View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12341_low_1 (Length: 628)

Name: NF12341_low_1
Description: NF12341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12341_low_1
NF12341_low_1
[»] chr4 (63 HSPs)
chr4 (181-614)||(51918238-51918670)
chr4 (181-325)||(25477316-25477458)
chr4 (181-341)||(24072858-24073016)
chr4 (181-339)||(43800899-43801055)
chr4 (181-325)||(37624996-37625139)
chr4 (181-329)||(54359774-54359919)
chr4 (181-339)||(12624787-12624943)
chr4 (181-339)||(52198587-52198742)
chr4 (181-307)||(33246388-33246511)
chr4 (181-340)||(22750699-22750856)
chr4 (181-272)||(52226110-52226202)
chr4 (219-325)||(5536613-5536717)
chr4 (181-339)||(40411201-40411357)
chr4 (181-339)||(46729396-46729552)
chr4 (181-338)||(21171815-21171969)
chr4 (181-341)||(39237444-39237603)
chr4 (181-304)||(41945666-41945787)
chr4 (181-339)||(54438601-54438757)
chr4 (181-339)||(22651555-22651711)
chr4 (246-339)||(34543861-34543952)
chr4 (181-339)||(51787862-51788017)
chr4 (181-340)||(20116541-20116699)
chr4 (181-341)||(38136446-38136599)
chr4 (181-273)||(39414325-39414417)
chr4 (181-323)||(39196907-39197048)
chr4 (181-236)||(41919997-41920052)
chr4 (181-236)||(52552470-52552525)
chr4 (246-324)||(54701167-54701243)
chr4 (181-342)||(30153078-30153236)
chr4 (181-339)||(31917468-31917622)
chr4 (189-340)||(5168078-5168227)
chr4 (181-324)||(10602083-10602224)
chr4 (181-340)||(16070522-16070679)
chr4 (181-307)||(43509172-43509297)
chr4 (181-236)||(20185615-20185670)
chr4 (181-342)||(20293838-20293998)
chr4 (181-274)||(20291431-20291523)
chr4 (247-330)||(5933043-5933124)
chr4 (181-274)||(7002274-7002366)
chr4 (181-237)||(21121058-21121114)
chr4 (287-339)||(28115099-28115151)
chr4 (181-237)||(31552259-31552315)
chr4 (246-341)||(31936950-31937043)
chr4 (181-324)||(44812480-44812621)
chr4 (187-273)||(13096463-13096550)
chr4 (181-236)||(20262353-20262408)
chr4 (181-235)||(5448753-5448807)
chr4 (181-273)||(14602573-14602669)
chr4 (181-339)||(31840187-31840342)
chr4 (181-227)||(41459678-41459724)
chr4 (181-322)||(48472371-48472509)
chr4 (181-270)||(48609445-48609534)
chr4 (246-341)||(50782928-50783020)
chr4 (181-237)||(726695-726751)
chr4 (181-237)||(754093-754149)
chr4 (181-237)||(26203221-26203277)
chr4 (181-237)||(32236922-32236978)
chr4 (181-237)||(56217011-56217067)
chr4 (246-336)||(20792147-20792235)
chr4 (188-237)||(19654526-19654575)
chr4 (189-271)||(56373269-56373350)
chr4 (181-237)||(10541215-10541271)
chr4 (246-274)||(56216685-56216713)
[»] chr3 (53 HSPs)
chr3 (181-341)||(20945158-20945316)
chr3 (181-340)||(26517074-26517231)
chr3 (181-339)||(46048612-46048769)
chr3 (181-341)||(29676599-29676755)
chr3 (181-339)||(31530988-31531144)
chr3 (181-339)||(44083717-44083873)
chr3 (181-339)||(12077601-12077759)
chr3 (181-342)||(31819496-31819655)
chr3 (181-340)||(29349468-29349625)
chr3 (181-271)||(41308702-41308792)
chr3 (181-339)||(42891509-42891664)
chr3 (181-337)||(28477475-28477628)
chr3 (181-324)||(14645764-14645905)
chr3 (181-269)||(30476131-30476219)
chr3 (181-339)||(35145321-35145477)
chr3 (181-237)||(50363117-50363173)
chr3 (181-324)||(50524851-50524992)
chr3 (181-272)||(5504500-5504591)
chr3 (181-272)||(11388211-11388304)
chr3 (246-339)||(29645479-29645570)
chr3 (181-324)||(26043109-26043247)
chr3 (181-237)||(48309534-48309590)
chr3 (247-341)||(3475606-3475698)
chr3 (248-342)||(11345477-11345569)
chr3 (181-336)||(13084223-13084374)
chr3 (181-272)||(21933016-21933107)
chr3 (189-330)||(40645772-40645909)
chr3 (181-325)||(41727112-41727254)
chr3 (181-237)||(28229255-28229311)
chr3 (181-274)||(35055876-35055968)
chr3 (181-273)||(11396811-11396905)
chr3 (181-330)||(39617121-39617266)
chr3 (181-237)||(27638037-27638093)
chr3 (289-341)||(30476221-30476273)
chr3 (181-237)||(33287956-33288012)
chr3 (181-237)||(44338171-44338227)
chr3 (181-237)||(48581408-48581464)
chr3 (246-339)||(25750673-25750765)
chr3 (181-272)||(41739898-41739989)
chr3 (246-307)||(11140851-11140910)
chr3 (181-273)||(831284-831376)
chr3 (181-237)||(2421174-2421230)
chr3 (189-237)||(31474522-31474570)
chr3 (181-237)||(35765604-35765660)
chr3 (181-237)||(42010958-42011014)
chr3 (181-324)||(44698396-44698536)
chr3 (181-339)||(51263172-51263329)
chr3 (246-339)||(26999198-26999289)
chr3 (181-227)||(41825107-41825153)
chr3 (181-233)||(14754703-14754755)
chr3 (181-225)||(31650610-31650654)
chr3 (246-337)||(34055727-34055816)
chr3 (181-237)||(48903043-48903099)
[»] chr1 (55 HSPs)
chr1 (181-339)||(5084946-5085102)
chr1 (181-340)||(15512637-15512794)
chr1 (181-340)||(28948820-28948977)
chr1 (181-330)||(48721735-48721881)
chr1 (181-340)||(3831137-3831294)
chr1 (181-340)||(36085060-36085217)
chr1 (184-339)||(5321879-5322033)
chr1 (181-340)||(4817762-4817919)
chr1 (181-340)||(4829562-4829719)
chr1 (181-340)||(34012577-34012733)
chr1 (181-340)||(51390394-51390550)
chr1 (181-342)||(52141029-52141188)
chr1 (181-340)||(3143493-3143651)
chr1 (185-307)||(33231934-33232054)
chr1 (181-339)||(46591192-46591348)
chr1 (181-325)||(34696754-34696896)
chr1 (181-320)||(47643630-47643767)
chr1 (181-324)||(32152248-32152387)
chr1 (181-307)||(46732850-46732973)
chr1 (181-339)||(25063300-25063458)
chr1 (181-267)||(44652788-44652874)
chr1 (181-237)||(3072227-3072283)
chr1 (181-340)||(8877862-8878017)
chr1 (181-273)||(13145508-13145600)
chr1 (181-273)||(23982513-23982605)
chr1 (181-335)||(28334081-28334234)
chr1 (181-307)||(51997045-51997170)
chr1 (181-307)||(28723539-28723666)
chr1 (246-340)||(32715948-32716039)
chr1 (181-274)||(13698921-13699014)
chr1 (181-237)||(20564865-20564921)
chr1 (181-237)||(29140611-29140667)
chr1 (185-340)||(30898419-30898572)
chr1 (181-272)||(4082016-4082107)
chr1 (181-274)||(8984582-8984674)
chr1 (181-326)||(35365852-35365997)
chr1 (181-234)||(47070921-47070974)
chr1 (181-324)||(2342994-2343131)
chr1 (181-237)||(30336149-30336205)
chr1 (181-237)||(32144401-32144457)
chr1 (181-236)||(15179500-15179555)
chr1 (181-271)||(6282694-6282784)
chr1 (14-52)||(10443489-10443527)
chr1 (181-304)||(32047530-32047651)
chr1 (246-328)||(29302357-29302437)
chr1 (288-339)||(31305464-31305515)
chr1 (181-330)||(25269467-25269613)
chr1 (181-227)||(31807939-31807985)
chr1 (181-226)||(34028469-34028514)
chr1 (181-237)||(291592-291648)
chr1 (246-274)||(5852624-5852652)
chr1 (181-237)||(10842417-10842473)
chr1 (185-237)||(15911509-15911561)
chr1 (246-274)||(16582690-16582718)
chr1 (181-236)||(44335382-44335438)
[»] chr8 (56 HSPs)
chr8 (181-325)||(57061-57203)
chr8 (181-341)||(31252512-31252670)
chr8 (181-336)||(25198380-25198532)
chr8 (181-339)||(38773207-38773363)
chr8 (181-324)||(38761230-38761373)
chr8 (181-341)||(43980440-43980598)
chr8 (181-340)||(26878586-26878743)
chr8 (181-340)||(40517831-40517988)
chr8 (181-343)||(12762933-12763092)
chr8 (181-339)||(45183721-45183876)
chr8 (181-339)||(24512025-24512182)
chr8 (181-267)||(45203849-45203935)
chr8 (181-325)||(31746279-31746420)
chr8 (181-340)||(41087065-41087221)
chr8 (181-339)||(24962224-24962380)
chr8 (181-322)||(1769325-1769463)
chr8 (181-322)||(5191425-5191564)
chr8 (181-338)||(10396090-10396245)
chr8 (181-325)||(38202865-38203007)
chr8 (181-325)||(40790879-40791021)
chr8 (181-272)||(36437592-36437684)
chr8 (181-342)||(34158008-34158166)
chr8 (181-340)||(1177013-1177171)
chr8 (184-339)||(7172313-7172464)
chr8 (181-324)||(25185121-25185265)
chr8 (181-302)||(37600783-37600903)
chr8 (184-323)||(40337066-40337203)
chr8 (181-307)||(40807902-40808026)
chr8 (183-273)||(14522267-14522357)
chr8 (181-274)||(22590466-22590559)
chr8 (189-337)||(43191342-43191484)
chr8 (181-237)||(36309555-36309611)
chr8 (183-341)||(45185123-45185280)
chr8 (187-330)||(30262408-30262547)
chr8 (182-237)||(41371763-41371818)
chr8 (181-234)||(14577614-14577667)
chr8 (181-337)||(17933796-17933948)
chr8 (246-325)||(7772667-7772744)
chr8 (181-236)||(10709405-10709460)
chr8 (181-236)||(23399737-23399792)
chr8 (246-324)||(40601914-40601990)
chr8 (246-339)||(2303248-2303339)
chr8 (246-339)||(2327842-2327933)
chr8 (201-302)||(10860831-10860930)
chr8 (246-302)||(4273862-4273916)
chr8 (182-227)||(7727318-7727363)
chr8 (250-342)||(37956274-37956364)
chr8 (201-237)||(12998647-12998683)
chr8 (181-236)||(14907224-14907279)
chr8 (181-236)||(24276517-24276572)
chr8 (181-224)||(33385337-33385380)
chr8 (181-227)||(14846890-14846936)
chr8 (181-235)||(25888686-25888740)
chr8 (45-83)||(40337304-40337342)
chr8 (182-231)||(25961541-25961590)
chr8 (50-82)||(24962224-24962256)
[»] chr6 (31 HSPs)
chr6 (181-339)||(1763904-1764060)
chr6 (181-336)||(30248953-30249105)
chr6 (181-339)||(31945771-31945927)
chr6 (181-341)||(19839022-19839180)
chr6 (181-302)||(34513115-34513233)
chr6 (181-307)||(30465859-30465983)
chr6 (181-340)||(11302946-11303105)
chr6 (189-272)||(3887866-3887949)
chr6 (181-272)||(28238238-28238329)
chr6 (181-302)||(15981885-15982004)
chr6 (181-271)||(9461384-9461474)
chr6 (181-325)||(6791467-6791609)
chr6 (181-273)||(16327214-16327307)
chr6 (181-273)||(16350612-16350705)
chr6 (181-273)||(5895822-5895914)
chr6 (181-237)||(31039237-31039293)
chr6 (181-272)||(33607446-33607535)
chr6 (181-237)||(9941113-9941169)
chr6 (181-274)||(12514501-12514600)
chr6 (181-318)||(31536103-31536239)
chr6 (181-307)||(3729513-3729636)
chr6 (183-237)||(10260564-10260617)
chr6 (181-237)||(12503569-12503628)
chr6 (181-236)||(8644755-8644810)
chr6 (181-235)||(5191246-5191300)
chr6 (50-83)||(5895691-5895724)
chr6 (246-313)||(197334-197399)
chr6 (181-237)||(5457278-5457334)
chr6 (181-217)||(11082162-11082198)
chr6 (181-225)||(16186661-16186705)
chr6 (189-237)||(31780224-31780272)
[»] scaffold1091 (1 HSPs)
scaffold1091 (181-341)||(1769-1927)
[»] chr7 (44 HSPs)
chr7 (181-341)||(19235921-19236081)
chr7 (181-339)||(48767656-48767812)
chr7 (181-339)||(4089359-4089514)
chr7 (181-339)||(1324799-1324954)
chr7 (181-339)||(10685176-10685331)
chr7 (181-330)||(26632937-26633084)
chr7 (181-324)||(35128475-35128617)
chr7 (181-340)||(18121901-18122056)
chr7 (181-330)||(21388333-21388480)
chr7 (189-324)||(29635914-29636047)
chr7 (181-340)||(33181386-33181541)
chr7 (181-237)||(13907701-13907757)
chr7 (181-339)||(21759811-21759967)
chr7 (181-325)||(36726044-36726188)
chr7 (181-339)||(2276437-2276591)
chr7 (181-236)||(21809606-21809661)
chr7 (181-273)||(48610059-48610150)
chr7 (181-237)||(40741043-40741099)
chr7 (181-237)||(42983572-42983628)
chr7 (181-307)||(37673828-37673952)
chr7 (282-339)||(20124362-20124419)
chr7 (181-341)||(49100762-49100924)
chr7 (181-237)||(25750459-25750515)
chr7 (189-273)||(27162825-27162909)
chr7 (181-237)||(28663846-28663902)
chr7 (181-236)||(10408527-10408582)
chr7 (181-236)||(40263802-40263857)
chr7 (181-235)||(39102739-39102793)
chr7 (181-237)||(48193706-48193763)
chr7 (181-237)||(19477167-19477223)
chr7 (181-236)||(35960469-35960525)
chr7 (181-237)||(37136272-37136328)
chr7 (181-237)||(37491577-37491633)
chr7 (181-225)||(46783811-46783855)
chr7 (194-237)||(25829104-25829147)
chr7 (181-236)||(27170102-27170157)
chr7 (181-268)||(28038815-28038902)
chr7 (248-301)||(8318689-8318740)
chr7 (256-325)||(43601040-43601107)
chr7 (181-325)||(29723552-29723693)
chr7 (181-274)||(37048126-37048216)
chr7 (181-214)||(43601146-43601179)
chr7 (181-225)||(26200938-26200982)
chr7 (181-225)||(48832831-48832875)
[»] chr5 (51 HSPs)
chr5 (181-340)||(39690342-39690499)
chr5 (181-330)||(35568871-35569018)
chr5 (15-84)||(27925302-27925371)
chr5 (181-341)||(4738721-4738878)
chr5 (181-340)||(9946214-9946371)
chr5 (183-342)||(21912213-21912370)
chr5 (181-340)||(3558883-3559040)
chr5 (181-339)||(27642593-27642749)
chr5 (181-274)||(29866280-29866373)
chr5 (181-312)||(5151085-5151213)
chr5 (250-341)||(25690508-25690597)
chr5 (181-341)||(25017526-25017687)
chr5 (181-346)||(5845267-5845430)
chr5 (181-274)||(8717879-8717972)
chr5 (181-340)||(36177383-36177541)
chr5 (181-273)||(20946178-20946270)
chr5 (212-339)||(27925395-27925520)
chr5 (181-307)||(36347490-36347614)
chr5 (181-339)||(38971985-38972140)
chr5 (181-270)||(16039-16128)
chr5 (181-342)||(31641044-31641205)
chr5 (181-273)||(7736071-7736163)
chr5 (181-325)||(10523144-10523287)
chr5 (181-237)||(40979169-40979225)
chr5 (181-307)||(36750665-36750789)
chr5 (247-339)||(20975662-20975752)
chr5 (181-236)||(4857452-4857507)
chr5 (246-339)||(7510695-7510786)
chr5 (181-237)||(11980807-11980863)
chr5 (181-237)||(14044455-14044511)
chr5 (181-237)||(21574838-21574894)
chr5 (181-340)||(32401312-32401467)
chr5 (181-340)||(34877757-34877914)
chr5 (181-237)||(42644435-42644491)
chr5 (181-236)||(30348036-30348090)
chr5 (206-339)||(15966942-15967071)
chr5 (181-324)||(129699-129837)
chr5 (181-237)||(3247231-3247287)
chr5 (181-269)||(10656681-10656768)
chr5 (183-231)||(27798249-27798297)
chr5 (189-237)||(29874257-29874305)
chr5 (250-340)||(12895036-12895123)
chr5 (181-227)||(30317840-30317886)
chr5 (181-234)||(32068077-32068131)
chr5 (181-266)||(16969465-16969550)
chr5 (181-273)||(18729683-18729776)
chr5 (259-324)||(43060087-43060151)
chr5 (181-237)||(600856-600912)
chr5 (181-237)||(12895166-12895222)
chr5 (196-236)||(25690644-25690684)
chr5 (181-237)||(43454073-43454129)
[»] chr2 (52 HSPs)
chr2 (181-340)||(534556-534713)
chr2 (181-339)||(17663715-17663871)
chr2 (181-339)||(20362073-20362229)
chr2 (181-339)||(41865806-41865962)
chr2 (181-339)||(28733914-28734070)
chr2 (181-324)||(44424686-44424825)
chr2 (181-339)||(27297668-27297824)
chr2 (203-324)||(27749580-27749699)
chr2 (181-340)||(3237814-3237963)
chr2 (181-339)||(24774956-24775112)
chr2 (181-339)||(28264811-28264965)
chr2 (181-336)||(15851622-15851775)
chr2 (181-324)||(7278486-7278627)
chr2 (181-324)||(31644316-31644456)
chr2 (181-342)||(247751-247910)
chr2 (183-340)||(8064930-8065084)
chr2 (181-271)||(13534496-13534586)
chr2 (181-325)||(37355127-37355270)
chr2 (181-341)||(41665801-41665957)
chr2 (181-339)||(40345934-40346095)
chr2 (181-339)||(14420767-14420923)
chr2 (181-339)||(23464774-23464928)
chr2 (181-326)||(2048701-2048844)
chr2 (181-271)||(7255692-7255782)
chr2 (181-237)||(25731144-25731200)
chr2 (181-340)||(34330093-34330248)
chr2 (246-341)||(45150598-45150691)
chr2 (181-236)||(2131848-2131903)
chr2 (181-307)||(9718062-9718186)
chr2 (181-328)||(11071759-11071905)
chr2 (181-274)||(2521221-2521314)
chr2 (181-273)||(44274440-44274533)
chr2 (181-237)||(32677566-32677622)
chr2 (181-339)||(38449572-38449728)
chr2 (250-339)||(41327662-41327749)
chr2 (181-271)||(45214816-45214906)
chr2 (181-273)||(1246334-1246427)
chr2 (184-323)||(17250834-17250972)
chr2 (181-307)||(38981961-38982085)
chr2 (181-324)||(3645414-3645551)
chr2 (181-307)||(4758117-4758241)
chr2 (247-343)||(44421890-44421984)
chr2 (181-237)||(1604272-1604328)
chr2 (181-324)||(2916974-2917115)
chr2 (181-237)||(3326815-3326871)
chr2 (181-237)||(11459244-11459300)
chr2 (181-237)||(35178944-35179000)
chr2 (181-235)||(2654392-2654446)
chr2 (181-217)||(375323-375359)
chr2 (181-237)||(20427180-20427236)
chr2 (181-237)||(21012944-21013000)
chr2 (181-225)||(42250849-42250893)
[»] scaffold0121 (1 HSPs)
scaffold0121 (181-307)||(24150-24274)
[»] scaffold0038 (1 HSPs)
scaffold0038 (181-272)||(38400-38491)
[»] scaffold0009 (1 HSPs)
scaffold0009 (181-342)||(25790-25949)
[»] scaffold0012 (1 HSPs)
scaffold0012 (181-234)||(99778-99831)
[»] scaffold0013 (1 HSPs)
scaffold0013 (181-273)||(49227-49319)
[»] scaffold0005 (1 HSPs)
scaffold0005 (181-273)||(214709-214805)
[»] scaffold0176 (1 HSPs)
scaffold0176 (181-236)||(20105-20160)
[»] scaffold0699 (1 HSPs)
scaffold0699 (181-214)||(7668-7701)
[»] scaffold0182 (2 HSPs)
scaffold0182 (181-214)||(22151-22184)
scaffold0182 (246-340)||(22585-22678)


Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-107; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 181 - 614
Target Start/End: Complemental strand, 51918670 - 51918238
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||||||  |||| |||||| ||||||||| ||        ||||||||||||||||||||||||||||   ||||    
T  51918670 aatttgacttttcatatttcaagacaagttaacagtattaattaagggtatgttgaggaaaaaa-taataaatgcatctagtaatttgaaaagggataat 51918572  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtattagttagactgtacttaccttttagtcgaactttaggtta 380  Q
    ||||| ||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  51918571 tacatttagggacaaaaataaaatcaaatgggtgcttagatataaagacggagggagtatttgttagactttacttaccttttagtcgaactttagatta 51918472  T
Q  381 ttaggtcattttcccctaagaatcgaagagctaattaaaacccctttctannnnnnnnaggataaagaagnnnnnnnncttcatgataatgaagagtgtg 480  Q
    || |||  |||||| |||||||||||||||||||||||||||||||||||        ||||||||||||         |||||||||||| ||||||||    
T  51918471 ttgggttcttttcctctaagaatcgaagagctaattaaaacccctttcta-tttttttaggataaagaagtttttttttttcatgataatgtagagtgtg 51918373  T
Q  481 ttacaagtatttgctactaggactttgttttatgatgattgcaatcttttgctgg-nnnnnnnnntcaacaaacgctatttagtgtatgaggaatgccca 579  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||          ||| ||||||||||| |||||||||||||||||||    
T  51918372 ttacaagtatttgctactaggactatgttttatgatgattgcaatcttttgttggaaaaaaaaaatcagcaaacgctattcagtgtatgaggaatgccca 51918273  T
Q  580 tcactatccaatctcatatcatgatcggcgcacag 614  Q
    |||||||||||||||| ||||| ||| ||||||||    
T  51918272 tcactatccaatctcagatcataatcagcgcacag 51918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 25477316 - 25477458
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||        ||||||||||||||||||||||||||| | |||      
T  25477316 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaataagta-- 25477413  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||    
T  25477414 tacatttagggacaaaaataaaatcaaatgagtgcttagatatag 25477458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 24072858 - 24073016
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  24072858 aatttgacttttcatatttcaagacaagatggtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggt--t 24072955  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    || || || |||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  24072956 tatatttatggacaaaaataaaatcaaatgggtgcttagatatagagacggagggaatatt 24073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 43800899 - 43801055
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||        ||||||||| |||||||||||||||| |  ||  |    
T  43800899 aatttgacttttcatatttcaagacaagttggtagtattaattaggggtatatttaggaaaataataataaatgtatctagtaatttgaaagggggt--t 43800996  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||||||||||||||| |||| || | |||||||||||| |||| ||||||||    
T  43800997 tacatttagggacaaaaataaagtcaaatgggggcttagatatagggacggagggagta 43801055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 37625139 - 37624996
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| ||||  ||||||||||| |||||| | ||||||||||         ||||||||||||||| ||||||||||||| ||      
T  37625139 aatttgacttttcatatttcaagattagttagtagtattaattaagagtatgtttaggaaaaataataataaatgcatctaataatttgaaaagaggt-- 37625042  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||    
T  37625041 ttacatttagggacaaaaataaaatcaaatgagtgcttaaatatag 37624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 54359774 - 54359919
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||||||||| |||||||| |||||||| |||||||| ||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  54359774 aatttaacttttcatatttcaagacaagatagtagtattaattaggtgtatgtttaggaaaaaa-taataaatgcatctagtaatttgaaaagtggt--t 54359870  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagac 329  Q
    ||||| ||  |||||||||||||| || |||||| ||||||||||||||    
T  54359871 tacatttaaagacaaaaataaaattaaatgagtgtttagatatagagac 54359919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 12624787 - 12624943
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||| ||||||||||||||        || |||||||||||||||||||||||||  ||  |    
T  12624787 aatttgactttttgtattttaagacaaattagtaggattaatgaggggtatgtttaggaaaataatagtaaatgcatctagtaatttgaaaaggagt--t 12624884  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| || |||||||||||||||||| || ||||||| |||||| |||| ||||||||    
T  12624885 tacatttaaggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 12624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 52198742 - 52198587
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| || |||||||||||||| |||||||||||||||||||        ||||||||| ||||||||||||||||||  ||  |    
T  52198742 aatttgactttttatatttcaaaacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgtatctagtaatttgaaaaggggt--t 52198645  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||| | ||||||| || ||||||| |||||| |||| ||| ||||    
T  52198644 tacatttagggacaaaact-aaatcaaatgggtgcttacatatagggacggaggaagta 52198587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 33246511 - 33246388
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||        |||||||||||||||||||||||||||   ||  |    
T  33246511 aatttgactttacatatttcaagacaagttagtagtattaattaggagtatgtttag-aaaaaaataataaatgcatctagtaatttgaaaaagagt--t 33246415  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| |||||||||||||||||||||    
T  33246414 tacatttagggacaaaaataaaatcaa 33246388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 22750856 - 22750699
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||        ||||||||||||||| ||||||||||  | | | |    
T  22750856 aatttgacttttcatatttcaagacaacttagtagtattaattaggggtatgtataggaaaataataataaatgcatctactaatttgaaa--aaggatt 22750759  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    || || |||| |||||||||||||||| |  ||| ||| |||||| |||| |||||||||    
T  22750758 tagatttaggaacaaaaataaaatcaaattggtggttacatatagggacggagggagtat 22750699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 52226110 - 52226202
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt-agnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||        |||||||||||||||||||||||||||    
T  52226110 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttaagaaaaataataataaatgcatctagtaatttgaaaa 52226202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 5536613 - 5536717
Alignment:
Q  219 taattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgctta 318  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| || || ||||    
T  5536613 taattaggggtatgtttaggagaaaaataataaatgcatctagtaatttgaaaagaggt--ttacatttagggacaaaaataaaatcaaatgggtactta 5536710  T
Q  319 gatatag 325  Q
    |||||||    
T  5536711 gatatag 5536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 40411357 - 40411201
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||||||||| |||||||| || || || ||||||||||||||||||         ||||||||||||||||||||||||||||  ||  |    
T  40411357 aatttaacttttcatatttcaagacaagataataatattaattaggggtatgtttaagaaaaaaataataaatgcatctagtaatttgaaaaggagt--t 40411260  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||  ||||||||||||||||||||| ||  |||||| |||||  |||| ||||||||    
