View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12341_low_4 (Length: 283)

Name: NF12341_low_4
Description: NF12341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12341_low_4
NF12341_low_4
[»] chr4 (75 HSPs)
chr4 (3-270)||(43277933-43278203)
chr4 (1-117)||(394124-394240)
chr4 (4-117)||(26742316-26742429)
chr4 (1-117)||(43244231-43244347)
chr4 (1-116)||(24825805-24825920)
chr4 (4-117)||(20399756-20399869)
chr4 (1-117)||(22757249-22757365)
chr4 (1-117)||(36124198-36124314)
chr4 (1-117)||(38943998-38944114)
chr4 (2-117)||(26674527-26674642)
chr4 (1-116)||(32616709-32616824)
chr4 (1-111)||(42197714-42197824)
chr4 (1-106)||(24100306-24100411)
chr4 (4-116)||(13586093-13586205)
chr4 (1-117)||(13965715-13965831)
chr4 (1-117)||(51152279-51152395)
chr4 (1-117)||(53647787-53647903)
chr4 (3-117)||(7060478-7060592)
chr4 (1-117)||(11210163-11210279)
chr4 (1-117)||(31522101-31522217)
chr4 (1-117)||(50801372-50801488)
chr4 (6-117)||(27394985-27395096)
chr4 (1-116)||(29922991-29923106)
chr4 (8-117)||(24611657-24611765)
chr4 (1-117)||(477862-477978)
chr4 (1-117)||(6882111-6882227)
chr4 (4-117)||(7083665-7083782)
chr4 (1-117)||(30202193-30202309)
chr4 (2-117)||(39523564-39523680)
chr4 (5-117)||(43493141-43493253)
chr4 (2-117)||(24568564-24568679)
chr4 (27-117)||(7861082-7861172)
chr4 (4-117)||(19745544-19745657)
chr4 (4-117)||(19794149-19794262)
chr4 (1-117)||(6911835-6911951)
chr4 (1-117)||(25658322-25658438)
chr4 (1-117)||(28837220-28837336)
chr4 (4-112)||(39837755-39837863)
chr4 (3-117)||(8712685-8712793)
chr4 (4-117)||(626403-626516)
chr4 (4-109)||(2447963-2448068)
chr4 (1-117)||(20887607-20887722)
chr4 (5-117)||(44756896-44757008)
chr4 (1-117)||(56236678-56236788)
chr4 (1-117)||(45350920-45351036)
chr4 (1-117)||(45360399-45360515)
chr4 (52-117)||(29268678-29268743)
chr4 (36-114)||(3159152-3159230)
chr4 (4-112)||(8517312-8517417)
chr4 (36-105)||(27090890-27090959)
chr4 (3-106)||(5814512-5814609)
chr4 (41-117)||(40198435-40198511)
chr4 (59-117)||(12717025-12717083)
chr4 (35-117)||(22049288-22049370)
chr4 (59-117)||(24789344-24789402)
chr4 (59-117)||(24818857-24818915)
chr4 (36-93)||(54549023-54549080)
chr4 (47-117)||(22121601-22121671)
chr4 (52-117)||(12754318-12754383)
chr4 (1-117)||(55600393-55600503)
chr4 (68-116)||(1531953-1532001)
chr4 (61-117)||(56171999-56172055)
chr4 (79-116)||(2624541-2624578)
chr4 (79-116)||(4643903-4643940)
chr4 (52-93)||(6082325-6082366)
chr4 (79-116)||(9283956-9283993)
chr4 (79-116)||(25273928-25273965)
chr4 (79-116)||(29965680-29965717)
chr4 (79-116)||(43154021-43154058)
chr4 (79-116)||(47417707-47417744)
chr4 (79-116)||(49410268-49410305)
chr4 (79-116)||(50766519-50766556)
chr4 (79-116)||(53616657-53616694)
chr4 (81-117)||(24825775-24825811)
chr4 (53-117)||(56062144-56062208)
[»] chr1 (56 HSPs)
chr1 (4-117)||(15391105-15391218)
chr1 (1-117)||(44517302-44517419)
chr1 (5-117)||(7995414-7995526)
chr1 (1-117)||(14265439-14265555)
chr1 (1-117)||(29205440-29205556)
chr1 (5-117)||(42276510-42276622)
chr1 (1-117)||(45750633-45750749)
chr1 (1-117)||(18343768-18343883)
chr1 (5-117)||(28677984-28678096)
chr1 (1-117)||(51418139-51418255)
chr1 (6-117)||(29726452-29726563)
chr1 (2-117)||(33486881-33486996)
chr1 (1-116)||(45193478-45193593)
chr1 (1-118)||(32784233-32784350)
chr1 (1-117)||(3232943-3233059)
chr1 (1-117)||(4882209-4882325)
chr1 (7-117)||(13488392-13488502)
chr1 (5-117)||(10627155-10627266)
chr1 (1-117)||(37822196-37822311)
chr1 (1-117)||(4870883-4870999)
chr1 (1-117)||(27534852-27534968)
chr1 (1-117)||(9298272-9298382)
chr1 (16-117)||(17347752-17347853)
chr1 (1-117)||(32878863-32878973)
chr1 (1-117)||(33938863-33938979)
chr1 (4-103)||(15791128-15791227)
chr1 (58-117)||(20411727-20411786)
chr1 (35-117)||(42491048-42491130)
chr1 (5-117)||(424145-424257)
chr1 (1-117)||(47551250-47551360)
chr1 (3-117)||(12871776-12871884)
chr1 (51-117)||(32301493-32301559)
chr1 (34-107)||(13869802-13869875)
chr1 (52-117)||(25032989-25033054)
chr1 (55-106)||(13999132-13999183)
chr1 (52-105)||(8737517-8737570)
chr1 (52-117)||(26097906-26097971)
chr1 (52-116)||(10304734-10304798)
chr1 (81-117)||(50107845-50107881)
chr1 (52-99)||(31427051-31427098)
chr1 (35-105)||(2513484-2513554)
chr1 (35-117)||(28399213-28399295)
chr1 (52-117)||(38783222-38783287)
chr1 (50-115)||(39080814-39080879)
chr1 (79-116)||(40646707-40646744)
chr1 (47-103)||(3101836-3101892)
chr1 (47-117)||(29069737-29069808)
chr1 (47-93)||(10782680-10782726)
chr1 (79-116)||(5701296-5701333)
chr1 (79-116)||(19715902-19715939)
chr1 (47-112)||(29551645-29551710)
chr1 (79-116)||(31836844-31836881)
chr1 (79-116)||(40881019-40881056)
chr1 (79-116)||(50148407-50148444)
chr1 (79-116)||(50272147-50272184)
chr1 (81-117)||(29938393-29938429)
[»] chr3 (64 HSPs)
chr3 (1-117)||(31270481-31270597)
chr3 (1-117)||(49627953-49628069)
chr3 (1-117)||(54706573-54706689)
chr3 (3-117)||(53402776-53402890)
chr3 (4-117)||(14585617-14585730)
chr3 (1-117)||(36624553-36624669)
chr3 (1-117)||(53155288-53155404)
chr3 (2-117)||(22485120-22485235)
chr3 (2-117)||(40883725-40883840)
chr3 (1-117)||(1074752-1074868)
chr3 (5-117)||(35174863-35174975)
chr3 (1-117)||(40013130-40013246)
chr3 (1-117)||(48401017-48401133)
chr3 (1-117)||(48652298-48652414)
chr3 (2-117)||(11819238-11819353)
chr3 (4-117)||(36691660-36691773)
chr3 (5-117)||(54238882-54238992)
chr3 (2-117)||(33637558-33637673)
chr3 (3-117)||(3457094-3457208)
chr3 (3-105)||(31462606-31462708)
chr3 (4-112)||(27189265-27189373)
chr3 (1-117)||(48855032-48855148)
chr3 (2-117)||(19645347-19645461)
chr3 (1-110)||(55446219-55446328)
chr3 (1-117)||(19861137-19861253)
chr3 (1-117)||(30156139-30156255)
chr3 (1-117)||(48401268-48401389)
chr3 (1-107)||(55455030-55455142)
chr3 (5-117)||(13701864-13701975)
chr3 (1-117)||(32080612-32080728)
chr3 (1-117)||(45047669-45047785)
chr3 (5-116)||(34103610-34103720)
chr3 (1-117)||(41868181-41868297)
chr3 (5-116)||(39610366-39610477)
chr3 (52-115)||(53962275-53962338)
chr3 (35-117)||(105927-106009)
chr3 (50-107)||(3961669-3961726)
chr3 (4-117)||(24483540-24483653)
chr3 (2-70)||(4081910-4081978)
chr3 (35-117)||(2147911-2147993)
chr3 (3-117)||(47733743-47733851)
chr3 (45-117)||(3312599-3312671)
chr3 (1-47)||(34960760-34960806)
chr3 (35-117)||(39429393-39429475)
chr3 (41-105)||(31730811-31730875)
chr3 (74-118)||(37451892-37451936)
chr3 (1-48)||(38530165-38530212)
chr3 (47-93)||(20044752-20044798)
chr3 (47-117)||(41598369-41598439)
chr3 (52-97)||(5327382-5327427)
chr3 (81-117)||(55090521-55090557)
chr3 (66-117)||(32408733-32408784)
chr3 (74-117)||(40702604-40702647)
chr3 (74-117)||(40716390-40716433)
chr3 (1-31)||(4019833-4019863)
chr3 (59-101)||(48822245-48822287)
chr3 (79-116)||(12116128-12116165)
chr3 (79-116)||(21488121-21488158)
chr3 (79-116)||(32607499-32607536)
chr3 (79-116)||(35499205-35499242)
chr3 (2-31)||(53427033-53427062)
chr3 (81-117)||(34960832-34960868)
chr3 (57-93)||(40401415-40401451)
chr3 (35-111)||(48212501-48212577)
[»] chr8 (48 HSPs)
chr8 (1-117)||(4757320-4757436)
chr8 (1-117)||(11162038-11162154)
chr8 (1-117)||(31407606-31407722)
chr8 (1-117)||(37612808-37612924)
chr8 (3-117)||(7579715-7579829)
chr8 (1-117)||(9501741-9501857)
chr8 (1-117)||(10338680-10338796)
chr8 (1-117)||(12329782-12329898)
chr8 (2-117)||(3204644-3204759)
chr8 (3-106)||(14600558-14600661)
chr8 (15-117)||(43937049-43937151)
chr8 (1-117)||(1810080-1810196)
chr8 (1-117)||(24699987-24700103)
chr8 (1-117)||(37128346-37128461)
chr8 (1-116)||(10148101-10148216)
chr8 (1-116)||(30026740-30026855)
chr8 (3-117)||(24791028-24791142)
chr8 (3-117)||(31202613-31202727)
chr8 (3-117)||(39067549-39067663)
chr8 (3-117)||(41361887-41362001)
chr8 (1-117)||(2234328-2234444)
chr8 (1-107)||(2025082-2025188)
chr8 (3-105)||(24210408-24210510)
chr8 (1-117)||(31308303-31308419)
chr8 (1-117)||(13570597-13570715)
chr8 (1-117)||(22787647-22787761)
chr8 (2-117)||(19720164-19720279)
chr8 (1-105)||(38546012-38546115)
chr8 (1-117)||(13576058-13576168)
chr8 (25-117)||(28296989-28297081)
chr8 (35-111)||(32778849-32778925)
chr8 (1-117)||(10334331-10334441)
chr8 (50-115)||(10633088-10633153)
chr8 (35-117)||(2968687-2968769)
chr8 (60-117)||(1039811-1039868)
chr8 (3-72)||(23971043-23971112)
chr8 (1-69)||(40490374-40490442)
chr8 (52-117)||(19488984-19489049)
chr8 (55-117)||(20992962-20993024)
chr8 (47-117)||(4429216-4429286)
chr8 (53-102)||(32726606-32726655)
chr8 (59-117)||(44410727-44410784)
chr8 (79-116)||(2655910-2655947)
chr8 (79-116)||(9498606-9498643)
chr8 (79-116)||(9619364-9619401)
chr8 (79-116)||(23851501-23851538)
chr8 (3-39)||(15288687-15288723)
chr8 (3-39)||(15469056-15469092)
[»] chr7 (68 HSPs)
chr7 (1-117)||(1280987-1281103)
chr7 (1-117)||(21603615-21603731)
chr7 (1-117)||(21990817-21990933)
chr7 (1-117)||(24988330-24988446)
chr7 (3-117)||(10094596-10094710)
chr7 (1-117)||(9785472-9785588)
chr7 (1-117)||(36579191-36579307)
chr7 (1-117)||(45457406-45457522)
chr7 (1-116)||(41288112-41288227)
chr7 (4-116)||(9719826-9719938)
chr7 (1-117)||(17509054-17509170)
chr7 (1-117)||(17544044-17544160)
chr7 (1-117)||(26161106-26161222)
chr7 (5-117)||(28664795-28664907)
chr7 (1-117)||(45482219-45482335)
chr7 (1-116)||(3266542-3266657)
chr7 (3-117)||(17473604-17473718)
chr7 (3-117)||(17579496-17579610)
chr7 (4-117)||(24320076-24320189)
chr7 (5-117)||(48304246-48304359)
chr7 (1-117)||(36253085-36253201)
chr7 (5-117)||(46025883-46025995)
chr7 (2-112)||(11833178-11833288)
chr7 (1-117)||(39532825-39532941)
chr7 (1-117)||(42644827-42644943)
chr7 (4-117)||(10574536-10574649)
chr7 (4-117)||(42603622-42603735)
chr7 (1-117)||(36719402-36719518)
chr7 (5-117)||(43847225-43847337)
chr7 (2-117)||(2622747-2622862)
chr7 (2-117)||(6667550-6667665)
chr7 (1-117)||(32740907-32741023)
chr7 (1-117)||(40761743-40761859)
chr7 (1-117)||(5684519-5684635)
chr7 (1-117)||(5709569-5709685)
chr7 (5-117)||(22747363-22747475)
chr7 (4-117)||(15017228-15017342)
chr7 (1-106)||(21954674-21954773)
chr7 (1-110)||(29352388-29352491)
chr7 (1-85)||(44482723-44482807)
chr7 (5-117)||(15674465-15674578)
chr7 (35-117)||(4621251-4621333)
chr7 (1-106)||(27535594-27535699)
chr7 (5-117)||(38276999-38277105)
chr7 (41-117)||(25112667-25112743)
chr7 (61-114)||(5238111-5238164)
chr7 (1-70)||(32643170-32643239)
chr7 (41-105)||(6496059-6496123)
chr7 (1-103)||(9137125-9137221)
chr7 (51-102)||(22493204-22493255)
chr7 (58-117)||(37593274-37593333)
chr7 (1-94)||(14657707-14657794)
chr7 (55-117)||(27050367-27050429)
chr7 (55-117)||(37375935-37375997)
chr7 (52-117)||(37714634-37714699)
chr7 (52-104)||(25531620-25531672)
chr7 (47-117)||(31703363-31703433)
chr7 (61-117)||(43256460-43256516)
chr7 (55-117)||(5948815-5948878)
chr7 (59-118)||(17223287-17223346)
chr7 (59-117)||(4028336-4028394)
chr7 (55-117)||(9137563-9137625)
chr7 (1-31)||(45949528-45949558)
chr7 (79-116)||(2843248-2843285)
chr7 (79-116)||(14627886-14627923)
chr7 (79-116)||(32684701-32684738)
chr7 (79-116)||(46822048-46822085)
chr7 (53-117)||(46881334-46881398)
[»] chr6 (33 HSPs)
chr6 (1-117)||(23101258-23101374)
chr6 (1-117)||(21507687-21507803)
chr6 (1-117)||(23654405-23654521)
chr6 (1-114)||(31937270-31937383)
chr6 (1-117)||(12481220-12481336)
chr6 (1-117)||(15589958-15590074)
chr6 (1-117)||(31705320-31705436)
chr6 (1-117)||(35219763-35219879)
chr6 (1-117)||(1106717-1106833)
chr6 (1-117)||(2304688-2304804)
chr6 (1-117)||(4393925-4394041)
chr6 (1-117)||(8693504-8693620)
chr6 (1-116)||(23637970-23638085)
chr6 (1-117)||(6419708-6419824)
chr6 (1-117)||(14782992-14783108)
chr6 (3-117)||(6296101-6296215)
chr6 (3-117)||(6302911-6303025)
chr6 (1-117)||(13871476-13871586)
chr6 (52-116)||(19402711-19402775)
chr6 (3-117)||(4921739-4921847)
chr6 (36-105)||(2488304-2488373)
chr6 (4-96)||(29920770-29920862)
chr6 (52-117)||(1915087-1915152)
chr6 (5-107)||(12654163-12654259)
chr6 (1-71)||(30813267-30813337)
chr6 (61-117)||(29284908-29284964)
chr6 (47-106)||(12156302-12156361)
chr6 (52-106)||(7076708-7076762)
chr6 (75-117)||(15175965-15176007)
chr6 (75-117)||(15470161-15470203)
chr6 (47-88)||(9044014-9044055)
chr6 (2-31)||(12652051-12652080)
chr6 (80-116)||(8196415-8196451)
[»] chr2 (65 HSPs)
chr2 (1-117)||(4732225-4732341)
chr2 (4-117)||(36868163-36868276)
chr2 (1-117)||(9689835-9689951)
chr2 (1-116)||(13878859-13878974)
chr2 (1-116)||(14018984-14019099)
chr2 (2-117)||(34962927-34963042)
chr2 (4-117)||(43473981-43474094)
chr2 (1-117)||(9978519-9978635)
chr2 (1-117)||(10286857-10286973)
chr2 (1-117)||(20560982-20561098)
chr2 (1-117)||(31908667-31908782)
chr2 (1-117)||(32314597-32314713)
chr2 (1-117)||(35333660-35333776)
chr2 (2-107)||(44942451-44942556)
chr2 (1-105)||(4739496-4739600)
chr2 (4-109)||(28230950-28231055)
chr2 (1-117)||(29542947-29543064)
chr2 (4-117)||(38535158-38535271)
chr2 (1-117)||(4426508-4426624)
chr2 (5-117)||(12704842-12704954)
chr2 (1-117)||(28261738-28261854)
chr2 (1-117)||(33012203-33012319)
chr2 (1-107)||(18089247-18089353)
chr2 (2-117)||(41797749-41797861)
chr2 (1-117)||(38384307-38384423)
chr2 (2-117)||(43696023-43696138)
chr2 (3-117)||(22597290-22597404)
chr2 (1-117)||(5754443-5754553)
chr2 (4-117)||(12890971-12891084)
chr2 (1-117)||(7072798-7072914)
chr2 (2-117)||(17267977-17268092)
chr2 (4-117)||(4604159-4604273)
chr2 (5-117)||(11798383-11798489)
chr2 (4-117)||(32015408-32015521)
chr2 (1-117)||(25068007-25068121)
chr2 (1-117)||(27095861-27095977)
chr2 (1-106)||(13740510-13740615)
chr2 (1-90)||(34416613-34416702)
chr2 (2-117)||(11937710-11937824)
chr2 (1-118)||(17767416-17767527)
chr2 (4-117)||(34471121-34471228)
chr2 (1-117)||(15920030-15920139)
chr2 (54-117)||(6431305-6431368)
chr2 (52-105)||(26254837-26254890)
chr2 (2-117)||(20124626-20124735)
chr2 (59-117)||(27666365-27666423)
chr2 (53-117)||(823860-823924)
chr2 (52-105)||(11561573-11561625)
chr2 (2-117)||(7581944-7582053)
chr2 (4-48)||(11942592-11942636)
chr2 (47-102)||(19904678-19904733)
chr2 (52-117)||(8531463-8531528)
chr2 (61-117)||(44149951-44150007)
chr2 (66-117)||(11581045-11581096)
chr2 (45-104)||(20607208-20607267)
chr2 (74-117)||(40039231-40039274)
chr2 (75-117)||(2550325-2550367)
chr2 (59-105)||(8781719-8781765)
chr2 (59-105)||(13548809-13548855)
chr2 (55-117)||(45694350-45694412)
chr2 (79-116)||(84187-84224)
chr2 (2-31)||(11550445-11550474)
chr2 (79-116)||(27249158-27249195)
chr2 (79-116)||(36234045-36234082)
chr2 (58-114)||(12994119-12994175)
[»] chr5 (50 HSPs)
chr5 (1-117)||(7771671-7771787)
chr5 (1-117)||(23428407-23428523)
chr5 (1-116)||(6635404-6635519)
chr5 (2-117)||(17732237-17732352)
chr5 (1-117)||(11858065-11858179)
chr5 (1-117)||(6281199-6281315)
chr5 (1-117)||(11734669-11734785)
chr5 (1-117)||(23881966-23882082)
chr5 (1-117)||(33164319-33164434)
chr5 (1-117)||(39179678-39179794)
chr5 (4-117)||(20483341-20483454)
chr5 (1-117)||(177954-178069)
chr5 (4-116)||(17096094-17096206)
chr5 (1-117)||(17331483-17331599)
chr5 (1-117)||(32347564-32347680)
chr5 (1-117)||(43494015-43494131)
chr5 (11-116)||(980889-980994)
chr5 (4-117)||(3079187-3079300)
chr5 (4-117)||(29097944-29098057)
chr5 (1-117)||(3740512-3740628)
chr5 (1-116)||(26294907-26295022)
chr5 (1-114)||(27241222-27241335)
chr5 (1-117)||(2555200-2555316)
chr5 (1-117)||(12439513-12439629)
chr5 (1-117)||(42609299-42609415)
chr5 (4-117)||(34431215-34431325)
chr5 (3-117)||(42396365-42396478)
chr5 (4-117)||(18653937-18654050)
chr5 (1-117)||(17699708-17699824)
chr5 (5-117)||(28040784-28040896)
chr5 (3-117)||(39531264-39531376)
chr5 (35-117)||(17687360-17687442)
chr5 (5-117)||(6681730-6681842)
chr5 (1-117)||(25962074-25962184)
chr5 (2-117)||(12215288-12215396)
chr5 (45-117)||(39915648-39915720)
chr5 (52-115)||(32309321-32309384)
chr5 (52-117)||(12891831-12891896)
chr5 (52-117)||(17523423-17523488)
chr5 (52-117)||(25487763-25487828)
chr5 (45-105)||(374449-374509)
chr5 (59-117)||(26240586-26240644)
chr5 (53-115)||(35275888-35275950)
chr5 (52-93)||(35402214-35402255)
chr5 (74-118)||(18573473-18573517)
chr5 (51-117)||(42512883-42512949)
chr5 (79-116)||(2057845-2057882)
chr5 (79-116)||(27266866-27266903)
chr5 (79-116)||(34881753-34881790)
chr5 (1-29)||(26293853-26293881)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-117)||(13096-13211)
[»] scaffold1350 (1 HSPs)
scaffold1350 (3-117)||(1729-1843)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-116)||(3056-3171)
[»] scaffold0294 (1 HSPs)
scaffold0294 (4-117)||(3920-4033)
[»] scaffold1379 (2 HSPs)
scaffold1379 (5-117)||(130-242)
scaffold1379 (1-102)||(939-1034)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-117)||(35239-35355)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-117)||(74319-74435)
[»] scaffold0312 (1 HSPs)
scaffold0312 (5-117)||(6292-6404)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-117)||(6980-7090)
[»] scaffold0432 (1 HSPs)
scaffold0432 (74-115)||(2343-2384)
[»] scaffold0007 (1 HSPs)
scaffold0007 (52-117)||(201952-202017)
[»] scaffold0580 (2 HSPs)
scaffold0580 (79-111)||(710-742)
scaffold0580 (79-111)||(8449-8481)
[»] scaffold0542 (1 HSPs)
scaffold0542 (52-116)||(3938-4002)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-35)||(136925-136957)


Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 3 - 270
Target Start/End: Complemental strand, 43278203 - 43277933
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43278203 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 43278104  T
Q  103 gacgggaaatcaaaa-gtaactttgatcgaaaaagtaactttgctcaaacaagaacctgttgattttgtcaaaaacaaattcaaagcaaatactagtaaa 201  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43278103 gacggaaaatcaaaaagtaactttgatcgaaaaagtaactttgctcaaacaagaacctgttgattttgtcaaaaacaaattcaaagcaaatactagcaaa 43278004  T
Q  202 atcatatgaataaattttatcaagtccacatacattacaaacta--tataagctgctgccatcactacaca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  43278003 atcatatgaataaattttatcaagtccacatacattacaaactatatataagctgctgccatcactacaca 43277933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 394124 - 394240
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||| ||||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  394124 ccggttctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 394223  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  394224 aagacgggaaataaaaa 394240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 26742316 - 26742429
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  26742316 gatctgcaacgttgacgactccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaag 26742415  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  26742416 acgggaaatcaaaa 26742429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43244231 - 43244347
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| ||||||| |||| ||||| ||||||||||||||||    
T  43244231 ccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacttgaatgaaataaacaccgcact 43244330  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  43244331 aagacgggaaatcaaaa 43244347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24825920 - 24825805
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  24825920 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaagaccgcact 24825821  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||| ||||||||    
T  24825820 aagacggaaaatcaaa 24825805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 20399756 - 20399869
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  20399756 gatctgcaacgttgacgacgacaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaaactgaatcaaataaacaccgcactaag 20399855  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  20399856 acgggaaatcaaaa 20399869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22757365 - 22757249
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||| | || |||||||||| ||||||| |||||||||||||||||||||||||||    
T  22757365 ccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 22757266  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||||||||    
T  22757265 aagacaggaaatcaaaa 22757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36124198 - 36124314
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||| || | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36124198 ccggatctgcaacgttgacaacgccaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 36124297  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  36124298 aagacgggaaataaaaa 36124314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38943998 - 38944114
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| ||||||||||| ||||| | |||||||| | ||||||||||||| || |||| |||||||||||||||||||||||||||    
T  38943998 ccggatctgcaacgttgacaacgccaaagtcattgtccttgatcggatctgcacttgctcaaagctattctttcaacctgaatcaaataaacaccgcact 38944097  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  38944098 aagacgggaaatcaaaa 38944114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 26674642 - 26674527
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||| |||  |||||    
T  26674642 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataagcacgacacta 26674543  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  26674542 agacgggaaatcaaaa 26674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32616709 - 32616824
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||| ||| | ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  32616709 ccggatctgcaacgttgacgatgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 32616808  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||||||||||||    
T  32616809 aagacgggaaatcaaa 32616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42197824 - 42197714
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  42197824 ccggatttgcaacgttgacgacaccaaagtcattgtcatcgatcggatctgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcact 42197725  T
Q  101 aagacgggaaa 111  Q
    |||||||||||    
T  42197724 aagacgggaaa 42197714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24100411 - 24100306
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  24100411 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccacact 24100312  T
Q  101 aagacg 106  Q
    ||||||    
T  24100311 aagacg 24100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 13586093 - 13586205
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||| |||||||| || ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13586093 gatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 13586192  T
Q  104 acgggaaatcaaa 116  Q
    |||| ||||||||    
T  13586193 acggaaaatcaaa 13586205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13965831 - 13965715
