||||||||||||| ||||||||| ||||||    
T  13948783 tgcttatagcatatcaataataatcaaagtttcaatacaatagggtatatgaaaataaacaacggaactagctagaaacgtg 13948864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 16088697 - 16088654
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgg 203  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||    
T  16088697 tgcttatagcatttcattaatcataatagtttcaatataattgg 16088654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 21092351 - 21092153
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    |||||||||||||||||||||||| | |   ||||||| |||||||||| | |||||||||  |  |||||||||   | |||   |||  | ||||| |    
T  21092351 atgcttataacatttcattaataagagt---ttcaatacaattgggtatttcaaaataaacggcatgactagctaaagatgtgacctctattacaagagc 21092255  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||  ||| | || |||||| |||||| ||||||||||||| |||| |  || || | |||||||| ||| ||||| ||||| |||||||| ||||||    
T  21092254 atgagggaccccattggcttgtcgcctaataaactccaccctagagttagagaaaaaggtactaaacaaagaacgacaagatgaaataatgcagccaaat 21092155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 16569540 - 16569570
Alignment:
Q  155 aaatatgcttataacatttcattaataataa 185  Q
    |||||||||||||||||||||||||||||||    
T  16569540 aaatatgcttataacatttcattaataataa 16569570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 7871937 - 7871965
Alignment:
Q  159 atgcttataacatttcattaataataata 187  Q
    |||||||||||||||||||||||||||||    
T  7871937 atgcttataacatttcattaataataata 7871965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 16088625 - 16088569
Alignment:
Q  250 tgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    ||||||| |||||||||||   || |||||| |||||||||||||||||||| ||||    
T  16088625 tgcaagagcatgagcaaccatattagcttgtcgcctaacaaactccaccctagagtt 16088569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 369
Target Start/End: Complemental strand, 49499561 - 49499347
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||| ||||| ||||||||||||||||| || ||||||| ||| || ||||| |||||||| |||| |||||||||| ||||||| ||||| |||||    
T  49499561 aaatatgtttatagcatttcattaataataagagattcaatacaatcggatatgttaaaataaataacgagactagctagaaacgtggcttctcttgcaa 49499462  T
Q  255 gaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatcc 354  Q
    ||||||||||| || | ||||||||| ||||| |||||||||||||| |||||||||| ||||| || |||||||| ||||| || || |||||||| ||    
T  49499461 gaacatgagcagccacatttgcttgtcgcctagcaaactccaccctagagttggtaaaaaaagagctgaacagagatcgacaagaagaaataatgcaccc 49499362  T
Q  355 aaattcagaagtgtc 369  Q
     ||||| ||| ||||    
T  49499361 gaattctgaaatgtc 49499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 159 - 369
Target Start/End: Original strand, 16739423 - 16739633
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| |||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||| |    
T  16739423 atgcttatagcatttcattgataataatagtttcaatacaattgggtatctcaaaataaacaacgggactagctagtaacgtggcttctcttgcaagagc 16739522  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    || ||||| |||||| | |||| |||||||||||||||||| | |||||| ||| |||| | | ||||  || ||||| || || |||||||| ||||||    
T  16739523 attagcaatctcgttggtttgtcgcctaacaaactccacccgagagttggaaaataaagtagtgaacaacgaacgacaagaagaaataatgcagccaaat 16739622  T
Q  359 tcagaagtgtc 369  Q
    || || |||||    
T  16739623 tcggatgtgtc 16739633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 18357259 - 18357095
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| |||||||| |||||||| || ||||||||| | |||||| | |||||||||||||| | ||||||||||||||| |||||||||||    
T  18357259 aaatatgcttatagcatttcatgaataataagagattcaatatattcgggtatatcaaaataaacaacggaattagctagtaacgtggcttctcctgcaa 18357160  T
Q  255 gaacatgagcaacctcgttt-gcttgttgcctaacaaactccaccctaaagttggtaaagaaaga 318  Q
    || ||||||||| | ||||| |||| |  ||||||||||||||||||| ||||||||||||||||    
T  18357159 gagcatgagcaatcccgtttggcttatcacctaacaaactccaccctagagttggtaaagaaaga 18357095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 356
Target Start/End: Original strand, 6006028 - 6006225
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  ||||||||||||   |||||| ||| | ||||||| |    
T  6006028 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggcgggactagctaaagacgtggcttcccttgcaagagc 6006127  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaa 356  Q