T  40411259 tacaattagggacaaaaataaaatcaaatggatgcttaaatatatggacggagggagta 40411201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 46729396 - 46729552
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||| |||| |  | ||| ||||||||||||||||| |        ||||||||||||||| |||||| ||||||  |  |    
T  46729396 aatttgacttttcatatttcaaggcaagatgatggtattaattaggggtatgtttgggaaaaaaataataaatgcatctaataatttaaaaagagat--t 46729493  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || ||| |||||||||| |||| ||||||||    
T  46729494 tacatttagggacaaaaataaaatcaaatgggtgtttagatatagggacggagggagta 46729552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 21171815 - 21171969
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||        ||||||||| || |||||||||||||||| ||  |    
T  21171815 aatttgactttacatatttcaagataagttagtagtattaattaggggtatgtttag-aaaaaaataataaatgtatatagtaatttgaaaagaagt--t 21171911  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagt 338  Q
    ||||| ||| |||| |||||||||||| |  ||| ||| |||||| |||| |||||||    
T  21171912 tacatttagagacataaataaaatcaaataggtggttacatatagggacggagggagt 21171969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 39237603 - 39237444
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||||||| || || || |||||||||||||||||||        |||||||| |||||||||||||||||| | ||  |    
T  39237603 aatttgactttttatatttcaagacaagataatattattaattaggggtatgtttaggaaaaaaataataaatacatctagtaatttgaaaaaaggt-tt 39237505  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    || || ||| |||| |||||||||||| ||| |||||||||| |  |||| ||||||||||    
T  39237504 tatatttagagacagaaataaaatcaaatgaatgcttagatacatggacggagggagtatt 39237444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 41945787 - 41945666
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| ||||| || ||| |||| ||||||||||        |||||||||||| |||||||||||||||  | | |    
T  41945787 aatttgacttttcatatttcaagacaagatagtaatattaagtaggagtatgtttaggaaaaaaataataaatgcatatagtaatttgaaaag--ggatt 41945690  T
Q  281 tacatctagggacaaaaataaaat 304  Q
    ||||| ||||||||||||||||||    
T  41945689 tacatttagggacaaaaataaaat 41945666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 54438601 - 54438757
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| || ||||| |||||||| ||||||| || ||||||||         |||||||||| |||| |||||||||||||  |      
T  54438601 aatttgacttttcatatttcaaaacaagatagtagtattaattagaggcatgtttaggaaaaaaaataataaatgc-tctactaatttgaaaagagat-- 54438697  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||| |||||||||||||||||| || ||  |||||||||||||||||| ||||||||    
T  54438698 ttacatttagggacaaaaataaaataaaatggatgcttagatatagagacggagggagta 54438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 22651555 - 22651711
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| | | ||| ||||||||||| || || |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  22651555 aatttgactttacgtgtttcaagacaagttattaatattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggagt--t 22651652  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| || ||| |||||||||||||| || ||| ||| |||||  || ||||||||||    
T  22651653 tacatttaaggataaaaataaaatcaaatgggtgattacatataaggatgaagggagta 22651711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 34543861 - 34543952
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||||||||||||||||||||||| ||  |||||  |||| ||||||| |||||||| || ||||||| |||||| |||||||||||||    
T  34543861 taataaatgcatctagtaatttgaaaagaagt--ttacaattaggaacaaaaagaaaatcaaatgggtgcttatatatagggacgaagggagta 34543952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 51787862 - 51788017
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||  || ||||| ||||||||| |||||||||        ||||||||| |||||||||||| |||||  ||  |    
T  51787862 aatttgacttttcatatttcaagacaaaataatagtattaattagggatatgtttaggaaaaaa-taataaatgtatctagtaatttaaaaaggagt--t 51787958  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || || |||||||||||||||||| ||  | |||||||||||||||||| ||||||    
T  51787959 tatatttaaggacaaaaataaaatcaaatggatacttagatatagagacgaatggagta 51788017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 20116541 - 20116699
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtact-aattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| |||||||| || ||||| | ||||||||||||||||||         |||||||||||||||||||||||||||  ||      
T  20116541 aatttgatttttcatatttcaagacaagataatagtattaaattaggggtatgtttagacaaaaataaataaatgcatctagtaatttgaaaaggggt-- 20116638  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||| ||  ||||||||| | ||||||||  | |||||||||||||| |||| |||||||||    
T  20116639 ttatattaagggacaaagacaaaatcaaacgggtgcttagatatagggacggagggagtat 20116699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 38136446 - 38136599
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||| ||         || ||||| ||||||||||||||||||  ||  |    
T  38136446 aatttgatttttcatatttcaaggcaagttagtagtattaattaggggtatgttcaggaaa-----aaaaaatgtatctagtaatttgaaaaggagt--t 38136538  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| || ||| ||||||||| |||| ||  |||||| ||||||||||| ||||||||||    
T  38136539 tacatttatggataaaaataaagtcaaatggatgcttaaatatagagacggagggagtatt 38136599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 39414325 - 39414417
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||        |||||||||  |||||||||||||||||    
T  39414325 aatttgacttttcatatttcaagataagttagtggtattaattaggggtatgtttaggaaaaaaataataaatgtgtctagtaatttgaaaag 39414417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 323
Target Start/End: Complemental strand, 39197048 - 39196907
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag-nnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    |||||||||||||| |||| || ||||||||||| || |||||||| |||| |||||         ||||||||||||||||||||||||||| ||  |     
T  39197048 aatttgacttttcaaattttaaaacaagttagtattattaattaggtgtatatttagaaaaaaaaataataaatgcatctagtaatttgaaaa-at-aat 39196951  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatat 323  Q
    |||||| |||||||||||||||| |||| || ||||||||||||    
T  39196950 ttacatttagggacaaaaataaagtcaaatgggtgcttagatat 39196907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 41920052 - 41919997
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  41920052 aatttgacttttcatatttcaagataagttagtagtattaattaggggtatgttta 41919997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 52552525 - 52552470
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  52552525 aatttgacttttcatatttcaagataagttagtagtattaattaggggtatgttta 52552470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 54701243 - 54701167
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||||||| ||||||||||||||||||| ||  |||||| || ||||||||||||| |||| ||||||||||||||||    
T  54701243 taataaatgtatctagtaatttgaaaagaggt--ttacatttatggacaaaaataaagtcaaatgagtgcttagatata 54701167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 30153236 - 30153078
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||        ||||||||||||||| ||||||  ||| ||| | |    
T  30153236 aatttgacttttcatatttcaagacaagttagtagtattaatta-gagtatgtttag-gaaaaaataataaatgcatctaataattt--aaaaatggatt 30153141  T
Q  281 tacatctagggacaaaaataaaatcaagt-gagtgcttagatatagagacgaagggagtatta 342  Q
    ||||| ||| |||||||||||| |||| | | | |||||||||||  |||| |||||||||||    
T  30153140 tacatttagagacaaaaataaagtcaaatagggggcttagatataaggacggagggagtatta 30153078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 31917468 - 31917622
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||| ||| |||||||| |||||| ||||||||||||        | |||||||||||||||||||||||||   ||  |    
T  31917468 aatttgactttttatattttaagataagatagtagtattaatta-gggtatgtttag-gaaaaaatcataaatgcatctagtaatttgaaaaagggt--t 31917563  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| || ||| |||||||||||||| |||||||||| |||||  |||| ||||||||    
T  31917564 tacatttaaggataaaaataaaatcaaatgagtgcttaaatataaggacggagggagta 31917622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 340
Target Start/End: Original strand, 5168078 - 5168227
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatcta 288  Q
    ||||||||||| || ||||| |||||||| |||||| ||||||||||||         || |||||||||||||||| ||||||   ||  |||||| ||    
T  5168078 ttttcatatttcaatacaagctagtagtattaattaagggtatgtttagaaaaaaaaaaaaaaatgcatctagtaatatgaaaacgggt--ttacattta 5168175  T
Q  289 gggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    | ||||||||||||||||| |  |||||||||||||| |||| ||| |||||    
T  5168176 gagacaaaaataaaatcaaattggtgcttagatatagggacggaggaagtat 5168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 10602224 - 10602083
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || |||| ||||||||| |||||| | ||||||||||        |||| ||||||||||||||||| |||||  ||  |    
T  10602224 aatttgacttttcatatttcaaaacaaattagtagtattaattaagagtatgtttaggaaaaaaataatgaatgcatctagtaatttaaaaaggagt--t 10602127  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| || ||||||||||||| | || || |||||||| ||||    
T  10602126 tacatttatggacaaaaataaagtaaaatgggtgcttagttata 10602083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 16070522 - 16070679
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||| |||| |        |||||||| ||||||||||||| ||| |  ||  |    
T  16070522 aatttgacttttcatatttcaatacaagttagtagtattaattaggggtacgttttgggaaaaaataataaatacatctagtaatttaaaatggggt--t 16070619  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||||| |||||| |||| || ||   |||||||||||| |||| | |||||||    
T  16070620 tacatttagggataaaaattaaattaaatggaggcttagatatagggacggaaggagtat 16070679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 43509172 - 43509297
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt-agnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||| |||||||| |||| ||||||| ||||||||| ||||||||||||| ||| ||        ||||||||||||||| ||||||||||||  ||      
T  43509172 aatttaacttttcaaatttcaagacaaattagtagtattaattaggggtatctttaagaaaaaaaataataaatgcatctaataatttgaaaaggagt-- 43509269  T
Q  280 ttacatctagggacaaaaataaaatcaa 307  Q
    |||||| |||||||||||||||| ||||    
T  43509270 ttacatttagggacaaaaataaagtcaa 43509297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 20185670 - 20185615
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  20185670 aatttgacttttcatatttcaagacaaattagtagtattaattaagggtatgttta 20185615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 20293838 - 20293998
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||| ||||||||| || |||||||||||||| ||| || ||||||||||| |        ||||||||||||||| ||||||||||  |||       
T  20293838 aatttgactattcatatttcaatacaagttagtagtattaagtaagggtatgtttaggaaaaaaaataataaatgcatctaataatttgaaa--atgagt 20293935  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    | |||| || | | |||||||||||||| ||  ||||||||||||| |||||| |||||||||    
T  20293936 tcacatttatgaaaaaaaataaaatcaaatggatgcttagatatagggacgaaaggagtatta 20293998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 20291431 - 20291523
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||| |||| |||||||||||| |||||| || |||||||||        |||||||| ||| ||||||||||||||||    
T  20291431 aatttgacttttcatatttcaagataagttagtagtattaatta-ggatatgtttaggaaaaaagtaataaatacatttagtaatttgaaaaga 20291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 5933043 - 5933124
Alignment:
Q  247 aataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||| ||||||||||||||||||||||  |  ||| || |||||||||||||||| |||| ||| ||||||||||| ||||||    
T  5933043 aataattgcatctagtaatttgaaaagaaat--ttatatttagggacaaaaataaagtcaaatgaatgcttagatattgagacg 5933124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 7002274 - 7002366
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||| ||||||||||| |||| ||||||| |||| |||||| ||||||||||||        |||||||| ||||||||||||||||||||    
T  7002274 aatttgatttttcatatttcaagataagttagcagtattaattaagggtatgtttag-gaaaaaataataaatacatctagtaatttgaaaaga 7002366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 21121058 - 21121114
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||| |||||| |||||| ||||||||||||||||| |||||||||||| ||||||    
T  21121058 aatttaactttttatattttaagacaagttagtagtattaattaggggtacgtttag 21121114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 28115151 - 28115099
Alignment:
Q  287 tagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||||||||||||| | || |||||||||||||||||||||| ||||||||    
T  28115151 tagggacaaaaataaagttaaatgagtgcttagatatagagacggagggagta 28115099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 31552259 - 31552315
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  31552259 aatttgatttttcatattttaagacaaatgagtagtattaattaggggtatgtttag 31552315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 31937043 - 31936950
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||||||||||||||||||||||||||  | | |||||| |||||||||||||||| | || |   ||||||||||||| |||| ||| ||||||    
T  31937043 taataaatgcatctagtaatttgaaaag--ggatttacatttagggacaaaaataaagttaaatagatgcttagatatagggacggaggaagtatt 31936950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 44812621 - 44812480
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || ||||  |||||||| ||||||||||||| |||||        |||||||||||| || || ||| |||||  | | |    
T  44812621 aatttgacttttcatatttcaaaacaaaatagtagtattaattaggggtatctttaggaaaaaaataataaatgcatataatactttaaaaag--ggatt 44812524  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    | ||  || |||||||||||||||||| ||| ||||||||||||    
T  44812523 ttcaattatggacaaaaataaaatcaaatgaatgcttagatata 44812480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 13096550 - 13096463
Alignment:
Q  187 acttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||| ||||||||||| ||||| |||||| ||||||||||| |        ||||||||| ||||||||||||||||||    
T  13096550 acttttcatattttaagacaagttactagtattaattaagggtatgtttaggaaaaataataataaatgtatctagtaatttgaaaag 13096463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 20262408 - 20262353
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| || ||||| |||||||| |||||| |||||||||||    
T  20262408 aatttgacttttcatatttcaaaacaagatagtagtattaattaagggtatgttta 20262353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 5448753 - 5448807
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt 235  Q
    ||||||||||||||||||| |||| | |||||||||| |||||| ||||||||||    
T  5448753 aatttgacttttcatatttcaagatatgttagtagtattaattatgggtatgttt 5448807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 14602669 - 14602573
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtag--tactaattaggggtatgtttag--nnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    |||||||||||| |||||| |||| ||||||||||  || |||||||||||||||||||          ||||||||||||||||||||||||||||    
T  14602669 aatttgactttttatattttaagataagttagtagtatattaattaggggtatgtttagaaaaaatatataataaatgcatctagtaatttgaaaag 14602573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 31840187 - 31840342
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||| ||||| |||||| ||||||  ||| ||||| ||||||||| |||||||||        | ||||||||||||| ||||||||||||  ||  |    
T  31840187 aatttgtctttttatatttcaagacagattaatagtattaattagggatatgtttagaaaaata-tgataaatgcatctaataatttgaaaaggggt--t 31840283  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || |||||||||||||||| |||| ||| |||||||| |||| |||| || |||||    
T  31840284 tatatttagggacaaaaataaagtcaaatgaatgcttagaaatagggacggagtgagta 31840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 41459678 - 41459724
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    ||||||||||||||||||| | ||||||||||||||| |||||||||    
T  41459678 aatttgacttttcatatttcatgacaagttagtagtattaattaggg 41459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 48472509 - 48472371
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||||||| || ||||| |||||||||||||| ||||        ||||||| |||| || ||||||||||| | ||  |    
T  48472509 aatttgactttttatatttcaagacaagataatagtattaattaggggtatg-ttaggaaaaaaataataaaagcatttattaatttgaaaaaaagt--t 48472413  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagata 322  Q
    ||||| ||  ||||||||||||||||| || ||| |||||||    
T  48472412 tacatttaaagacaaaaataaaatcaaatgggtgtttagata 48472371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 48609534 - 48609445
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaa 270  Q
    ||||||||||||||||||| || || ||||||||||| ||||||| ||||| ||||         |||||||| ||||||||||||||||    
T  48609534 aatttgacttttcatatttcaaaactagttagtagtattaattagaggtatatttaagaaaaaaataataaatacatctagtaatttgaa 48609445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 341
Target Start/End: Original strand, 50782928 - 50783020
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||||||||||||||||| || |||||  || ||   || |||| |||||||||||||||| || |||||||||||||| |||| ||| ||||||    
T  50782928 taataaatgcatctagtaacttaaaaaggggttat---atttaggaacaaaaataaaatcaaatgggtgcttagatatagggacggaggaagtatt 50783020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 726695 - 726751
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| ||||||| | || ||||||||||||| |||||    
T  726695 aatttgacttttcatatttcaagataagttagcaatattaattaggggtatatttag 726751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 754149 - 754093
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| ||||||| | || ||||||||||||| |||||    
T  754149 aatttgacttttcatatttcaagataagttagcaatattaattaggggtatatttag 754093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 26203221 - 26203277
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||| ||||| ||||||||||||||  | |||||||||| ||||||||    
T  26203221 aatttgacttttcgtatttcaagacaagttagtatgattaattaggggaatgtttag 26203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 32236922 - 32236978
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| || | || |||||| || |||||||||||||||||||    
T  32236922 aatttgacttttcatatttcaatataaattagtaatattaattaggggtatgtttag 32236978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 56217067 - 56217011
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||| ||||||||||||| |||| ||| |||||||| ||||||| |||||||||||    
T  56217067 aatttaacttttcatatttcaagataagatagtagtattaattagaggtatgtttag 56217011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 20792147 - 20792235
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggga 336  Q
    ||||||||| |||||||||||| ||||||  |  |||||| ||||  ||||||||||||||| || ||| |||||||||| |||| |||||    
T  20792147 taataaatgtatctagtaatttaaaaagagat--ttacatttaggatcaaaaataaaatcaaatgggtgtttagatatagggacggaggga 20792235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 19654526 - 19654575
Alignment:
Q  188 cttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| || |||||||||||||| || ||||| ||||||||||    
T  19654526 cttttcatatttcaaaacaagttagtagtattagttaggagtatgtttag 19654575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 56373350 - 56373269
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||| ||||||        ||||||||||||| ||||||||||||    
T  56373350 ttttcatatttcaagacaagttattagtattaattaagggtacgtttag-gaaaaaataataaatgcatccagtaatttgaaa 56373269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 10541271 - 10541215
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||| | |||| | |||||||||| ||||||||| |||||||||    
T  10541271 aatttgactttttatatgtcaagatatgttagtagtattaattagggatatgtttag 10541215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 56216713 - 56216685
Alignment:
Q  246 taataaatgcatctagtaatttgaaaaga 274  Q
    |||||||||||||||||||||||||||||    
T  56216713 taataaatgcatctagtaatttgaaaaga 56216685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 20945316 - 20945158
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||        ||| ||||||||||||||||||||||||  ||  |    
T  20945316 aatttgacttttcatattttaagacaagttagtagtattaattagggttatgtttaggaaaataataacaaatgcatctagtaatttgaaaaggggt--t 20945219  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| |||||||||||||||| |||| || |||||||||||||| |||||||||||||||    
T  20945218 tacatttagggacaaaaataaagtcaaatgggtgcttagatatagggacgaagggagtatt 20945158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 26517231 - 26517074
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttg-aaaagatgtaa 279  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||| |||||| ||      
T  26517231 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggcaaaaaataataaatgcatctagtaatttgtaaaaga-gt-- 26517135  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    |||||| ||||||||||||||||||||| || |||||||||||||  |||| |||||||||    
T  26517134 ttacatttagggacaaaaataaaatcaaatgggtgcttagatatatggacggagggagtat 26517074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 46048612 - 46048769
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattagggg-tatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||||||| |||||||  |||||||||| |||||||||        ||||||||||||||| ||||||||||||  ||      
T  46048612 aatttgacttttcatatttcaagacaagatagtagtgttaattagggggtatgtttagaaaaaaaataataaatgcatctattaatttgaaaaggggt-- 46048709  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  46048710 ttacatttagggacaaaaataaaatcaaatgagtgcttagatatagggacgaatggagta 46048769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 29676755 - 29676599
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||| | |||||||||| |||||||| |||| ||| |||||||||||||||||||        |||||||||||| ||||||||||||| || ||  |    
T  29676755 aatttggcatttcatatttcaagacaagatagtggtattaattaggggtatgtttagggaaaaa-taataaatgcat-tagtaatttgaaatgaggt--t 29676660  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  29676659 tacatttagggacaaaaataaaatcaaatgagtgcttagatatagggacggagggagtatt 29676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 31531144 - 31530988
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||| |||||||| |||| ||||||||||||||||| |||||||||||||||||||         ||||||||||||||||||||||||||||  ||      
T  31531144 aatttaacttttcaaatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaataataataaatgcatctagtaatttgaaaaggagt-- 31531047  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||| ||||||| |||||||| |||| || |||||||||||||| |||| ||||||||    
T  31531046 ttacatttagggac-aaaataaagtcaaatgggtgcttagatatagggacggagggagta 31530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 44083717 - 44083873
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| ||||||||  || |||||||||||||||||||        ||||||||| |||||||||||||||||   ||  |    
T  44083717 aatttgacttttcatatttcaagataagttagtgatattaattaggggtatgtttagggaaaaaataataaatggatctagtaatttgaaaatgggt--t 44083814  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||||||||||||||| |||| ||  ||||||||||||| |||| ||||||||    
T  44083815 tacatttagggacaaaaataaagtcaaatggatgcttagatatagggacggagggagta 44083873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 12077759 - 12077601