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||||||||  ||||||| |||||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  13965831 ccggatctacaacgttgacgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcact 13965732  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  13965731 aagacgggaaataaaaa 13965715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51152395 - 51152279
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||| |||| || ||||||||||||||||||||||| |||    
T  51152395 ccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgtact 51152296  T
Q  101 aagacgggaaatcaaaa 117  Q
    || ||||||||||||||    
T  51152295 aaaacgggaaatcaaaa 51152279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53647903 - 53647787
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||| ||||||||||||| ||||||| |||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||    
T  53647903 ccggatctgcaatgttggcgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatttttcaacctgaatcaaataaacaccgcact 53647804  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  53647803 aagacggaaaataaaaa 53647787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7060592 - 7060478
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||||||||| |||||||||||  ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||| |||    
T  7060592 ggatctgcaacgttgatgacgccaaagtaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcattaa 7060493  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  7060492 gacgggaaataaaaa 7060478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11210163 - 11210279
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| ||| |||||||| ||||||| |||||||| | ||||   |||||||||||||| |||||||||||||||||||||||||||    
T  11210163 ccggatctgcaacgttgatgacaccaaagtcattgtcattgatcggatctccactcaatcaaagttaatctttcaacctgaatcaaataaacaccgcact 11210262  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||| ||||||    
T  11210263 aagacgggaactcaaaa 11210279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31522217 - 31522101
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  31522217 ccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacactgcact 31522118  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||| ||||    
T  31522117 aagacgagaaataaaaa 31522101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50801488 - 50801372
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||| ||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  50801488 ccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcagatctgcacttgctcaaaattaatctttcaacctgaatcaaataaacacagcact 50801389  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||||||| |||||    
T  50801388 aagacgggaaaccaaaa 50801372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 27395096 - 27394985
Alignment:
Q  6 tctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    ||||| || ||||||||||||||||| ||||||| |||||||| | |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  27395096 tctgctacattgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 27394997  T
Q  106 gggaaatcaaaa 117  Q
    ||| ||||||||    
T  27394996 ggggaatcaaaa 27394985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29923106 - 29922991
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| |||||||| |||||||| ||||||| |||||||| | |||||||||| || ||||||| ||||||||||||||||||||||| |||    
T  29923106 ccggatctgcaacattgacgacaccaaagtcattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgtact 29923007  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||| ||||||||    
T  29923006 aagacggaaaatcaaa 29922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 24611657 - 24611765
Alignment:
Q  8 tgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgg 107  Q
    |||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||     
T  24611657 tgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagttaatctttcaacctgaatcaaat-aacaccgcactaagacga 24611755  T
Q  108 gaaatcaaaa 117  Q
    ||||| ||||    
T  24611756 gaaatgaaaa 24611765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 477862 - 477978
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| ||||  |||||||||||| ||||||| ||| |||| | ||||||||||||| |||| || |||||||||||||||||||||||||||    
T  477862 ccggatctgcaatgttgtagacgccaaagtcattgtcattgattggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcact 477961  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  477962 aagacgggaaataaaaa 477978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6882227 - 6882111
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||||||  ||||||| |||||||| | |||||||||| || ||||||| ||||||||||||||||||||||||| |    
T  6882227 ccggatctgcaacgttgacgacgacaaagttattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgcatt 6882128  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  6882127 aagacggaaaataaaaa 6882111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 7083665 - 7083782
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaa----ataaacaccgcac 99  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||    |||||||||||||    
T  7083665 gatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaatatataaacaccgcac 7083764  T
Q  100 taagacgggaaatcaaaa 117  Q
    || |||||||||||||||    
T  7083765 taggacgggaaatcaaaa 7083782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30202309 - 30202193
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||||| |||| || |||| |||||||||||| ||| |||||    
T  30202309 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttcctcaaagctaatttttcaacttgaatcaaataaccactgcact 30202210  T
Q  101 aagacgggaaatcaaaa 117  Q
    || ||||||||||||||    
T  30202209 aaaacgggaaatcaaaa 30202193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 39523680 - 39523564
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctc-aaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||| |||  ||||||| |||||||||||||||||||||||||||    
T  39523680 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaaaactaatctttcaacctgaatcaaataaacaccgcact 39523581  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||| ||||    
T  39523580 aagacgagaaataaaaa 39523564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 43493141 - 43493253
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||| ||||||||| |||||||| ||||||| || | ||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  43493141 atctgcaaagttgacgactccaaagtcattgtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 43493240  T
Q  105 cgggaaatcaaaa 117  Q
     ||||||||||||    
T  43493241 tgggaaatcaaaa 43493253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 24568564 - 24568679
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||| ||||| ||| ||||||| |||||||| | ||||| ||||||| ||||||| |||||||||||||||||||||| |||||    
T  24568564 cggatctgcaacgttgacgaggccaatgtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacaccccacta 24568663  T
Q  102 agacgggaaatcaaaa 117  Q
    |||||| |||| ||||    
T  24568664 agacggaaaataaaaa 24568679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 7861082 - 7861172
Alignment:
Q  27 aagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| ||||||| |||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7861082 aagtcattgtcattgatcggatctgcacttgcttaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 7861172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 19745657 - 19745544
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||| |||||||||| |||||| |||||||  ||||||| | ||||||||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  19745657 gatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacctcactaag 19745558  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  19745557 acgggaaataaaaa 19745544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 19794149 - 19794262
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||| |||||||||| |||||| |||||||  ||||||| | ||||||||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  19794149 gatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacacctcactaag 19794248  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  19794249 acgggaaataaaaa 19794262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6911951 - 6911835
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||| ||||||||||||||||| ||||||| |||||||| | | |||| |||||| ||||||| ||||||||||||||||||||| |||||    
T  6911951 ccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacactgcact 6911852  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||| ||||    
T  6911851 aagacaggaaataaaaa 6911835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25658438 - 25658322
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| |||||||||||||||||||||||| ||||| | |||||||| | ||||||||||||| ||||||| |||| | ||||||||||||| ||||||    
T  25658438 ccggatgtgcaacgttgacgacgccaaagtcattgtcgttgatcggatctgcacttgctcaaagctaatctttcaacataaatcaaataaacatcgcact 25658339  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  25658338 aagacggcaaataaaaa 25658322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28837336 - 28837220
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| | |||||| ||||||| | |||||| | ||||||||||||| ||||||| |||| ||||| ||||||||||||||||    
T  28837336 ccggatctgcaacgttgacgacacgaaagtcattgtcattgttcggatcttcacttgctcaaagctaatctttcaacgtgaattaaataaacaccgcact 28837237  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| | |||||||||    
T  28837236 aagacagaaaatcaaaa 28837220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 39837863 - 39837755
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||  |||||| || ||||||| |||||||| | |||||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  39837863 gatctgcaacgttgacgttgccaaaatcattgtcattgatcggatctgcacttgctcaaagcaaatatttcaacctgaatcaaataaacaccgcactaag 39837764  T
Q  104 acgggaaat 112  Q
    |||||||||    
T  39837763 acgggaaat 39837755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 8712793 - 8712685
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| |||      ||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  8712793 ggatctgcaacgttgacgacgccaaagtcattg------atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaa 8712700  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||| ||||||    
T  8712699 gacgggaactcaaaa 8712685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 626403 - 626516
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| || |||||| |||||||| ||||||| | |||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||      
T  626403 gatctgcaatgtcgacgacaccaaagtcattgtcattggtcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactagt 626502  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  626503 acgggaaataaaaa 626516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 2448068 - 2447963
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| |||||||||||||||||| || |||| ||| | || | ||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  2448068 gatctgcaatgttgacgacgccaaagtcattctcattgattgaatctgcacttgctcaaagttaatctttcaacataaatcaaataaacaccgcactaag 2447969  T
Q  104 acggga 109  Q
    ||||||    
T  2447968 acggga 2447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20887607 - 20887722
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||||||| | || |||||||||| ||||||| ||| ||||||| |||||||| ||||||    
T  20887607 ccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcggatttgcatttgctcaaagctaatctttcaatctgaatc-aataaacatcgcact 20887705  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  20887706 aagacgggaaataaaaa 20887722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 44756896 - 44757008
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||| | ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
T  44756896 atctgcaacgttgaagacgccaaagtcactgtcattaatcggatctgcacttgctcaatgctgatctttcaacctgaatcaaataaacaccgcactaaga 44756995  T
Q  105 cgggaaatcaaaa 117  Q
     || |||||||||    
T  44756996 tggaaaatcaaaa 44757008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 56236678 - 56236788
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| |||      ||||||| | | ||||||||||||||||||| |||| ||||||||||||| |||| | |    
T  56236678 ccggatctgcaacgttgacgacgccaaagtcattg------atcggatctgcgcttgctcaaagttaatctttcaacttgaatcaaataaataccgtatt 56236771  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  56236772 aagacgggaaatcaaaa 56236788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 45350920 - 45351036
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||| ||||||||||||||||| |||||||  ||| ||| | |||||| |||||| ||||||| |||| ||| ||||||||||||| ||||    
T  45350920 ccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccacact 45351019  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||||||||    
T  45351020 aagatgggaaatcaaaa 45351036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 45360399 - 45360515
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||| ||||||||||||||||| |||||||  ||| ||| | |||||| |||||| ||||||| |||| ||| ||||||||||||| ||||    
T  45360399 ccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccacact 45360498  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||||||||    
T  45360499 aagatgggaaatcaaaa 45360515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 29268678 - 29268743
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29268678 cacttcctcaaagtcaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 29268743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 3159230 - 3159152
Alignment:
Q  36 tcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatca 114  Q
    |||| |||||||||| ||||||||||||| ||| ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  3159230 tcattgatcggatatgcacttgctcaaagctaacctttcaacctgattcaaataaacatcgcactaagacgggaaatca 3159152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 8517312 - 8517417
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| ||||||||| | |||||| |||||||   |||||| | ||||||||||||  ||||||| |||||| ||||||||||||||| |||||||    
T  8517312 gatctgcaatgttgacgacacaaaagtcattgtcat---tcggatctgcacttgctcaaaactaatctttcaacctaaatcaaataaacaccacactaag 8517408  T
Q  104 acgggaaat 112  Q
    |||||||||    
T  8517409 acgggaaat 8517417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 27090959 - 27090890
Alignment:
Q  36 tcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  27090959 tcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagac 27090890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 5814609 - 5814512
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||||||||| |||||||||||| |||      |||| || | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  5814609 ggatctgcaacgttgatgacgccaaagtcattg------atcgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaa 5814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 40198435 - 40198511
Alignment:
Q  41 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| ||||| ||| |||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  40198435 gatcggacatacatttgttcaaagataatctttcaacctgaatcaaataaacaccacactaagacgagaaatcaaaa 40198511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 12717025 - 12717083
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  12717025 tcaaagctaatccttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 12717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 22049288 - 22049370
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| | |||||||| ||||||||||||| | ||| ||| |||||||||||||||||||||| ||||| ||||    
T  22049288 gtcattgatcggatctgcacttgcttaaagttaatcttcaatcctaaataaaataaacaccgcactaagacgtgaaataaaaa 22049370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 24789402 - 24789344
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  24789402 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacgagaaatcaaaa 24789344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 24818857 - 24818915
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  24818857 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacgagaaatcaaaa 24818915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 54549023 - 54549080
Alignment:
Q  36 tcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    |||| ||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  54549023 tcattgatgggatctacacttgctcaaagtttatcttccaacccgaatcaaataaaca 54549080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 22121671 - 22121601
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||||||||||| |||| || |||| ||||||||||||||||| || ||||||| | ||||||||    
T  22121671 atatgcacttgctcaaagctaatatttcaacttgaatcaaataaacaccacattaagacgtgtaatcaaaa 22121601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 12754383 - 12754318
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||||||||| || |||| ||||||||||||||||| || ||||||||| ||| ||||    
T  12754383 cacttggtcaaagttaatgtttcaacttgaatcaaataaacaccacattaagacgggtaataaaaa 12754318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 55600393 - 55600503
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| ||| || |||      || |||| | | ||||||||||| ||||||| ||| | ||||||||||||||||| |||    
T  55600393 ccggatctgcaacgttgacgacgctaaaatcattg------attggatctgcgcttgctcaaagctaatctttcaagcggaatcaaataaacaccgtact 55600486  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| | ||||| ||||    
T  55600487 aagatgagaaataaaaa 55600503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 1532001 - 1531953
Alignment:
Q  68 atcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||| |||| ||||||||||||||||||||| ||||| ||||||||||    
T  1532001 atctttcaacatgaatcaaataaacaccgcacgaagacaggaaatcaaa 1531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 56172055 - 56171999
Alignment:
Q  61 aaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||||| |||||| ||| |||||||||||||||||||| || |||||||||    
T  56172055 aaagataatctttcaaccttaattaaataaacaccgcactaagatggaaaatcaaaa 56171999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 2624578 - 2624541
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  2624578 tgaatcaaataaacaccgcaacaagacgggaaatcaaa 2624541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 4643940 - 4643903
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  4643940 tgaatcaaatgaacaccgcacaaagacgggaaatcaaa 4643903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 6082325 - 6082366
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    ||||||||||||| ||||||| |||||| |||||||||||||    
T  6082325 cacttgctcaaagctaatctttcaacctaaatcaaataaaca 6082366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 9283993 - 9283956
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9283993 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 9283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 25273965 - 25273928
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  25273965 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 25273928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 29965717 - 29965680
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  29965717 tgaatcaaatgaacaccgcacaaagacgggaaatcaaa 29965680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 43154021 - 43154058
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  43154021 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 43154058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 47417744 - 47417707
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  47417744 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 47417707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 49410305 - 49410268
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  49410305 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 49410268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 50766519 - 50766556
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  50766519 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 50766556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 53616657 - 53616694
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  53616657 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 53616694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 24825811 - 24825775
Alignment:
Q  81 aatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  24825811 aatcaaatacacaccgcacaaagacgggaaatcaaaa 24825775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 56062208 - 56062144
Alignment:
Q  53 acttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||| |||| |  |||| |||||||||||||||  ||||||||||| ||||| ||||    
T  56062208 acttgctcaaagataatatgtcaacttgaatcaaataaacattgcactaagacgagaaataaaaa 56062144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 6e-46; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 15391105 - 15391218
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15391105 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcactaag 15391204  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  15391205 acgggaaatcaaaa 15391218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44517419 - 44517302
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaa-gtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcac 99  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44517419 ccggatctgcaacgttgacgacgccaaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcac 44517320  T
Q  100 taagacgggaaatcaaaa 117  Q
    ||||||||||||||||||    
T  44517319 taagacgggaaatcaaaa 44517302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 7995414 - 7995526
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  7995414 atctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccacactaaga 7995513  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||||||||    
T  7995514 cgggaaatcaaaa 7995526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14265555 - 14265439
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  14265555 ccggatctgcaacgttgacaacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcact 14265456  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  14265455 aagacgggaaatcaaaa 14265439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29205556 - 29205440
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| | ||| | |||||||||||||||||||||||||||    
T  29205556 ccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctgatcattcaacctgaatcaaataaacaccgcact 29205457  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  29205456 aagacgggaaatcaaaa 29205440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 42276622 - 42276510
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  42276622 atctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 42276523  T
