View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12351_low_5 (Length: 309)
Name: NF12351_low_5
Description: NF12351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12351_low_5 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 29577987 - 29577695
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577987 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
29577888 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577887 |
caatgtcatatgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
29577788 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatc |
293 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577787 |
caactcattcacaaagtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatc |
29577695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 29582156 - 29581870
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
|||||||||||||| ||||||| | ||||||| || |||||||||| || ||||||||| |||||||| ||||| || ||||||| ||||||||||| || |
|
|
| T |
29582156 |
ttttcaaagaggtcgatgttgatttgctcaaacttggcccgagtaactggtgagcagaaatcaataccttgacaaatggcatctacgtcaattgtggtct |
29582057 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
29582056 |
caatgtcaaatgaaagtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctctt |
29581957 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
|||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
29581956 |
caactcattcgcaaagtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaa |
29581870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 8537889 - 8538166
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| || |||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| | |
|
|
| T |
8537889 |
ttttcaaagaggtccatgttgagttgctcaaacttggcccgagtgattgatgaacagaaatcaacaccctgacatatagcatctatatcaattgtggctt |
8537988 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|| |||| || ||||| | ||| ||||||||||| || |||||||||| |||||| | |||||||| || ||||||||| || ||||| |||||||| |
|
|
| T |
8537989 |
cagtgtcgtaagaaagcgacctttttgccctctcgcatgcagttctcaacttcctcagagcttttgaatttccactaatgtcaactttgtttttcctctt |
8538088 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctt |
278 |
Q |
| |
|
||| ||||||||||| || ||||||| |||||| |||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
8538089 |
caattcattcacaaaatgattcaccaaccgattatcaaagtcctctcctccaaggtgagtatctccggcagtggcctt |
8538166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 8545486 - 8545772
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||||||||| || | | ||||||| || |||||||| || |||| || ||||||||||| ||| ||| |||||||| |||||||||||||| |
|
|
| T |
8545486 |
ttttcaaagaggtccatattcaattgctcaaacttggcccgagtgatgcatgaacaaaagtcaataccttgatataaagcatctaggtcaattgtggcct |
8545585 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|| |||| || ||||||| ||| |||||| ||||||| |||||||||| | |||| || |||| ||||||| |||||| ||| |||||||||||||||| |
|
|
| T |
8545586 |
cagtgtcgtatgaaagtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctctt |
8545685 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||||| |||||||||| ||||||||| | ||||| ||||| || || ||||||| ||| || |||||||||||||| || ||||| |
|
|
| T |
8545686 |
gaactccttcacaaagtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaa |
8545772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 8570164 - 8570448
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||||| ||| || | | |||||| || ||||| || |||||||| | ||||||||| |||| | |||||||||||| ||||||||||||| |
|
|
| T |
8570164 |
ttttcaaagaggttcatattcatttcctcaaacttggcccgggttattgatgaactgaagtcaattcccttatatatagcatctagctcaattgtggcct |
8570263 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|| | ||||| ||||||| ||| ||||||||||||||||| ||||| | | |||| || |||||||||||| |||||| ||| | ||||||||| |||| |
|
|
| T |
8570264 |
cagtatcatatgaaagtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttctt |
8570363 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttca |
285 |
Q |
| |
|
|||| ||||||||||| ||| |||| | ||||| || || || ||||| |||||||| || |||||||||||||| |||||| |
|
|
| T |
8570364 |
gaacttcttcacaaagtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttca |
8570448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 8609770 - 8610047
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| ||||| ||||| |||||||| || || |||||||||| | |||||||||| || ||||||||||||| |
|
|
| T |
8609770 |
ttttcaaagaggtccatgttaagttgctcaaacttcgcacgagtgattgatgaacaaaaatcaataccctcagatatagcatcaatatcaattgtggcct |
8609869 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
| ||||| | ||||||| |||||||||||||||||||||||| |||| | |||| | ||| | | |||| ||| || || | |||||| || |