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn--taataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| || ||||| ||| |||| |||||||||||||||||||          ||||||||||||||||||||||||||||  ||     
T  12077759 aatttgacttttcatatttcaaaacaagatagaagtattaattaggggtatgtttaggaaaaaaaattaataaatgcatctagtaatttgaaaaggggt- 12077661  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
     |||||| || |||||||||||||||||| |||||| |||||||||| |||| | ||||||    
T  12077660 -ttacatttaaggacaaaaataaaatcaaatgagtgattagatatagggacggaaggagta 12077601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 31819496 - 31819655
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||        ||||||||||||||||||||||||||  ||    |    
T  31819496 aatttgacttttcatatttcaagacaatatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaa--attgggt 31819593  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    || || ||||||||||||||||||||| |  |||||||||||||| ||   |||||||||||    
T  31819594 tatatttagggacaaaaataaaatcaaataggtgcttagatatagggatagagggagtatta 31819655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 29349468 - 29349625
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||||         |||| |||||||||||||||||||||  |||   |    
T  29349468 aatttgacttttcatatttcaagataagttagtagtattaattagaggtatgtttaagaaaaaaataattaatgcatctagtaatttgaaa--atgagtt 29349565  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||| ||||||||||| |||| |||||| ||||||||||  ||| |||||||||    
T  29349566 tacatttaggaacaaaaataaagtcaaatgagtgtttagatataggaacggagggagtat 29349625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 41308792 - 41308702
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||    
T  41308792 aatttggcttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaa 41308702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 42891509 - 42891664
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||        ||||||||||||||||||||||||| ||  ||  |    
T  42891509 aatttgacttttcaaatttaaagacaagttagtggtattaattaggggtatgtttag-gaaaaaataataaatgcatctagtaatttgaagaggggt--t 42891605  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||||||||||||||| |||| || ||| |||  ||||| |||| ||||||||    
T  42891606 tacatttagggacaaaaataaagtcaaatgggtgtttacgtatagggacggagggagta 42891664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 337
Target Start/End: Original strand, 28477475 - 28477628
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||          ||||||||||||||||||||||||||||| ||  |    
T  28477475 aatttgactattcatatttcaagacaaattagtagtattaattaggggtatatttt-agaaaaaataataaatgcatctagtaatttgaaaagaggt--t 28477571  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggag 337  Q
    ||||| ||||| |||||||||| |||| ||   |||||||||||| |||| ||||||    
T  28477572 tacatttaggggcaaaaataaagtcaaatggaggcttagatatagggacggagggag 28477628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 14645905 - 14645764
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| |||||| |||| ||||||||||||||||| ||| |||||||||||||||        |||||||||||| ||||||||| |||||  ||  |    
T  14645905 aatttgatttttcaaatttcaagacaagttagtagtattaactaggggtatgtttagaaaaaaaataataaatgcatatagtaatttaaaaaggggt--t 14645808  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| || | ||||||||||| |||| || |||||||||||||    
T  14645807 tacatttaagaacaaaaataaagtcaaatgggtgcttagatata 14645764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 30476131 - 30476219
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttga 269  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  30476131 aatttgacttttcatatttcaagagaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttga 30476219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 35145321 - 35145477
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||||||  | ||| || ||||||||| |||||||||         ||||||||||||||||||||||||||||| ||      
T  35145321 aatttgacttttcatatttcaagacaaaatggtaatattaattagggatatgtttaggaaaaaaaataataaatgcatctagtaatttgaaaaga-gt-- 35145417  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||| || ||||||||||||||||||||| ||  |||||| |||||| |||| ||||||||    
T  35145418 ttatatttagggacaaaaataaaatcaaatggttgcttatatatagggacggagggagta 35145477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 50363117 - 50363173
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  50363117 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttag 50363173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 50524992 - 50524851
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| | |||| ||||||||||||||||  |||||||||||||||||||        |||||||||||||| ||||||||||||   ||  |    
T  50524992 aatttgacttttgaaatttcaagacaagttagtagttttaattaggggtatgtttaggaaaaaaataataaatgcatcttgtaatttgaaaaagggt--t 50524895  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    || || || ||||||||||||| |||| || |||||||||||||    
T  50524894 tagatttaaggacaaaaataaagtcaaatgggtgcttagatata 50524851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 5504591 - 5504500
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||        |||||||||||| ||||||||| ||||    
T  5504591 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatatagtaatttaaaaa 5504500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 11388211 - 11388304
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtag--tactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| |||| ||||||||||  || |||||||||||||||||||        |||||||||||||||||||||||||||    
T  11388211 aatttgacttttcatatttcaagataagttagtagtatattaattaggggtatgtttagaaaaaaaataataaatgcatctagtaatttgaaaa 11388304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 29645479 - 29645570
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||||||||||||||||||||||  ||  |||||| ||||||||||||||||||||| | | ||||||||||||  |||| ||||||||    
T  29645479 taataaatgcatctagtaatttgaaaagtggt--ttacatttagggacaaaaataaaatcaaataaatgcttagatataaggacggagggagta 29645570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 26043109 - 26043247
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||        |||||||||| |||||||||||||||||  ||  |    
T  26043109 aatttgacttttcatatttcaagataa-ttagtagtattaattaggg-tatgtttaggaaaaaaataataaatgcgtctagtaatttgaaaaggagt--t 26043204  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| ||||||| |||||||| |||| || |||||||||||||    
T  26043205 tacatttagggac-aaaataaagtcaaatgggtgcttagatata 26043247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 48309534 - 48309590
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  48309534 aatttgacttttcatatttcaagataagttagtagtattaattaggggtatgtttag 48309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 3475606 - 3475698
Alignment:
Q  247 aataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    |||||||||||||||||| || |||||| ||  ||| || ||||||||||||||||||||| || ||||||||||||||| ||| |||| |||||    
T  3475606 aataaatgcatctagtaagttaaaaagaggt--ttatatttagggacaaaaataaaatcaaatgggtgcttagatatagaaacggagggggtatt 3475698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 11345477 - 11345569
Alignment:
Q  248 ataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    |||||| |||||||||||||||||||  ||  ||| || ||||| ||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  11345477 ataaatacatctagtaatttgaaaaggggt--ttaaatttaggggcaaaaataaaatcaaatgggtgcttagatatagggacggagggagtatta 11345569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 13084374 - 13084223
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| || |||||||||||| | ||||||||| |||||||||        ||||||||||||||||||||||||||||  ||  |    
T  13084374 aatttgacttttcaaattttaacacaagttagtagcattaattagggatatgtttag--gaaaaataataaatgcatctagtaatttgaaaaggagt--t 13084279  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggga 336  Q
    ||| | || ||| |||||||||||||| ||  || |||||||||| |||| |||||    
T  13084278 tacgtttaaggataaaaataaaatcaattggatgtttagatatagggacggaggga 13084223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 21933016 - 21933107
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| |||| ||||||   ||| |||||||||||||||||||        |||||||||||||||||||||||||||    
T  21933016 aatttgacttttcatatttcaagataagttaaccgtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaa 21933107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 330
Target Start/End: Original strand, 40645772 - 40645909
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatcta 288  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||        ||||||||||||||| |||||||||| || ||  ||| || ||    
T  40645772 ttttcatatttcaagacaagttattagtattaattaggggtatgtttag--gaaaaataataaatgcatctaataatttgaaaggaggt--ttatattta 40645867  T
Q  289 gggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    |||| ||||||||| ||||  ||  |||||||||||| ||||    
T  40645868 gggataaaaataaagtcaaacgaaggcttagatatagggacg 40645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 41727254 - 41727112
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| ||||  || ||||||||||||||||||         |||||||||||| ||||||||| |||||  ||  |    
T  41727254 aatttgacttttcatatttcaagacaagatagtgatattaattaggggtatgtttaagaaaaaaataataaatgcatttagtaatttaaaaaggggt--t 41727157  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| || | |||||| ||||||||| |||||| ||| ||||||    
T  41727156 tacatttaagaacaaaagtaaaatcaaatgagtgtttacatatag 41727112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 28229255 - 28229311
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||    
T  28229255 aatttgacttttaatattttaagacaagttagtagtattaattatgggtatgtttag 28229311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 35055876 - 35055968
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    |||||||||||| |||||| || |||||||||||||| |||||| ||||||||||||        ||||||||||||||| |||||||||||||    
T  35055876 aatttgactttttatatttcaatacaagttagtagtattaattatgggtatgtttag-gataaaataataaatgcatctaataatttgaaaaga 35055968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 11396811 - 11396905
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtag--tactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||| ||||||||||  || |||||||| ||||||||||        ||||||||||||||| ||||||||||||    
T  11396811 aatttgacttttcatatttcaagataagttagtagtatattaattaggtgtatgtttaggaaaaaaataataaatgcatctaataatttgaaaag 11396905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 39617266 - 39617121
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||  ||||||| ||||||||| ||| ||||         ||||||||||||||| | |||| |||| | ||  |    
T  39617266 aatttgacttttcatatttcaagacaag--agtagtattaattagggatatatttaagaaaaaaataataaatgcatctaatcatttaaaaaaaggt--t 39617171  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||| ||| |||||||||||||| || ||| |||||||||||| |||||    
T  39617170 tacatttagtgacaaaaataaaatgaaatgaatgcttagatataaagacg 39617121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 27638093 - 27638037
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||| |||||||||| |||||||| |||| ||| |||||||||||||||||||    
T  27638093 aatttgacatttcatatttcaagacaagatagtggtattaattaggggtatgtttag 27638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 30476221 - 30476273
Alignment:
Q  289 gggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||||||||    
T  30476221 gggacaaaaataaaatcaaatgggtgcttagatatagggacggagggagtatt 30476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 33287956 - 33288012
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||  ||||||||||    
T  33287956 aatttgactttttatatttcaagacaagttagtagtattaattagatgtatgtttag 33288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 44338171 - 44338227
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||| |||| ||||||||| || |||||||||||||||||||    
T  44338171 aatttgactttttatatttcaagataagttagtactattaattaggggtatgtttag 44338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 48581408 - 48581464
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  48581408 aatttgatttttcatatttccagacaagttaatagtactaattagaggtatgtttag 48581464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 25750673 - 25750765
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaa-taaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||| |||||||||||||||||   ||  |||||| || ||||||||| |||| ||||||| ||||||||||||| ||||| ||||||||    
T  25750673 taataaatgtatctagtaatttgaaaaagagt--ttacatttaaggacaaaaaataaagtcaagtgggtgcttagatataaagacggagggagta 25750765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 41739989 - 41739898
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||| ||||||||||| |||| ||||||| |||| |||||| ||||||||||||        ||||||||| | |||||||||||||||    
T  41739989 aatttgaattttcatatttcaagataagttagcagtattaattaagggtatgtttaggaaaaaaataataaatgtacctagtaatttgaaaa 41739898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 11140851 - 11140910
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaa 307  Q
    ||||||||||||||||||||||||||||| ||  ||||||  ||||| ||||||||||||||    
T  11140851 taataaatgcatctagtaatttgaaaagaggt--ttacattcagggataaaaataaaatcaa 11140910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 831376 - 831284
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||| ||||||||||| || | |||||| ||||| |||||||| ||||||||||        |||||||||||||||||| ||| |||||    
T  831376 aatttgatttttcatatttcaatataagttattagtattaattaggagtatgtttaggaaaataataataaatgcatctagtagtttaaaaag 831284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 2421174 - 2421230
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||  ||||||||||||||||| || |||| |||||||||||    
T  2421174 aatttgactttttatattcaaagacaagttagtagtattagttagaggtatgtttag 2421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 31474522 - 31474570
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  31474522 ttttcaaattttaagacaaattagtagtattaattaggggtatgtttag 31474570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 35765660 - 35765604
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||||| |||| || |||||||||||||| ||||||  |||||||||||    
T  35765660 aatttgacttttcaaatttcaaaacaagttagtagtattaattataggtatgtttag 35765604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 42010958 - 42011014
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| || |||| |||| |||||| ||||||||||||    
T  42010958 aatttgacttttcatatttcaagataaattagcagtattaattatgggtatgtttag 42011014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 44698536 - 44698396
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| || ||||||||| |||||| |   |||||||         ||||||||| |||| ||||||||||||   ||  |    
T  44698536 aatttgacttttcatattttaagataaattagtagtattaattatgaaaatgttta-agaaaaaataataaatgtatcttgtaatttgaaaatgggt--t 44698440  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    |||||||| ||||||||||||| |||| |||||| |||||||||    
T  44698439 tacatctaaggacaaaaataaagtcaaatgagtgattagatata 44698396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 51263172 - 51263329
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt-agnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||   |||||||| |         ||| |||| |||||||||||||||||  ||| |     
T  51263172 aatttgacttttcatatttaaagataagttagtagtattaattaaaagtatgtttaaaaaaaaaattaacaaatacatctagtaatttgaaa--atgaat 51263269  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||| || |||| ||||| ||||||||||  | ||||||| ||||||| |||||| |||||    
T  51263270 ttatatttaggaacaaatataaaatcaaacgggtgcttaaatatagatacgaagtgagta 51263329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 26999198 - 26999289
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||||||||| |||||| |||||  ||  |||||| |  |||||||||||||||||| ||  || ||||||||||||||| | ||||||    
T  26999198 taataaatgcatctaataatttaaaaaggggt--ttacatttgaggacaaaaataaaatcaaatggatgtttagatatagagacggatggagta 26999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 41825153 - 41825107
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    |||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  41825153 aatttgacatttcatattttaagacaagttagtagtattaactaggg 41825107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 14754755 - 14754703
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgt 233  Q
    ||||||||||||||||||| || |||||||  |||||||||| |||| |||||    
T  14754755 aatttgacttttcatattttaatacaagttgatagtactaatcagggatatgt 14754703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 31650654 - 31650610
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    ||||||||||||||||| | |||| |||||||||||| |||||||    
T  31650654 aatttgacttttcatatcttaagataagttagtagtattaattag 31650610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 34055816 - 34055727
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggag 337  Q
    ||||||||  |||||||||||| |||||  |||  ||||| ||| || |||||||||||||| |  ||||||||||||| ||||| ||||||    
T  34055816 taataaatatatctagtaatttaaaaaggggta--tacatttagagaaaaaaataaaatcaaataggtgcttagatataaagacgcagggag 34055727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 48903099 - 48903043
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||| |||| || ||||||||| |||||| ||||| ||||||    
T  48903099 aatttgacttttaatatttcaagaaaaattagtagtattaattaagggtaggtttag 48903043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 5085102 - 5084946
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  5085102 aatttgacttttcatatttcaagagaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggt--t 5085005  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || |||||||||||||| |||| ||||||||    
T  5085004 tacatttagggacaaaaataaaatcaaatgggtgcttagatatagggacggagggagta 5084946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 15512794 - 15512637
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  15512794 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 15512697  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| |||||||||    
T  15512696 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtat 15512637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 28948977 - 28948820
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  28948977 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 28948880  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| |||||||||    
T  28948879 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtat 28948820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 48721881 - 48721735
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||| |   |    
T  48721881 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttag-gaaaaaataataaatgcatctagtaatttgaaaagagg--gt 48721785  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||| ||||||||||||||||||||| |  ||| |||||||||| ||||    
T  48721784 tacatttagggacaaaaataaaatcaaataggtgtttagatatagggacg 48721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 3831137 - 3831294
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||| |||||||||        ||||||||||||||||||||||||||||  ||  |    
T  3831137 aatttgacttttcatatttcaagacaagatagaagtattaattagggatatgtttaggaaaaaattaataaatgcatctagtaatttgaaaaggggt--t 3831234  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| |  | ||||||||||||  ||| |||||||||    
T  3831235 tacatttagggacaaaaataaaatcaaattggcgcttagatataggaacggagggagtat 3831294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 36085060 - 36085217
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| |||||||||||||  ||||||| || ||||| ||||||||||||||||||         ||||||||||||||||||||||||||| |  |  |    
T  36085060 aatttaacttttcatatttcgagacaagataatagtattaattaggggtatgtttaagaaaaaaataataaatgcatctagtaatttgaaaaaagat--t 36085157  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||||||||||||||||| || ||||||||||||||||| |||| | |||||||    
T  36085158 tacatttagggacaaaaataaaattaaatgagtgcttagatatagggacggaaggagtat 36085217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 5322033 - 5321879
Alignment:
Q  184 ttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaatta 282  Q
    |||||||||||||||| |||||||| |||||||| ||| |||||||||||||||         ||||||||| ||||||||||||||||||  ||  |||    
T  5322033 ttgacttttcatatttcaagacaagatagtagtattaactaggggtatgtttagggaaaaaaataataaatgtatctagtaatttgaaaaggggt--tta 5321936  T
Q  283 catctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||| ||||||||||||||||||||| || ||| ||||| |||| |||| ||||||||    
T  5321935 catttagggacaaaaataaaatcaaatgggtgtttagacatagggacggagggagta 5321879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 4817919 - 4817762
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| | |||||||||         |||||||| |||||||||||||| |||   ||  |    
T  4817919 aatttgacttttcaaatttcaagacaagttagtagtattaattaagagtatgtttaagaacaaaataataaatacatctagtaatttggaaatgagt--t 4817822  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || |||||||||||||||||| || |||||||||||||| |||| |||||||||    
T  4817821 tacatttaaggacaaaaataaaatcaaatgggtgcttagatatagtgacggagggagtat 4817762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 4829719 - 4829562
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| | |||||||||         |||||||| |||||||||||||| |||   ||  |    
T  4829719 aatttgacttttcaaatttcaagacaagttagtagtattaattaagagtatgtttaagaacaaaataataaatacatctagtaatttggaaatgagt--t 4829622  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || |||||||||||||||||| || |||||||||||||| |||| |||||||||    
T  4829621 tacatttaaggacaaaaataaaatcaaatgggtgcttagatatagtgacggagggagtat 4829562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 34012577 - 34012733
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||||||||| |||||||| |||||||| |||||| ||||||||||||        |||||||||||||||||||||| |||| | ||  |    
T  34012577 aatttaacttttcatatttcaagacaagatagtagtattaattaagggtatgtttaggaaaaaa-taataaatgcatctagtaatttaaaaaaaagt--t 34012673  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||  ||||||||||||||||| |  ||||||||||||||||||| |||| ||||    
T  34012674 tacatttaacgacaaaaataaaatcaaatatgtgcttagatatagagacggagggtgtat 34012733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 51390550 - 51390394
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||        |||||||||||||||||||||| |||||  ||  |    
T  51390550 aatttgacttttcatatttcaagacaagttagtagttttaattaagggtatgtttag-gaaaaaataataaatgcatctagtaatttaaaaaggggt--t 51390454  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||| |||| |||| || ||| |||||||||| || | |||||||||    
T  51390453 tacatttagggacaaaattaaagtcaaatgggtgtttagatatagggatggagggagtat 51390394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 52141188 - 52141029
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||||||||||||| || ||| ||||| |||||||||        ||||||||||||||||| ||||||||||  ||  |    
T  52141188 aatttgactttttatattttaagacaagttagtaatattaactagggatatgtttaggaaaaaaataataaatgcatctagtgatttgaaaaggagt--t 52141091  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    ||||| ||||||||||||||||||||| ||  |||||| |||||  |||| | |||||||||    