Q  105 cgggaaatcaaaa 117  Q
     ||||||||||||    
T  42276522 tgggaaatcaaaa 42276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45750749 - 45750633
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||| | |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  45750749 ccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgcact 45750650  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  45750649 aagacgggaaataaaaa 45750633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18343883 - 18343768
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | | |||| |||||| ||||||| ||||||||||| |||||||||||||||    
T  18343883 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatc-aataaacaccgcact 18343785  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  18343784 aagacgggaaatcaaaa 18343768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 28677984 - 28678096
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||||||||||||||||||||||||| ||    
T  28677984 atctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcactagga 28678083  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||||||||    
T  28678084 cgggaaatcaaaa 28678096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51418255 - 51418139
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| | ||||||||||||||||||||||||     
T  51418255 ccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttccacctgaatcaaataaacaccgcaca 51418156  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  51418155 aagacggaaaatcaaaa 51418139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 29726452 - 29726563
Alignment:
Q  6 tctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||||||||||||||||||||||| ||||||| |||||||| | |||||||||| || ||||||| ||||||||||||| ||||||||||| ||||||    
T  29726452 tctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcagagctaatctttcaacctgaatcaattaaacaccgcattaagac 29726551  T
Q  106 gggaaatcaaaa 117  Q
    ||||||||||||    
T  29726552 gggaaatcaaaa 29726563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 33486881 - 33486996
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||| |||||||| |||||| | ||||||| |||||||| | || ||||||||||||||| || ||||||||||||||||||||||||||||    
T  33486881 cggatctgcaacattgacgacaccaaagccattgtcattgatcggatttgcatttgctcaaagttaatttttcaacctgaatcaaataaacaccgcacta 33486980  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  33486981 agacgggaaatcaaaa 33486996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45193478 - 45193593
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||   ||||||||||||| ||||||| |||||||| |||||||||||||| |||    
T  45193478 ccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatcagcacttgctcaaagctaatctttcaacctgattcaaataaacaccgtact 45193577  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||||||||||||    
T  45193578 aagacgggaaatcaaa 45193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32784350 - 32784233
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| |||| || ||||| || | ||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  32784350 ccggatctgcaacgttgacgacgctaaagtcattgttattgatcgaatttgcacttgctcaaagctaatctttcagcctgaatcaaataaacaccgcact 32784251  T
Q  101 aagacgggaaatcaaaag 118  Q
    ||||||| ||||||||||    
T  32784250 aagacggaaaatcaaaag 32784233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3233059 - 3232943
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | ||||| ||||||| ||||||| |||||||||||||||||||| ||||||    
T  3233059 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacatcgcact 3232960  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  3232959 aagacggaaaataaaaa 3232943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4882209 - 4882325
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| || |||| |||||||| | ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  4882209 ccggatctgcaacgttgacgatgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 4882308  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| | |||||||||    
T  4882309 aagacagaaaatcaaaa 4882325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 13488392 - 13488502
Alignment:
Q  7 ctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacg 106  Q
    ||||||||||||||||||||||||| ||||||| |||||||| | | |||| |||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  13488392 ctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaattaaataaacaccgcactaagacg 13488491  T
Q  107 ggaaatcaaaa 117  Q
    |||||| ||||    
T  13488492 ggaaataaaaa 13488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10627266 - 10627155
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  10627266 atctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctt-caacctgaatcaaataaacaccgcactatga 10627168  T
Q  105 cgggaaatcaaaa 117  Q
    ||| |||| ||||    
T  10627167 cggaaaataaaaa 10627155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37822196 - 37822311
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||| | ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||| || |||||    
T  37822196 ccggatctgcaacgttgacgacaccaaagacattgtcattgatcggatctgcacttgctcaaag-taatctttcaacctgaatcaaataaatactgcact 37822294  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  37822295 aagacgggaaataaaaa 37822311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4870883 - 4870999
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||| | ||||||||||||| |||| || ||| |||||||||||||||||||||||    
T  4870883 ccggatctacaacgttgacgacgccgaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaatctgaatcaaataaacaccgcact 4870982  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| | ||||| ||||    
T  4870983 aagatgagaaataaaaa 4870999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27534968 - 27534852
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| |||| || |||| ||| | | |||| |||||| ||||||| |||||||||||||||||||| | ||||    
T  27534968 ccggatctgcaacgttgacgacgctaaagtcattgttattgatcagatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacatcacact 27534869  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  27534868 aagacgggaaatcaaaa 27534852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9298272 - 9298382
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||| ||||||||| ||||||||| |||      ||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9298272 ccggatctgcatcgttgacgatgccaaagtcattg------atcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 9298365  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||| ||||    
T  9298366 aagatgggaaataaaaa 9298382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 17347853 - 17347752
Alignment:
Q  16 tgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    |||| ||||||||||| ||||||| ||||| || | ||||| ||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  17347853 tgacaacgccaaagtcattgtcattgatcgaatctgcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagacgggaaatcaa 17347754  T
Q  116 aa 117  Q
    ||    
T  17347753 aa 17347752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32878973 - 32878863
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| ||||||||||||| |||||||| |||      ||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||| |||    
T  32878973 ccggatctacaacgttgacgacaccaaagtcattg------atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgtact 32878880  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  32878879 aagacggaaaatcaaaa 32878863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33938863 - 33938979
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||| |||| |  |||||||||||| ||||||| |||||| || ||||||| |||||||||    
T  33938863 ccggatctggaacgttgacgacgacaaagtcattgtcattgattggatctgtacttgctcaaagctaatctttcaacctaaaccaaataagcaccgcact 33938962  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  33938963 aagacggaaaataaaaa 33938979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 15791128 - 15791227
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||| ||||||||| ||||||| |||  ||| | || ||  |||||| ||||||| ||||||||||||||||||||||||||||||    
T  15791128 gatctgcaacgttgacgatgccaaagtcattgtcattgataagatttgcatttcttcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 15791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 20411786 - 20411727
Alignment:
Q  58 ctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20411786 ctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 20411727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 42491130 - 42491048
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||| ||| | ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  42491130 gtcattgatctgatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagacgagaaatcaaaa 42491048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 424145 - 424257
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||| ||  | ||||||| ||||| || | ||||||  ||||||||||||| ||||||  ||||||||||||||| |||||||    
T  424145 atctgcaacgttgacgacgcctaacccattgtcattgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaaga 424244  T
Q  105 cgggaaatcaaaa 117  Q
    ||| |||| ||||    
T  424245 cggaaaataaaaa 424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47551360 - 47551250
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||||||| |||      || |||| | ||||||||||||| ||||||| |||||| |||||| ||||||| |||||    
T  47551360 ccggatctgcaacgttgacgacgtcaaagtcattg------attggatctgcacttgctcaaagctaatctttcaacctaaatcaattaaacacagcact 47551267  T
Q  101 aagacgggaaatcaaaa 117  Q
     ||||||||||| ||||    
T  47551266 gagacgggaaataaaaa 47551250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 12871884 - 12871776
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||| ||||||||| |||      |||| || | ||||||||||||| ||||||| |||||| ||||||||||||| ||||||||    
T  12871884 ggatctgcaacgttgacgatgccaaagtcattg------atcgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaacgcactaa 12871791  T
Q  103 gacgggaaatcaaaa 117  Q
    || | ||||| ||||    
T  12871790 gatgagaaataaaaa 12871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 32301559 - 32301493
Alignment:
Q  51 acacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  32301559 acacttgatcaaagctaatctttcaacctgaatcaaataaacaccgcattaagacgagaaataaaaa 32301493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 13869875 - 13869802
Alignment:
Q  34 tgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgg 107  Q
    |||||| ||| |||| |||||||| |||||  ||||||| |||||| |||||||||||||||||||||||||||    
T  13869875 tgtcattgattggatctacacttgttcaaaactaatctttcaacctaaatcaaataaacaccgcactaagacgg 13869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 25032989 - 25033054
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||||  |||||||||||||||||||||| || ||||| |||||| |||||    
T  25032989 cacttgctcaaagttaatctcacaacctgaatcaaataaacaccacattaagatgggaaaacaaaa 25033054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 13999183 - 13999132
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacg 106  Q
    |||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  13999183 ttgctcaaagttaatcttacaacctgaatcaaataaacatcgtactaagacg 13999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 8737570 - 8737517
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  8737570 cacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 26097906 - 26097971
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||| |||| || |||||||||||||||||| |||| |||||||||  |||||||||    
T  26097906 cacttgctcaaagctaatttttcaacctgaatcaaataaataccgtactaagacgaaaaatcaaaa 26097971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 10304798 - 10304734
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||| ||||||| |||| || |||| ||||||||||||||||| |||||||||| |||||||||    
T  10304798 cactttctcaaagctaatatttcaacttgaatcaaataaacaccacactaagacgagaaatcaaa 10304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 50107845 - 50107881
Alignment:
Q  81 aatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||||||||||||||||||||||||||||    
T  50107845 aatcaaataaacaccgcactaagacgggaaatcaaaa 50107881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 31427051 - 31427098
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcac 99  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  31427051 cacttgatcaaagttaatctttcaacctgaatcaaataaacactgcac 31427098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 2513484 - 2513554
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    ||||| ||| |||||| |||  |||||||||||||||| ||  |||||||||| |||||||||||||||||    
T  2513484 gtcattgattggatatgcacccgctcaaagttaatctttcagtctgaatcaaacaaacaccgcactaagac 2513554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 28399213 - 28399295
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| ||| |||| | ||||||||||||| |||| || |||| ||||||||||||| |||||| |||||| |||||| ||||    
T  28399213 gtcattgattggatctgcacttgctcaaagctaatatttcaacatgaatcaaataaataccgcattaagacaggaaataaaaa 28399295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 38783287 - 38783222
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| |||||||||||||| ||| ||| |||||||||||| | |||||||||| ||||| ||||    
T  38783287 cacttgatcaaagttaatctttcaaactggatcaaataaacatcacactaagacgagaaataaaaa 38783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 39080814 - 39080879
Alignment:
Q  50 tacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    ||||||||||||||  |||||||  ||| |||||||||||||||| |||||||||||  |||||||    
T  39080814 tacacttgctcaaaactaatcttttaacatgaatcaaataaacactgcactaagacgaaaaatcaa 39080879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 40646744 - 40646707
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40646744 tgaatcaaataaacaccgcacgaagacgggaaatcaaa 40646707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 3101892 - 3101836
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||| |||||||||||||||||| || ||||  |||||||||||||| |||||||||    
T  3101892 atatgcacttgctcaaagttaatatttcaactcgaatcaaataaacatcgcactaag 3101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 29069737 - 29069808
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaaca-ccgcactaagacgggaaatcaaaa 117  Q
    |||| |||||| ||||| |||||||| ||| |||||||||||||||| || |||||| ||| ||||||||||    
T  29069737 atatgcacttgatcaaaattaatctttcaatctgaatcaaataaacacccccactaaaacgagaaatcaaaa 29069808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 10782726 - 10782680
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    |||| ||||||||||||||||||||| |||||  |||||||||||||    
T  10782726 atatccacttgctcaaagttaatctttcaaccaaaatcaaataaaca 10782680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 5701333 - 5701296
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  5701333 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 5701296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 19715902 - 19715939
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  19715902 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 19715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 29551645 - 29551710
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaat 112  Q
    |||| |||||| |||||  |||| || |||||| ||||||||||||||| |||||||| |||||||    
T  29551645 atatgcacttgatcaaaactaatatttcaaccttaatcaaataaacaccacactaagaagggaaat 29551710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 31836881 - 31836844
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  31836881 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 31836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 40881019 - 40881056
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  40881019 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 40881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 50148444 - 50148407
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  50148444 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 50148407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 50272147 - 50272184
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  50272147 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 50272184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 29938429 - 29938393
Alignment:
Q  81 aatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  29938429 aatcaaataaacaccgcactaggacgagaaatcaaaa 29938393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31270597 - 31270481
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  31270597 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcgaataaacaccgcact 31270498  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  31270497 aagacgggaaatcaaaa 31270481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49627953 - 49628069
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  49627953 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgcact 49628052  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  49628053 aagacgggaaatcaaaa 49628069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 54706573 - 54706689
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  54706573 ccggatctgcaacgttgacgacgccaaagccattgtcattgatcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgcact 54706672  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  54706673 aagacgggaaatcaaaa 54706689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 53402890 - 53402776
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  53402890 ggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacagcgcactaa 53402791  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  53402790 gacgggaaatcaaaa 53402776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 14585730 - 14585617
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| | ||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  14585730 gatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaag 14585631  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  14585630 acgggaaatcaaaa 14585617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36624553 - 36624669
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||| | ||||||| |||||||| | |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  36624553 ccggatctgcaacgttgacgatgccaaagccattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcact 36624652  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  36624653 aagacgggaaatcaaaa 36624669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53155288 - 53155404
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  53155288 ccggatctgcaaagttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcact 53155387  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  53155388 aagacggaaaatcaaaa 53155404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 22485235 - 22485120
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||||||||||||| |||||||||||| ||||||| || ||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22485235 cggatctgcaacgttgaggacgccaaagtcattgtcattgaccggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcacta 22485136  T
Q  102 agacgggaaatcaaaa 117  Q
    |||||| |||||||||    
T  22485135 agacggaaaatcaaaa 22485120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 40883725 - 40883840
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  40883725 cggatctgcaacgtcgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaagaaacaccgcacta 40883824  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  40883825 agacgggaaatcaaaa 40883840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1074752 - 1074868
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||| |||||||||||| |||  ||||    
T  1074752 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataatcactacact 1074851  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  1074852 aagacgggaaatcaaaa 1074868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 35174975 - 35174863
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||| |||||||||||| ||||||| ||||  |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  35174975 atctgcaacgttgatgacgccaaagtcattgtcattgatcaaatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 35174876  T
Q  105 cgggaaatcaaaa 117  Q
    ||||||| |||||    
T  35174875 cgggaaagcaaaa 35174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40013130 - 40013246
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||| | || | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  40013130 ccggatctgcaacgttgacgacgtcaaagtcattgtcattgattgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 40013229  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||||||||    
T  40013230 aagatgggaaatcaaaa 40013246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48401133 - 48401017
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| |||||||  |||||||||||||||||||||||||     
T  48401133 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaacaccgcaca 48401034  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||| ||||    
T  48401033 aagactggaaattaaaa 48401017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 48652298 - 48652414
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||| | | |||| |||||||||||||| |||||| ||||||||||||||||||||    
T  48652298 ccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcact 48652397  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  48652398 aagacgggaaataaaaa 48652414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 11819353 - 11819238
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||| | | || |||||| ||||||| ||||||||||||||||||||||||||||    
T  11819353 cggatctgcaacgttgacgacgccaaagtcattgttattgatcggatatgctcctgttcaaagctaatctttcaacctgaatcaaataaacaccgcacta 11819254  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||| ||||    
T  11819253 agacgggaaataaaaa 11819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 36691660 - 36691773
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  36691660 gatctgcaacgttgacgacgccaaagtcattgtcattgatcgaatatgcacttgcgcaaagttaatctttcaacctggatcaaataaacaccgtactaag 36691759  T
Q  104 acgggaaatcaaaa 117  Q
    |||| |||| ||||    
T  36691760 acggaaaataaaaa 36691773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 54238882 - 54238992
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||  ||||||| |||||||||||||||  ||||||||||||||    
T  54238882 atctgcaacgttgacaacgccaaagtcattgtcattgatcggatatgcacttgctcaaatctaatctttcaacctgaatcaaat--acaccgcactaaga 54238979  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||||||||    
