View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12338_low_1 (Length: 976)

Name: NF12338_low_1
Description: NF12338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12338_low_1
NF12338_low_1
[»] chr7 (3 HSPs)
chr7 (1-273)||(13410351-13410622)
chr7 (274-476)||(13410646-13410847)
chr7 (824-940)||(23680408-23680524)
[»] chr5 (4 HSPs)
chr5 (1-273)||(3276313-3276583)
chr5 (274-410)||(3276153-3276289)
chr5 (823-940)||(23357025-23357142)
chr5 (823-940)||(32891543-32891659)
[»] chr4 (7 HSPs)
chr4 (514-701)||(11101845-11102029)
chr4 (826-940)||(440242-440356)
chr4 (823-940)||(4655948-4656065)
chr4 (824-940)||(3504514-3504630)
chr4 (871-941)||(12200475-12200545)
chr4 (768-822)||(11103473-11103527)
chr4 (732-762)||(11102034-11102064)
[»] chr3 (2 HSPs)
chr3 (826-940)||(15796568-15796682)
chr3 (826-940)||(4324452-4324566)
[»] chr1 (3 HSPs)
chr1 (825-940)||(32645503-32645618)
chr1 (823-936)||(24607615-24607730)
chr1 (865-917)||(51811221-51811273)
[»] chr8 (3 HSPs)
chr8 (826-940)||(31104101-31104215)
chr8 (823-940)||(43603725-43603842)
chr8 (874-911)||(28133715-28133752)
[»] chr6 (1 HSPs)
chr6 (823-940)||(2025770-2025888)
[»] chr2 (2 HSPs)
chr2 (450-508)||(45531790-45531848)
chr2 (854-919)||(39238019-39238084)


Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-130; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 13410351 - 13410622
Alignment:
Q  1 tgagattaaaaatgcccgtaaagtattggtagtacacaacttttcctatcataagagagactaaggtctgcccctccaagggattgcagtgttttgttta 100  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13410351 tgagattaaaaatgccagtgaagtattggtagtacacaacttttcctatcataagagagactaaggtctgcccctccaaggaattgcagtgttttgttta 13410450  T
Q  101 cttatggatcattcaaaggctgaaacttgttcctataagaagccagaaaagtagagtatatgaaacatcaaaatttgtgttcaaaaggagttaaggtttg 200  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  13410451 cttatggatcattcaaaggctgaaacttgttcatataagaa-ccagaaaagtagagtatctgaaacatcaaaatttgtgttcaaacgaagttaaggtttg 13410549  T
Q  201 ggaatagaaatttggaaaaaatcaaaatgcaatgaaattgagaggaaactcaccctgaaggtaatttaaatga 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13410550 ggaatagaaatttggaaaaaatcaaaatgcaatgaaattgagaggaaactcaccctgaaggtaatttaaatga 13410622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 274 - 476
Target Start/End: Original strand, 13410646 - 13410847
Alignment:
Q  274 tagatggtggcattaaagatggatgtttcaaggaaagtggacgagagaaaacaagttaattttgaaaccaagagtgataaaatatgcagataaaagaatt 373  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  13410646 tagacggtggcattcaagatggatgtttcaaggaaagtggacgagagaaaacaagttaattt-gtaaccaagagtgataaaatatgcagataaaagaatt 13410744  T
Q  374 gagttagaatatcttactttttgaagtaatatgccatttataatccatccaagaaaccatttaccactgcgcttcagaatacttgtgaattctataagca 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13410745 gagttagaatatcttactttttgaagtaatatgccatttataatttatccaagaaaccatttaccactgcgcttcagaatacttgtgaattctataagca 13410844  T
Q  474 taa 476  Q
    |||    
T  13410845 taa 13410847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 824 - 940
Target Start/End: Original strand, 23680408 - 23680524
Alignment:
Q  824 gtatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggta 923  Q
    ||||||||||||||||| ||||||||| ||||||||| || |||||| ||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  23680408 gtatgtgtttggaatactggtggaaagttcaaaaaagtacgtctaggtaaaagttagaatttccagcttcataaaatcacgataaaagtgacattgggta 23680507  T
Q  924 gcgtgcaccgtgaaaaa 940  Q
    ||||||||||| |||||    
T  23680508 gcgtgcaccgtaaaaaa 23680524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 213; Significance: 1e-116; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 3276583 - 3276313
Alignment:
Q  1 tgagattaaaaatgcccgtaaagtattggtagtacacaacttttcctatcataagagagactaaggtctgcccctccaagggattgcagtgttttgttta 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  3276583 tgagattaaaaatgcccgtaaagtattggcagtacacaacttttcctatcataagagagactaaggtctgcccctccaaggaattgcagcgttttgttta 3276484  T
Q  101 cttatggatcattcaaaggctgaaacttgttcctataagaagccagaaaagtagagtatatgaaacatcaaaatttgtgttcaaaaggagttaaggtttg 200  Q
    ||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  3276483 cttatggatcattcaaaggttgaaacttgttcatgtaagaa-ccagaaaagtagagtatctgaaacatcaaaatttgtgttcaaaaggagttatggtttg 3276385  T
Q  201 ggaatagaaatttggaaaaaatcaaaatgcaatgaaattgagaggaaactcaccctgaaggtaatttaaatga 273  Q
    |||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3276384 ggaataaaaatttggaagcaat-aaaatgcaatgaaattgagaggaaactcaccctgaaggtaatttaaatga 3276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 274 - 410
Target Start/End: Complemental strand, 3276289 - 3276153
Alignment:
Q  274 tagatggtggcattaaagatggatgtttcaaggaaagtggacgagagaaaacaagttaattttgaaaccaagagtgataaaatatgcagataaaagaatt 373  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3276289 tagattgtggcattaaagatggatgtttcaaggaaagtggaagagagaaaacaagttaattt-gtaaccaagagtgataaaatatgcagataaaagaatt 3276191  T
Q  374 gagttagaatatctta-ctttttgaagtaatatgccat 410  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3276190 gagttagaatatcttacctttttgaagtaatatgccat 3276153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 823 - 940
Target Start/End: Complemental strand, 23357142 - 23357025
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggt 922  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||| |||||||    
T  23357142 agtatgtgtttggaataccggtggaaagctcaaaaaagcacttttaggcaaaagctggaattttcagcttcataaaatcatagtaaaagtgatattgggt 23357043  T
Q  923 agcgtgcaccgtgaaaaa 940  Q
    ||||||||||||||||||    
T  23357042 agcgtgcaccgtgaaaaa 23357025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 823 - 940
Target Start/End: Complemental strand, 32891659 - 32891543
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaagc-acttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattggg 921  Q
    |||||||||||||||||| |||| |||||| |||||| | || | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  32891659 agtatgtgtttggaataccggtgcaaagctaaaaaaacccacgtttaggcaaaagctggaatttccagcttcataaaatcacggtaaaa--gacattgga 32891562  T
Q  922 tagcgtgcaccgtgaaaaa 940  Q
     | ||||||||||||||||    
T  32891561 aaacgtgcaccgtgaaaaa 32891543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 1e-56; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 514 - 701
Target Start/End: Original strand, 11101845 - 11102029
Alignment:
Q  514 catagcttgtgtgtccataaatgataatattgataaaaggatggaaaactatattgcttagacggtcgagataaaacataaaataagatttataagatta 613  Q
    ||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| ||||  | ||||||||||||||||||||| |||||||||||    
T  11101845 catagcttgtgtgtctatagatgataatattgataaacagatggaaaactatattgctgagacaatggagataaaacataaaataaga-ttataagatta 11101943  T
Q  614 tttttcaaagtaaagggtgtgcatgtgcacaccgtcaccaacgagtttcattactggtgaaagttatttaactttattctccattttc 701  Q
    ||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  11101944 tttttcagagtaaa--gtgtgcatgtgcacaccatcaccaacgagtttcattactagtgaaacagatttaactttattctccattttc 11102029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 826 - 940
Target Start/End: Complemental strand, 440356 - 440242
Alignment:
Q  826 atgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtagc 925  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  440356 atgtgtttggaataccggtggaaagctcaaaaaagcacttttaggcaaaagctggaatttccagcttcataaaatcacagtaaaagtgatattgggtagc 440257  T
Q  926 gtgcaccgtgaaaaa 940  Q
    |||||||||||||||    
T  440256 gtgcaccgtgaaaaa 440242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 823 - 940
Target Start/End: Original strand, 4655948 - 4656065
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggt 922  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||  ||    
T  4655948 agtatgtgtttggaataccggtggaaagctcaaaaaagcacttttaggcaaaatctggaattttcagcttcataaaatcactgtaaaagtgacattatgt 4656047  T
Q  923 agcgtgcaccgtgaaaaa 940  Q
    ||||||||||||||||||    
T  4656048 agcgtgcaccgtgaaaaa 4656065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 824 - 940
Target Start/End: Complemental strand, 3504630 - 3504514
Alignment:
Q  824 gtatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggta 923  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||||||||||||||||    
T  3504630 gtatgtgtttggaataccggtggaaagctcaaaaaagcacttctaggcaaaagctgagattttcagcttcataaaatcatagtaaaagtgacattgggta 3504531  T
Q  924 gcgtgcaccgtgaaaaa 940  Q
    ||||||||||| |||||    
T  3504530 gcgtgcaccgtaaaaaa 3504514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 871 - 941
Target Start/End: Original strand, 12200475 - 12200545
Alignment:
Q  871 caaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtagcgtgcaccgtgaaaaat 941  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  | ||| |||||| ||||||    
T  12200475 caaaagctggaatttccagcttcataaagtcacggtaaaagtgacattggaaaacgtacaccgtaaaaaat 12200545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 768 - 822
Target Start/End: Original strand, 11103473 - 11103527
Alignment:
Q  768 taagactaaaaacttaaccattgccctatcacagtgataaatagttaaaccactc 822  Q
    |||||||||||||  ||||||| ||||||||||||||||||| | ||||||||||    
T  11103473 taagactaaaaaccgaaccatttccctatcacagtgataaatggctaaaccactc 11103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 732 - 762
Target Start/End: Original strand, 11102034 - 11102064
Alignment:
Q  732 atattactatcaaggaaatactttcatacaa 762  Q
    |||||||||||||||||||||||||||||||    
T  11102034 atattactatcaaggaaatactttcatacaa 11102064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 4e-53; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 826 - 940
Target Start/End: Complemental strand, 15796682 - 15796568
Alignment:
Q  826 atgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtagc 925  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15796682 atgtgtttggaataccggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgatattgggtagc 15796583  T
Q  926 gtgcaccgtgaaaaa 940  Q
    |||||||||||||||    
T  15796582 gtgcaccgtgaaaaa 15796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 826 - 940
Target Start/End: Original strand, 4324452 - 4324566
Alignment:
Q  826 atgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtagc 925  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  4324452 atgtgtttggaataccggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacagtaaaagtgatattgggtagc 4324551  T
Q  926 gtgcaccgtgaaaaa 940  Q
    |||||||||||||||    
T  4324552 gtgcaccgtgaaaaa 4324566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 6e-49; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 825 - 940
Target Start/End: Complemental strand, 32645618 - 32645503
Alignment:
Q  825 tatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtag 924  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  32645618 tatgtgtttggaataccggtggaaagctcaaaaaagcacgtctaggcaaaagttggaatttccagcttcataaaatcacggtaaaagtgacattggatag 32645519  T
Q  925 cgtgcaccgtgaaaaa 940  Q
    ||||||||||||||||    
T  32645518 cgtgcaccgtgaaaaa 32645503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 823 - 936
Target Start/End: Complemental strand, 24607730 - 24607615
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaa--gcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgg 920  Q
    |||||||||||||||||| |||| |||||  ||||||  |||| ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  24607730 agtatgtgtttggaataccggtgcaaagccaaaaaaaacgcacgtctaggcaaaagctggaattttcagcttcataaagtcacggtaaaagtaacattgg 24607631  T
Q  921 gtagcgtgcaccgtga 936  Q
    | |||||| |||||||    
T  24607630 gaagcgtgaaccgtga 24607615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 865 - 917
Target Start/End: Complemental strand, 51811273 - 51811221
Alignment:
Q  865 tctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacat 917  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||    
T  51811273 tctaggaaaaagccggaatttctagcttcataaagtcacggtaaaagtgacat 51811221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 826 - 940
Target Start/End: Original strand, 31104101 - 31104215
Alignment:
Q  826 atgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggtagc 925  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  31104101 atgtgtttggaataccggtggaaagctcaaaaaagcacttctaagcaaaagctggaatttccagcttcataaaatcacagtaaaagtgatattgggtagc 31104200  T
Q  926 gtgcaccgtgaaaaa 940  Q
    |||||||||||||||    
T  31104201 gtgcaccgtgaaaaa 31104215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 823 - 940
Target Start/End: Complemental strand, 43603842 - 43603725
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattgggt 922  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  43603842 agtatgtgtttgaaataccggtggaaagctcaaaaaagcacttttaggcaaaagctggaatttccagcttcataaaatcacgctaaaagtgacattggat 43603743  T
Q  923 agcgtgcaccgtgaaaaa 940  Q
    |||||||| |||||||||    
T  43603742 agcgtgcatcgtgaaaaa 43603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 874 - 911
Target Start/End: Complemental strand, 28133752 - 28133715
Alignment:
Q  874 aagctggaatttccagcttcataaaatcacggtaaaag 911  Q
    ||||| || |||||||||||||||||||||||||||||    
T  28133752 aagctagagtttccagcttcataaaatcacggtaaaag 28133715  T