T  52141090 tacatttagggacaaaaataaaatcaaatggatgcttaaatatatggacggatggagtatta 52141029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 3143493 - 3143651
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag-nnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |         ||||||||||||||  ||||||||||||  ||      
T  3143493 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttggaaaaaataataataaatgcatctgataatttgaaaaggggt-- 3143590  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
     ||||| ||||||||||||||||||||| || ||||||| |||||| |||| || ||||||    
T  3143591 gtacatttagggacaaaaataaaatcaaatgggtgcttaaatatagggacggagagagtat 3143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 33231934 - 33232054
Alignment:
Q  185 tgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattaca 284  Q
    ||||||||||||||| |||||||| |||| ||| |||||||||||||||||||        ||||||||||||||||||||||||||  ||| | ||| |    
T  33231934 tgacttttcatatttcaagacaagatagtggtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaa--atgaatttata 33232031  T
Q  285 tctagggacaaaaataaaatcaa 307  Q
    | ||||||||||| |||||||||    
T  33232032 tttagggacaaaagtaaaatcaa 33232054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 46591192 - 46591348
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| |||||| |||| |||||||||||||| || ||||||||||| | ||| |        |||||||| |||||||||||||||||| | ||  |    
T  46591192 aatttgatttttcaaatttcaagacaagttagtaatattaattaggggtgtatttgggaaaaagataataaatacatctagtaatttgaaaaaaagt--t 46591289  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||  |||||||||||| |||| ||||||||||||||||| |||  ||||||||    
T  46591290 tacatctaaagacaaaaataaagtcaaatgagtgcttagatatagggacagagggagta 46591348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 34696896 - 34696754
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||| ||||| |||||||  |||||||| |||||||||  ||||||||        |||||||| |||||||||||||||||||  ||  |    
T  34696896 aatttgacttttcctatttcaagacaaaatagtagtattaattagggacatgtttaggaaaaaaataataaatacatctagtaatttgaaaaggggt--t 34696799  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| |||| |||||||||||||||| ||  |||||||||||||    
T  34696798 tacatttaggaacaaaaataaaatcaaatggatgcttagatatag 34696754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 47643630 - 47643767
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||          ||||||||||||||||||||||| ||||  ||  |    
T  47643630 aatttgacttttcaaatttcaagacaagttagtagtattaattaagggtatgttttaaaaaataataataaatgcatctagtaatttggaaaggggt--t 47643727  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttaga 320  Q
    ||||| || |||||||||||||||||| || ||| |||||    
T  47643728 tacatttatggacaaaaataaaatcaaatgggtgtttaga 47643767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 32152248 - 32152387
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||        |||||||||||| |||||| || |||||  | | |    
T  32152248 aatttgacttttcatattttaagataagttagtagtattaattaggggtatgtttag-gaaaaaataataaatgcatatagtaa-ttcaaaag--ggatt 32152343  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    |||||||| ||||||||||||| | || || |||||||||||||    
T  32152344 tacatctaaggacaaaaataaagttaaatgtgtgcttagatata 32152387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 46732973 - 46732850
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||        |||||||||||| |||||||||  ||| | | | |    
T  46732973 aatttgacttttcatatttcaagacaaattagtagtaataattaggggtatgtttagggaaaaaataataaatgcat-tagtaattt--aaaaaaggatt 46732877  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| |||||||||||||||| ||||    
T  46732876 tacatttagggacaaaaataaagtcaa 46732850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 25063300 - 25063458
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataa--atgcatctagtaatttgaaaagatgta 278  Q
    ||||| ||||||||||||| | ||||||||||||| | |||||||||||||||||||        ||||||  ||| ||||||||||||||||||  ||     
T  25063300 aatttcacttttcatatttcacgacaagttagtaggattaattaggggtatgtttaggaaaaaaataataaatatgtatctagtaatttgaaaaggagt- 25063398  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
     |||||| || |||||||||||||||||| || ||| ||| |||||| || | ||||||||    
T  25063399 -ttacatttaaggacaaaaataaaatcaaatgggtggttacatatagggatggagggagta 25063458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 44652874 - 44652788
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaattt 267  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||        ||||||||||||||| ||||||    
T  44652874 aatttgacttttcatatttcaaaacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctaataattt 44652788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 3072227 - 3072283
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  3072227 aatttgacttttcatatttcaagacaagttagtagtattaattagaggtatgtttag 3072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 8877862 - 8878017
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||| ||| |||||||| ||||||||||||||||||         ||||||||||||||||||||||||||| | ||  |    
T  8877862 aatttgactttttatatttcaagataagatagtagtattaattaggggtatgtttattaaaaaaataataaatgcatctagtaatttgaaaata-gt--t 8877958  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || | || ||||||||||||| |  |||||||||||||| |||| ||| |||||    
T  8877959 tacatttaagaac-aaaataaaatcaaattggtgcttagatatagggacggaggtagtat 8878017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 13145508 - 13145600
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||| ||||||||| || |||||||||||||||||||        |||| ||| |||||||||||||||||||    
T  13145508 aatttgacttttcatattttaagataagttagtaatattaattaggggtatgtttaggaaaaaaataattaatacatctagtaatttgaaaag 13145600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 23982605 - 23982513
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||        ||||||||| |||||| |||||||||||    
T  23982605 aatttgacttttcatatttcaagataagttagtagtattaattagggatatgtttaggaaaataataataaatgtatctagcaatttgaaaag 23982513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 28334234 - 28334081
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaa-taaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| ||| |||| |||| ||| |||||||||||||||||||         || |||||||||||||||||||||||||  ||      
T  28334234 aatttgaattttcatattttaaggcaagatagtggtattaattaggggtatgtttaggaaaaataaaaataaatgcatctagtaatttgaaaaggggt-- 28334137  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggg 335  Q
    |||||| ||||||||||| ||||||||| || ||| ||| |||||| |||| ||||    
T  28334136 ttacatttagggacaaaagtaaaatcaaatgggtgtttacatatagggacggaggg 28334081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 51997045 - 51997170
Alignment:
Q  181 aatttgacttttcatatttgaa-gacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    |||||||||||||| |||| || ||||||||||||||| |||||| | ||||||||||        |||||||||||| | |||||||||||||  |  |    
T  51997045 aatttgacttttcaaatttcaaagacaagttagtagtattaattaagagtatgtttaggaaaaaaataataaatgcatattgtaatttgaaaagggg--a 51997142  T
Q  280 ttacatctagggacaaaaataaaatcaa 307  Q
    |||||| |||||||||||||||||||||    
T  51997143 ttacatttagggacaaaaataaaatcaa 51997170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 28723666 - 28723539
Alignment:
Q  181 aatttgacttttcatat--ttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgt 277  Q
    |||||||||||||||||  || |||||||||| ||| || |||||||||||||||||||         |||||| |||||||||||||||||||||||||    
T  28723666 aatttgacttttcatatatttcaagacaagttggtaatattaattaggggtatgtttaggaaaaataataataactgcatctagtaatttgaaaagatgt 28723567  T
Q  278 aattacatctagggacaaaaataaaatcaa 307  Q
      ||| || || ||||||||||||||||||    
T  28723566 --ttatatttaaggacaaaaataaaatcaa 28723539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 32715948 - 32716039
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||||| ||||||||||||||||||||  ||  |||||| ||| ||||||||||||||||| || |||||||||||||| |||| |||||||||    
T  32715948 taataaacgcatctagtaatttgaaaagg-gt--ttacatttagagacaaaaataaaatcaaatgggtgcttagatatagggacggagggagtat 32716039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 13698921 - 13699014
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||| ||||||||||| |||| |||||||||||| ||||||  |||||||||||        ||||||||||| |||||||||||||||||    
T  13698921 aatttgatttttcatattttaagataagttagtagtattaattataggtatgtttagggaaaaaataataaatgcaactagtaatttgaaaaga 13699014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 20564865 - 20564921
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||    
T  20564865 aatttgacttttcatatttcaagacaagttagtagtattaattagatgtatgtttag 20564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 29140667 - 29140611
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||||||| |||| ||| |||||||||||||||||||    
T  29140667 aatttgacttttcatatttcaagacaagatagtggtattaattaggggtatgtttag 29140611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 340
Target Start/End: Complemental strand, 30898572 - 30898419
Alignment:
Q  185 tgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattaca 284  Q
    ||||| ||||||||| |||| |||||||||| | ||| |||||||||||||||        ||||||||| |||| ||||||||||||   ||  |||||    
T  30898572 tgactattcatattttaagataagttagtagcattaaataggggtatgtttaggaaaaaaataataaatgtatctggtaatttgaaaaagggt--ttaca 30898475  T
Q  285 tctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    | |||| |||||||||||||||| |  || ||||||||||| |||  |||||||||    
T  30898474 tttaggaacaaaaataaaatcaaataggtacttagatatagggacagagggagtat 30898419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4082016 - 4082107
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||||        ||| |||||||| ||||||||||||||    
T  4082016 aatttgatttttcatatttaaagacaagttagtattattaattagggatatgtttaggaaaataataacaaatgcatttagtaatttgaaaa 4082107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 8984674 - 8984582
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||| |||| || ||||||||| |||||| ||||| ||||||         ||||||||||||||||||||||||||||    
T  8984674 aatttgacttttcatatttcaagataaattagtagtattaatta-gggtaagtttaggaaaaataaaataaatgcatctagtaatttgaaaaga 8984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 35365997 - 35365852
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag--nnnnnnnntaataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| |||||||||||  |||| ||||||  |||||||||||          ||||||||||||||||||||||||||  |||      
T  35365997 aatttgacttttcatattttaagacaagttaacagtattaattaaaggtatgtttagaaaataataataataaatgcatctagtaatttgaaa--atggg 35365900  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatataga 326  Q
     || | | |||||||||||||||| |||| || ||||||| |||||||    
T  35365899 tttgcgtttagggacaaaaataaagtcaaatgtgtgcttaaatataga 35365852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 47070974 - 47070921
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtt 234  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  47070974 aatttgatttttcatatttcaagacaagttagtagtattaattagaggtatgtt 47070921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 2342994 - 2343131
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||          || ||||| ||||| ||||||||||||  | | |    
T  2342994 aatttgacttttcatatttcaaggcaagttagtagtattaatta-gggtatgttta---tgaagaaaaaaaatgtatctaataatttgaaaag--ggact 2343087  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| |||||| ||||| |||||||| ||||||| ||||||||    
T  2343088 tacatttagggataaaaagaaaatcaaatgagtgcctagatata 2343131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 30336149 - 30336205
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  30336149 aatttgaattttcatatttcaagataagttagtagtattaattagggatatgtttag 30336205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 32144401 - 32144457
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||| || || ||||||||| |||||||||    
T  32144401 aatttgacttttcatattttaagacaagttaataatattaattagggatatgtttag 32144457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 15179500 - 15179555
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||||||| ||||||||    
T  15179500 aatttgacttttcgtatttcaagacaagttagtaggattaattagggatatgttta 15179555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 6282694 - 6282784
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||||| ||||||||||| ||||||| |||||| || |||||||| || |||||||        ||||||||| ||||||||||||||||    
T  6282694 aatttgatttttcatattttaagacaaattagtaatattaattaggagtctgtttagaaaaataataataaatgtatctagtaatttgaaa 6282784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 10443489 - 10443527
Alignment:
Q  14 tagatacacaaggatacttacatgatacttcatagatac 52  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  10443489 tagatacacgaggatacttacatgatacttcatagatac 10443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 32047530 - 32047651
Alignment:
Q  181 aatttgactttt-catatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    |||||||||||| ||||||| |||||||| |||||||| || |||||||||||||||         ||||||||||||| |||||||||||||   ||      
T  32047530 aatttgactttttcatatttcaagacaagatagtagtattatttaggggtatgttta-agaaaaaataataaatgcatcaagtaatttgaaaaagggt-- 32047626  T
Q  280 ttacatctagggacaaaaataaaat 304  Q
    |||||| |||||| |||||||||||    
T  32047627 ttacatttagggataaaaataaaat 32047651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 328
Target Start/End: Complemental strand, 29302437 - 29302357
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagaga 328  Q
    |||||||||||||||||||||||||||||   | ||| || || |||||||||| |||| || || ||| |||||||||||||    
T  29302437 taataaatgcatctagtaatttgaaaaga--gatttatatttaaggacaaaaattaaattaaatgggtgtttagatatagaga 29302357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 31305464 - 31305515
Alignment:
Q  288 agggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||| ||||| |||| ||||||||||||||||| |||| ||||||||    
T  31305464 agggacaaacataaagtcaaatgagtgcttagatatagggacggagggagta 31305515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 330
Target Start/End: Original strand, 25269467 - 25269613
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||||||||  || |||| || |  || ||||||||||||||||||         ||||||||||||||||||||||||||||  ||  |    
T  25269467 aatttgacttttcatatttcgaggcaagataatgatattaattaggggtatgttta-agaaaaagtaataaatgcatctagtaatttgaaaaggggt--t 25269563  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    || || |||| |||||| ||||||||| || ||  ||| |||||||||||    
T  25269564 tatatttaggaacaaaagtaaaatcaaatgggtatttatatatagagacg 25269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 31807985 - 31807939
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    |||||||| |||| ||||| ||||||||||||||||| |||||||||    
T  31807985 aatttgacatttcctatttcaagacaagttagtagtattaattaggg 31807939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 34028514 - 34028469
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattagg 226  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  34028514 aatttgacttttcatattccaaggcaagttagtagtattaattagg 34028469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 291648 - 291592
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||| |||||| |||||| |||| |||||||||||| |||||||| |||| |||||    
T  291648 aatttaactttttatattttaagataagttagtagtattaattaggagtatatttag 291592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 5852652 - 5852624
Alignment:
Q  246 taataaatgcatctagtaatttgaaaaga 274  Q
    |||||||||||||||||||||||||||||    
T  5852652 taataaatgcatctagtaatttgaaaaga 5852624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 10842417 - 10842473
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||  |||||   ||| |||||||||||||||||||    
T  10842417 aatttgacttttcatatttcaagatgagttaacggtattaattaggggtatgtttag 10842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 15911561 - 15911509
Alignment:
Q  185 tgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||| |||||||||| |||||||||||||| || ||||||  |||||||||||    
T  15911561 tgacatttcatatttcaagacaagttagtaatattaattaaaggtatgtttag 15911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 16582690 - 16582718
Alignment:
Q  246 taataaatgcatctagtaatttgaaaaga 274  Q
    |||||||||||||||||||||||||||||    
T  16582690 taataaatgcatctagtaatttgaaaaga 16582718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 44335382 - 44335438
Alignment:
Q  181 aatttgacttttcatatttgaa-gacaagttagtagtactaattaggggtatgttta 236  Q
    |||||||||||||| |||| || ||||||||||||||| |||||| || ||||||||    
T  44335382 aatttgacttttcaaatttcaaagacaagttagtagtattaattaaggatatgttta 44335438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 57203 - 57061
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| || ||||| |||||| ||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  57203 aatttgacttttcatatttcaagacaagataatagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggt--t 57106  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||    
T  57105 tacatttagggacaaaaataaaatcaaatgagtgcttagatatag 57061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 31252670 - 31252512
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||         ||||||||||||||||||||||||||||| ||  |    
T  31252670 aatttgacttttcatattttaagacaagatagtagtataaattaggggtatgtttaagaaaataataataaatgcatctagtaatttgaaaagaggt--t 31252573  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| |||| |||||||||||||||| ||  ||||||||||||  |||||||||||||||    
T  31252572 tacatttaggaacaaaaataaaatcaaatggatgcttagatataaggacgaagggagtatt 31252512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 25198380 - 25198532
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||| ||  |    
T  25198380 aatttgacttttcatatttcaagataagttagtagtattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaga-gt--t 25198476  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggga 336  Q
    ||||| |||||||||||||||| |||| |  |||||||||||||| |||| |||||    
T  25198477 tacatttagggacaaaaataaagtcaaataggtgcttagatatagggacggaggga 25198532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 38773363 - 38773207
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| |||||||| | |||||| ||||||| |||||||||||        ||||||||||||||| ||||||||||||| ||  |    
T  38773363 aatttgatttttcatatttcaagacaagatggtagtattaattagaggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaagaggt--t 38773266  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || |||||| |||||||||||||| ||||||||||||||||| |||| ||||||||    
T  38773265 taaatttagggataaaaataaaatcaaatgagtgcttagatatagtgacggagggagta 38773207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 38761373 - 38761230
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn--taataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||          ||||||||||||||||||||||||||||  ||     
T  38761373 aatttgacttttcatatttcaagacaagatagtagtattaattagggatatgtttagaagaaaaaaataataaatgcatctagtaatttgaaaaggggt- 38761275  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
     |||||| ||||||||||||||||||||| ||| ||||||||||||    
T  38761274 -ttacatatagggacaaaaataaaatcaaatgaatgcttagatata 38761230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 43980598 - 43980440
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| |||| || ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  43980598 aatttgactttttgtatttcaagataaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 43980501  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| || |||||||||||||||||| || ||||||| |||||| |||| ||||||||||    
T  43980500 tacatttaaggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtatt 43980440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 26878743 - 26878586
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||        |||||||| ||||||||||||| |||| | ||  |    
T  26878743 aatttgactttacatatttcaagataagttagtagtattaattaggggtatgtttaggaaaaaaataataaatacatctagtaatttaaaaaaaagt--t 26878646  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| || ||  ||| |||||| |||| |||||||||    
T  26878645 tacatttagggacaaaaataaaatcaaatgggttgttacatatagggacggagggagtat 26878586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 40517831 - 40517988
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||        ||||||||| ||||| ||||||||||||  ||  |    
T  40517831 aatttgactttttaaatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatggatctaataatttgaaaaggagt--t 40517928  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||||||||||||||| |||| ||  || |||||||||| |||| |||||||||    
T  40517929 tacatttagggacaaaaataaagtcaaatggatgtttagatatagggacggagggagtat 40517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 12762933 - 12763092
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||||||| |||||        ||||||||||||||||||||||| ||||  ||  |    
T  12762933 aatttgacttttcatatttcaagacaagttagtaatattaattaggggtatctttaggaaaaaaataataaatgcatctagtaatttggaaag-ggt--t 12763029  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtattag 343  Q
    || || ||||||||||||||||||||| ||  || |||||||||  |||| ||||||||||||    
T  12763030 tagatttagggacaaaaataaaatcaaatggatgtttagatataaggacggagggagtattag 12763092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 45183876 - 45183721
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||||||||||||||||||| | | |||||||||||||||||        |||||||||||||||||||||| |||||  ||  |    
T  45183876 aatttgacttttcaaatttgaagacaagttagtag-attgattaggggtatgtttagaaaaaaaataataaatgcatctagtaatttaaaaaggagt--t 45183780  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||| |||||||||||||||||  | ||| |||||||||| |||| ||||||||    
T  45183779 tacatttagagacaaaaataaaatcaaacgtgtgtttagatatagggacggagggagta 45183721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 24512182 - 24512025
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||| ||  |||||||| |||||||||||||||||| |        |||||||||||||||  ||||||||||   | |     
T  24512182 aatttgacttttcatatttcaagataaaatagtagtattaattaggggtatgtttaagaaaaataataataaatgcatctaagaatttgaaaaa--ggat 24512085  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||  |||| ||||||||    
T  24512084 ttacatttagggacaaaaataaaatcaaatgagtgcttagatatatggacggagggagta 24512025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 45203849 - 45203935
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaattt 267  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||    
T  45203849 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaataataataaatgcatctagtaattt 45203935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 31746420 - 31746279
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||  |||||||||| || |||||||||||||||||||        ||||||||| ||||||||||||||||||  ||  |    
T  31746420 aatttgacttttcatatttcaaagcaagttagtattattaattaggggtatgtttaggaaaaaa-taataaatgtatctagtaatttgaaaaggggt--t 31746324  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| |||||||||||||||| |||| || |||||||| |||||    