T  54238980 cgggaaatcaaaa 54238992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 33637673 - 33637558
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| || |||| |||||||| | |  ||| |||||| ||||||| |||||| |||||||||||||||||||||    
T  33637673 cggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgcttttgttcaaagctaatctttcaacctaaatcaaataaacaccgcacta 33637574  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  33637573 agacgggaaatcaaaa 33637558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 3457208 - 3457094
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||| | ||||||||||||| ||||||| |||| |||||||||||||||||| |||||    
T  3457208 ggatctgcaatgttgacgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgtactaa 3457109  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  3457108 gacgggaaataaaaa 3457094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 31462606 - 31462708
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  31462606 ggatctgcaccgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacgccgcactaa 31462705  T
Q  103 gac 105  Q
    |||    
T  31462706 gac 31462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 27189265 - 27189373
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||| |||||||||||||||||||||  |||||| |||| ||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||| |||    
T  27189265 gatctgtaacgttgacgacgccaaagtcaatgtcattgatcagatctacacttgctcaaagctaatctttcaacctgaataaaataaacaccgcaccaag 27189364  T
Q  104 acgggaaat 112  Q
    |||||||||    
T  27189365 acgggaaat 27189373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48855148 - 48855032
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||| ||||||||||||||||| ||||    
T  48855148 ccggatctgcaacggtgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccacact 48855049  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  48855048 aagacggaaaataaaaa 48855032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 19645461 - 19645347
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||| | | ||||||||    
T  19645461 cggatctgcaatattgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaat-agctccgcacta 19645363  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  19645362 agacgggaaatcaaaa 19645347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 55446328 - 55446219
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| ||||||| ||| |||| | ||||||||||||| ||||| | ||| ||||||||||||||| |||||||    
T  55446328 ccggatctgcaacgttgacgacgctaaagtcattgtcattgattggatctgcacttgctcaaagctaatccttcaatctgaatcaaataaaccccgcact 55446229  T
Q  101 aagacgggaa 110  Q
    ||||||||||    
T  55446228 aagacgggaa 55446219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19861137 - 19861253
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| |||| |||||||||||||||||| || ||||||||||||| ||||||  |||||    
T  19861137 ccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcgaatatgcacttgctcaaagttaatatttcaacctgaatcaagtaaacattgcact 19861236  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||| ||||    
T  19861237 aagactggaaataaaaa 19861253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30156139 - 30156255
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| |||||||||||||| || |||| || |||||||| |  |||||||||||| |||| || ||||| |||||||||||||||||||||    
T  30156139 ccggatctgcaaccttgacgacgccaaaatcattgttattgatcggatctgaacttgctcaaagctaatttttcaaccagaatcaaataaacaccgcact 30156238  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  30156239 aagacgggaaataaaaa 30156255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48401389 - 48401268
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatctt-----ccaacctgaatcaaataaacacc 95  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||| | ||||||||||||| |||||||     | ||||||||| |||||||||||    
T  48401389 ccggatctgcaacgttgacgacgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatcttttaacctaacctgaattaaataaacacc 48401290  T
Q  96 gcactaagacgggaaatcaaaa 117  Q
    |||| ||||| |||||||||||    
T  48401289 gcacaaagactggaaatcaaaa 48401268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 55455142 - 55455030
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatgg------atcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacac 94  Q
    |||||||||||||||| |||||||||||||| ||||||| |      ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||    
T  55455142 ccggatctgcaacgttaacgacgccaaagtcattgtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacac 55455043  T
Q  95 cgcactaagacgg 107  Q
    |||||||||||||    
T  55455042 cgcactaagacgg 55455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13701864 - 13701975
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||| || ||||| |||||||| ||||||| |||| ||| | ||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||    
T  13701864 atctgcaac-ttaacgacaccaaagtcattgtcattgatcagatttgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactagga 13701962  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||||||||    
T  13701963 cgggaaatcaaaa 13701975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32080612 - 32080728
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||| | | |||| |||||| ||||| | ||| |||||||||||||||| ||||||    
T  32080612 ccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatcattcaagctgaatcaaataaacatcgcact 32080711  T
Q  101 aagacgggaaatcaaaa 117  Q
    | |||| ||||||||||    
T  32080712 atgacgagaaatcaaaa 32080728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45047785 - 45047669
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| || | |||||||| |||| ||||||| ||| |||||| ||||||||||||||||    
T  45047785 ccggatctgcaacgttgacgacgccgaagtcattgtcattgatcgaatctgcacttgctaaaagctaatctttcaatctgaataaaataaacaccgcact 45047686  T
Q  101 aagacgggaaatcaaaa 117  Q
    || | | ||||||||||    
T  45047685 aaaatgagaaatcaaaa 45047669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 34103610 - 34103720
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||| | |||||||||||  | |||||| | ||||||||||||||||||||||||||| |    
T  34103610 atctgcaacgttgacgacgctgaagtcattgtcattgatcggatctgcacttgctcaatct-aatctttcgacctgaatcaaataaacaccgcactaaaa 34103708  T
Q  105 cgggaaatcaaa 116  Q
    ||||||||||||    
T  34103709 cgggaaatcaaa 34103720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41868181 - 41868297
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||| |||||||||||||||| || |||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||||||| | || ||||||     
T  41868181 ccggttctgcaacgttgacgatgctaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaaaatacgccgcaca 41868280  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  41868281 aagacggaaaatcaaaa 41868297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 39610477 - 39610366
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||| |||| |||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||| || ||||||||||||| || |||||||    
T  39610477 atctacaacattgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaatctaaatcaaataaacaacgtactaaga 39610378  T
Q  105 cgggaaatcaaa 116  Q
    || |||||||||    
T  39610377 cgagaaatcaaa 39610366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 53962338 - 53962275
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  53962338 cacttgctcaaagctaatcttttaacctgaatcaaataaacaccgcactaagacgggaaatcaa 53962275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 105927 - 106009
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||| ||||    
T  105927 gtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacgacactaagacgggaaataaaaa 106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 3961669 - 3961726
Alignment:
Q  50 tacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgg 107  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3961669 tacatttgctcaaagttaatcttacaacctgaatcaaataaacaccgcactaagacgg 3961726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 24483540 - 24483653
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||| |||||| ||||   |||||||||    
T  24483540 gatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaacctaaatcaagtaaatgtcgcactaag 24483639  T
Q  104 acgggaaatcaaaa 117  Q
    | || |||| ||||    
T  24483640 atggaaaataaaaa 24483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 4081978 - 4081910
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatc 70  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| | |||||| |||||| |||||    
T  4081978 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatc 4081910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 2147993 - 2147911
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac-gggaaatcaaaa 117  Q
    ||||| |||| ||| ||||||||||||||| |||||||| |||  |||||||||||||||||||||||||| ||||||||||||    
T  2147993 gtcattgatcagatctacacttgctcaaagataatcttc-aactcgaatcaaataaacaccgcactaagacggggaaatcaaaa 2147911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 47733743 - 47733851
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||| ||||||||||||||||| |||      || | |||| || |||||||||  |||| || |||||||||||||||||||||||||||||    
T  47733743 ggatctgcaactttgacgacgccaaagtcattg------attgaatatgcatttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaa 47733836  T
Q  103 gacgggaaatcaaaa 117  Q
    |||| ||||| ||||    
T  47733837 gacgagaaataaaaa 47733851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 3312671 - 3312599
Alignment:
Q  45 ggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||||||||||||| |||| || |||||||||||||||||||||||||  |||||| ||||| ||||    
T  3312671 ggatctacacttgctcaaagctaatatttcaacctgaatcaaataaacaccgcaagaagacgagaaattaaaa 3312599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34960760 - 34960806
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcgga 47  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  34960760 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcgga 34960806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 39429393 - 39429475
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| ||| |||| | |||||||||| || ||||||| |||||| ||| ||||||||||| |||||||| ||||||||||||    
T  39429393 gtcattgattggatttgcacttgctcagagctaatctttcaacctaaattaaataaacaccacactaagatgggaaatcaaaa 39429475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 31730875 - 31730811
Alignment:
Q  41 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||||| | |||||| |||||||||||||| |||| |||||||||||||||  ||||||||||    
T  31730875 gatcggatttgcacttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 31730811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 37451936 - 37451892
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaaaag 118  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  37451936 caacctgaatcaaataaacaccgcactaagatggaaaatcaaaag 37451892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38530212 - 38530165
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggat 48  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  38530212 ccggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggat 38530165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 20044752 - 20044798
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||    
T  20044752 atatgcacttgctcaaaactaatcttccaacctgaatcaaataaaca 20044798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 41598369 - 41598439
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| || ||||||||||||||| |||| | ||||||||||||| |  |||||||||| |||||||||    
T  41598369 atatacattttctcaaagttaatctttcaacttaaatcaaataaacatcatactaagacggaaaatcaaaa 41598439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 5327382 - 5327427
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgc 97  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  5327382 cacttgatcaaaattaatctttcaacctgaatcaaataaacaccgc 5327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 55090521 - 55090557
Alignment:
Q  81 aatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||||||||||||||| ||||||||||||    
T  55090521 aatcaaataaacaccgcactaagatgggaaatcaaaa 55090557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 32408733 - 32408784
Alignment:
Q  66 taatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||    
T  32408733 taatctttcaacccgaatcaaataaacaccgtactgagacaggaaatcaaaa 32408784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 40702647 - 40702604
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||    
T  40702647 caacctgaatcaaataaacactgcactaaaacggaaaatcaaaa 40702604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 40716433 - 40716390
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||    
T  40716433 caacctgaatctaataaacactgcactaagacggaaaatcaaaa 40716390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4019863 - 4019833
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtc 31  Q
    |||||||||||||||||||||||||||||||    
T  4019863 ccggatctgcaacgttgacgacgccaaagtc 4019833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 48822287 - 48822245
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||| |||||| |||||||||||||| ||||||    
T  48822287 tcaaagttaatctttcaaccttaatcaaataaacactgcacta 48822245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 12116165 - 12116128
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  12116165 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 12116128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 21488158 - 21488121
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  21488158 tgaatcaaataaacaccgcaagaagacgggaaatcaaa 21488121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 32607536 - 32607499
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32607536 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 32607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 35499205 - 35499242
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  35499205 tgaatcaaatgaacaccgcacaaagacgggaaatcaaa 35499242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 53427062 - 53427033
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtc 31  Q
    ||||||||||||||||||||||||||||||    
T  53427062 cggatctgcaacgttgacgacgccaaagtc 53427033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 34960832 - 34960868
Alignment:
Q  81 aatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  34960832 aatcaaataaacaccgcacaaagacgagaaatcaaaa 34960868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 40401415 - 40401451
Alignment:
Q  57 gctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    ||||||||||||| || ||||||||||||||||||||    
T  40401415 gctcaaagttaatatttcaacctgaatcaaataaaca 40401451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 48212577 - 48212501
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaa 111  Q
    ||||| ||| |||| | |||||||||| || ||||| | ||| ||||||| ||||||||| ||||||||||| ||||    
T  48212577 gtcattgattggatctgcacttgctcagagctaatccttcaatctgaatctaataaacactgcactaagacgagaaa 48212501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4757436 - 4757320
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  4757436 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcact 4757337  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  4757336 aagacgggaaatcaaaa 4757320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11162154 - 11162038
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11162154 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 11162055  T
Q  101 aagacgggaaatcaaaa 117  Q
      |||||||||| ||||    
T  11162054 gcgacgggaaataaaaa 11162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31407606 - 31407722
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  31407606 ccggatctgcaatgttgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 31407705  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||||||||    
T  31407706 aagacaggaaatcaaaa 31407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37612924 - 37612808
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||| | || |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  37612924 ccggatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcaattgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 37612825  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  37612824 aagacgggaaatcaaaa 37612808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 7579715 - 7579829
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||| ||||||||||||| |||||||  ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7579715 ggatctgcaacgttggcgacgccaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 7579814  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  7579815 gacgggaaataaaaa 7579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9501857 - 9501741
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| ||||||||||||||  |||||||||||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||     
T  9501857 ccggatttgcaacgttgacgaaaccaaagtcgttgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcaca 9501758  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  9501757 aagacgggaaataaaaa 9501741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10338680 - 10338796
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||| | ||||||||||||| |||| || |||| ||||||||||||||||||||||    
T  10338680 ccggatctgcaacgttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaagctaatttttcaacttgaatcaaataaacaccgcact 10338779  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  10338780 aagacgggaaataaaaa 10338796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12329898 - 12329782
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||| |||||||||||||||||| |    
T  12329898 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctaaatcaaataaacaccgcatt 12329799  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  12329798 aagacgggaaataaaaa 12329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 3204644 - 3204759
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||| ||||||||||| |||| ||  ||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  3204644 cggatctgcaacgttgaccacgccaaagtcattgtgatttatcggatatgcacttgctcaaagttaatctttcaacttgaatcaaataaacactgcacta 3204743  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||| ||||||||||    
T  3204744 agacgagaaatcaaaa 3204759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 14600558 - 14600661
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14600558 ggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 14600657  T
Q  103 gacg 106  Q
    ||||    
T  14600658 gacg 14600661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 43937049 - 43937151
Alignment:
Q  15 ttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatca 114  Q
    |||||||||| ||| || ||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43937049 ttgacgacgctaaaatcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatca 43937148  T
Q  115 aaa 117  Q
    |||    
T  43937149 aaa 43937151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1810080 - 1810196
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||| ||||| ||||||| ||||||| |||||||| ||||||||||||||  ||||||| |||||||||||||||||||| ||| ||    
T  1810080 ccggatctgcaacgttggcgacgtcaaagtcattgtcattgatcggatttacacttgctcaaaactaatctttcaacctgaatcaaataaacatcgcgct 1810179  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||||| |||||||    
T  1810180 aagacgggacatcaaaa 1810196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24700103 - 24699987
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||| |||  |||||| |||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||    
T  24700103 ccggatctgcaacgttgacgacgacaatgtcaatgtcattgatcggatctgcatttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 24700004  T
Q  101 aagacgggaaatcaaaa 117  Q
    || ||||||||| ||||    
T  24700003 aacacgggaaataaaaa 24699987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37128346 - 37128461
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||||||||||||||||| |||| || |||||||| | ||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  37128346 ccggatctgcaa-gttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcact 37128444  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  37128445 aagacggaaaatcaaaa 37128461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10148216 - 10148101
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||| | ||||||||||||| |||| || ||||||||||||||||||||||| |||    
T  10148216 ccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgtact 10148117  T
Q  101 aagacgggaaatcaaa 116  Q
    |||| | |||||||||    
T  10148116 aagatgagaaatcaaa 10148101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30026740 - 30026855
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| || ||||||||| ||||||| |||| ||  | ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  30026740 ccggatctgcaacgttgaagatgccaaagtcattgtcattgatcagacctgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccgcact 30026839  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||||||||||||    
T  30026840 aagacgggaaatcaaa 30026855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 24791028 - 24791142
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||| |||||||||||||  |||||    
T  24791028 ggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgattcaaataaacaccaaactaa 24791127  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  24791128 gacgggaaattaaaa 24791142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 31202727 - 31202613
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||| |||||||||||| ||||||| ||||||| |||| ||| | |||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  31202727 ggatctgcgacgttgacgacgtcaaagtcattgtcattgatcagatctgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcactaa 31202628  T
Q  103 gacgggaaatcaaaa 117  Q
    ||| |||||||||||    
T  31202627 gactggaaatcaaaa 31202613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 39067549 - 39067663
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||| |||||| |||||||||||||||||    
T  39067549 ggatctgcaacgttggcgacgccaaagtcattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacatgaatctaataaacaccgcactaa 39067648  T
Q  103 gacgggaaatcaaaa 117  Q
    ||||| |||| ||||    
T  39067649 gacggaaaataaaaa 39067663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 41362001 - 41361887
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||| ||||||||||| |||||||| ||| ||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  41362001 ggatctgcgacgttgacgacaccaaagtcattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 41361902  T