    ||||| |||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| |||||||| || |||||||||||||    
T  6006128 atgagaaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacatgaggaaataatgcatccaa 6006225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 363
Target Start/End: Complemental strand, 17790299 - 17790095
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  |  |||||||||   ||||||  || | ||||||| |    
T  17790299 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggctagactagctaaagacgtggcctcccttgcaagagc 17790200  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
     ||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  17790199 gtgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 17790100  T
Q  359 tcaga 363  Q
    |||||    
T  17790099 tcaga 17790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 363
Target Start/End: Complemental strand, 19098741 - 19098537
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||||||| | |||||||||  |  |||||||||   ||||||  || | ||||||| |    
T  19098741 atgcttatagcatttcatttataataagagtttcaatacaattgggtatattaaaataaacggctagactagctaaagacgtggcctcccttgcaagagc 19098642  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
     ||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  19098641 gtgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaacaaagaacgacaggaggaaataatgcatccaaat 19098542  T
Q  359 tcaga 363  Q
    |||||    
T  19098541 tcaga 19098537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 35906922 - 35907020
Alignment:
Q  156 aatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    |||||||||||| ||||||||| ||||| |||| ||||||| |||||||||| | |||||||||| ||||||||||||||||||||| ||||| |||||    
T  35906922 aatatgcttatagcatttcattgataatgatagtttcaatacaattgggtatctcaaaataaacagcgggactagctagtaacgtggcttctcttgcaa 35907020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 8566161 - 8566012
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| || |||||||  |||||| |||||||||| | | |||| ||| ||||||||||||   ||||||  |||| ||||||| |    
T  8566161 atgcttatagcatttcattgatcataatagtctcaatacaattgggtatatcataatagacagcgggactagctaaagacgtggcctctcgtgcaagagc 8566062  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttgg 308  Q
    |||||| ||| |||| |||||| |||||||||||||||||||| ||||||    
T  8566061 atgagccaccgcgttagcttgtcgcctaacaaactccaccctagagttgg 8566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 360
Target Start/End: Complemental strand, 31228385 - 31228184
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||| ||||||| || ||||||| |||||  ||| | |||||||||  ||||| ||||||   ||||||  ||   ||||||| |    
T  31228385 atgcttatagcatttcatttataataagagtttcaatacaattgaatatattaaaataaactgcgggattagctaaagacgtggcctccattgcaagagc 31228286  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaat 358  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||| ||| || | ||| ||||  || || |||||||||||||||    
T  31228285 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaagtactgaataaagaacgacgggaggaaataatgcatccaaat 31228186  T
Q  359 tc 360  Q
    ||    
T  31228185 tc 31228184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 36144882 - 36144765
Alignment:
Q  150 aaagcaaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcc 249  Q
    |||| ||||||||||||| |||||||||||||| || |||||||||| ||| |||||| |||||||||| |  |||||||| ||||||| |||  ||||     
T  36144882 aaagaaaatatgcttatagcatttcattaataacaagaggttcaatacaatcgggtatatgaaaataaatagtgggactagttagtaacatggcctctcg 36144783  T
Q  250 tgcaagaacatgagcaac 267  Q
    ||||||||||||||||||    
T  36144782 tgcaagaacatgagcaac 36144765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 29372946 - 29373080
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||| ||||||| || ||||||| | | |||||  | |||||||||||| ||||||||||||||||||  ||||| || |||| ||    
T  29372946 tgcttatagcatttcattgataataagagtttcaatacattcgggtaaattaaaataaacaaccggactagctagtaacgtgacttctcttgaaagagca 29373045  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactc 294  Q
    || ||||||||||| | |||| |||||||||||||    
T  29373046 tgggcaacctcgttggtttgtcgcctaacaaactc 29373080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 369
Target Start/End: Complemental strand, 18342786 - 18342570
Alignment:
Q  155 aaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaa 254  Q
    ||||||||||||| |||||||| |||||||| || ||  ||| | | | |||| | |||||||||||||| ||||||||||||||| | |||| ||||||    
T  18342786 aaatatgcttatagcatttcatgaataataagagattttatacattcgagtatattaaaataaacaacggaactagctagtaacgtagcttcttctgcaa 18342687  T
Q  255 gaacatgagcaacctcgttt-gcttgttgcctaacaaactccaccctaaag-ttggtaaagaaagaactaaacagagaccgacatgatgagataatgcat 352  Q
     | ||||||||| | ||||| |||||| | |||||||||| ||||||| || |||||||||||| | || || |  || |||||||| || ||||| ||     
T  18342686 tagcatgagcaatcccgtttggcttgtcgtctaacaaacttcaccctagagtttggtaaagaaaaatctgaataacgaacgacatgaagaaataatacaa 18342587  T
Q  353 ccaaattcagaagtgtc 369  Q
    | |||||||||| ||||    
T  18342586 cgaaattcagaattgtc 18342570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 363
Target Start/End: Complemental strand, 31809305 - 31809105
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||| |||||||||||| |||||||  |||||| |||||| ||| | | |||||||  ||||||||||||   ||||||  |||| |||||||  ||||    
T  31809305 ttatagcatttcattaattataatagtctcaatacaattggatatatcataataaacggcgggactagctaaagacgtggcctctcgtgcaagaggatga 31809206  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattcag 362  Q
    || ||| |||| |||||| |||||||||||||||||||| |||||| ||| |||  || ||||| ||| ||||| || || |||||  | ||||||||||    
T  31809205 gccaccgcgttggcttgtcgcctaacaaactccaccctagagttggaaaataaattacgaaacaaagaacgacaagaagaaataatagaaccaaattcag 31809106  T
Q  363 a 363  Q
    |    
T  31809105 a 31809105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 306
Target Start/End: Complemental strand, 31935386 - 31935240
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||| | |||||||||||| || | || ||||||| |||||||||| | | |||||||  ||||||||||||   ||||||  |||| ||||||| ||    
T  31935386 tgcttagagcatttcattaatcatcaaagattcaatacaattgggtatatcataataaacggcgggactagctaaagacgtggcctctcgtgcaagagca 31935287  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    ||||||||  |||| |||||| |||||||||||||||||||| ||||    
T  31935286 tgagcaactgcgttggcttgtcgcctaacaaactccaccctagagtt 31935240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 298
Target Start/End: Complemental strand, 31973644 - 31973506
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||| | |||||||||||| || | || ||||||| |||||||||| | | |||||||  ||||||||||||   ||||||  |||| ||||||| ||    
T  31973644 tgcttagagcatttcattaatcattaaagattcaatacaattgggtatatcataataaacggcgggactagctaaagacgtggcctctcgtgcaagagca 31973545  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccacc 298  Q
    ||||||||| |||| |||||| |||||||||||||||||    
T  31973544 tgagcaaccgcgttggcttgtcgcctaacaaactccacc 31973506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 306
Target Start/End: Original strand, 31660977 - 31661113
Alignment:
Q  170 atttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacct 269  Q
    ||||||||||| || | || ||||||| |||||||||| | | |||||||  ||||||||| ||  || |||   |||| ||||||| |||||||||||     
T  31660977 atttcattaatcattaaagattcaatacaattgggtatatcataataaacggcgggactagataaaaaagtgacctctcgtgcaagagcatgagcaaccg 31661076  T
Q  270 cgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||| |||||| |||||||||||||||||||| ||||    
T  31661077 cgttggcttgtcgcctaacaaactccaccctagagtt 31661113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 19602912 - 19603059
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || || |||| ||| || ||| |  |||||||    |||||||||||  ||||| | ||||| |||||||      
T  19602912 atgcttatagcatttcattaataataagagattaaatacaatcggatatatcgaaataaatgctgggactagctaaaaacgtcgcttctcttgcaagagt 19603011  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    |||||||||| ||||  |||||  ||||||||||||||||||| ||||    
T  19603012 atgagcaaccgcgttgccttgtcacctaacaaactccaccctagagtt 19603059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 361
Target Start/End: Original strand, 38015060 - 38015257
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||| ||||||||| ||||||| || ||||||| ||| | |||| | | |||| ||| || |||||| ||||||||||   |||| ||||||  ||| |    
T  38015060 ttatagcatttcattgataataagagattcaatacaat-gagtatatcataatagacagcgagactagttagtaacgtgacatctcttgcaagtgcataa 38015158  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataatgcatccaaattca 361  Q
    |||||| |||| |||||| ||||||||||||||||| || |||| | ||| |||||  |||||| ||| |||||  | |  |||||||| |||||||||    