T  31746323 tacatttagggacaaaaataaagtcaaatgggtgcttagttatag 31746279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 41087065 - 41087221
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||| |||||| |||||        |||||||||||| ||||||||||||| |||||  |    
T  41087065 aatttgatttttcatatttcaagacaagttagtagtattaattaagggtat-tttaggaaaaaaataataaatgcatatagtaatttgaaaggatgt--t 41087161  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||| | ||||||||| |||| |||| | |||||||||  |||| |||||||||    
T  41087162 tacatttaggaataaaaataaagtcaaatgagaggttagatataaggacggagggagtat 41087221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 24962380 - 24962224
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  24962380 aatttaactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 24962283  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| || |||||||||||||||||| ||  ||| || |||||| |||| ||||||||    
T  24962282 tacatttaaggacaaaaataaaatcaaatggatgcctacatatagggacggagggagta 24962224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 1769463 - 1769325
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||         ||||||||||||||| |||||||||| || ||  |    
T  1769463 aatttgactttttatatttcaagacaagttagtagtattaattaagggtatgttta-agaaaaaataataaatgcatctaataatttgaaatgaggt--t 1769367  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagata 322  Q
    ||||| |||  |||||||||||||||| ||| ||||||||||    
T  1769366 tacatttagtaacaaaaataaaatcaaatgaatgcttagata 1769325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 5191564 - 5191425
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||         || |||||||||||||||||||||||||  ||  |    
T  5191564 aatttgatttttcatatttcaagacaatttagcagtactaattaggggtatgtttaagaaaaaaatattaaatgcatctagtaatttgaaaaggggt--t 5191467  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagata 322  Q
    ||||| |||| ||||||||||||| || |  |||||||||||    
T  5191466 tacatttaggaacaaaaataaaataaaataggtgcttagata 5191425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 10396245 - 10396090
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||| ||||| |||||||| || || || ||||||||| |||||||||         |||||||||||||||||||||||||||  ||  |    
T  10396245 aatttgacttttcgtatttcaagacaagataataatattaattagggatatgtttaggaaaaaataaataaatgcatctagtaatttgaaaaggggt--t 10396148  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagt 338  Q
    || ||  ||||||||||| ||||||||  | |||||||||||||| ||||||||||||    
T  10396147 tatattaagggacaaaaacaaaatcaaacgggtgcttagatatagggacgaagggagt 10396090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 38203007 - 38202865
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| |||||||| | |||||| ||||||||||||| ||||         ||||||||||||||||||||||||||||  ||  |    
T  38203007 aatttgatttttcatatttcaagacaagatggtagtattaattaggggtatatttaagaaaaaaataataaatgcatctagtaatttgaaaaggggt--t 38202910  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    || || ||| ||||||||||||||||| || ||| ||||||||||    
T  38202909 tatatgtagagacaaaaataaaatcaaatgggtgtttagatatag 38202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 40790879 - 40791021
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||| ||||||||| ||||||| ||||||||| ||| |||||| |||||||         |||||||| | |||||||||||||||||  | |||    
T  40790879 aatttgactattcatatttcaagacaacttagtagtattaactaggggcatgtttaagaaaaaaataataaatacctctagtaatttgaaaag--gaaat 40790976  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| ||||||||||||||||||||| || ||| ||||| ||||    
T  40790977 tacatttagggacaaaaataaaatcaaatgggtgtttagacatag 40791021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 36437592 - 36437684
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |        |||||||||||||||||||||||||||    
T  36437592 aatttgacttttcatatttcaagacaagttagtagtattagttaggggtatgtttaggcaaaaaaataataaatgcatctagtaatttgaaaa 36437684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 34158008 - 34158166
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||| |||||  ||||| ||||||| ||||||| | |||||| || |||||||||        |||||||||||| ||||||||||||||  || | |    
T  34158008 aatttggctttttgtattttaagacaaattagtaggattaattatgg-tatgtttaggaaaataataataaatgcatatagtaatttgaaaa--tgaatt 34158104  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||  ||| || ||||||||    
T  34158105 tacatttagggacaaaaataaaatcaaatgagtgcttaaatataggaacggagagagtatta 34158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 1177171 - 1177013
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| |        |||||||||||||||||||||| |||||  ||      
T  1177171 aatttgatttttcatatttcaaaacaagatagtagtattaattaggggtatgtttaggaaaaaaaataataaatgcatctagtaatttaaaaaggggt-- 1177074  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||| || ||| ||||||| |||||| || |||||| ||| |||||| |||| |||||||||    
T  1177073 ttatatttagagacaaaagtaaaattaaatgagtgtttacatatagggacggagggagtat 1177013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 7172313 - 7172464
Alignment:
Q  184 ttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattac 283  Q
    |||||||||||||||| |||| |||||||||||| | |||| ||| |||||||         ||||||||||||||||||||||||||||  |   ||||    
T  7172313 ttgacttttcatatttcaagataagttagtagtatttattatgggcatgttta-tgaaaaaataataaatgcatctagtaatttgaaaagggg---ttac 7172408  T
Q  284 atctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || ||||||| |||||||| |||| ||  || ||||||||||||||| ||||||||    
T  7172409 atttagggactaaaataaagtcaaatggatggttagatatagagacggagggagta 7172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 25185121 - 25185265
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaat---gcatctagtaatttgaaaagatgt 277  Q
    |||||| |||||||||||| |||| ||| |||||||| |||||||||||||||||||          ||||||   |||||||||||||||||||| |||    
T  25185121 aatttgtcttttcatatttcaagataagatagtagtattaattaggggtatgtttaggaaaaaaaagataaataatgcatctagtaatttgaaaaggtgt 25185220  T
Q  278 aattacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
      |||||| || ||||||||||| ||| || ||||||||||||||||    
T  25185221 --ttacatttatggacaaaaatagaattaaatgagtgcttagatata 25185265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 37600903 - 37600783
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagta-ctaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa-agatgta 278  Q
    ||||||||||||||||||| |||||||||||||| ||  |||||||||||||||||||        ||||||||||||||| |||||||||| ||| ||     
T  37600903 aatttgacttttcatatttcaagacaagttagtaatatttaattaggggtatgtttagaaaaaaaataataaatgcatctaataatttgaaagaga-gt- 37600806  T
Q  279 attacatctagggacaaaaataaa 302  Q
     |||||| ||||||||||||||||    
T  37600805 -ttacatttagggacaaaaataaa 37600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 40337203 - 40337066
Alignment:
Q  184 ttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattac 283  Q
    |||||||||||||||| |||||||| || ||||| |||||| ||||||||||||        |||||||||||| |||||||||||||| | ||  ||||    
T  40337203 ttgacttttcatatttcaagacaagataatagtattaattaagggtatgtttaggaaaaaaataataaatgcatatagtaatttgaaaataggt--ttac 40337106  T
Q  284 atctagggacaaaaataaaatcaagtgagtgcttagatat 323  Q
    || || ||| ||||||||||| || |||||| ||| ||||    
T  40337105 atttaaggataaaaataaaattaaatgagtgtttacatat 40337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 40808026 - 40807902
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||  ||||||||||        || ||||||||| ||||||||||||| || ||  |    
T  40808026 aatttgacttttcatatttcaagacaagttagtagtattgattagttgtatgtttaggaaaataatattaaatgcatgtagtaatttgaaatgaggt--t 40807929  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| || ||||||||||||| ||||    
T  40807928 tacatttaaggacaaaaataaagtcaa 40807902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 14522357 - 14522267
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||| |||| |||| |||| |||||||||||| |||||| ||||||||||||        ||||||||||||||||||||||||||||    
T  14522357 tttgactattcaaatttcaagataagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaag 14522267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 22590466 - 22590559
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||||||||||| |         ||||||||| |||||||||||||||||||    
T  22590466 aatttgacttttcatattgcaagataagttagtagtattaattaggggtatgttcaaggaaataataataaatggatctagtaatttgaaaaga 22590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 337
Target Start/End: Complemental strand, 43191484 - 43191342
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatcta 288  Q
    ||||||||||| |||| |||||||||| | |||||||||||||||||||         || ||||||||||||||||||||||||  ||  |||||| ||    
T  43191484 ttttcatatttcaagataagttagtaggattaattaggggtatgtttaggagaa----aaaaaatgcatctagtaatttgaaaaggagt--ttacattta 43191391  T
Q  289 gggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggag 337  Q
    | ||||||||||||||||| ||  |||||| |||||  |||| ||||||    
T  43191390 gagacaaaaataaaatcaaatggatgcttacatataaggacggagggag 43191342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 36309611 - 36309555
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||    
T  36309611 aatttgacttttcatattttaagacaagttagtattattaattagggttatgtttag 36309555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 183 - 341
Target Start/End: Complemental strand, 45185280 - 45185123
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag-nnnnnnnntaataaatgcatctagtaatttgaaaagatgtaatt 281  Q
    |||||||||||| |||| ||||||||||||||||| | |||| ||||||||||||         ||||||||||||| ||||||||||||  |||   ||    
T  45185280 tttgacttttcaaattttaagacaagttagtagtattgattaagggtatgtttagaaaaaataataataaatgcatccagtaatttgaaa--atgagttt 45185183  T
Q  282 acatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    |||| ||| |||||||||||| |||| |||||  || |||||| ||| | ||||||||||    
T  45185182 acatttagagacaaaaataaagtcaaatgagtatttggatataaagatggagggagtatt 45185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 330
Target Start/End: Complemental strand, 30262547 - 30262408
Alignment:
Q  187 acttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatc 286  Q
    |||||||| |||| ||||||||||||||||| |||||||||| ||||||||        |||| ||||||||||||||||||  || | | | ||| ||     
T  30262547 acttttcaaatttcaagacaagttagtagtattaattaggggcatgtttag-aaaaaaataat-aatgcatctagtaatttg--aataaggatttatatt 30262452  T
Q  287 tagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    || |||||||| ||||||||| | ||||||||||||||||||||    
T  30262451 tatggacaaaattaaaatcaaataagtgcttagatatagagacg 30262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 41371818 - 41371763
Alignment:
Q  182 atttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| | |||||||||    
T  41371818 atttgacttttcatatttcaagacaagttagtagtattaattagagttatgtttag 41371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 14577667 - 14577614
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtt 234  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  14577667 aatttgatttttcatatttcaagacaagttagtagtattaattagggatatgtt 14577614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 337
Target Start/End: Original strand, 17933796 - 17933948
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa--gatgta 278  Q
    |||||||||||||||||  ||||||||| || || || |||||| | ||||||||||        ||||||||| |||||||||||||||||  ||||||    
T  17933796 aatttgacttttcatatacgaagacaaggtattaatattaattatgagtatgtttaggaaaaa--taataaatgtatctagtaatttgaaaaaggatgta 17933893  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggag 337  Q
         || ||||||||||||||||||||| |||||| |||||||||  |||| ||||||    
T  17933894 t----atttagggacaaaaataaaatcaaatgagtgtttagatataaggacggagggag 17933948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 7772667 - 7772744
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    |||||||| |||||||||||||||||||||||  ||| || ||||||||||| ||||||||| || ||| ||| ||||||    
T  7772667 taataaatacatctagtaatttgaaaagatgt--ttatatttagggacaaaagtaaaatcaaatgggtgtttacatatag 7772744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 10709405 - 10709460
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||| ||||||||| || |||||||||||||| ||||||||| ||||||||    
T  10709405 aatttgactattcatatttcaaaacaagttagtagtaataattagggatatgttta 10709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 23399792 - 23399737
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||||| ||||||||||    
T  23399792 aatttgacttttcatatttcaaaccaagttagtagtattaattagaggtatgttta 23399737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 40601990 - 40601914
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||||||||||||||||||||||||||| ||  |||||| || ||||||||||||| |||| ||  || |||||||||    
T  40601990 taataaatgcatctagtaatttgaaaagaggt--ttacatttaaggacaaaaataaagtcaaatggatgtttagatata 40601914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 2303248 - 2303339
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||| | ||||||||||||||||||  ||  |||||| | |||||||||||||| |||| ||  ||||||||||||| |||| ||||||||    
T  2303248 taataaacgaatctagtaatttgaaaaggagt--ttacatttcgggacaaaaataaattcaaatggttgcttagatatagggacggagggagta 2303339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 2327842 - 2327933
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||| | ||||||||||||||||||  ||  |||||| | |||||||||||||| |||| ||  ||||||||||||| |||| ||||||||    
T  2327842 taataaacgaatctagtaatttgaaaaggagt--ttacatttcgggacaaaaataaattcaaatggttgcttagatatagggacggagggagta 2327933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 10860831 - 10860930
Alignment:
Q  201 aagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaata 300  Q
    ||||||||||||||||| |||||| ||  ||||||||        |||||||||||||||||||||||  |||||| | |||||| |||||| |||||||    
T  10860831 aagacaagttagtagtattaattatggaaatgtttaggaaaaatataataaatgcatctagtaatttg--aagatggatttacatttagggataaaaata 10860928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 4273916 - 4273862
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaa 302  Q
    ||||||||||||||||||||||||||||| ||  |||||| || |||||||||||||    
T  4273916 taataaatgcatctagtaatttgaaaagaagt--ttacatttaaggacaaaaataaa 4273862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 7727363 - 7727318
Alignment:
Q  182 atttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||    
T  7727363 atttgacttttcatattccaagacaagttagtagtattaattaggg 7727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 342
Target Start/End: Original strand, 37956274 - 37956364
Alignment:
Q  250 aaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    |||||||| ||||||||| |||||  ||  |||||| ||||||||||||||||||||| |   | ||||||||||| ||||||| ||||||||    
T  37956274 aaatgcatttagtaatttaaaaaggggt--ttacatttagggacaaaaataaaatcaaatagatacttagatatagggacgaagcgagtatta 37956364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 12998683 - 12998647
Alignment:
Q  201 aagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||| |||||||||||||||||||    
T  12998683 aagacaagttagtagtattaattaggggtatgtttag 12998647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 14907224 - 14907279
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||| ||||||||||| |||| ||||||| |||| |||||| |||||||||||    
T  14907224 aatttgatttttcatatttcaagataagttagcagtattaattaagggtatgttta 14907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 24276572 - 24276517
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||| ||||| ||||||| || ||||||||||| || ||||||||||||||||||    
T  24276572 aattttactttacatatttcaaaacaagttagtaatattaattaggggtatgttta 24276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 33385337 - 33385380
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaatta 224  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||    
T  33385337 aatttgacttttcgtatttcaagacaagttagtagtattaatta 33385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 14846936 - 14846890
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  14846936 aatttgactttttatatttcaagacaagttagtggtattaattaggg 14846890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 25888686 - 25888740
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt 235  Q
    ||||||| ||||||||||| ||||||| |||||| || |||||||| ||||||||    
T  25888686 aatttgatttttcatattttaagacaaattagtactattaattaggagtatgttt 25888740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 40337342 - 40337304
Alignment:
Q  45 atagatactccctccgtccctttatgtaggcatccattg 83  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  40337342 atagctactccctccgtcccttaatgtaggcatccattg 40337304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 25961590 - 25961541
Alignment:
Q  182 atttgacttttcatatttgaagacaagttagtagtactaattaggggtat 231  Q
    ||||||||||| |||||||||||||||||  ||||| |||||| ||||||    
T  25961590 atttgactttttatatttgaagacaagttgatagtattaattaagggtat 25961541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 24962224 - 24962256
Alignment:
Q  50 tactccctccgtccctttatgtaggcatccatt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  24962224 tactccctccgtccctatatgtaggcatccatt 24962256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 1763904 - 1764060
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||        ||||||||||||||| ||||||| |||| |||  |    
T  1763904 aatttgacttttcaaatttcaagacaagttagtagtattaattaagggtatgtttaggaaaataataataaatgcatctaataatttggaaaggtgt--t 1764001  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || ||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  1764002 tatatttagagacaaaaataaaatcaaatgagtgcttagatatagggacggagggagta 1764060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 30248953 - 30249105
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||        ||||||||| ||||||||||||||||| | ||  |    
T  30248953 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttag-gaaaaaataataaatggatctagtaatttgaaaataggt--t 30249049  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggga 336  Q
    ||||| |||||||||||||||| |||| || ||||||||||||||  |||||||||    
T  30249050 tacatttagggacaaaaataaagtcaaatgggtgcttagatataggaacgaaggga 30249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 31945927 - 31945771
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||        ||||||||||||||||||||||||||||| ||  |    
T  31945927 aatttgactttacatatttcaagacaagttagtagtattaattagggatatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagaagt--t 31945830  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||| ||||||||||||||||| |||||| ||| |||||  |||| ||||||||    
T  31945829 tacatttagagacaaaaataaaatcaaatgagtggttacatataaggacggagggagta 31945771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 19839022 - 19839180
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| |||| || ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  19839022 aatttgactttttgtatttcaagataaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 19839119  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| ||||||||||    
T  19839120 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtatt 19839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 34513233 - 34513115
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  34513233 aatttgacttttcatatttcaagacaagatagtagtaataattaggggtatgtttag-aaaaaaataataaatgcatctagtaatttgaaaaggagt--t 34513137  T
Q  281 tacatctagggacaaaaataaa 302  Q
    ||||| |||| |||||||||||    
T  34513136 tacatttaggaacaaaaataaa 34513115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 30465983 - 30465859
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| |||||| ||| ||||||||        ||||||||||||||||||||||||||||| ||  |    
T  30465983 aatttgacttttcatatttcaagataagttagtagtattaattaaggggatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagaagt--t 30465886  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| || | ||||||||||| ||||    
T  30465885 tacatttatgaacaaaaataaagtcaa 30465859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 11302946 - 11303105
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaat-gcatctagtaatttgaaaagatgta 278  Q
    |||||||||||||| |||| |||||||  |||||||| |||||||||||||||||| |        |||||||  ||||||||| ||||||||||| ||     
T  11302946 aatttgacttttcacatttcaagacaaaatagtagtattaattaggggtatgtttaagaaaaaaaataataaaaagcatctagttatttgaaaagaagt- 11303044  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
     |||||| || |||||||||||||||||| || || ||||||||||| |||| |||||||||    
T  11303045 -ttacatttaaggacaaaaataaaatcaaatgggttcttagatatagggacggagggagtat 11303105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 3887949 - 3887866
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||        ||||||||||||||| |||||||||||    
T  3887949 ttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaa 3887866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 28238329 - 28238238
Alignment:
Q  181 aatttgactttt-catatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||    
T  28238329 aatttgactttttcatatttcaagacaagttagtagtattaattaggggtatgtttag-gaaaaaataataaatgcatctagtaatttgaaaa 28238238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 15981885 - 15982004
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||||||||| ||||||||||| ||||| ||||||  ||||||||| |        ||||||||||||||||||||||||||| | ||  |    
T  15981885 aatttaacttttcatatttcaagacaagttaatagtattaattataggtatgttttgaaaaaatataataaatgcatctagtaatttgaaaaaaggt--t 15981982  T
Q  281 tacatctagggacaaaaataaa 302  Q
    ||||| ||||||||||||||||    
T  15981983 tacatttagggacaaaaataaa 15982004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 9461384 - 9461474
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||||||||||||||||| |||||| |||||||| | |||||| ||||||||||||        ||||||||||||||| ||||||||||    
T  9461384 aatttgacttttcatatttcaagacaggttagtagaattaattatgggtatgtttagaaaaaaaataataaatgcatctaataatttgaaa 9461474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 6791467 - 6791609
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| | |||| |||||||| || | ||| ||| |||| ||||||||||        ||||||||||||||||||| ||||||||  ||  |    
T  6791467 aatttgactttttaaatttcaagacaagataattgtattaactaggagtatgtttaggaaaaaaataataaatgcatctagtaagttgaaaaggggt--t 6791564  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||| ||  ||||||||||||||||| || ||||||||||||||    
T  6791565 tacatttaaagacaaaaataaaatcaaatgggtgcttagatatag 6791609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 16327214 - 16327307
Alignment:
Q  181 aatttgacttttcatatttgaagacaagtta-gtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||| ||||||||||||| |||||||||||  ||||| ||||||| |||||||||||        ||||||||||||||||||||||||||||    
T  16327214 aatttaacttttcatatttcaagacaagttatttagtattaattagaggtatgtttaggaaaaatataataaatgcatctagtaatttgaaaag 16327307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 16350612 - 16350705