Q  103 gacgggaaatcaaaa 117  Q
     ||||||||| ||||    
T  41361901 aacgggaaataaaaa 41361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2234328 - 2234444
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||  |||| || |||| || |||||||| | ||||||||||||| |||| || |||||||||||||||||||||||||||    
T  2234328 ccggatctgcaacgttgacgacatcaaattcattgttattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcaaataaacaccgcact 2234427  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  2234428 aagacggaaaatcaaaa 2234444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2025082 - 2025188
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| |||| | || ||||||| |||||||| | ||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  2025082 ccggatctgcaacgttgacgatgccagaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcact 2025181  T
Q  101 aagacgg 107  Q
    |||||||    
T  2025182 aagacgg 2025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 24210510 - 24210408
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| |||| |  |||||||| |||||||| |||||| ||||||| |||||||||||||||||| ||||||||||    
T  24210510 ggatctgcaacgttgacgacgccaaagtctttgtgaatgatcggatctacacttgttcaaagctaatctttcaacctgaatcaaataaataccgcactaa 24210411  T
Q  103 gac 105  Q
    |||    
T  24210410 gac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31308419 - 31308303
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| | |||||| |||||  || |||| |||||||||| ||||||||| || |||    
T  31308419 ccggatctgcaacgttgacgacaccaaagtcgttgtcattgatcggatctgcacttgttcaaaactattctttcaacctgaattaaataaacatcgtact 31308320  T
Q  101 aagacgggaaatcaaaa 117  Q
    || ||||||||||||||    
T  31308319 aaaacgggaaatcaaaa 31308303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13570597 - 13570715
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| |||| || |||| ||| | ||||||||||||| ||||||| |||| ||||||||||||||||| ||||    
T  13570597 ccggatctgcaacgttgacgatgccaaagtcattgtaattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccacact 13570696  T
Q  101 aag--acgggaaatcaaaa 117  Q
    |||  ||||||||||||||    
T  13570697 aagacacgggaaatcaaaa 13570715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22787761 - 22787647
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||||||||||||||||| || |||| |||||  | | || || ||||||| ||||||| |||||||||||||||||||||||||||    
T  22787761 ccggatctgcaatgttgacgacgccaaagtcattctcattgatcg--tctgcatttactcaaagctaatctttcaacctgaatcaaataaacaccgcact 22787664  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  22787663 aagacggaaaatcaaaa 22787647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 19720279 - 19720164
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||| ||||||| |||| || |||||||  | ||||||||||||| ||||||| |||||||||||||||||  |||||| ||    
T  19720279 cggatctgcaacgttgacgacgtcaaagtcattgttattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataattaccgcatta 19720180  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||| ||||| ||||    
T  19720179 agacgagaaataaaaa 19720164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38546012 - 38546115
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||||||| ||  |||||| |||||||||| || ||| |||||||||||||| ||| |||||||||||||||| || |||    
T  38546012 ccggatctgcaacgttgacgacgccaaa-tctatgtcattgatcggatatgcatttggtcaaagttaatctttcaatctgaatcaaataaacatcgtact 38546110  T
Q  101 aagac 105  Q
    |||||    
T  38546111 aagac 38546115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13576058 - 13576168
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| |||| || |||||||||||||      ||||||| | ||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  13576058 ccggatctgcaacattgaagatgccaaagtcgttg------atcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaacaccgcact 13576151  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  13576152 aagacggaaaataaaaa 13576168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 28296989 - 28297081
Alignment:
Q  25 caaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| || |||| |||||||| | || |||||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  28296989 caaagtcattttcattgatcggatctgcagttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaagatgggaaatcaaaa 28297081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 32778849 - 32778925
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaa 111  Q
    ||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  32778849 gtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcattaagatgggaaa 32778925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10334441 - 10334331
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| |||      ||||||| | || |||||||||| |||| || ||| |||||||||||||||||||||||    
T  10334441 ccggatctgcaacgttgacgatgccaaagtcattg------atcggatctgcatttgctcaaagctaatatttcaatctgaatcaaataaacaccgcact 10334348  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| || |||||||    
T  10334347 aagacgagagatcaaaa 10334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 10633088 - 10633153
Alignment:
Q  50 tacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    |||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  10633088 tacacttgatcaaagctaatctttcaacctgaataaaataaacaccgcactaagacggaaaatcaa 10633153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 2968769 - 2968687
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| | |||||||||||||   ||||| |||||||||||||||||| ||||||||||||||| |||| ||||    
T  2968769 gtcattgatcggatttgcacttgctcaaagcggatctttcaacctgaatcaaataaataccgcactaagacggaaaataaaaa 2968687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 1039811 - 1039868
Alignment:
Q  60 caaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  1039811 caaagctaatctttcaacctggatcaaataaacaccgcactaagacgggaaataaaaa 1039868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 23971043 - 23971112
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatctt 72  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| |||||||    
T  23971043 ggatttgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctt 23971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40490374 - 40490442
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaat 69  Q
    ||||||||||||| |||||||||| |||||| ||||||| |||||||| || |||||||||||| ||||    
T  40490374 ccggatctgcaacattgacgacgctaaagtcattgtcattgatcggatctatacttgctcaaagctaat 40490442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 19489049 - 19488984
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  |||| ||||| |||| ||||    
T  19489049 cacttgatcaaagttaatctttcaacctgaatcaaataaacaccagactatgacggaaaataaaaa 19488984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 20993024 - 20992962
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||| || ||||| |||||||||||||| | |||||| ||||||||| ||||    
T  20993024 ttgctcaaagttaatttttcaaccagaatcaaataaacatcacactaaaacgggaaataaaaa 20992962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 4429286 - 4429216
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||| ||||||||||||||| |||||  ||||||||||||||| || ||| ||| ||||| ||||    
T  4429286 atatgcactttctcaaagttaatctttcaacccaaatcaaataaacaccacagtaacacgagaaataaaaa 4429216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 32726655 - 32726606
Alignment:
Q  53 acttgctcaaagttaa-tcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  32726655 acttgatcaaagttaagtcttc-aacctgaatcaaataaacaccgcactaa 32726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 44410727 - 44410784
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||||||||| |||||||||||||||||| |||| ||||| ||||||| ||||    
T  44410727 tcaaggttaatcttccgacctgaatcaaataaacaacgca-taagatgggaaataaaaa 44410784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 2655947 - 2655910
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  2655947 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 2655910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 9498606 - 9498643
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9498606 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 9498643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 9619364 - 9619401
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9619364 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 9619401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 23851501 - 23851538
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  23851501 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 23851538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 15288687 - 15288723
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcat 39  Q
    |||| |||||||||||||||||||||||| |||||||    
T  15288687 ggatttgcaacgttgacgacgccaaagtcattgtcat 15288723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 15469056 - 15469092
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcat 39  Q
    |||| |||||||||||||||||||||||| |||||||    
T  15469056 ggatttgcaacgttgacgacgccaaagtcattgtcat 15469092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1280987 - 1281103
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1280987 ccggatctgcaacgttgacgacgccaaagtcattgtcattgttcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgcact 1281086  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  1281087 aagacgggaaatcaaaa 1281103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21603731 - 21603615
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||  |||||| ||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  21603731 ccggatctgcaacgttgacgacgttaaagtcattgtcattgatcggatctgcactttctcaaagttaatctttcaacctgaatcaaataaacaccgcact 21603632  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  21603631 aagacgggaaatcaaaa 21603615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21990933 - 21990817
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||   ||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  21990933 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatcagcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcact 21990834  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  21990833 aagacgggaaatcaaaa 21990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24988330 - 24988446
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  24988330 ccggatctgcaacgttgacaacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 24988429  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||||||| |||||    
T  24988430 aagacgggaaaccaaaa 24988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 10094710 - 10094596
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||||||| ||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  10094710 ggatctgcaacgttaacgacaccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 10094611  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  10094610 gacgggaaatcaaaa 10094596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9785588 - 9785472
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9785588 ccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 9785489  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| | ||||||||||    
T  9785488 aagatgagaaatcaaaa 9785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36579191 - 36579307
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||| ||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||||    
T  36579191 ccggatctgcaacattgacgacgccaaagtcattgtcattgatcagatctacaattgctcaaagctaatctttcaatctgaatcaaataaacaccgcact 36579290  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  36579291 aagacgggaaatcaaaa 36579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 45457406 - 45457522
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||| |||    
T  45457406 ccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgtact 45457505  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||||||||    
T  45457506 aagacgagaaatcaaaa 45457522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41288227 - 41288112
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||| |||    
T  41288227 ccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgtact 41288128  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||| ||||||||    
T  41288127 aagacggaaaatcaaa 41288112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 9719826 - 9719938
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||| |||||||| || ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9719826 gatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 9719925  T
Q  104 acgggaaatcaaa 116  Q
    |||| ||||||||    
T  9719926 acggaaaatcaaa 9719938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17509054 - 17509170
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||| ||||||||||||||||    
T  17509054 ccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcact 17509153  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  17509154 aagacggaaaatcaaaa 17509170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17544160 - 17544044
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||| ||||||||||||||||    
T  17544160 ccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcact 17544061  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  17544060 aagacggaaaatcaaaa 17544044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26161222 - 26161106
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||| ||| |||||||    
T  26161222 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaatgaaccccgcact 26161123  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| | |||||||||    
T  26161122 aagacagaaaatcaaaa 26161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 28664795 - 28664907
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  28664795 atctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaaga 28664894  T
Q  105 cgggaaatcaaaa 117  Q
    ||| |||||||||    
T  28664895 cggaaaatcaaaa 28664907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45482335 - 45482219
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  45482335 ccggatctgcaacgttgacagcgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcact 45482236  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  45482235 aagacgggaaataaaaa 45482219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3266657 - 3266542
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| ||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||| |||    
T  3266657 ccggatctacaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgtact 3266558  T
Q  101 aagacgggaaatcaaa 116  Q
    |||||| |||||||||    
T  3266557 aagacgagaaatcaaa 3266542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 17473604 - 17473718
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||| ||||||||||||||| ||    
T  17473604 ggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcacaaa 17473703  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  17473704 gacgggaaatcaaaa 17473718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 17579610 - 17579496
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||| ||||||||||||||| ||    
T  17579610 ggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcacaaa 17579511  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  17579510 gacgggaaatcaaaa 17579496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 24320076 - 24320189
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24320076 gatctgcaatgttgacgacaccaaagtcattgtcatagatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 24320175  T
Q  104 acgggaaatcaaaa 117  Q
    |||| |||| ||||    
T  24320176 acggaaaataaaaa 24320189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 48304246 - 48304359
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatg-gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  48304246 atctgcaacgttgacgacgccaaagtcattgtcattcgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 48304345  T
Q  104 acgggaaatcaaaa 117  Q
    ||| ||||| ||||    
T  48304346 acgagaaataaaaa 48304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36253201 - 36253085
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||||||||||||||||||||  ||    
T  36253201 ccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgtcct 36253102  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||||||||    
T  36253101 aagatgggaaatcaaaa 36253085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 46025883 - 46025995
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||| |||| |||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  46025883 atctgcaacgttgacaacgctaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaaga 46025982  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||| ||||    
T  46025983 cgggaaataaaaa 46025995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 11833288 - 11833178
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||| ||||||| ||||||| |||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11833288 cggatctacaacgttaacgacgcaaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcacta 11833189  T
Q  102 agacgggaaat 112  Q
    ||||| |||||    
T  11833188 agacgagaaat 11833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39532825 - 39532941
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| ||||||||| |||||||| || |||| |||||||| | ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  39532825 ccggatctgcaatgttgacgactccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 39532924  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||| |||||||| ||||    
T  39532925 aaggcgggaaataaaaa 39532941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42644943 - 42644827
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||| |  |||||||||||| |||| || |||||||||| ||||||||||||||||    
T  42644943 ccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgtacttgctcaaagctaatatttcaacctgaattaaataaacaccgcact 42644844  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  42644843 aagacggaaaataaaaa 42644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 10574649 - 10574536
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||| |||||||||||||||||| ||||||    
T  10574649 gatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacatgaatcaaataaacaccgaactaag 10574550  T
Q  104 acgggaaatcaaaa 117  Q
    |||| |||| ||||    
T  10574549 acggaaaattaaaa 10574536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 42603622 - 42603735
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||| ||||||||||||  ||||||| ||||||| |||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||| |    
T  42603622 gatctgtaacgttgacgacatcaaagtcattgtcattgatcggatatgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactagg 42603721  T
Q  104 acgggaaatcaaaa 117  Q
    || |||||| ||||    
T  42603722 acaggaaataaaaa 42603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36719402 - 36719518
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| |||||||| |||||||||||| ||||||| |||| ||| |  |||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36719402 ccggatctggaacgttgatgacgccaaagtcattgtcattgatcagatctgtacttgctcaaagttaatctttcaacctgaatcaaataagcaccccact 36719501  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  36719502 aagacggaaaataaaaa 36719518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 43847337 - 43847225
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||  ||||||| |||||||||||||||||||||  ||||||||    
T  43847337 atctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctacacttgctcaaatctaatctttcaacctgaatcaaataaacacaacactaaga 43847238  T
Q  105 cgggaaatcaaaa 117  Q
     || |||| ||||    
T  43847237 tggaaaataaaaa 43847225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 2622862 - 2622747
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||||||| |||||||||||||||||  ||||||| ||| |||| | ||||||||||||||||||||| |||  ||||||||||||||||||||| |    
T  2622862 cggatctgcaatgttgacgacgccaaagttattgtcattgattggatctgcacttgctcaaagttaatctttcaatttgaatcaaataaacaccgcacaa 2622763  T
Q  102 agacgggaaatcaaaa 117  Q
    ||| ||||||| ||||    
T  2622762 agatgggaaataaaaa 2622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 6667665 - 6667550
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||| ||||||  |||||| |||| ||| |||| ||||||||||||||    
T  6667665 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgatcaaagccaatctttcaacttgagtcaattaaacaccgcacta 6667566  T
Q  102 agacgggaaatcaaaa 117  Q
    |||||| |||| ||||    
T  6667565 agacggaaaataaaaa 6667550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32741023 - 32740907
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| |||||||||  |||||||||| || ||||||| |||||||| | ||||||||||||  ||||||| |||||||||||||||| ||||| ||||    
T  32741023 ccggatttgcaacgttagcgacgccaaaatcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgaatcaaatagacaccacact 32740924  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  32740923 aagacgggaaataaaaa 32740907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40761859 - 40761743
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||||||||||| ||||||||| ||||||| |||||||| | |||||| |||||| |||| || |||||| ||||||||||||||||||||    
T  40761859 ccggatctgtaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatatttcaaccttaatcaaataaacaccgcact 40761760  T
Q  101 aagacgggaaatcaaaa 117  Q
    || ||| ||||| ||||    
T  40761759 aatacgagaaataaaaa 40761743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5684635 - 5684519
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||||||||||| | ||||||  ||| ||| |||||||| | ||||||||||||| ||||||| |||||||||||||| |||||||  |||    
T  5684635 ccggatctgtaacgttgacgatgtcaaagtaattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacaccatact 5684536  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  5684535 aagacggaaaatcaaaa 5684519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5709685 - 5709569
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||||||||||| | ||||||  ||| ||| |||||||| | ||||||||||||| ||||||| |||||||||||||| |||||||  |||    
T  5709685 ccggatctgtaacgttgacgatgtcaaagtaattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacaccatact 5709586  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||||||||    
T  5709585 aagacggaaaatcaaaa 5709569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 22747363 - 22747475
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||||||||||||| || ||||||  |||| ||| | |||||||||| || ||||||| |||||| |||||| |||||||||| ||||||    
T  22747363 atctgcaacgttgacgacgccaaattcattgtcaatgatcagatctgcacttgctcagagctaatctttcaaccttaatcaattaaacaccgccctaaga 22747462  T