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Target: chr6 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 823 - 940
Target Start/End: Complemental strand, 2025888 - 2025770
Alignment:
Q  823 agtatgtgtttggaatacgggtggaaagctcaaaaaag-cacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattggg 921  Q
    |||||||||||||||||| ||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| |||| |    
T  2025888 agtatgtgtttggaataccggtggaaagctcaaaaaaaacacgtctaagcaaaagcaggaatttccagcttcataaaatcacagtaaaagtgatattgag 2025789  T
Q  922 tagcgtgcaccgtgaaaaa 940  Q
    || ||||||||||||||||    
T  2025788 taacgtgcaccgtgaaaaa 2025770  T

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Target: chr2 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 45531848 - 45531790
Alignment:
Q  450 gaatacttgtgaattctataagcataacatgaggtacaattataagatatatgtctaac 508  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45531848 gaatacttgtgaattctataagcatgacatgaggtacaattataagatatatgtctaac 45531790  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 854 - 919
Target Start/End: Complemental strand, 39238084 - 39238019
Alignment:
Q  854 aaaaaagcacttctaggcaaaagctggaatttccagcttcataaaatcacggtaaaagtgacattg 919  Q
    ||||| |||| |||||||||||||||| |||| |||||||||||| ||||||||||||| ||||||    
T  39238084 aaaaatgcacgtctaggcaaaagctggtattttcagcttcataaagtcacggtaaaagtcacattg 39238019  T

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