Alignment:
Q  181 aatttgacttttcatatttgaagacaagtta-gtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||| ||||||||||||| |||||||||||  ||||| ||||||| |||||||||||        ||||||||||||||||||||||||||||    
T  16350612 aatttaacttttcatatttcaagacaagttatttagtattaattagaggtatgtttaggaaaaatataataaatgcatctagtaatttgaaaag 16350705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 5895822 - 5895914
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||| ||||||||||||| |||||||| |||| ||| |||||||||| || |||||        ||||||||||||||||||||||||||||    
T  5895822 aatttaacttttcatatttcaagacaagatagtggtattaattaggggcatatttaggaaaaaattaataaatgcatctagtaatttgaaaag 5895914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 31039237 - 31039293
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||| |||||    
T  31039237 aatttgacttttcatatttcaagacaagttagtagtattgattaggggtatctttag 31039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 33607446 - 33607535
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    ||||||||||||||||||| | || ||||||| |||| |||||||||||||||||||         ||||||||||||||||||||||||||    
T  33607446 aatttgacttttcatatttcatgataagttagcagtattaattaggggtatgtttaggaaaaaa--aataaatgcatctagtaatttgaaaa 33607535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 9941113 - 9941169
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||  |||||||||||    
T  9941113 aatttgacttttcatatttaaagacaagttaatagtattaattaaaggtatgtttag 9941169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 12514600 - 12514501
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttag---tagtactaattaggggtatgtttag---nnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||| ||||||||||||   || || |||||||||||||||||||           |||||||||||||||||||||||||||||    
T  12514600 aatttgacttttcatatttcaagacaagttagtgctattattaattaggggtatgtttagggtaacaaaaataataaatgcatctagtaatttgaaaaga 12514501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 31536103 - 31536239
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||  ||||||| || |        ||||||||||| ||||||||||||||||  ||      
T  31536103 aatttgacttttcatatttcaagataagttagtagtattaattataggtatgtataggaaaaaaaataataaatgcaactagtaatttgaaaaggggt-- 31536200  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgctta 318  Q
    ||||||  || |||||| |||||||||| || |||||||    
T  31536201 ttacattcagtgacaaatataaaatcaaatgggtgctta 31536239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 3729513 - 3729636
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||| ||||||| |||||||||||||| || |||||||| ||||||||||        ||||||||||||||| |||||| |||||| |  ||    
T  3729513 aatttaactttacatatttcaagacaagttagtaatattaattaggagtatgtttag-aaaaaaataataaatgcatctaataatttaaaaagaag--at 3729609  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| ||  || ||||||||||||||    
T  3729610 tacatataaagataaaaataaaatcaa 3729636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 10260617 - 10260564
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||    
T  10260617 tttgacttttcatatttcaagacaagttag-agtattaattaggggtatgcttag 10260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 12503628 - 12503569
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttag---tagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||   || || |||||||||||||||||||    
T  12503628 aatttgacttttcatatttcaagacaagttagtactattattaattaggggtatgtttag 12503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 8644810 - 8644755
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||| |||||  |||| ||||||| ||||||||| ||||||||||||||||||    
T  8644810 aatttgaattttctcattttaagacaatttagtagtattaattaggggtatgttta 8644755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 5191246 - 5191300
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt 235  Q
    ||||||| ||||||||||| |||| |||||||||||| ||||||||  |||||||    
T  5191246 aatttgaattttcatatttcaagataagttagtagtattaattaggattatgttt 5191300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 5895691 - 5895724
Alignment:
Q  50 tactccctccgtccctttatgtaggcatccattg 83  Q
    ||||||||||||||||| ||||||||||||||||    
T  5895691 tactccctccgtcccttaatgtaggcatccattg 5895724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 197399 - 197334
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagt 313  Q
    ||||||| |||||||||||||| |||||| ||  |||||| || ||||||||||||| |||| |||||    
T  197399 taataaaggcatctagtaatttaaaaagaagt--ttacatttaaggacaaaaataaagtcaaatgagt 197334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 5457278 - 5457334
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||| | |||| || |||||||||||||| ||||||| |||||||||||    
T  5457278 aatttgattttttaaatttcaaaacaagttagtagtattaattagaggtatgtttag 5457334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 11082162 - 11082198
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagta 217  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  11082162 aatttgaattttcatatttcaagacaagttagtagta 11082198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 16186661 - 16186705
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    ||||||||||||||||||| |||||||| |||| ||| |||||||    
T  16186661 aatttgacttttcatatttcaagacaagatagtggtattaattag 16186705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 31780224 - 31780272
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||| ||||||||||| ||||| |||| ||||||||||||||    
T  31780224 ttttcatttttcaagacaagttaatagtattaataaggggtatgtttag 31780272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 1927 - 1769
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  1927 aatttgacttttcatattgcaagacaaattagtagtattaattaggggtatgtttaggaaaaacataataaatgcatctagtaatttgaaaaggggt--t 1830  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    |||||  ||||||||||||||| |||| || |||||||||||||| || | ||||||||||    
T  1829 tacattgagggacaaaaataaagtcaaatgggtgcttagatatagggatggagggagtatt 1769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 19236081 - 19235921
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnnt--aataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||  ||     
T  19236081 aatttgatttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaataaataaataaatgcatctagtaatttgaaaaggagt- 19235983  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
     |||||| |||||||||||||||| |||| ||||||||||||||||| |||| ||| ||||||    
T  19235982 -ttacatttagggacaaaaataaagtcaaatgagtgcttagatatagggacggaggaagtatt 19235921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 48767656 - 48767812
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||         ||||||||||||||||||||||||| |  ||  |    
T  48767656 aatttgacttttcatatttcaagacatgttattagtattaattaggggtatgtttaggaaaaaataaataaatgcatctagtaatttgaaagggggt--t 48767753  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || | |||||||||||| |||| ||||||||    
T  48767754 tacatttagggacaaaaataaaatcaaatgggggcttagatatagggacggagggagta 48767812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 4089514 - 4089359
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||        |||||||||||||||||||||| ||||   ||  |    
T  4089514 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttag-gaaaaaataataaatgcatctagtaattttaaaaagagt--t 4089418  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || ||| |||||||||| |||| ||||||||    
T  4089417 tacatttagggacaaaaataaaatcaaatgggtgtttagatatagggacggagggagta 4089359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 1324799 - 1324954
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||        |||||||| ||||||||||||||||| |  ||  |    
T  1324799 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttag-gaaaaaataataaattcatctagtaatttgaaagggggt--t 1324895  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||||||||||||||||| || || | |||||||||||| |||  ||||||||    
T  1324896 tacatttagggacaaaaataaaataaaatgggggcttagatatagggacagagggagta 1324954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 10685176 - 10685331
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||  ||||| || |||||| ||||| ||||||        ||||||||||||||||||||||||||||  ||  |    
T  10685176 aatttgacttttcatatttcaagacaaaatagtaatattaattatgggtacgtttagaaaaaaa-taataaatgcatctagtaatttgaaaaggggt--t 10685272  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||  |||| ||||||||    
T  10685273 tacatttagggacaaaaataaaatcaaatgagtgcttagatataaggacggagggagta 10685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 181 - 330
Target Start/End: Original strand, 26632937 - 26633084
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||| ||       
T  26632937 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaagtaataataaatgcatctagtaatttgaaaagaagtc-- 26633034  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| ||||    
T  26633035 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacg 26633084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 35128475 - 35128617
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| |||||||| |  ||||| |||||||||||||||||| |        ||||||||||||||||||||||||||||| ||      
T  35128475 aatttgaattttcatatttcaagacaagatgatagtattaattaggggtatgtttaagaaaaaaaataataaatgcatctagtaatttgaaaagaggt-- 35128572  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||    
T  35128573 ttacatttagggacaaaaataaaatcaaatgagtgcttaaatata 35128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 18122056 - 18121901
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||  ||||||||||        |||||||||||||||||||||| |||||  ||  |    
T  18122056 aatttgacttttcatatttcaagataagttagtagtattaattagacgtatgtttag-gaaaaaataataaatgcatctagtaatttaaaaag-ggt--t 18121961  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| |||||||||||||||| |||| || ||||||| |||||| |||| |||||||||    
T  18121960 tacatttagggacaaaaataaagtcaaatgcgtgcttacatatagggacggagggagtat 18121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 330
Target Start/End: Original strand, 21388333 - 21388480
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| |||| |||||||||||| ||||||  |||||||||||        ||||||||||||||||||||||| ||||  ||  |    
T  21388333 aatttgacttttcaaattttaagataagttagtagtattaattaatggtatgtttaggaaaaaaataataaatgcatctagtaatttggaaaggggt--t 21388430  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||| ||| ||||||||||||||||| || ||||||| |||||| ||||    
T  21388431 tacatttagagacaaaaataaaatcaaatgggtgcttaaatatagggacg 21388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 29636047 - 29635914
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatcta 288  Q
    ||||||||||| |||||||||||||||||||| |||||| | |||||||        ||||||||||||||| |||||||||||  || | |||||| ||    
T  29636047 ttttcatatttcaagacaagttagtagtactacttagggatctgtttaggaaaaaaataataaatgcatctaataatttgaaaa--tggatttacattta 29635950  T
Q  289 gggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    |||||||||||||| |||  || |||||||||||||    
T  29635949 gggacaaaaataaagtcacatgggtgcttagatata 29635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 33181386 - 33181541
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| |||||||||| || |||||||||||||| || |||||||| |||||||||         ||||||||||||||| |||||||||| | |    |    
T  33181386 aatttaacttttcatactttaagacaagttagtaatattaattaggagtatgtttaagaaaaaattaataaatgcatctaataatttgaaagggt----t 33181481  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || ||||||||||||| |||| ||||  |||||||||||||||| || ||||||    
T  33181482 tacatttatggacaaaaataaagtcaaatgaggacttagatatagagacggagagagtat 33181541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 13907757 - 13907701
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  13907757 aatttgacttttcatatttaaagacaagttagtagtattaattaggggtgtgtttag 13907701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 21759811 - 21759967
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa-agatgtaa 279  Q
    ||||| ||||||| ||||| ||||||| ||||||| | |||||| ||||||||||||        |||||||||||||||||||||||||| ||| ||      
T  21759811 aatttaacttttcgtatttcaagacaaattagtaggattaattacgggtatgtttaggaaaaaagtaataaatgcatctagtaatttgaaataga-gt-- 21759907  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||| |||||||||| |||||||||| ||  | |||| |||||| |||| ||||||||    
T  21759908 ttacatttagggacaaacataaaatcaaatggattcttacatatagggacggagggagta 21759967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 36726188 - 36726044
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag--nnnnnnnntaataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||          ||||||||||||||||||||||||||   ||      
T  36726188 aatttgacttttcatatttcaaaacaagttggtagtattaattaggggtaagtttaggaaaaaaaaataataaatgcatctagtaatttgaaa--gtggg 36726091  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
     |||||| ||| ||||||||||||||||| || | ||||||||||||    
T  36726090 tttacatttagagacaaaaataaaatcaaatgggggcttagatatag 36726044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 2276591 - 2276437
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||||| |||| |||| |||||| ||||| |||||| ||||||||||||         || |||||  |||||||||||||||||   |  |    
T  2276591 aatttgacttttcaaatttcaagataagttactagtattaattaagggtatgtttaggaagaaa--aaaaaatgtgtctagtaatttgaaaagcgat--t 2276496  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| ||||||||    
T  2276495 tacatttagggacaaaaataaaatcaaatgggtgcttatatatagggacggagggagta 2276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 21809661 - 21809606
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  21809661 aatttgacttttcatatttcaaaacaagttagtagtattaattaggggtatgttta 21809606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 48610150 - 48610059
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||||||| |||| ||| ||||||||| |||||||||        ||||||||||||||||||||||||||||    
T  48610150 aatttgacttttcatatttcaagacaagatagtggtattaattagggatatgtttag-aaaaaaataataaatgcatctagtaatttgaaaag 48610059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 40741043 - 40741099
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  40741043 aatttgacttttcatatttcaagataagttagcagtattaattaggggtatgtttag 40741099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 42983628 - 42983572
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||    
T  42983628 aatttgacttttcatatttcaagacaagttagtagtattaattaatggtatgtttag 42983572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 37673828 - 37673952
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| || || || |||||||||| |||||||         |||||||| ||||||||||||| |||||  ||  |    
T  37673828 aatttgacttttcatatttcaagacaagataataatattaattaggggcatgtttaagaaaaaaataataaatacatctagtaatttaaaaaggagt--t 37673925  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| ||| |||||||||||||||||    
T  37673926 tacatttagagacaaaaataaaatcaa 37673952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 20124362 - 20124419
Alignment:
Q  282 acatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||| ||||||||||||||||||||| |||||||||| |||||| |||| ||||||||    
T  20124362 acatttagggacaaaaataaaatcaaatgagtgcttaaatatagggacggagggagta 20124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 49100762 - 49100924
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaa---taaatgcatctagtaatttgaaaagatgt 277  Q
    ||||||||||||||||||| |||| ||  || || || |||||||||||||||||||        |||   ||||||||| ||||||||| |||||  |     
T  49100762 aatttgacttttcatatttcaagataaaataataatattaattaggggtatgtttaggaaaaaaataaaaataaatgcatatagtaatttaaaaaggggg 49100861  T
Q  278 aattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
      |||||  ||||||||||||||||||||| || |||||||||||||  |||||||||| ||||    
T  49100862 t-ttacaattagggacaaaaataaaatcaaatgggtgcttagatatatggacgaagggattatt 49100924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 25750459 - 25750515
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| |||||||| ||||| || |||||||||||||||||||    
T  25750459 aatttgatttttcatatttcaagacaaggtagtaatattaattaggggtatgtttag 25750515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 273
Target Start/End: Complemental strand, 27162909 - 27162825
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||| ||||||||||| ||||| |||||||  ||||||||||        |||||||||||| |||||||||||||||    
T  27162909 ttttcatatttcaagacaagttaatagtattaattagaagtatgtttaggaaaaaaataataaatgcatttagtaatttgaaaag 27162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 28663846 - 28663902
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||| |||||||| |||| || ||||||||| |||||||||||||||||||    
T  28663846 aatttgacttctcatatttcaagataaattagtagtattaattaggggtatgtttag 28663902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 10408582 - 10408527
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||| ||||||||||| ||  ||||||||||||| ||||||||||||||||||    
T  10408582 aatttgatttttcatatttcaatgcaagttagtagtattaattaggggtatgttta 10408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 40263802 - 40263857
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| |||| ||| |||||||| ||||||||| ||||||||    
T  40263802 aatttgacttttcatatttcaagataagatagtagtattaattagggctatgttta 40263857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 39102793 - 39102739
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt 235  Q
    |||||||||||| |||||  ||||||||||||||||| ||||||||| |||||||    
T  39102793 aatttgactttttatattccaagacaagttagtagtattaattagggttatgttt 39102739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 48193706 - 48193763
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaatta-ggggtatgtttag 237  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||| |||||||||||||    
T  48193706 aatttgacttttcatatttcaagacaaattagttgtattaattagggggtatgtttag 48193763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 19477223 - 19477167
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||| ||| |||||    
T  19477223 aatttgacttttcatatttcaagataaattagtagtattaattagggatatatttag 19477167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 35960469 - 35960525
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagt-agtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| |||||| ||||||  ||| ||||||||||||||||||    
T  35960469 aatttgacttttcatatttcaagacaggttagtgtgtattaattaggggtatgttta 35960525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 37136272 - 37136328
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| |||||||   || |||||||||||||||||||    
T  37136272 aatttgacttttcatattttaagataagttagcgatattaattaggggtatgtttag 37136328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 37491633 - 37491577
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| ||| ||| || ||| || |||||||||||||||||||    
T  37491633 aatttgacttttcatatttcaaggcaaatttgtaatattaattaggggtatgtttag 37491577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 46783855 - 46783811
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||    
T  46783855 aatttgacttttcatatttcaagataagttagtagtattaattag 46783811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 25829104 - 25829147
Alignment:
Q  194 atatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||| ||||||||||| || ||||||||||||||||||||||    
T  25829104 atatttcaagacaagttattaatactaattaggggtatgtttag 25829147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 27170102 - 27170157
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| ||||||| ||| ||||| |||||| | |||||||||    
T  27170102 aatttgacttttcatatttcaagacaaattaatagtattaattatgagtatgttta 27170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 28038902 - 28038815
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttg 268  Q
    ||||| ||||||||||||| |||||||||||| |||| |||||| |  |||||||||        |||||||| ||||||||||||||    
T  28038902 aatttaacttttcatatttcaagacaagttagcagtattaattatgaatatgtttaggaaaaacataataaatacatctagtaatttg 28038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 8318689 - 8318740
Alignment:
Q  248 ataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataa 301  Q
    ||||||||||||||||||||||||||  ||  |||||| |||||||||||||||    
T  8318689 ataaatgcatctagtaatttgaaaaggggt--ttacatttagggacaaaaataa 8318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 43601107 - 43601040
Alignment:
Q  256 atctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||||||||||||||||||  ||  |||||| || ||||||||||||| |||| |||||||||| ||||||    
T  43601107 atctagtaatttgaaaagtggt--ttacatttatggacaaaaataaagtcaaatgagtgcttaaatatag 43601040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 29723552 - 29723693
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || ||||| |||||||| |||||||  |||| ||||         ||||||||||||||||||||||  ||| ||| | |    
T  29723552 aatttgacttttcatatttcaacacaagatagtagtattaattagaagtatattta-agaaaaaataataaatgcatctagtaattt--aaaaatggatt 29723648  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    || || ||  |||||||||||||| || ||| || ||||||||||    
T  29723649 tatatttaaagacaaaaataaaattaaatgaatgtttagatatag 29723693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 37048126 - 37048216
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||| ||| ||||||||| || |||||||||||||| |||||| ||||||||||||         || |||||||||||||||||||||||||    
T  37048126 aatttaactattcatatttcaatacaagttagtagtattaatta-gggtatgtttagaaagaaa--aaaaaatgcatctagtaatttgaaaaga 37048216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 43601179 - 43601146
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagta 214  Q
    ||||||||||||||||||| ||||||||||||||    
T  43601179 aatttgacttttcatatttcaagacaagttagta 43601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 26200982 - 26200938
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    ||||| ||||||||||||| || |||||||||||||| |||||||    
T  26200982 aatttaacttttcatattttaaaacaagttagtagtattaattag 26200938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 48832875 - 48832831
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    ||||||||||||||||||| |||| |||||| ||||| |||||||    
T  48832875 aatttgacttttcatatttcaagataagttactagtattaattag 48832831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 39690499 - 39690342
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  39690499 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 39690402  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| |||||||||    
T  39690401 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagtat 39690342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 35569018 - 35568871
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||  ||  |    
T  35569018 aatttgacttttcatatttcaagacaaattagtagtactaattaggggtatgtttaggaaaataataataaatgcatttagtaatttgaaaaggggt--t 35568921  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacg 330  Q
    ||||  |||||||||||||||||| || ||  ||||||||||||| ||||    
T  35568920 tacaattagggacaaaaataaaattaaatggatgcttagatatagggacg 35568871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 27925302 - 27925371