Q  105 cgggaaatcaaaa 117  Q
    |||||| ||||||    
T  22747463 cgggaactcaaaa 22747475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 15017228 - 15017342
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcat-ggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||| |||| || ||||||||||||||||||||||| |||||    
T  15017228 gatctgcaacgttgacgacgctaaagtcattgtcattggatcggagttgcacttactcaaagctaatatttcaacctgaatcaaataaacaccggactaa 15017327  T
Q  103 gacgggaaatcaaaa 117  Q
    || || |||| ||||    
T  15017328 gatggaaaataaaaa 15017342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21954674 - 21954773
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| |||      ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||  ||||    
T  21954674 ccggatctgcaacgttgacgacgccaaagtcattg------atcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacgacact 21954767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29352491 - 29352388
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| |||      |||| || ||||||||| ||||| ||||||| |||||||||||||||||||| ||||||    
T  29352491 ccggatctgcaacgttgacgacgcaaaagtcattg------atcgaatctacacttgcacaaagctaatctttcaacctgaatcaaataaacatcgcact 29352398  T
Q  101 aagacgggaa 110  Q
    ||||||||||    
T  29352397 aagacgggaa 29352388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44482723 - 44482807
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatca 85  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| |||| || ||||||||||||    
T  44482723 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaacctgaatca 44482807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 15674465 - 15674578
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||| ||||||| ||| ||||| | ||| | || | |||||||| |||| ||||||| |||||||||| ||||||||||| ||||||||    
T  15674465 atctgcaacgttgacaacgccaacgtcattgtcgttgattgaatttgcacttgctaaaagctaatctttcaacctgaataaaataaacaccacactaaga 15674564  T
Q  105 c-gggaaatcaaaa 117  Q
    | ||||||||||||    
T  15674565 cggggaaatcaaaa 15674578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 4621251 - 4621333
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| | |||||| |||||  ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  4621251 gtcattgatcggatctgcacttgttcaaaactaatctttcaacctgaatcaaataaacaccgcactaaaacgtgaaatcaaaa 4621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27535699 - 27535594
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| ||| ||| |||||||||||||| ||||||| | ||| |  | ||||||||||||| ||||||| |||| ||| ||||||||||||||||||    
T  27535699 ccggatctacaatgttaacgacgccaaagtcattgtcattggtcgaacctgcacttgctcaaagctaatctttcaacttgagtcaaataaacaccgcact 27535600  T
Q  101 aagacg 106  Q
     |||||    
T  27535599 tagacg 27535594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 38277105 - 38276999
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||||||||| |||      ||||||| |  |||||||||||| |||| || |||| |||||||||||||||  |||||||||    
T  38277105 atctgcaacgttgacgacgccaaagtcattg------atcggatttgaacttgctcaaagctaatatttcaacatgaatcaaataaacattgcactaaga 38277012  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||| ||||    
T  38277011 cgggaaataaaaa 38276999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 25112743 - 25112667
Alignment:
Q  41 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||| ||||||||||||||||||||| |||| | ||||||||||||| || ||||||||| ||||| ||||    
T  25112743 gatcggatatgcacttgctcaaagttaatctttcaacttaaatcaaataaacatcgtactaagacgtgaaataaaaa 25112667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 5238164 - 5238111
Alignment:
Q  61 aaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatca 114  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  5238164 aaagttaatctttcaacctgaatcaaataaataccgcaccaagacgggaaatca 5238111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32643239 - 32643170
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatc 70  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||| | |||||||| |||| |||||    
T  32643239 ccggatctgcaacgtggacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatc 32643170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 6496123 - 6496059
Alignment:
Q  41 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||||| | |||||| |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  6496123 gatcggatctgcacttgttcaaagttaatctttcaacctgaatcaaataaacattgcactaagac 6496059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9137221 - 9137125
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||||||||||  ||      |||| |||| ||||| ||||||| |||||||  ||||| ||||||||||||||| ||||    
T  9137221 ccggatctgcaacgttgacgacgccaaagtcaatg------atcgaatatgcactttctcaaagctaatcttttaaccttaatcaaataaacaccacact 9137128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 22493255 - 22493204
Alignment:
Q  51 acacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  22493255 acacttgctcaaagttaatctttcaacctgaatcaaataaagatcgcactaa 22493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 37593333 - 37593274
Alignment:
Q  58 ctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| |||| || ||||||||||||||||||||||||| ||||||||||||| ||||    
T  37593333 ctcaaagctaatatttcaacctgaatcaaataaacaccgcattaagacgggaaataaaaa 37593274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14657707 - 14657794
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacac 94  Q
    ||||||||||||| |||| |||||||||||| |||      |||| |||| || |||||||||||||||||| ||| |||||||||||||||||    
T  14657707 ccggatctgcaacattgatgacgccaaagtcattg------atcgaatatgcatttgctcaaagttaatctttcaatctgaatcaaataaacac 14657794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 27050367 - 27050429
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||| ||||||| | || |||||||||||||||||||||||||||| ||||| ||||    
T  27050367 ttgctcaaagctaatctttcgacatgaatcaaataaacaccgcactaagacgagaaataaaaa 27050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 37375935 - 37375997
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||| ||||||||| |||||||||||||||||||  ||||||||||||| |||| ||||    
T  37375935 ttgctcaatgttaatctttcaacctgaatcaaataaactacgcactaagacggaaaataaaaa 37375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 37714699 - 37714634
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||| |||||||| ||||||||||||||||||||  |||||||||||| |||| ||||    
T  37714699 cacttgatcaaaattaatctttcaacctgaatcaaataaacattgcactaagacggaaaataaaaa 37714634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 25531672 - 25531620
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||| ||||| | |||||| ||||||||||||||||||||||||    
T  25531672 cacttgctcaaagctaatcattcaaccttaatcaaataaacaccgcactaaga 25531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 31703433 - 31703363
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||  |||||| ||||||| ||| |||||||||||||| ||  ||||||||||| |||||||||    
T  31703433 atatacacttattcaaagctaatctttcaatctgaatcaaataaatactacactaagacggaaaatcaaaa 31703363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 43256460 - 43256516
Alignment:
Q  61 aaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||| || |||| ||||||||||||||||| ||||||||||| |||| ||||    
T  43256460 aaagttaatatttcaacttgaatcaaataaacacctcactaagacggaaaataaaaa 43256516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 5948815 - 5948878
Alignment:
Q  55 ttgctcaaagttaatcttc-caacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||  |||||| ||||||||||| ||| |||||||| || |||||||||    
T  5948815 ttgctcaaagttaatcttttcaacctaaatcaaataaataccacactaagaaggaaaatcaaaa 5948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 17223346 - 17223287
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaag 118  Q
    |||||| || |||| | ||||||||||||||| || ||||||||||| ||||||||||||    
T  17223346 tcaaagctagtctttctacctgaatcaaataatcatcgcactaagacaggaaatcaaaag 17223287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 4028394 - 4028336
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||||| |||| |||||||||||||||| ||| ||||| | ||||| ||||    
T  4028394 tcaaagttaatctttcaacttgaatcaaataaacacagcaataagatgagaaataaaaa 4028336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 9137625 - 9137563
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||  ||||||| ||| ||||||||||||||||  || |||||||||||||| ||||    
T  9137625 ttgctcaaaactaatctttcaaactgaatcaaataaacattgcgctaagacgggaaataaaaa 9137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 45949528 - 45949558
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtc 31  Q
    |||||||||||||||||||||||||||||||    
T  45949528 ccggatctgcaacgttgacgacgccaaagtc 45949558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 2843248 - 2843285
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  2843248 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 2843285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 14627886 - 14627923
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  14627886 tgaatcaaataaacaccgtactaagacgagaaatcaaa 14627923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 32684738 - 32684701
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32684738 tgaatcaaatgaacaccgcacaaagacgggaaatcaaa 32684701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 46822085 - 46822048
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  46822085 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 46822048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 46881398 - 46881334
Alignment:
Q  53 acttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||  |||| || |||||| |||||||||||||  |||||||||||| |||||||||    
T  46881398 acttgatcaaaactaatatttcaacctaaatcaaataaacattgcactaagacggaaaatcaaaa 46881334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 6e-43; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23101258 - 23101374
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||     
T  23101258 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaataccgcaca 23101357  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  23101358 aagacgggaaatcaaaa 23101374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21507687 - 21507803
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  21507687 ccggatctgtaacgttgacgacgccaaagtcattgtcattgatcggatcgacacttgctcaaagttaatctttcaacctgaatcaaaaacacaccgcact 21507786  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  21507787 aagacgggaaatcaaaa 21507803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23654521 - 23654405
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | | |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  23654521 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcact 23654422  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  23654421 aagacgggaaatcaaaa 23654405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31937270 - 31937383
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | |||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  31937270 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcact 31937369  T
Q  101 aagacgggaaatca 114  Q
    ||||||||||||||    
T  31937370 aagacgggaaatca 31937383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12481220 - 12481336
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||| | | |||| |||||||||||||| |||||| ||||||||||||||||||||    
T  12481220 ccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcact 12481319  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  12481320 aagacgggaaatcaaaa 12481336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15589958 - 15590074
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||||||||||| | ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||| |    
T  15589958 ccggatctgcaacattgacgacgccaaagccattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcatt 15590057  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  15590058 aagacgggaaatcaaaa 15590074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31705436 - 31705320
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||| | |||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  31705436 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcact 31705337  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||||||||    
T  31705336 aagacgagaaatcaaaa 31705320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35219763 - 35219879
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||||||||||||||||||||||||||    
T  35219763 ccggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcact 35219862  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  35219863 aagacgggaaataaaaa 35219879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1106717 - 1106833
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||| ||||||| |||||||||||||||||||| || |||    
T  1106717 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgtact 1106816  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||| ||||||    
T  1106817 aagacgggaagtcaaaa 1106833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2304688 - 2304804
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| | ||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  2304688 ccggatctgcaacgttgacaatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcact 2304787  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  2304788 aagacgggaaataaaaa 2304804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4394041 - 4393925
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||  |||| ||| | |||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  4394041 ccggatctgcaacgttgacgacgccaaagtcattgtcagtgatcagatctgcacttgatcaaagttaatctttcaacctgagtcaaataaacaccgcact 4393942  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||| ||||    
T  4393941 aagatgggaaataaaaa 4393925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8693504 - 8693620
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||| | |||||||| | ||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  8693504 ccggatctgcaacgttgacgacaccaaagtcattgtccttgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcact 8693603  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  8693604 aagacggaaaataaaaa 8693620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23637970 - 23638085
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||||| ||||||| |||||||  || ||||   || |||||||||| ||||||| |||||||||||||||||||||||||||    
T  23637970 ccggatctgcaacattgacgacgtcaaagtcattgtcatttattggatcagcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 23638069  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||||||||||||    
T  23638070 aagacgggaaatcaaa 23638085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6419708 - 6419824
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||| || | | ||||| ||||||| ||||||| ||||||||| ||||||||||  |||||    
T  6419708 ccggatctgcaactttgacgacgccaaagtcattgtcatcgattgggtctgcacttactcaaagctaatctttcaacctgaaccaaataaacattgcact 6419807  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  6419808 aagacgggaaataaaaa 6419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14782992 - 14783108
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||  || | ||||||||||||  ||||||| ||| || ||||||||| ||||| ||||    
T  14782992 ccggatctgcaacgttgacgacaccaaagtcattgtcattgatcacatctgcacttgctcaaaactaatctttcaatctaaatcaaatatacaccacact 14783091  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  14783092 aagacgggaaatcaaaa 14783108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6296101 - 6296215
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||| ||| || |||||||| || ||||||| |||||||| | || ||||||||||||||||||  |||||||||||||||||||| |||||||    
T  6296101 ggatctgcaatgtttaccacgccaaaatcattgtcattgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaa 6296200  T
Q  103 gacgggaaatcaaaa 117  Q
    ||||| |||| ||||    
T  6296201 gacggaaaataaaaa 6296215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6302911 - 6303025
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||| ||| || |||||||| || ||||||| |||||||| | || ||||||||||||||||||  |||||||||||||||||||| |||||||    
T  6302911 ggatctgcaatgtttaccacgccaaaatcattgtcattgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaa 6303010  T
Q  103 gacgggaaatcaaaa 117  Q
    ||||| |||| ||||    
T  6303011 gacggaaaataaaaa 6303025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13871476 - 13871586
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| |||      ||| ||| | |||||||||||||  |||||||||||||||||||||||||||| |||||    
T  13871476 ccggatctgcaacgttgacgacgccaaagtcattg------atcagatttgcacttgctcaaagcaaatcttccaacctgaatcaaataaacactgcact 13871569  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  13871570 aagacggaaaataaaaa 13871586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 19402711 - 19402775
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19402711 cacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaa 19402775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 4921739 - 4921847
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||  ||||||| |||      ||||||| | ||||||||||||| ||||||| ||||||| ||||||||||||||||| |||    
T  4921739 ggatctgcaacgttgacgacaacaaagtcattg------atcggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcagtaa 4921832  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  4921833 gacgggaaatcaaaa 4921847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 2488373 - 2488304
Alignment:
Q  36 tcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  2488373 tcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagac 2488304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 29920770 - 29920862
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccg 96  Q
    |||||| |||||||||||||  |||||| ||||||| ||||| ||  |||||| ||||||| ||||||| |||||| ||||||||||||||||    
T  29920770 gatctgtaacgttgacgacgataaagtcattgtcattgatcgaatcaacacttactcaaagctaatctttcaacctaaatcaaataaacaccg 29920862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 1915087 - 1915152
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  1915087 cacttgttcatagctaatctttcaacctgaatcaaataaacaccgtactaagacgggaaagcaaaa 1915152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 12654163 - 12654259
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||| |||||||||||| |||      ||| ||| ||||||||||||||  || |||| |||||| ||||||||||||||| ||||||||    
T  12654163 atctgcaacgttgatgacgccaaagtcattg------atcagatctacacttgctcaaaactagtctttcaacctaaatcaaataaacaccacactaaga 12654256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30813337 - 30813267
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatct 71  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||| | | |||| |||||| ||||||    
T  30813337 ccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagctaatct 30813267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 29284964 - 29284908
Alignment:
Q  61 aaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||| ||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  29284964 aaagctaatctttcaacttgaatcaaataaacaccgcactaagacgagaaataaaaa 29284908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 12156361 - 12156302
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacg 106  Q
    |||| |||||| ||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  12156361 atatgcacttgttcaaacttagtctttcaacctgaatcaaataaataccgcactaagacg 12156302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 7076762 - 7076708
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacg 106  Q
    |||||| |||||||||||||| |||| || | ||||||||||| |||||||||||    
T  7076762 cacttgatcaaagttaatctttcaacttggaacaaataaacactgcactaagacg 7076708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 15176007 - 15175965
Alignment:
Q  75 aacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  15176007 aacctgaatcaaataaacaccgcactaacacgagaaataaaaa 15175965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 15470161 - 15470203
Alignment:
Q  75 aacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  15470161 aacctgaatcaaataaacaccgcactaacacgagaaattaaaa 15470203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 9044014 - 9044055
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaat 88  Q
    ||||||||||| ||||| |||||||| |||||||||||||||    
T  9044014 atatacacttgatcaaaattaatctttcaacctgaatcaaat 9044055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 12652051 - 12652080
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtc 31  Q
    ||||||||||||||||||||||||||||||    
T  12652051 cggatctgcaacgttgacgacgccaaagtc 12652080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 8196415 - 8196451
Alignment:
Q  80 gaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  8196415 gaatcaaatgaacaccgcacaaagacgggaaatcaaa 8196451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 6e-43; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4732341 - 4732225
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  4732341 ccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagataatctttcaacttgaatcaaataaacaccgcact 4732242  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  4732241 aagacgggaaatcaaaa 4732225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 36868276 - 36868163
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||||||||||| ||||||| || ||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36868276 gatctgcaacgttgacgacgccaaagtcattgtcattgaacggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaag 36868177  T
Q  104 acgggaaatcaaaa 117  Q
    ||| ||||||||||    
T  36868176 acgagaaatcaaaa 36868163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9689835 - 9689951
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| | |||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9689835 ccggatctgcaatgctgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 9689934  T
Q  101 aagacgggaaatcaaaa 117  Q
     ||||||||||| ||||    
T  9689935 gagacgggaaataaaaa 9689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13878859 - 13878974
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||  |||    
T  13878859 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccctact 13878958  T
Q  101 aagacgggaaatcaaa 116  Q
    || |||||||||||||    
T  13878959 aaaacgggaaatcaaa 13878974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14018984 - 14019099
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||  |||    
T  14018984 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccctact 14019083  T
Q  101 aagacgggaaatcaaa 116  Q
    || |||||||||||||    