|
|
| T |
8609870 |
ccgtgtcaaatgaaagtgtcctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgatatcttttgaatgcttcctttt |
8609969 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctt |
278 |
Q |
| |
|
||||| ||||||||||| || |||||| | | ||| |||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
8609970 |
gaactccttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagcctt |
8610047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 8576179 - 8576462
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||||| ||| || | | |||||| || ||||| || ||||| || |||||||||||||| | | |||||||||||| ||||||||||| | |
|
|
| T |
8576179 |
ttttcaaagaggttcatattcatttcctcaaacttggcccgggttattgaggaacagaagtcaatacctttatatatagcatctagttcaattgtggcat |
8576278 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|| ||||||| ||||||| ||| |||||| | |||||||||||||||| | ||||||| ||||||| ||| |||||| ||| | |||| ||| || | |
|
|
| T |
8576279 |
cagtgtcatatgaaagtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcct |
8576378 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttc |
284 |
Q |
| |
|
||||| || |||||||| | ||||||| | ||||| ||||| | |||||||||||||| || || ||||||||||| ||||| |
|
|
| T |
8576379 |
gaactccttaacaaagtgatccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttc |
8576462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 8383191 - 8382914
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||| |||||||| | ||| || || |||||||||| | | | ||||||||||||||| | ||||| |
|
|
| T |
8383191 |
ttttcaaataggtccatattgagttgctcaaatttggcccgagtgactgaagaattaaaatcaataccctcatacagagcatctatgtcaatcgcggcct |
8383092 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|||| ||| | ||||||| ||| ||||||||||| ||||| ||||| | | | || | ||| ||||||||| |||||||||| ||| | ||||||||| |
|
|
| T |
8383091 |
caatatcaaatgaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctctt |
8382992 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctt |
278 |
Q |
| |
|
||||| | ||||||| ||||| ||| | ||||| ||||| || |||||||| ||||| || || ||||||||||| |
|
|
| T |
8382991 |
gaactcgtcaacaaagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggcctt |
8382914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 8581553 - 8581837
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||||| ||| || | | ||||||| || |||||||| ||||| || ||||||||||||| ||| ||||| ||||| |||||||||||||| |
|
|
| T |
8581553 |
ttttcaaagaggttcatattcatttgctcaaacttggcccgagttattgacgaatagaagtcaataccttgatgtatagaatctaggtcaattgtggcct |
8581652 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
|| ||||||| ||||||| ||| || || |||||||||||||| |||| | | || | |||||||| || | |||| ||| | || | || ||||| |
|
|
| T |
8581653 |
cagtgtcatatgaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctctt |
8581752 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttca |
285 |
Q |
| |
|
||||| ||||||||| ||||||||| | ||||| || || || ||||| |||||||| || |||||||||||||| |||||| |
|
|
| T |
8581753 |
gaactccgacacaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttca |
8581837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 287
Target Start/End: Original strand, 8659330 - 8659502
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| | ||||||| | ||||||||| |||||||||||| || |||||| | || ||||| | |||| |
|
|
| T |
8659330 |
agtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaa |
8659429 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||| |||||||||| | |||| |||||||||||||| |||||||| | |||| |||||| ||||||||||| |
|
|
| T |
8659430 |
agtagttcaccattctgctatcaaagtcctctcctccaaggtgagtgtttccagaagtggcttttacttcaaa |
8659502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 8559181 - 8559472
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||| ||||| || ||| ||||||| || ||||| || |||||||| || |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8559181 |
ttttcaaagagatccatattcagttgctcaaacttagcccgtgtgattgatgaacacaagtcaatgccctgacatatagcatctatgtcaattgtggcct |
8559280 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacatt-----gttcttc |
195 |
Q |
| |
|
| || || |||||| | || |||||||| || |||| | | | || | | || | | |||||||| ||||||||| || || ||||||| |
|
|
| T |
8559281 |
tagtgatgtaagaaagttctctttttgccctttcgcaagaattccgcaaccttctcagggattttgggtcaccactaatgtcaactttaatttgttcttc |
8559380 |
T |
|
| Q |
196 |
ctcttcaactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
|||| ||||| || |||||||| ||||||||| | ||||| |||||||||||||| ||||| || || || | ||||||||| |||||||| |
|
|
| T |
8559381 |
ctctcaaactcttttacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaa |
8559472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 287