Alignment:
Q  15 agatacacaaggatacttacatgatacttcatagatactccctccgtccctttatgtaggcatccattgc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27925302 agatacacaaggatacttacatgatacttcatagatactccctccgtccctttatgtaggcacccattgc 27925371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 4738721 - 4738878
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||        |||||||||||||||||||||| |||||| |   |    
T  4738721 aatttgacttttcatatttcaagacaagttagtagtattagttaggggtatgtttag-gaaaaattaataaatgcatctagtaattt-aaaaga-gagtt 4738817  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||| |||||||||||||||| |||  || | |||||||||||| |||||||||||||||    
T  4738818 tacatttagggacaaaaataaactcagatgggggcttagatatagggacgaagggagtatt 4738878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 9946371 - 9946214
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    |||| ||||||| |||||| |||||||| |||||||| |||||||||||||||||||         ||||||||||||||| |||||||||||||   ||    
T  9946371 aattcgactttttatatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaaataataaatgcatctaataatttgaaaagag--aa 9946274  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    |||||| ||||||||||||||||||||| || ||| | |||||||| ||||||||||||||    
T  9946273 ttacatttagggacaaaaataaaatcaaatg-gtgttaagatatagggacgaagggagtat 9946214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 21912213 - 21912370
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaatta 282  Q
    ||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        |||||||||||||| |||||||||||||  ||  |||    
T  21912213 tttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatcttgtaatttgaaaaggagt--tta 21912310  T
Q  283 catctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    ||| ||||||||||||||||||||| || ||||||| ||||||||| | | |||||||||    
T  21912311 catttagggacaaaaataaaatcaaatgggtgcttatatatagagatggaaggagtatta 21912370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 3559040 - 3558883
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||||||||| | |||| ||||||||||||        ||||||||||||||||||||||||||||| |   |    
T  3559040 aatttgacttttcatatttcaagataagttagtagtatttattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagagg--gt 3558943  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    || || |||||||||||||||||| || |  |||| ||||||||| || | |||||||||    
T  3558942 tatatttagggacaaaaataaaataaaataggtgcctagatatagggatggagggagtat 3558883  T

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Target: chr5; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 27642593 - 27642749
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| |||| || ||||||| | |||||| ||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  27642593 aatttgactttttgtatttcaagataaattagtaggattaattaagggtatgtttagaaaaataataataaatgcatctagtaatttgaaaaggagt--t 27642690  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || || |||||||||||||||||| |||||||||| |||||| |||| ||||||||    
T  27642691 tatatttatggacaaaaataaaatcaaatgagtgcttacatatagggacggagggagta 27642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 29866280 - 29866373
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||        | ||||||||||||||||| |||||||||    
T  29866280 aatttgacttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaattataaatgcatctagtaacttgaaaaga 29866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 5151213 - 5151085
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||        | | |||||||||||||||||| ||| |  ||  |    
T  5151213 aatttgacttttcatatttcaagacaagttagtagtactaatta-gggtatgtttaggaaaaaattgacaaatgcatctagtaatttcaaagggagt--t 5151117  T
Q  281 tacatctagggacaaaaataaaatcaagtgag 312  Q
    ||||| ||||||||||||||||||||| ||||    
T  5151116 tacatttagggacaaaaataaaatcaaatgag 5151085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 25690597 - 25690508
Alignment:
Q  250 aaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||||||||||||| ||||||||  ||  |||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  25690597 aaatgcatctagtaagttgaaaaggggt--ttacatttagggacaaaaataaaatcaaatgggtgcttagatatagggacgaagggagtatt 25690508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 25017687 - 25017526
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctag---taatttgaaaagatgt 277  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||        |||||||||||| |||   |||||||||| |  ||    
T  25017687 aatttgacttttcatattttaagacaagttaatagtattaattaggggtatatttaggaaaaaaataataaatgcatatagtaataatttgaaagggggt 25017588  T
Q  278 aattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
      |||||| || ||||||||||||| |||| ||| ||||||||||||| |||| || |||||||    
T  25017587 --ttacatttaaggacaaaaataaagtcaaatgaatgcttagatatagggacggagagagtatt 25017526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 5845267 - 5845430
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||        ||||||||||||||| ||||||| ||||| | | |    
T  5845267 aatttgacttttcatatttcaatacaagttagtagtattaattaggagtatgtttaggaaaaaattaataaatgcatctaataatttg-aaaga-ggatt 5845364  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtattagtta 346  Q
    ||||| |||  ||||||||||| |||| |||  |||| ||||||| |||| || |||||| |||||    
T  5845365 tacatttagaaacaaaaataaagtcaaatgaaggcttcgatatagggacggagagagtataagtta 5845430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 8717972 - 8717879
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  8717972 aatttgacttttcatatttcaagacaagttcgtattattaattaggggtatgtttaggaaaaaaataataagtgcatctagtaatttgaaaaga 8717879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 36177383 - 36177541
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| || ||||   ||||||| |||||| ||||||||||||         |||||||| ||||||||||||||||||  || |     
T  36177383 aatttgacttttcatatttcaaaacaaaaaagtagtattaattaagggtatgtttaggaaaaaaaataataaatacatctagtaatttgaaaa--tgaat 36177480  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    |||||| ||||||||||||||||||||| ||  ||||||||||||  |||| |||||||||    
T  36177481 ttacatttagggacaaaaataaaatcaaatggatgcttagatatatggacggagggagtat 36177541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 20946178 - 20946270
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||        |||||||||| ||||||||||| |||||    
T  20946178 aatttgacttttcatatttcaaaacaagttagtagtactaattaggagtatgtttagcaaaaaaataataaatgcgtctagtaatttaaaaag 20946270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 27925395 - 27925520
Alignment:
Q  212 gtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtga 311  Q
    |||||||||||||||| |||||||||        ||||||||||||||||||||||||||||  | | |||||| |||||||||||||||| |||| ||     
T  27925395 gtagtactaattagggatatgtttagaaaaaaaataataaatgcatctagtaatttgaaaag--ggatttacatttagggacaaaaataaagtcaaatgg 27925492  T
Q  312 gtgcttagatatagagacgaagggagta 339  Q
    | ||||||||| || |||| ||||||||    
T  27925493 gggcttagatacagggacggagggagta 27925520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 36347614 - 36347490
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||| |||||||||        ||||||||||||||| |||||||||||||   | |    
T  36347614 aatttgactattcacatttcaagacaagttagtaatattaattagggatatgtttaggaaaaaggtaataaatgcatctaataatttgaaaaga--aatt 36347517  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| || ||||||||||||||||||    
T  36347516 tacatttatggacaaaaataaaatcaa 36347490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 38972140 - 38971985
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||| |||||||||||| |||||| ||||||||||||        ||||||||||||||| ||||||||||||  ||  |    
T  38972140 aatttgactttttatatttcaagataagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctattaatttgaaaaggggt--t 38972043  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || |||||| ||||||||| |||| |  ||||||||||||||  ||| ||||||||    
T  38972042 taaatttaggga-aaaaataaagtcaaatatgtgcttagatataggaacggagggagta 38971985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 16128 - 16039
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaa 270  Q
    |||||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||        |||||||||||||||||||||||||    
T  16128 aatttgacttttcacatttcaagacaagttagtagtattaaccaggggtatgtttaggaaaataataataaatgcatctagtaatttgaa 16039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 31641205 - 31641044
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag--nnnnnnnntaataaatgcatctagtaatttgaaaagatgta 278  Q
    |||||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||          |||||||| ||||||||||||||||||||   |    
T  31641205 aatttgacttttcaaatttcaagataagttagtggtattaattaggggtatgtttagaaaaaaataataataaatacatctagtaatttgaaaaga--ga 31641108  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
     ||| || |||||||||||||||| ||||  ||||| ||| |||||  |||| |||||||||||    
T  31641107 tttaaatttagggacaaaaataaagtcaaacgagtgtttacatataaggacggagggagtatta 31641044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 7736071 - 7736163
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| |||| ||||||| |||| ||||||||| |||||||||        |||||||||| |||||||||||||||||    
T  7736071 aatttgacttttcatatttcaagataagttagcagtattaattagggatatgtttaggaaaaaaataataaatgcgtctagtaatttgaaaag 7736163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 10523287 - 10523144
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag---nnnnnnnntaataaatgcatctagtaatttgaaaagatgt 277  Q
    ||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||           ||||||||||||||| |||||||||||  |      
T  10523287 aatttgactatttatatttcaagacaagttagtagtattaattaggggtatgtttagagaaaaaataataataaatgcatctaataatttgaaaaagt-- 10523190  T
Q  278 aattacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
      |||||| || ||||||||||||| |||| || ||||||||||||||    
T  10523189 --ttacatttatggacaaaaataaagtcaaatgggtgcttagatatag 10523144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 40979225 - 40979169
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  40979225 aatttgacttttcatatttaaagacaagatagtagtattaattaggggtatgtttag 40979169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 36750789 - 36750665
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| || ||||||||| |||| |||||| |||||| |||||         |||||||||||||||||||||||||||  ||  |    
T  36750789 aatttgactttttatatttcaaaacaagttagcagtattaattaagggtatatttagggaaaaaaaaataaatgcatctagtaatttgaaaaggcgt--t 36750692  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    || || |||||||||||||||||||||    
T  36750691 tatatttagggacaaaaataaaatcaa 36750665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 20975752 - 20975662
Alignment:
Q  247 aataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||||||||||||||||||||||||  ||  |||||| || | |||||||||||||||| |||||| |||||| |||||||| | ||||||    
T  20975752 aataaatgcatctagtaatttgaaaaggagt--ttacatttaagaacaaaaataaaatcaaatgagtgtttagatgtagagacggatggagta 20975662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 4857507 - 4857452
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||    
T  4857507 aatttgacttttcatattttaagataagttagtagtattaattaggagtatgttta 4857452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 7510695 - 7510786
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||||| ||||||||||||||||||  ||  |||||| ||||||||| |||||| |||| |||||| ||| |||||| |||| ||||||||    
T  7510695 taataaatgtatctagtaatttgaaaaggcgt--ttacatttagggacaataataaagtcaaatgagtgtttacatatagggacggagggagta 7510786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 11980807 - 11980863
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||| | |||||||||    
T  11980807 aatttgacttttcatattttaagacatgttagtagtattaattagagatatgtttag 11980863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 14044511 - 14044455
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||| ||| |||||    
T  14044511 aatttgacttttcatatttgaagataagttagcagtattaattagggatatatttag 14044455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 21574894 - 21574838
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||| |||||||| ||| |||||||||| |||||| |||||||||||||||||||    
T  21574894 aatttgtcttttcatgtttcaagacaagtttgtagtattaattaggggtatgtttag 21574838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 32401467 - 32401312
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| ||||||||||| |||||||||| |||||| |||||||| || || ||||        |||||||||  |||||||||||||||||| ||  |    
T  32401467 aatttgatttttcatattttaagacaagttggtagtattaattaggagtgtgcttaggaaaataataataaatgtttctagtaatttgaaaaga-gt--t 32401371  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    | ||| |||||||||||||||| |||| || | | || ||||||| |||| |||||||||    
T  32401370 tgcatttagggacaaaaataaagtcaaatg-ggggtttgatatagggacgtagggagtat 32401312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 34877757 - 34877914
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||| ||| |||||||||| |||||| |||||||| |||| |||||        |||||||||||| || |||||| ||| |  | | |    
T  34877757 aatttgacttttcatttttcaagacaagtttgtagtattaattaggagtatatttaggaataaaataataaatgcatataataatttaaaagg--ggatt 34877854  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || |||||||||||||||||| ||     ||| ||||||||||| |||||||||    
T  34877855 tacatttatggacaaaaataaaatcaaatggagatttatatatagagacggagggagtat 34877914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 42644491 - 42644435
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||| |||||||||||| ||||||||||||| ||| |||||| ||||||||||||    
T  42644491 aatttgtcttttcatatttcaagacaagttagttgtattaattaagggtatgtttag 42644435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 30348090 - 30348036
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  30348090 aatttgacttttcatatttcaaggcaagttagtagtattaatta-gggtatgttta 30348036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 15967071 - 15966942
Alignment:
Q  206 aagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatc 305  Q
    |||||||||||| ||||||||||||| ||||         ||||||||||||||||||||||| ||||| ||  |||||| |||||||||||||||| |     
T  15967071 aagttagtagtattaattaggggtatctttaagaaaaaaataataaatgcatctagtaatttg-aaagaggt--ttacatttagggacaaaaataaagtt 15966975  T
Q  306 aagtgagtgcttagatatagagacgaagggagta 339  Q
    || | || |||||  |||||||||| ||||||||    
T  15966974 aaat-agggcttatctatagagacggagggagta 15966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 129699 - 129837
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaatta-ggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||| ||||||||| |||        |||||||||||||||||||||| ||||   ||      
T  129699 aatttgatttttcatattttaagacaagttaatagtattaattagggggtatgtatag----gaaataataaatgcatctagtaatttaaaaaatggt-- 129792  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||| || ||| |||||||||||| |||| ||| |||||| |||||    
T  129793 ttatatgtagagacaaaaataaagtcaaatgaatgcttaaatata 129837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 3247287 - 3247231
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |||| ||| | |||||| ||||||||||||| |||||    
T  3247287 aatttgacttttcatatttcaagaaaagattgtagtattaattaggggtatatttag 3247231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 10656681 - 10656768
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttga 269  Q
    ||||||||||||||||||| || | ||||||| |||| |||||| ||||||||||||        ||||||||||||||| ||||||||    
T  10656681 aatttgacttttcatatttcaacataagttagcagtattaatta-gggtatgtttaggaaaaaattaataaatgcatctaataatttga 10656768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 27798249 - 27798297
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtat 231  Q
    ||||||||||||||||| ||||||||||| | ||| |||||||||||||    
T  27798249 tttgacttttcatatttcaagacaagttattggtattaattaggggtat 27798297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 29874257 - 29874305
Alignment:
Q  189 ttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||| || |||||||| ||||| |||||||||||||||||||    
T  29874257 ttttcatatttcaaaacaagttattagtattaattaggggtatgtttag 29874305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 12895123 - 12895036
Alignment:
Q  250 aaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    |||| |||||| ||| ||||||||| ||  |||||| || ||||||||||||||| || ||| ||||||||||||| |||| |||||||||    
T  12895123 aaatacatctaataagttgaaaagaggt--ttacatttaaggacaaaaataaaattaaatga-tgcttagatatagggacggagggagtat 12895036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 30317840 - 30317886
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggg 227  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||||    
T  30317840 aatttgacttttcatatttcaatgcaagttagtagtattaattaggg 30317886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 32068077 - 32068131
Alignment:
Q  181 aatttgacttttcatatttgaagac-aagttagtagtactaattaggggtatgtt 234  Q
    ||||||||||||||||||| ||||| |||||||||||| ||| || |||||||||    
T  32068077 aatttgacttttcatatttcaagacaaagttagtagtattaagtaagggtatgtt 32068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 16969465 - 16969550
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatt 266  Q
    ||||||| |||| |||||| ||||||| |||||| || ||||||| |||||||||||        |||||||||||| ||||||||    
T  16969465 aatttgaattttaatattttaagacaatttagtaatattaattagaggtatgtttagaaaaataataataaatgcatttagtaatt 16969550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 18729683 - 18729776
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    ||||||||||||||||||| ||   || ||| ||||| |||||||||||||||||| |        ||||||||||||||| ||||||||||||    
T  18729683 aatttgacttttcatatttcaaattaaattaatagtattaattaggggtatgtttaggaaaaataataataaatgcatctaataatttgaaaag 18729776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 43060151 - 43060087
Alignment:
Q  259 tagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    |||||||||||||||  ||  |||||| ||||||||||||||||||||| ||  ||||||||||||    
T  43060151 tagtaatttgaaaaggagtt-ttacatttagggacaaaaataaaatcaaatggatgcttagatata 43060087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 600856 - 600912
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||| |||||| |||||||||||||| || ||||||||  |||||||||    
T  600856 aatttgattttttatattttaagacaagttagtaatattaattaggattatgtttag 600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 12895222 - 12895166
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||| | |||| ||||||||||||| ||| ||||||| |||||||||||    
T  12895222 aatttgattttttaaattttaagacaagttagttgtattaattagaggtatgtttag 12895166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 25690684 - 25690644
Alignment:
Q  196 atttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    |||| ||||||||||||| ||| ||||||||||||||||||    
T  25690684 atttcaagacaagttagttgtattaattaggggtatgttta 25690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 43454073 - 43454129
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||||| |||| ||||||||||||| ||| ||||| ||| |||||||||    
T  43454073 aatttgatttttcaaatttcaagacaagttagtggtattaattcgggatatgtttag 43454129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 534556 - 534713
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| || ||||| ||||||||||||| |||||         |||||||||||||||||||||||||||| ||  |    
T  534556 aatttgacttttcatatttcaagacaagataatagtattaattaggggtatatttaggaaaaaaaaaataaatgcatctagtaatttgaaaagaggt--t 534653  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| || |||||||||||||||||| ||  |||||| ||||||||||| |||||||||    
T  534654 tacatttaaggacaaaaataaaatcaaatggatgcttaaatatagagacggagggagtat 534713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 17663715 - 17663871
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  17663715 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 17663812  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| ||||||||    
T  17663813 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 17663871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 20362073 - 20362229
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        ||||||||||||||||||||||||||||  ||  |    
T  20362073 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagt--t 20362170  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| |||| ||||||||    
T  20362171 tacatttagggacaaaaataaaatcaaatgggtgcttacatatagggacggagggagta 20362229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 41865806 - 41865962
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||||||||||||| || | |||||||||||||||||        ||||||||||||||| |||||||||||| |||  |    
T  41865806 aatttgactttttatattttaagacaagttagtaatatttattaggggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaaggtgt--t 41865903  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||| |||||||||||||||| |||||||||| |||||| |||| | ||||||    
T  41865904 tacatttaggaacaaaaataaaatcaaatgagtgcttaaatatagggacggatggagta 41865962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 28733914 - 28734070
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| |||| || ||||||||| |||||||||||||||||||        |||||||||||| |||||||||||||||| ||  |    
T  28733914 aatttgactttttatatttcaagataaattagtagtattaattaggggtatgtttaggaaaacaataataaatgcatatagtaatttgaaaagaggt--t 28734011  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || |||||||||||||||| |||| || |||||||||||||| |||| | ||||||    
T  28734012 tagatttagggacaaaaataaagtcaaatgggtgcttagatatagggacggatggagta 28734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 44424686 - 44424825
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||         ||||||||||||||||||||||||||   ||  |    
T  44424686 aatttgacttttcatatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaa--aataaatgcatctagtaatttgaaaaagggt--t 44424781  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| ||||||||||||||||||||| ||  ||||||||||||    
T  44424782 tacatttagggacaaaaataaaatcaaatggatgcttagatata 44424825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 27297668 - 27297824
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||        ||||||||||||||| ||||||||||||  ||  |    
T  27297668 aatttgacttttcatatttcaagacaagatagtagtattaattagggatatgtttaggaaaaaaataataaatgcatctactaatttgaaaaggagt--t 27297765  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| || |||||||||||||||||| |  || ||||||||||| || | ||||||||    
T  27297766 tacatttaaggacaaaaataaaatcaaattggtacttagatatagggatggagggagta 27297824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 27749580 - 27749699
Alignment:
Q  203 gacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaa 302  Q
    ||||||||||||||| |||||||||||||||||||        |||||||||||||| |||||||||||||  ||  |||||| ||||||||||||||||    
T  27749580 gacaagttagtagtattaattaggggtatgtttaggaaaaaagtaataaatgcatcttgtaatttgaaaaggagt--ttacatttagggacaaaaataaa 27749677  T
Q  303 atcaagtgagtgcttagatata 324  Q
    ||||| || |||||||||||||    