T  14019084 aaaacgggaaatcaaa 14019099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 34962927 - 34963042
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  34962927 cggatctgcaacgttgacgacgccaaagtcattgtcattgataggatctgcacttgctcaaatctaatctttcaacctgaatcaaataaacaccgcacta 34963026  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  34963027 agacgggaaatcaaaa 34963042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 43473981 - 43474094
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| |||||||||||||||||| ||||||| |||| ||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43473981 gatctgcaatgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 43474080  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  43474081 acgggaaatcaaaa 43474094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9978519 - 9978635
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| ||||||||| || ||||||| ||| |||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9978519 ccggatctgcaacgttgatgacgccaaaatcattgtcattgattggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 9978618  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  9978619 aagacgggaaatcaaaa 9978635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10286857 - 10286973
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  10286857 ccggatctgcaacgttgacaacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 10286956  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  10286957 aagacgggaaataaaaa 10286973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20560982 - 20561098
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  20560982 ccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctactcttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 20561081  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| ||||||| ||||    
T  20561082 aagatgggaaataaaaa 20561098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31908667 - 31908782
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  31908667 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaa-ctttcaacctgaatcaaataaacaccgcact 31908765  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||||||||    
T  31908766 aagacaggaaatcaaaa 31908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32314713 - 32314597
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| ||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  32314713 ccggatctgcaacgttgacgacgccaaagttattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 32314614  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  32314613 aagacgggaaataaaaa 32314597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35333776 - 35333660
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  35333776 ccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 35333677  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  35333676 aagacggaaaataaaaa 35333660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 44942556 - 44942451
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  44942556 cggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcacta 44942457  T
Q  102 agacgg 107  Q
    ||||||    
T  44942456 agacgg 44942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4739600 - 4739496
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  4739600 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcact 4739501  T
Q  101 aagac 105  Q
    |||||    
T  4739500 aagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 28230950 - 28231055
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| | ||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  28230950 gatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaag 28231049  T
Q  104 acggga 109  Q
    ||||||    
T  28231050 acggga 28231055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29543064 - 29542947
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaat-aaacaccgcac 99  Q
    |||||||||||||||||| ||||||||| || ||||||| |||||||| | ||||||||||||| |||| || ||||||||||||||| |||||||||||    
T  29543064 ccggatctgcaacgttgatgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaaacaccgcac 29542965  T
Q  100 taagacgggaaatcaaaa 117  Q
    ||||||||||||||||||    
T  29542964 taagacgggaaatcaaaa 29542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 38535158 - 38535271
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |  | ||||||||||||| ||||||| |||||||||||||||||||||||||||| |    
T  38535158 gatctgcaacgttgacgacaccaaagtcattgtcatggatcgaacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactagg 38535257  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  38535258 acgggaaataaaaa 38535271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4426508 - 4426624
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| |  |||||  |||||||  ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  4426508 ccggatctgcaacgttgacgatgataaagttattgtcatttatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 4426607  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  4426608 aagacgggaaatcaaaa 4426624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 12704954 - 12704842
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||| ||||||||||||||||||| |||| || |||| ||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  12704954 atctgcagcgttgacgacgccaaagtcattgtgattgatctgatatgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaaga 12704855  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||| ||||    
T  12704854 cgggaaataaaaa 12704842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28261738 - 28261854
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||  ||||||| |||||||| | | ||||||||||  ||||||| |||||||||||||||||||||||||||    
T  28261738 ccggatctgcaacgttgacgacgcgaaagttattgtcattgatcggatctgctcttgctcaaaactaatctttcaacctgaatcaaataaacaccgcact 28261837  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  28261838 aagacgggaaataaaaa 28261854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33012319 - 33012203
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| ||||||||||||||||||||| || ||||| | |||||||| | |||||| |||||| ||||||| |||||||||| ||||||||||||||||    
T  33012319 ccggatatgcaacgttgacgacgccaaaatcattgtcgttgatcggatttgcacttgatcaaagctaatctttcaacctgaattaaataaacaccgcact 33012220  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  33012219 aagacgggaaatcaaaa 33012203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18089247 - 18089353
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  18089247 ccggatctgcaacgctgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 18089346  T
Q  101 aagacgg 107  Q
    |||||||    
T  18089347 aagacgg 18089353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 41797861 - 41797749
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||| ||||||||| ||||||| || ||||| | ||||||||||||| |||||||   |||||||||||||||||||| |||||    
T  41797861 cggatctgcaacgttgacgatgccaaagtcattgtcattgaacggatctgcacttgctcaaagctaatctt---acctgaatcaaataaacaccacacta 41797765  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  41797764 agacgggaaatcaaaa 41797749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38384307 - 38384423
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| ||||| |||||||||||  ||||||| |||||||| | ||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  38384307 ccggatctgcaatgttgatgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgcact 38384406  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  38384407 aagacggaaaataaaaa 38384423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 43696138 - 43696023
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||||||||||||| |||||||||||| ||||||| |||| ||| | |||||| |||||| |||| || ||||||||||||||||||||||||||||    
T  43696138 cggatctgcaacgttgatgacgccaaagtcattgtcattgatcagatctgcacttgttcaaagctaatttttcaacctgaatcaaataaacaccgcacta 43696039  T
Q  102 agacgggaaatcaaaa 117  Q
    |||| |||||| ||||    
T  43696038 agacaggaaattaaaa 43696023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 22597404 - 22597290
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||| ||||||| | ||||||| || |||| |||||||  | ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  22597404 ggatctgcaacattgacgatgtcaaagtcattatcattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 22597305  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  22597304 gacgggaaataaaaa 22597290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5754553 - 5754443
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| |||      ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  5754553 ccggatctgcaacgttgacgacaccaaagtcattg------atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 5754460  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||||||||    
T  5754459 aagacgagaaatcaaaa 5754443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 12890971 - 12891084
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||| ||||||||||||| ||||||   ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||| |    
T  12890971 gatctacaacgttgacgacaccaaagaaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactagg 12891070  T
Q  104 acgggaaatcaaaa 117  Q
    ||| ||||||||||    
T  12891071 acgagaaatcaaaa 12891084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7072798 - 7072914
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||| ||||||  |||| || | |||||||||||||||||||||||||    
T  7072798 ccggatctgcaacgttgacgacgccaaagtcattgtcattgattggatttgcacttcctcaaaactaatatttcgacctgaatcaaataaacaccgcact 7072897  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| |||||| ||||    
T  7072898 aagacaggaaataaaaa 7072914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 17267977 - 17268092
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| |||| ||  |||||||||||||||| |||| ||| |    
T  17267977 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaattttttaacctgaatcaaataatcaccacacaa 17268076  T
Q  102 agacgggaaatcaaaa 117  Q
    | ||||||||||||||    
T  17268077 aaacgggaaatcaaaa 17268092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 4604159 - 4604273
Alignment:
Q  4 gatctgcaacgttgacgacgccaaa-gtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||||||||||||||||| | |||| ||| ||||||| |||||||| | ||||||||||||| || |||| |||||||||||||||||||||| ||||||    
T  4604159 gatctgcaacgttgacgaagtcaaaagtcattgtcattgatcggatctgcacttgctcaaagctagtctttcaacctgaatcaaataaacaccacactaa 4604258  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  4604259 gacgggaaataaaaa 4604273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 11798383 - 11798489
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||||||||| |||||| |||      ||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  11798383 atctgcaacgttgacgacgcaaaagtcattg------atcggatctacacctgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaaga 11798476  T
Q  105 cgggaaatcaaaa 117  Q
    |||||||||||||    
T  11798477 cgggaaatcaaaa 11798489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 32015521 - 32015408
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||| ||||||||| ||| ||| |||||||| | ||||||||||||  ||||||| |||||||||||||||||||| || ||||||    
T  32015521 gatctgcaacgttgacgatgccaaagtcattgacattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacatcgtactaag 32015422  T
Q  104 acgggaaatcaaaa 117  Q
    |||| |||| ||||    
T  32015421 acggaaaataaaaa 32015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25068121 - 25068007
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| || | |  ||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  25068121 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcgaatctgc-tttgttcaaagctaatctttcaacctgaatcaaataaaca-cgcact 25068024  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  25068023 aagacgggaaataaaaa 25068007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27095977 - 27095861
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| ||||| |||||| ||||||| ||||||||    |||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  27095977 ccggatctgcaacgttgatgacgctaaagtcattgtcattgatcggatcagtacttgctcaaagctaatctttcaacttgaatcaaataaacatcgcact 27095878  T
Q  101 aagacgggaaatcaaaa 117  Q
    | |||||||||| ||||    
T  27095877 acgacgggaaataaaaa 27095861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13740510 - 13740615
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||| |||| |  ||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  13740510 ccggatctgcaacgttgacgacgtcaaagtaattgtcattgattggatctgtacttgttcaaagctaatctttcaacctgaatcaaataaacatcgcact 13740609  T
Q  101 aagacg 106  Q
    ||||||    
T  13740610 aagacg 13740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34416613 - 34416702
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataa 90  Q
    |||||||||||| |||||||||| ||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||    
T  34416613 ccggatctgcaatgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 34416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 11937710 - 11937824
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||| ||||||||||||||||| || ||| ||||||  |||||||| | |||||||||||   ||||||| |||||| ||||||||||||| |||||||    
T  11937710 cggatatgcaacgttgacgacgctaaggtcattgtcactgatcggatctgcacttgctcaatactaatctttcaacct-aatcaaataaacaacgcacta 11937808  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||||||||    
T  11937809 agacgggaaatcaaaa 11937824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17767416 - 17767527
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||  ||||| |||      ||||||| | |||||||||||||||||||||  ||||| |||||||||| ||||| |||    
T  17767416 ccggatctgcaacgttgacgacgcagaagtcattg------atcggatctgcacttgctcaaagttaatcttttaacctaaatcaaataagcaccgtact 17767509  T
Q  101 aagacgggaaatcaaaag 118  Q
    |||| |||||||||||||    
T  17767510 aagatgggaaatcaaaag 17767527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 34471228 - 34471121
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||| ||||||||||| |||      || |||| | ||||||||||||||||||||| |||| ||||||||||||| ||||||||||     
T  34471228 gatctgcaacgttgacaacgccaaagtcattg------attggatctgcacttgctcaaagttaatctttcaacatgaatcaaataaataccgcactaaa 34471135  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  34471134 acgggaaattaaaa 34471121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15920139 - 15920030
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| |||      ||||||| | ||||||| ||||| |||| || |||||||||||||||||||| |||| |    
T  15920139 ccggatctgcaacgttgacgacgccaaagtcattg------atcggatctgcacttgcacaaagctaatatttcaacctgaatcaaataaaca-cgcatt 15920047  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  15920046 aagacgggaaataaaaa 15920030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 6431305 - 6431368
Alignment:
Q  54 cttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||    
T  6431305 cttgctcaaagttaatctttcaacctgaatcaaatcaacaccgcactaagatcggaaatcaaaa 6431368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 26254837 - 26254890
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  26254837 cacttgctcaaagttaatctttcaacctaaatcaaataaacaccgcactaagac 26254890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 20124626 - 20124735
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||| ||||||||||||||||||||| |||      |||| || | ||||||||||||| ||||||| |||||||||| ||||||||||| |||||    
T  20124626 cggatctgaaacgttgacgacgccaaagtcattg------atcgaatttgcacttgctcaaagctaatctttcaacctgaatgaaataaacaccacacta 20124719  T
Q  102 agacgggaaatcaaaa 117  Q
    ||| || |||| ||||    
T  20124720 agatggaaaataaaaa 20124735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 27666423 - 27666365
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  27666423 tcaaaattaatcttttaacctgaatcaaataaacaccgcactaagacgggaaataaaaa 27666365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 823860 - 823924
Alignment:
Q  53 acttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||| |||| || ||| |||||||||||||||||||||||||||||| |||| ||||    
T  823860 acttgctcaaagctaatttttcaatctgaatcaaataaacaccgcactaagacggaaaataaaaa 823924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 11561573 - 11561625
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  11561573 cacttgatcaaagttaatcttc-aacctgaatcaaataatcaccgcactaagac 11561625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 7581944 - 7582053
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||| |||||||||||||| |||||||||||      || | || | ||||||||||||| |||| || ||||||||||||||||||||  ||| ||    
T  7581944 cggatctacaacgttgacgacgtcaaagtcgttg------attgaatttgcacttgctcaaagataatatttcaacctgaatcaaataaacatggcatta 7582037  T
Q  102 agacgggaaatcaaaa 117  Q
    ||| | ||||||||||    
T  7582038 agatgagaaatcaaaa 7582053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 11942636 - 11942592
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggat 48  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  11942636 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggat 11942592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 19904733 - 19904678
Alignment:
Q  47 atatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    |||| |||||| |||||||||||||| | |||||||||||||||||| ||||||||    
T  19904733 atatgcacttgatcaaagttaatctttctacctgaatcaaataaacatcgcactaa 19904678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 8531463 - 8531528
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| | ||||||| ||||  ||| ||||||||||||||||||||||||||  |||||||||||    
T  8531463 cacttgattaaagttattctttaaacatgaatcaaataaacaccgcactaagaaaggaaatcaaaa 8531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 44149951 - 44150007
Alignment:
Q  61 aaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||| || | |||||||||||||||| | ||||||||||| |||||||||||    
T  44149951 aaagttaatatttccacctgaatcaaataaatatcgcactaagacaggaaatcaaaa 44150007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 11581045 - 11581096
Alignment:
Q  66 taatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| |||||||||||||||||| |||||||||| ||| ||||| ||||    
T  11581045 taatctttcaacctgaatcaaataaataccgcactaatacgagaaataaaaa 11581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 20607208 - 20607267
Alignment:
Q  45 ggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||| |||||||| | |||  ||||||| ||||||||||||||||||||||| |||||||    
T  20607208 ggatctacacttgattaaaactaatctttcaacctgaatcaaataaacaccgaactaaga 20607267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 40039231 - 40039274
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||    
T  40039231 caacctgaataaaataaacaccgcactaagacggaaaataaaaa 40039274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 2550367 - 2550325
Alignment:
Q  75 aacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||| |||||||||||||||||| |||||||||    
T  2550367 aacctaaatcaaatgaacaccgcactaagacggaaaatcaaaa 2550325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 8781765 - 8781719
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||| |||||||  ||| |||||||||||||||||||||||||||    
T  8781765 tcaaagctaatcttttaacttgaatcaaataaacaccgcactaagac 8781719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 13548809 - 13548855
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||| ||||||| |||||||||||||||||| |||||| ||||||    
T  13548809 tcaaagctaatctttcaacctgaatcaaataaaaaccgcattaagac 13548855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 45694350 - 45694412
Alignment:
Q  55 ttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||| ||||||| |||| ||| |||||||||||||| ||||||| | ||||| ||||    
T  45694350 ttgctcaaagataatctttcaacatgagtcaaataaacaccgtactaagatgagaaataaaaa 45694412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 84187 - 84224
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  84187 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 84224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 11550445 - 11550474
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtc 31  Q
    ||||||||||||||||||||||||||||||    
T  11550445 cggatctgcaacgttgacgacgccaaagtc 11550474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 27249158 - 27249195
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  27249158 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 27249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 36234082 - 36234045
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36234082 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 36234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 12994119 - 12994175
Alignment:
Q  58 ctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatca 114  Q
    ||||||| ||||||| ||||  ||||||||||||||  ||||||||||| |||||||    
T  12994119 ctcaaagctaatctttcaactagaatcaaataaacattgcactaagacgagaaatca 12994175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7771671 - 7771787
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  7771671 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacttgaatcaaataaacaccgcact 7771770  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| || |||||||||    
T  7771771 aagatggaaaatcaaaa 7771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23428523 - 23428407
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  23428523 ccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttctacctgaatcaaataaacaccgcact 23428424  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||||||||    
T  23428423 aagacgagaaatcaaaa 23428407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6635519 - 6635404
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | || |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  6635519 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacttgaatcaaataaacaccgcact 6635420  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||| ||||||||    
T  6635419 aagacggaaaatcaaa 6635404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 17732237 - 17732352
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  17732237 cggatctgcaaggttgacgacgccaaagtcattgtcattgatcggatttacacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcacta 17732336  T
Q  102 agacgggaaatcaaaa 117  Q
    ||| ||||||| ||||    
T  17732337 agatgggaaataaaaa 17732352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11858179 - 11858065
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||| ||||| |||  || |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11858179 ccggatctgcaacgttgacgacgcctaagtcattg--atcgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 11858082  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  11858081 aagacgggaaataaaaa 11858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6281315 - 6281199