T  38015159 gcaaccccgttagcttgtcgcctaacaaactccaccatagagttagaaaataaagagttaaacaaagaacgacaataagtaataatgcaaccaaattca 38015257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 53437682 - 53437525
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || |||||||||| |  | || | ||||||||| ||  |||||||||   | |||| ||||| ||||||| |    
T  53437682 atgcttatagcatttcattaataataagagtttcaatataa-tcagaatatcaaaataaactacacgactagctaaagatgtggcttctcttgcaagagc 53437584  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaag 317  Q
    |||||||| | | ||  |||||  ||||||||||||||||||| |||| | ||||||||    
T  53437583 atgagcaatcgcattgacttgtctcctaacaaactccaccctagagttagaaaagaaag 53437525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 394
Target Start/End: Original strand, 19770609 - 19770754
Alignment:
Q  249 ctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataat 348  Q
    |||||||| |||||| ||||  ||| | ||||  ||||||||||| |||| || |||||||||||||||| || || |  || |||||||| || |||||    
T  19770609 ctgcaagagcatgagaaaccctgttggtttgtcacctaacaaactacaccttagagttggtaaagaaagagctgaataaggaacgacatgaagaaataat 19770708  T
Q  349 gcatccaaattcagaagtgtcatctcgattagcatggaaggcatca 394  Q
      | | ||||||||||||||| || ||| ||||||| |||||||||    
T  19770709 aaaccaaaattcagaagtgtcgtcccgagtagcatgaaaggcatca 19770754  T

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Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 53394981 - 53394825
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || |||||||||| |  | || | |||||||||  |  |||||||||   |||||| ||||| ||||||| |    
T  53394981 atgcttatagcatttcattaataataagagtttcaatataa-tcagaatatcaaaataaactgcacgactagctaaagacgtggcttctcttgcaagagc 53394883  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaa 316  Q
    |||||||||| | ||  |||||  ||||| ||||||||||||| |||| | |||||||    
T  53394882 atgagcaaccgcattcacttgtctcctaaaaaactccaccctagagttagaaaagaaa 53394825  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 4479866 - 4479903
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4479866 atgcttataacatttcattaataataatagattcaata 4479903  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 14485691 - 14485654
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  14485691 atgcttatagcatttcattaataataataggttcaata 14485654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 36144766 - 36144722
Alignment:
Q  334 acatgatgagataatgcatccaaattcagaagtgtcatctcgatt 378  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||    
T  36144766 acatgatgatataatgcacccaaattcagaagtgtcgtctcgatt 36144722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 16877963 - 16878000
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaata 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  16877963 atgcttatagcatttcattaataataatagtttcaata 16878000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 45004332 - 45004299
Alignment:
Q  163 ttataacatttcattaataataataggttcaata 196  Q
    ||||| ||||||||||||||||||||||||||||    
T  45004332 ttatagcatttcattaataataataggttcaata 45004299  T

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Target: scaffold0031 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 150 - 364
Target Start/End: Complemental strand, 44633 - 44418
Alignment:
Q  150 aaagcaaatatgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcc 249  Q
    |||| |||||| ||||||  |||||||||||||||| |||||||||| ||| |||||| | |||||||||||| ||| ||||||||||  ||  ||||      
T  44633 aaaggaaatatccttatagaatttcattaataataagaggttcaatacaatcgggtatattaaaataaacaacaggattagctagtaatatgatttcttt 44534  T
Q  250 t-gcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaagaactaaacagagaccgacatgatgagataat 348  Q
    | ||||||| |||||  | | ||| ||||||| |||||||||||| || |||| | ||||||||||||||||| || ||||| |||||||||||||||||    
T  44533 ttgcaagaatatgagtgatcccgtgtgcttgtcgcctaacaaactacatcctagaattggtaaagaaagaactgaaaagagatcgacatgatgagataat 44434  T
Q  349 gcatccaaattcagaa 364  Q
     ||| |||||||||||    
T  44433 acattcaaattcagaa 44418  T

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Target: scaffold0341 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 1929 - 2025
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaag 255  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||| | |||||||||||||||||  |||| |||||||    