T  27749678 atcaaatgggtgcttagatata 27749699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 3237814 - 3237963
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||          || |||||||||||||||||| |||||  ||  |    
T  3237814 aatttgacttttcatatttcaagacaagatagtagtattaattagggatatgtttaaa--------aaaaaatgcatctagtaatttaaaaaggagt--t 3237903  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||||||||||||||||||||| ||  ||||||||||||| ||||||| ||||||    
T  3237904 tacatttagggacaaaaataaaatcaaatggatgcttagatatagggacgaagagagtat 3237963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 24774956 - 24775112
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||        ||||||||  ||||||||||| |||||||   | |    
T  24774956 aatttgacttttcatatttcaagacaagttagtagtactaatcgggggtatgtttaggaaaaaaataataaatatatctagtaattcgaaaaga--gatt 24775053  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    || || ||||||||||||||||||||| ||  |||||| |||||| |||| || |||||    
T  24775054 taaatttagggacaaaaataaaatcaaatggatgcttaaatatagggacggagagagta 24775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 28264965 - 28264811
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnnt-aataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||| ||||||||| ||||||||||| || ||   |||||||||||||||||        | |||||||||||||||||||||||||||| ||      
T  28264965 aatttgactattcatatttcaagacaagttaatatta---attaggggtatgtttaggaaaaatattaataaatgcatctagtaatttgaaaagaggt-- 28264871  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||||  | |||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  28264870 ttacattaaaggacaaaaataaaatcagatgagtgtttagatatagagacggagggagta 28264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 15851622 - 15851775
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||| ||||||||||| |||||||  |||||||| |||||||||||||||||||         ||||||||||||||||||||||||||||  ||      
T  15851622 aatttgaattttcatatttcaagacaaaatagtagtattaattaggggtatgtttaggaaaaataataataaatgcatctagtaatttgaaaaggagt-- 15851719  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaaggga 336  Q
    |||||| |||||| |||||||||||||| || | |||||||||||| |||| |||||    
T  15851720 ttacatttagggagaaaaataaaatcaaatg-gggcttagatatagggacggaggga 15851775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 7278627 - 7278486
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||| || |||||| |||| |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||  | | |    
T  7278627 aatttgactattaatatttcaagataagttagtagtattaattaggggtatgtttaagaaaataataataaatgcatctagtaatttgaaaag--ggatt 7278530  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| ||| || |||||||||||||| |  |||||||||||||    
T  7278529 tacatttagagataaaaataaaatcaaattggtgcttagatata 7278486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 31644456 - 31644316
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| |||||||| || |||| ||  |||||||| |||||||||||||||||||        |||||||||||||||||||||||||||   ||  |    
T  31644456 aatttgatttttcataattcaagataaaatagtagtattaattaggggtatgtttaggaaaaaa-taataaatgcatctagtaatttgaaaatgagt--t 31644360  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| ||||||||||||||||||||| || |||||||||||||    
T  31644359 tacatttagggacaaaaataaaatcaaatgggtgcttagatata 31644316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 247751 - 247910
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||| | ||||||||||||||||| | |||| |||||||| |||        |||||| |||||||| ||||||||||||  ||  |    
T  247751 aatttgacttttcatatctcaagacaagttagtagtattgattaagggtatgtgtagggaaaaaataataattgcatctactaatttgaaaaggagt--t 247848  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    ||||| ||| || |||| |||| |||| || |||||||||||||| |||| |||||||||||    
T  247849 tacatttagagataaaactaaagtcaaatgggtgcttagatatagggacggagggagtatta 247910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 183 - 340
Target Start/End: Complemental strand, 8065084 - 8064930
Alignment:
Q  183 tttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaatta 282  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||         |||||||| |||||||||||||||| |  ||  |||    
T  8065084 tttgatttttcatatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaatg-aataaatgtatctagtaatttgaaagggggt--tta 8064988  T
Q  283 catctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||| ||||||||| |||||| |||| || | ||||| |||||| |||| |||||||||    
T  8064987 catttagggacaataataaagtcaaatgggggcttaaatatagggacggagggagtat 8064930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 13534496 - 13534586
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||        ||||||| ||||||||||||||||||    
T  13534496 aatttgacttttcatatttcaagacaagttagtagtattaattagggatatgtttaggaaaaaattaataaacgcatctagtaatttgaaa 13534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 37355127 - 37355270
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn-taataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||         ||||||||||||||||||||||||||||  ||      
T  37355127 aatttgacttttcatatttcaagacaagataaaagtattaattaagggtatgtttaggaaaataaataataaatgcatctagtaatttgaaaaggggt-- 37355224  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatag 325  Q
    ||| || ||| ||||||||||||||||| || ||||||||||||||    
T  37355225 ttatatttagagacaaaaataaaatcaaatgggtgcttagatatag 37355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 41665801 - 41665957
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa-agatgtaa 279  Q
    ||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||         |||||| |||||||||||||||||| ||| ||      
T  41665801 aatttaacttttcatatttcaagacaagttaatagtattaattaggggtatgtttaggaaaaaa--aataaaagcatctagtaatttgaaagaga-gt-- 41665895  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    |||||| |||||||||||||||| |||| || | |||||||||||| |||| ||| ||||||    
T  41665896 ttacatttagggacaaaaataaagtcaaatgggagcttagatatagggacggaggaagtatt 41665957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 40346095 - 40345934
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-----gnnnnnnnntaataaatgcatctagtaatttgaaaagat 275  Q
    ||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||     |        ||||||||| ||||||||||||||||||      
T  40346095 aatttgacttttcatatttcaaggcaagtttgtagtattaattaggggtatgtttaggaaggaaaaaaaataataaatgtatctagtaatttgaaaagga 40345996  T
Q  276 gtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||  |||||| |||| ||||||||||||| || |||||| |||||||||| |||| || |||||    
T  40345995 gt--ttacatttaggaacaaaaataaaataaaatgagtgtttagatatagggacggagagagta 40345934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 14420767 - 14420923
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| |||||||| |||| |||||| |||| ||||| |||||||| ||||||||||        |||||||||||||||||||| |||||||| ||  |    
T  14420767 aatttaacttttcaaatttcaagacatgttattagtattaattaggagtatgtttaggattaaaataataaatgcatctagtaatctgaaaagaggt--t 14420864  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||  ||||||||||| |||| ||| |||||| |||||  |||| ||||||||    
T  14420865 tacatttagaaacaaaaataaagtcaaatgaatgcttaaatataaggacggagggagta 14420923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 23464774 - 23464928
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||| | |||         ||||||||||||||||||||| ||||||   | |    
T  23464774 aatttgacttttcatatttcaaaacaagttagtagtattaattaggggtatttgtagaaaaaata-aataaatgcatctagtaattt-aaaaga--gatt 23464869  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||||||||||||||| | || |||||| ||| ||||||||||| ||| ||||    
T  23464870 tacatttagggacaaaaataaagttaaatgagtgtttacatatagagacggaggtagta 23464928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 2048844 - 2048701
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||         ||||||||||||||| ||||||||||| |   | |    
T  2048844 aatttgactttttatatttcaagacaagttagtagtatttattaggggtatgtttaagaaaaaaataataaatgcatctaataatttgaaaaaa--gatt 2048747  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatataga 326  Q
    ||||| |||  |||||||||||||||| ||  |||||| |||||||    
T  2048746 tacatttagaaacaaaaataaaatcaaatggatgcttaaatataga 2048701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 7255692 - 7255782
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||        |||||||| |||||||||||||||||    
T  7255692 aatttgacttttcatatttcaagacaaattagtagtattaattagggatatgtttaggaaaataataataaatacatctagtaatttgaaa 7255782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 25731200 - 25731144
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25731200 aatttgatttttcatattttaagacaagttagtagtattaattaggggtatgtttag 25731144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 34330093 - 34330248
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| ||||||||||||| |||||||| |||||||| |||| |||| |||||||||         |||||||||||||||||||||||||||  ||  |    
T  34330093 aatttaacttttcatatttcaagacaagatagtagtattaatcagggatatgtttaggaaaaaa--aataaatgcatctagtaatttgaaaaggagt--t 34330188  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtat 340  Q
    ||||| ||  ||||||||||||||||| |   || |||||||||| |||| |||||||||    
T  34330189 tacatttatagacaaaaataaaatcaaatagatgtttagatatagtgacggagggagtat 34330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 45150691 - 45150598
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatt 341  Q
    ||||||||| |||||| |||||||||||  ||  |||||| ||||||||||||||||||||| |||||| ||| |||||| |||| ||||||||||    
T  45150691 taataaatgtatctagcaatttgaaaaggagt--ttacatttagggacaaaaataaaatcaaatgagtgattaaatatagggacggagggagtatt 45150598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 2131848 - 2131903
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  2131848 aatttgacttttcatatttaaagacaagttagttgtattaattaggggtatgttta 2131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 9718186 - 9718062
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    |||||| ||| || ||||| ||||||||||||||||| |||||| ||||||||||||        ||||||||||||||| |||||||||| | |||  |    
T  9718186 aatttgtcttatcgtatttcaagacaagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctaataatttgaaagggtgt--t 9718089  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| |||  ||||||||||||||||    
T  9718088 tacatttagaaacaaaaataaaatcaa 9718062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 328
Target Start/End: Original strand, 11071759 - 11071905
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnn--taataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| || ||| ||||||| || |||||||||| ||||||||          ||||||||||||||||||||||||||||  ||     
T  11071759 aatttgacttttcatatttcaaaaca-gttagtaatattaattaggggcatgtttaggaaaaaataataataaatgcatctagtaatttgaaaaggagt- 11071856  T
Q  279 attacatctagggacaaaaataaaatcaagtgagtgcttagatatagaga 328  Q
     ||| || |||||||||||||||| |||| |||||| ||| |||||||||    
T  11071857 -ttagatttagggacaaaaataaagtcaaatgagtgtttaaatatagaga 11071905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 2521314 - 2521221
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaaga 274  Q
    ||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||        |||||||||||||||| ||||||||||||    
T  2521314 aatttgactttttgtatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagcaatttgaaaaga 2521221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 44274533 - 44274440
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt-agnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    |||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||| ||        |||||||||||| |||||||||||||||    
T  44274533 aatttgacttttcaaatttcaagacaagttagtggtattaattaggggtatgtttaaggaaaaaaataataaatgcatttagtaatttgaaaag 44274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 32677566 - 32677622
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  32677566 aatttgatttttcatatttcaagacaaattagtagtattaattaggggtatgtttag 32677622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 38449728 - 38449572
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||| | ||||||||| |||||| || | || || |||||||||||||||||||        ||||| ||||||||||||| ||||||||  ||  |    
T  38449728 aatttgattattcatatttcaagacaggtcaataatattaattaggggtatgtttaggaaaaaaataatatatgcatctagtaagttgaaaaggggt--t 38449631  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    ||||| |||| | ||||||||| |||| |||||||||| |||||| ||||  |||||||    
T  38449630 tacatttaggaataaaaataaagtcaaatgagtgcttatatatagggacggcgggagta 38449572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 41327749 - 41327662
Alignment:
Q  250 aaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagta 339  Q
    |||||||||||||||||||||||||  |  |||||| || ||||||||||||| |||| || |||||||||||||  |||| ||||||||    
T  41327749 aaatgcatctagtaatttgaaaagagat--ttacatttatggacaaaaataaagtcaaatgggtgcttagatatatggacggagggagta 41327662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 45214816 - 45214906
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaa 271  Q
    ||||| ||||||||||||| |||| || ||||||||| ||||||||||||||||||         ||||||||| ||||||||||||||||    
T  45214816 aatttaacttttcatattttaagataaattagtagtattaattaggggtatgtttaagaaaaaaataataaatgtatctagtaatttgaaa 45214906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 1246427 - 1246334
Alignment:
Q  181 aatttgactttt-catatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    |||||||||||| ||||||| |||||||| || ||||| |||||||||||||||||||        ||||||||| || |||||||||||||||    
T  1246427 aatttgactttttcatatttcaagacaagataatagtattaattaggggtatgtttagaaaaataataataaatgtatttagtaatttgaaaag 1246334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 17250972 - 17250834
Alignment:
Q  184 ttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta-gnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaatta 282  Q
    |||||||||||||||| |||||||| |||||||| ||||||  |||||||||| |        |||||||||||| ||||||||| |||||  ||  |||    
T  17250972 ttgacttttcatatttcaagacaagatagtagtattaattaaaggtatgtttaggaaaaaaaataataaatgcatatagtaatttaaaaaggagt--tta 17250875  T
Q  283 catctagggacaaaaataaaatcaagtgagtgcttagatat 323  Q
    ||| ||| |||||||||||||| || |||||| ||| ||||    
T  17250874 catttagagacaaaaataaaattaaatgagtgtttacatat 17250834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 38982085 - 38981961
Alignment:
Q  181 aatttgacttttcatatttgaagacaa--gttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgta 278  Q
    ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||| |||        ||||||||||||||| ||||||  ||| |||      
T  38982085 aatttgacttttcatatttcaagacaattgttagtagtattaattaggggtatgtatag--aaaaaataataaatgcatctaataattt--aaaaatggg 38981990  T
Q  279 attacatctagggacaaaaataaaatcaa 307  Q
     ||| || |||||||||||||||||||||    
T  38981989 tttagatttagggacaaaaataaaatcaa 38981961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 324
Target Start/End: Original strand, 3645414 - 3645551
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||          || ||||| ||||| ||||||||||||  | | |    
T  3645414 aatttgacttttcatatttcaaggcaagttagtagtattaatta-gggtatgttta---tgaagaaaaaaaatgtatctaataatttgaaaag--ggact 3645507  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
    ||||| |||||| ||||| |||||||| || |||||||||||||    
T  3645508 tacatttagggataaaaagaaaatcaaatgggtgcttagatata 3645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 4758117 - 4758241
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||| ||||||| |||| || ||||||||| ||||||||  |||||||||        ||||||||||||||| |||| ||||||||   | |    
T  4758117 aatttgactttacatattttaagaaaaattagtagtattaattaggaatatgtttaggaaaaaaataataaatgcatctaataatctgaaaaga--aatt 4758214  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| |||  ||||||||||||||||    
T  4758215 tacatttagaaacaaaaataaaatcaa 4758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 44421890 - 44421984
Alignment:
Q  247 aataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtattag 343  Q
    |||||||||||||| ||||||  ||||  ||  |||||| ||| ||||||||||||||||| |  |||||||||||||| || | ||||||||||||    
T  44421890 aataaatgcatctaataatttagaaaggggt--ttacatttagagacaaaaataaaatcaaataggtgcttagatatagggatggagggagtattag 44421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 1604328 - 1604272
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||| ||||||||| ||||||| | ||||||| |||||||||||    
T  1604328 aatttgactttttatatctgaagacaaattagtaggaataattagaggtatgtttag 1604272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 2917115 - 2916974
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||| |||||| |||||| ||||||||||||||||| ||||||| | ||| ||||         |||| ||| |||||||||||||||||||| ||  |    
T  2917115 aatttaactttttatattttaagacaagttagtagtattaattagtgatatttttaaaaaaataataattaatacatctagtaatttgaaaagaagt--t 2917018  T
Q  281 tacatctagggacaaaaataaaatcaagtgagtgcttagatata 324  Q
     |||| ||  || ||||||||| | || ||||||||||||||||    
T  2917017 cacatttaaagataaaaataaagttaaatgagtgcttagatata 2916974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 3326815 - 3326871
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||| ||||||||||||| |||| ||  |||||||| |||||||||||||||||||    
T  3326815 aatttaacttttcatatttcaagataacgtagtagtattaattaggggtatgtttag 3326871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 11459244 - 11459300
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| |||||| |||| ||||||||||||||||| |||||| | ||||||||||    
T  11459244 aatttgatttttcaaatttcaagacaagttagtagtattaattaagagtatgtttag 11459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 35178944 - 35179000
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||| ||||||||||| |||| |||||||  ||| |||||||||||||||||||    
T  35178944 aatttgatttttcatatttcaagataagttagcggtattaattaggggtatgtttag 35179000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 2654392 - 2654446
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttt 235  Q
    ||||||| ||||||||||| |||| |||||| ||||| ||||||||| |||||||    
T  2654392 aatttgatttttcatattttaagataagttaatagtattaattagggttatgttt 2654446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 375359 - 375323
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagta 217  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  375359 aatttgatttttcatatttcaagacaagttagtagta 375323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 20427180 - 20427236
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    ||||||||||||||||||| |  ||||||| | |||| |||||| ||||||||||||    
T  20427180 aatttgacttttcatatttcagaacaagtttgcagtattaattaagggtatgtttag 20427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 21012944 - 21013000
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag 237  Q
    |||||||||||| |||||| || ||||||||||||||  ||||||| |||| |||||    
T  21012944 aatttgactttttatatttcaaaacaagttagtagtataaattaggagtatatttag 21013000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 42250893 - 42250849
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattag 225  Q
    |||||||||||| |||||| ||||||||||| ||||| |||||||    
T  42250893 aatttgactttttatatttcaagacaagttaatagtattaattag 42250849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 24150 - 24274
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaagatgtaat 280  Q
    ||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||        || |||||||||||||||||||| ||||| | | |    
T  24150 aatttgacttttcatatttcaagataagttaatagtattaattaggggtatgtttagaaaaaaaatagtaaatgcatctagtaatttg-aaagaag-att 24247  T
Q  281 tacatctagggacaaaaataaaatcaa 307  Q
    ||||| |||||||||||||||||||||    
T  24248 tacatttagggacaaaaataaaatcaa 24274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 38491 - 38400
Alignment:
Q  181 aatttgactttt-catatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaa 272  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||    
T  38491 aatttgactttttcatatttcaagacaagttagtagtattaattaggggtatgtttag-gaaaaaataataaatgcatctagtaatttgaaaa 38400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 25790 - 25949
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtttag-nnnnnnnntaataaatgcatctagtaatttgaaaagatgtaa 279  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||         ||||||||  ||||||||||||||||||| ||      
T  25790 aatttgacttt-catatttcaagacaagtgagtagtattaattaggggtatgtttagaaaaaaaaataataaatatatctagtaatttgaaaagaggt-- 25886  T
Q  280 ttacatctagggacaaaaataaaatcaagtgagtgcttagatatagagacgaagggagtatta 342  Q
    |||||| ||||||||||| ||||||||| |  ||||||| ||||||  ||  |||||||||||    
T  25887 ttacatttagggacaaaactaaaatcaaataggtgcttacatataggaacagagggagtatta 25949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 99831 - 99778
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgtt 234  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| || |||||    
T  99831 aatttgacttttcatatttcaagacaagttagtagtattaattagaggcatgtt 99778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 49227 - 49319
Alignment:
Q  181 aatttgactttt-catatttgaagacaagttagtagtactaattaggggtatgtttagnnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    |||||||||||| ||||||| || |||| ||||||||| |||||||||||||||||||        |||||||| |||||||||||||||||||    
T  49227 aatttgactttttcatatttcaaaacaaattagtagtattaattaggggtatgtttag-gaaaaaataataaatacatctagtaatttgaaaag 49319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 214709 - 214805
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtag--tactaattaggggtatgtttag--nnnnnnnntaataaatgcatctagtaatttgaaaag 273  Q
    |||||||||||| |||||| |||| ||||||||||  || |||||||||||||||||||          ||||||||||||||||||||||||||||    
T  214709 aatttgactttttatattttaagataagttagtagtatattaattaggggtatgtttagaaaaaatatataataaatgcatctagtaatttgaaaag 214805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 20105 - 20160
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagtagtactaattaggggtatgttta 236  Q
    |||||||||||||| |||| || |||||||||||||| ||||||  ||||||||||    
T  20105 aatttgacttttcaaatttcaaaacaagttagtagtattaattataggtatgttta 20160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 7668 - 7701
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagta 214  Q
    ||||||||||||||||||| ||||||||||||||    
T  7668 aatttgacttttcatatttcaagacaagttagta 7701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 22151 - 22184
Alignment:
Q  181 aatttgacttttcatatttgaagacaagttagta 214  Q
    ||||| ||||||||||||||||||||||||||||    
T  22151 aatttaacttttcatatttgaagacaagttagta 22184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 22585 - 22678
Alignment:
Q  246 taataaatgcatctagtaatttgaaaagatgtaattacatctagggacaaaaataaaatcaagt-gagtgcttagatatagagacgaagggagtat 340  Q
    ||||||||||||||||||||||||||   |||  |||||| ||| |||||||||||| |||| | |||  |||||||||| ||||| | |||||||    
T  22585 taataaatgcatctagtaatttgaaa--gtgtgtttacatgtagagacaaaaataaagtcaaatggaggacttagatatatagacggatggagtat 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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