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||  ||| |||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  6281315 ccggatctgcaacaatgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcact 6281216  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  6281215 aagacgggaaatcaaaa 6281199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11734669 - 11734785
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | || |||| ||||| ||||||| ||| |||||||||||||||| ||||||    
T  11734669 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcagttgcgcaaagctaatctttcaatctgaatcaaataaacatcgcact 11734768  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  11734769 aagacgggaaatcaaaa 11734785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23881966 - 23882082
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| |||| ||||||||||||||||| ||||||| |||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  23881966 ccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgtacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcact 23882065  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||| | |||||||||    
T  23882066 aagactgaaaatcaaaa 23882082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33164319 - 33164434
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||| | | |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  33164319 ccggatctgcaacgttgacgacgc-aaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcact 33164417  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  33164418 aagacgggaaatcaaaa 33164434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39179678 - 39179794
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||    
T  39179678 ccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctagtctttcaacctgaatcaaataaacaccgcact 39179777  T
Q  101 aagacgggaaatcaaaa 117  Q
    | || ||||||| ||||    
T  39179778 aggatgggaaataaaaa 39179794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 20483454 - 20483341
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| | |||||| |||||| ||||||| |||| ||| |||||||||||||| ||||||    
T  20483454 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgatcaaagctaatctttcaacttgagtcaaataaacaccgtactaag 20483355  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  20483354 acgggaaatcaaaa 20483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 177954 - 178069
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||||||     
T  177954 ccggatctgcaacgttgacaacgccaaagtcattgtcattgatcagatctacacttgctc-aagctaatctttcaacctgaatcaaataaacaccgcacc 178052  T
Q  101 aagacgggaaatcaaaa 117  Q
    | |||||||||||||||    
T  178053 acgacgggaaatcaaaa 178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 17096094 - 17096206
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||| |||||||||| |||||||| ||||||| |||||||| | || |||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  17096094 gatctgcaccgttgacgacaccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgtactaag 17096193  T
Q  104 acgggaaatcaaa 116  Q
    |||||||||||||    
T  17096194 acgggaaatcaaa 17096206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17331599 - 17331483
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||||||| |||||||| ||||||| | |||||| | | |||| |||||  ||||||| |||||||||||||||||||||||||||    
T  17331599 ccggatctgcaacgttgacgacaccaaagtcattgtcattggtcggatctgctcttgttcaaaactaatctttcaacctgaatcaaataaacaccgcact 17331500  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  17331499 aagacgggaaatcaaaa 17331483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32347564 - 32347680
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||| | ||||||||||||| ||||||| |||| ||||| |||||||||||| |||    
T  32347564 ccggatctgcaatgttgacgacgccaaagttattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacttgaattaaataaacaccgtact 32347663  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||||||||    
T  32347664 aagacgggaaatcaaaa 32347680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43494131 - 43494015
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||| | ||||||| ||||||| ||| |||||| |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  43494131 ccggatctgcaacattgacgatgtcaaagtcattgtcattgattggatatgcacttgctcaaagttagtctttcaacctgaatcaaataaacaccgcact 43494032  T
Q  101 aagacgggaaatcaaaa 117  Q
    || |||| |||||||||    
T  43494031 aaaacggaaaatcaaaa 43494015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 980889 - 980994
Alignment:
Q  11 aacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaa 110  Q
    |||||||||||| |||||||| ||||||| | |||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  980889 aacgttgacgacaccaaagtcattgtcattgctcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaa 980988  T
Q  111 atcaaa 116  Q
     |||||    
T  980989 gtcaaa 980994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 3079187 - 3079300
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||  |||||| ||||  |||||||||||||| |||||||||    
T  3079187 gatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagcaaatctttcaactcgaatcaaataaacatcgcactaag 3079286  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  3079287 acgggaaatgaaaa 3079300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 29098057 - 29097944
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| | | |||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  29098057 gatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgctcttgttcaaagctaatttttcaacctgaatcaaataaacaccgcactaag 29097958  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||| ||||    
T  29097957 acgggaaataaaaa 29097944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3740628 - 3740512
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| || |||||||||||||| ||||||| |||||||| | || |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  3740628 ccggatctgcaacattaacgacgccaaagtcattgtcattgatcggatctgcagttgctcaaagctaatctttcaacctgaattaaataaacaccgcact 3740529  T
Q  101 aagacgggaaatcaaaa 117  Q
     |||||||||| |||||    
T  3740528 cagacgggaaaacaaaa 3740512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26294907 - 26295022
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||| ||||| |||||||| ||||||| |||| ||| | ||||||||||||  |||| || |||||||||||||||||||||||||||    
T  26294907 ccggatctgcaacgttaacgacaccaaagtcattgtcattgatcagatctgcacttgctcaaaactaatatttcaacctgaatcaaataaacaccgcact 26295006  T
Q  101 aagacgggaaatcaaa 116  Q
    ||||||| ||||||||    
T  26295007 aagacggaaaatcaaa 26295022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27241335 - 27241222
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||| |||||| |||||||  ||||||||||||| |||||||  |||    
T  27241335 ccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgatcaaagctaatctttgaacctgaatcaaacaaacaccatact 27241236  T
Q  101 aagacgggaaatca 114  Q
    || |||||||||||    
T  27241235 aaaacgggaaatca 27241222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2555200 - 2555316
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||||||| | ||||| ||||||| |||| || |||||||||||||||||||||| ||||    
T  2555200 ccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctgcactttctcaaagctaatatttcaacctgaatcaaataaacaccacact 2555299  T
Q  101 aagacgggaaatcaaaa 117  Q
    ||||||| |||| ||||    
T  2555300 aagacggaaaataaaaa 2555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12439513 - 12439629
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||| ||||||  ||||||||||||||||| ||||| | |||||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  12439513 ccggaactgcaatcttgacgacgccaaagtcattgtcgttgatcggatcttcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcact 12439612  T
Q  101 aagacgggaaatcaaaa 117  Q
    || |||| |||||||||    
T  12439613 aaaacggaaaatcaaaa 12439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42609415 - 42609299
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||| |||||| |||||||| ||||||| ||||| |||| ||||||||||||| ||||||| |||| ||||||||||||||| |  |||    
T  42609415 ccggatctgcaacgtcgacgacaccaaagtcattgtcattgatcgaatatgcacttgctcaaagctaatctttcaacatgaatcaaataaacatcatact 42609316  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||||||||    
T  42609315 aagacgtgaaatcaaaa 42609299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 34431325 - 34431215
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||| ||||||||||||| ||| ||| ||||||| |||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34431325 gatctgtaacgttgacgacgacaa-gtcattgtcattgatcggatctgcacttgctcaaagttaatct--caacctgaatcaaataaacaccgcactaag 34431229  T
Q  104 acgggaaatcaaaa 117  Q
    || |||||| ||||    
T  34431228 acaggaaataaaaa 34431215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 42396365 - 42396478
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| ||||||| ||| | |||| ||||||||||||| |||| ||  | | ||||||||||||||| ||||||||    
T  42396365 ggatctgcaacgttgacgacgccaaagtcattgtcattgat-gaatatgcacttgctcaaagctaatatttgagcatgaatcaaataaacatcgcactaa 42396463  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||||||||    
T  42396464 gacgggaaatcaaaa 42396478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 18654050 - 18653937
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    ||||||| || ||||||||| ||||||| ||||||| |||||||| | ||||||||||||  |||| || |||||||||||||||||||||||||||| |    
T  18654050 gatctgctacattgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaacctaatttttcaacctgaatcaaataaacaccgcactatg 18653951  T
Q  104 acgggaaatcaaaa 117  Q
    | ||||||||||||    
T  18653950 atgggaaatcaaaa 18653937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17699824 - 17699708
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||| ||||||||||||||||  ||||||| |||| ||| |  |||||||||||| ||||||| |||||||||||||||||||   |||||    
T  17699824 ccggatctgcaacattgacgacgccaaagttattgtcattgatcagatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacgatgcact 17699725  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||||||||| ||||    
T  17699724 aagacgggaaataaaaa 17699708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 28040896 - 28040784
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||| ||||||||||||||||||  |||||| |||||||| | |||||||||| || |||| ||  ||||||||||||||||||||| ||||||||    
T  28040896 atctgcaatgttgacgacgccaaagtcactgtcattgatcggatttgcacttgctcagagctaatatttaaacctgaatcaaataaacaccacactaaga 28040797  T
Q  105 cgggaaatcaaaa 117  Q
      |||||||||||    
T  28040796 taggaaatcaaaa 28040784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 39531264 - 39531376
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||||||||||||| ||  ||| |||||||| | ||||| ||||||| ||||||| ||||| |||||||||||||| || |||||    
T  39531264 ggatctgcaacgttgacgacgccaaagtcatt--cattgatcggatctgcactttctcaaagctaatctttcaacccgaatcaaataaacatcgtactaa 39531361  T
Q  103 gacgggaaatcaaaa 117  Q
    ||  |||||| ||||    
T  39531362 gagtggaaataaaaa 39531376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 17687442 - 17687360
Alignment:
Q  35 gtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||| |||||||||| || ||||||||| |||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||    
T  17687442 gtcattgatcggatatgcatttgctcaaatttaatctttcaatctgaatcaaataaacaccgtactaagatgggaaatcaaaa 17687360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 6681730 - 6681842
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||||||||||||| ||||| || ||||||| |||||||| | | ||| ||||||  ||||||| ||||||| | |||||||||| ||||||||||    
T  6681730 atctgcaacgttgacgacaccaaaatcattgtcattgatcggatttgcgcttactcaaaactaatctttcaacctggaacaaataaacatcgcactaaga 6681829  T
Q  105 cgggaaatcaaaa 117  Q
    || ||||| ||||    
T  6681830 cgagaaataaaaa 6681842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25962184 - 25962074
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||| ||||||||||||||| |||||| |||      ||| ||| | ||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  25962184 ccggatctacaacgttgacgacgcaaaagtcattg------atcagatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacactgcact 25962091  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||| ||||    
T  25962090 aagacgagaaattaaaa 25962074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 12215396 - 12215288
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    ||||||||||||||||||||||| |||||| |||      ||||||||| ||||||||||||  ||||||| |||| | |||||||||||||||||| ||    
T  12215396 cggatctgcaacgttgacgacgcaaaagtcattg------atcggatatgcacttgctcaaaactaatctttcaac-taaatcaaataaacaccgcatta 12215304  T
Q  102 agacgggaaatcaaaa 117  Q
    ||| | ||||||||||    
T  12215303 agatgagaaatcaaaa 12215288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 39915720 - 39915648
Alignment:
Q  45 ggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||| |||||| ||||    
T  39915720 ggatatgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgcactatgacaggaaataaaaa 39915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 32309384 - 32309321
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    ||||||||||||||||||||| |||||||||||||||||| | || |||||||||| |||||||    
T  32309384 cacttgctcaaagttaatcttacaacctgaatcaaataaatatcgtactaagacggaaaatcaa 32309321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 12891896 - 12891831
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| || |||| ||||    
T  12891896 cacttgctcaaagctaatctttcaacctggatcaaataaacaccgcactaagatggaaaattaaaa 12891831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 17523423 - 17523488
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| |||||  ||||||| | ||||||||||||||||||||||| ||||||||||||| ||||    
T  17523423 cacttgatcaaaactaatctttcgacctgaatcaaataaacaccgcaataagacgggaaataaaaa 17523488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 25487828 - 25487763
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| | |||||| ||||| ||||||||||||||||||||  ||||||||||||||||| ||||    
T  25487828 cacttgtttaaagttgatctttcaacctgaatcaaataaacaatgcactaagacgggaaataaaaa 25487763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 374509 - 374449
Alignment:
Q  45 ggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 105  Q
    |||||| |||||| ||||||||| |||| |||| ||||||||| |||||||||||||||||    
T  374509 ggatatgcacttgatcaaagttactctttcaacttgaatcaaacaaacaccgcactaagac 374449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 26240586 - 26240644
Alignment:
Q  59 tcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||||||||| | |||||||||||||||||||| | ||||||||||| |||| ||||    
T  26240586 tcaaagttaatcgttcaacctgaatcaaataaacatcacactaagacggaaaataaaaa 26240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 35275888 - 35275950
Alignment:
Q  53 acttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    |||||||||||| ||| ||| ||||| |||||||||||||| ||||  |||||||||||||||    
T  35275888 acttgctcaaagctaacctttcaaccggaatcaaataaacatcgcataaagacgggaaatcaa 35275950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 35402255 - 35402214
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaaca 93  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  35402255 cacttgttcaaagttaatctttcaacctgaatcaaataaaca 35402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 18573517 - 18573473
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaaaag 118  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||    
T  18573517 caacctgaatcaaataaacaccgcactaaaacgagaaagcaaaag 18573473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 42512883 - 42512949
Alignment:
Q  51 acacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    ||||||| |||||| ||||||  |||||||||||||||||| |||| || ||||||| ||| |||||    
T  42512883 acacttgatcaaagctaatctctcaacctgaatcaaataaataccgtacaaagacggaaaaacaaaa 42512949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 2057845 - 2057882
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  2057845 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 2057882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 27266866 - 27266903
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  27266866 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 27266903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 34881790 - 34881753
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  34881790 tgaatcaaatgaacaccgcacgaagacgggaaatcaaa 34881753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26293881 - 26293853
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaag 29  Q
    |||||||||||||||||||||||||||||    
T  26293881 ccggatctgcaacgttgacgacgccaaag 26293853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 13096 - 13211
Alignment:
Q  2 cggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcacta 101  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  13096 cggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacctcacta 13195  T
Q  102 agacgggaaatcaaaa 117  Q
    ||||||||||| ||||    
T  13196 agacgggaaataaaaa 13211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 1843 - 1729
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaa 102  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||| |  |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  1843 ggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaa 1744  T
Q  103 gacgggaaatcaaaa 117  Q
    |||||||||| ||||    
T  1743 gacgggaaataaaaa 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3171 - 3056
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||||||| | |||||| |||||| ||||||| ||||||||||||||||||||||| |||    
T  3171 ccggatttgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgtact 3072  T
Q  101 aagacgggaaatcaaa 116  Q
    || |||||||||||||    
T  3071 aaaacgggaaatcaaa 3056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 3920 - 4033
Alignment:
Q  4 gatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaag 103  Q
    |||||||||||||||||| ||||||||| || |||| |||| ||| | ||||||||||||| |||| || |||||||||| |||||||||||||||||||    
T  3920 gatctgcaacgttgacgatgccaaagtcattttcattgatcagatctgcacttgctcaaagctaatatttcaacctgaattaaataaacaccgcactaag 4019  T
Q  104 acgggaaatcaaaa 117  Q
    ||||||||||||||    
T  4020 acgggaaatcaaaa 4033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 242 - 130
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    |||||||| ||||||||| |||||||| ||||||| || | ||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  242 atctgcaaagttgacgactccaaagtcattgtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 143  T
Q  105 cgggaaatcaaaa 117  Q
     ||||||||||||    
T  142 tgggaaatcaaaa 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 939 - 1034
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||||| ||| |||||||| |||      |||| || | || || ||||||| ||||||| |||||||||||||||| ||||||||||    
T  939 ccggatctgcaacgttgatgacaccaaagtcattg------atcgaatctgcagtttctcaaagctaatctttcaacctgaatcaaatatacaccgcact 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35355 - 35239
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||||||||||||| ||||||  | |||||| | ||||||||||||| |||| || |||||| ||||||||||||||||||||    
T  35355 ccggatctgcaacgttgacgacgccaaagtcattgtcaatggtcggatttgcacttgctcaaagctaatatttcaacctaaatcaaataaacaccgcact 35256  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||||| ||||| ||||    
T  35255 aagacgagaaataaaaa 35239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 74435 - 74319
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||||||||| ||| |||    
T  74435 ccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaactccgtact 74336  T
Q  101 aagacgggaaatcaaaa 117  Q
    |||| | ||||| ||||    
T  74335 aagatgtgaaattaaaa 74319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 6404 - 6292
Alignment:
Q  5 atctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaaga 104  Q
    ||||||||||||||||||||| ||  | ||||||| ||||| || | ||||||  ||||||||||||| ||||||  ||||||||||||||| |||||||    
T  6404 atctgcaacgttgacgacgcctaacccattgtcattgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaaga 6305  T
Q  105 cgggaaatcaaaa 117  Q
    ||| |||| ||||    
T  6304 cggaaaataaaaa 6292  T

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Target: scaffold0321 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6980 - 7090
Alignment:
Q  1 ccggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcact 100  Q
    |||||||||||||||| |||||||||||||| |||      ||||||| | ||||||||| ||| |||||||  |||| |||| |||||||||| |||||    
T  6980 ccggatctgcaacgttaacgacgccaaagtcattg------atcggatctgcacttgctccaagctaatcttttaacccgaattaaataaacactgcact 7073  T
Q  101 aagacgggaaatcaaaa 117  Q
     ||||||||||||||||    
T  7074 tagacgggaaatcaaaa 7090  T

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Target: scaffold0432 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 2343 - 2384
Alignment:
Q  74 caacctgaatcaaataaacaccgcactaagacgggaaatcaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2343 caacctgaatcaaataaacaccgcactaagacgggaaatcaa 2384  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 201952 - 202017
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaaa 117  Q
    |||||| |||||| |||| || |||||||||||||||||||| |  ||||||||||||||| ||||    
T  201952 cacttgttcaaagctaatatttcaacctgaatcaaataaacatcatactaagacgggaaattaaaa 202017  T

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Target: scaffold0580 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 710 - 742
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaa 111  Q
    |||||||||||||||||||||||||||| ||||    
T  710 tgaatcaaataaacaccgcactaagacgagaaa 742  T

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Target: scaffold0580; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 8449 - 8481
Alignment:
Q  79 tgaatcaaataaacaccgcactaagacgggaaa 111  Q
    |||||||||||||||||||||||||||| ||||    
T  8449 tgaatcaaataaacaccgcactaagacgagaaa 8481  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 4002 - 3938
Alignment:
Q  52 cacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagacgggaaatcaaa 116  Q
    |||||| |||||| |||||||  ||  ||||||||||||||||| || ||||||| |||||||||    
T  4002 cacttgatcaaagataatcttttaatttgaatcaaataaacaccacaataagacgagaaatcaaa 3938  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 136925 - 136957
Alignment:
Q  3 ggatctgcaacgttgacgacgccaaagtcgttg 35  Q
    |||||||||||||||||||| ||||||||||||    
T  136925 ggatctgcaacgttgacgactccaaagtcgttg 136957  T

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