T  1929 atgcttataacatttcattaataataacaggttcaatacatttgggtatattaaaataaacaaagagactagctagtaacgtgacttcttctgcaag 2025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 9585 - 9681
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaag 255  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||| | |||||||||||||||||  |||| |||||||    
T  9585 atgcttataacatttcattaataataacaggttcaatacatttgggtatattaaaataaacaaagagactagctagtaacgtgacttcttctgcaag 9681  T

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Target: scaffold0040 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 62481 - 62638
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaac 258  Q
    ||||||||| ||||||||||||||||| || ||||||| ||||| |||| | |||||||||| ||||||||||||   | ||||  |  |  | ||||      
T  62481 atgcttatagcatttcattaataataagagtttcaatacaattgagtatattaaaataaacagcgggactagctaaagaagtggcctacctagaaagaga 62580  T
Q  259 atgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaagaaa 316  Q
    |||||||||| |||| |||||| |||||||||||||||||||| |||| | |||||||    
T  62581 atgagcaaccacgttggcttgtcgcctaacaaactccaccctagagttagaaaagaaa 62638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 160 - 312
Target Start/End: Complemental strand, 1194 - 1042
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||||||||| | |  ||||||| |||||||||| |||||||||| | |||||||||| || || |||| ||| | || ||||       
T  1194 tgcttatagcatttcattaataatcaaacattcaatacaattgggtatatgaaaataaatagcgggactagcgagaaatgtggcttcccttgtaagattg 1095  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    ||||| ||| | || | |||| |||||||||||||||||||| ||||||||||    
T  1094 tgagccaccacattagtttgtcgcctaacaaactccaccctagagttggtaaa 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 299
Target Start/End: Original strand, 73335 - 73471
Alignment:
Q  163 ttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatga 262  Q
    ||||||||| ||||||||||| | || ||||||| |||||||||| | ||| |||||||||||||||||||| |||||||  |||||||| ||   || |    
T  73335 ttataacatatcattaataatcaaagtttcaatacaattgggtatataaaagtaaacaacgggactagctagaaacgtggtctctcctgcgagtgtatca 73434  T
Q  263 gcaacctcgtttgcttgttgcctaacaaactccaccc 299  Q
    |||||| | |||||||||  | || ||||||||||||    
T  73435 gcaaccacatttgcttgtctcttagcaaactccaccc 73471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 191051 - 191162
Alignment:
Q  213 aataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagttggtaaa 312  Q
    |||||| | ||||||||| ||  ||||||| || || ||||||  ||||||||||| |||| |||||| |||||||||||||||||||| |||| | |||    
T  191051 aataaatagcgggactagttaagaacgtggcttttcttgcaagtgcatgagcaaccgcgttggcttgtcgcctaacaaactccaccctagagttagaaaa 191150  T
Q  313 gaaagaactaaa 324  Q
    ||||||||||||    
T  191151 gaaagaactaaa 191162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 306
Target Start/End: Original strand, 4210 - 4356
Alignment:
Q  160 tgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaaca 259  Q
    |||||||| ||||||||| |||||||||| ||||||| || ||||||| | | | ||||   ||||||||||||   | ||||  | || ||||| | ||    
T  4210 tgcttatagcatttcattgataataatagtttcaatacaagtgggtatatcatattaaatggcgggactagctaaagatgtggcctttcgtgcaatagca 4309  T
Q  260 tgagcaacctcgtttgcttgttgcctaacaaactccaccctaaagtt 306  Q
    ||||||||||| || |||||| |||||||||||||||||||| ||||    
T  4310 tgagcaacctctttggcttgtcgcctaacaaactccaccctagagtt 4356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 42466 - 42576
Alignment:
Q  202 gggtatgtgaaaataaacaacgggactagctagtaacgtgggttctcctgcaagaacatgagcaacctcgtttgcttgttgcctaacaaactccacccta 301  Q
    |||||| | |||||||||||||||||||||  | |||||||  |||||| | |||  |||| ||||| |||||| |||| ||||| |||||||||||| |    
T  42466 gggtatataaaaataaacaacgggactagcgtgaaacgtggcctctcctacgagagtatgaacaaccacgtttgtttgtcgcctagcaaactccacccga 42565  T
Q  302 aagttggtaaa 312  Q
     ||||| ||||    
T  42566 gagttgttaaa 42576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 21815 - 21874
Alignment:
Q  159 atgcttataacatttcattaataataataggttcaatataattgggtatgtgaaaataaa 218  Q
    ||||||||||||||||||| ||||||| || ||||||| ||||||| || | ||||||||    
T  21815 atgcttataacatttcatttataataagagattcaatacaattggggatataaaaataaa 21874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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