Target Start/End: Complemental strand, 10494566 - 10494403
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||| ||| ||| |||||||| || |||||| | || ||||| | ||||| | |||| |
|
|
| T |
10494566 |
tttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattca |
10494467 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||||| | ||||||||||||||||| || |||||||| | ||| |||||||| ||||||||||| |
|
|
| T |
10494466 |
ccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagtggcttttacttcaaa |
10494403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 293
Target Start/End: Complemental strand, 7877974 - 7877756
Alignment:
| Q |
75 |
tatagcatctatgtcaattgtggcctcaatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaa |
174 |
Q |
| |
|
||||||||||||||||||||| | |||| | ||| | || |||| ||| || ||||||||||| |||||||||| | |||| | || | ||||| | |
|
|
| T |
7877974 |
tatagcatctatgtcaattgtagtctcagtatcaaatgacagtgtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttcca |
7877875 |
T |
|
| Q |
175 |
ctaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtgg |
274 |
Q |
| |
|
| ||||||||| || ||||||||||| ||||| |||| || ||||||| |||| | ||||| ||||||||||| |||||||||||||| || ||||| | |
|
|
| T |
7877874 |
ccaatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtag |
7877775 |
T |
|
| Q |
275 |
cctttacttcaaaactatc |
293 |
Q |
| |
|
| |||| ||||| ||||| |
|
|
| T |
7877774 |
ctattacatcaaagctatc |
7877756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 287
Target Start/End: Original strand, 1301427 - 1301599
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| ||| |||||||||||||| ||| |||||| | ||||||| | ||| |||| |||||||||||| || |||||| | | ||||| | |||| |
|
|
| T |
1301427 |
agtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttaccactaatgtccactttattcttctttctgaactcctctacaa |
1301526 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||| | |||||||| ||||||| |||||||||||||| |||||||||| ||| ||||||| ||||||||||| |
|
|
| T |
1301527 |
agtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagtggcttttacttcaaa |
1301599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 293
Target Start/End: Original strand, 8590547 - 8590783
Alignment:
| Q |
57 |
gaagtcaataccctgacatatagcatctatgtcaattgtggcctcaatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttcctt |
156 |
Q |
| |
|
|||||||| |||| | |||||||||||||| | ||||| |||||| | ||||| || |||| ||| || |||||||||||||| ||| ||| | |||| |
|
|
| T |
8590547 |
gaagtcaactccctcatatatagcatctatgccgattgttgcctcagtatcatatgacagtgtccttttagccctctcacaagctgttttcaacctccta |
8590646 |
T |
|
| Q |
157 |
aaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggt |
256 |
Q |
| |
|
| ||| ||| |||| ||| | ||||| || ||||||||| | ||||| ||||| || |||| |||||| | ||||| ||||||||||||||||||| |
|
|
| T |
8590647 |
agagcccttgcgttcccacttaaatccactttattcttcctcctaaactccttcaccaaatggtgaaccattctgttatcaaagtcctctcctcctaggt |
8590746 |
T |
|
| Q |
257 |
gagtatcaccagcagtggcctttacttcaaaactatc |
293 |
Q |
| |
|
| ||||| || | |||||| ||||| ||||| ||||| |
|
|
| T |
8590747 |
gggtatctccggaagtggcttttacatcaaagctatc |
8590783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 8667395 - 8667558
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||||||| ||| |||||||| || |||||| | || ||||| | ||||| | ||||| |
|
|
| T |
8667395 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccactttattcttcttttttaactcctcaacaaaatagttca |
8667494 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||||| | |||||||||||||| || || |||||||| | || |||||||| || |||||||| |
|
|
| T |
8667495 |
ccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagtggctttcacttcaaa |
8667558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 8654426 - 8654589
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | ||||||||| ||||| ||||| || |||||| | || ||||| | ||||||| || || |
|
|
| T |
8654426 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactttattcttctttttgaactcctctacaaagtagtaca |
8654525 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||||| | ||||| ||||| ||||| |||||||| || | ||||||||||| ||||| ||||| |
|
|
| T |
8654526 |
ccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagtggcttttacgtcaaa |
8654589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 283
Target Start/End: Complemental strand, 27831049 - 27830908
Alignment:
| Q |
142 |
gttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagt |
241 |
Q |
| |
|
||||||||| |||| || ||| |||||||| |||||||||||| | |||||| |||| ||| | | |||||| | ||||||||| ||||||| |||| |
|
|
| T |
27831049 |
gttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatcctattatcaaagt |
27830950 |
T |
|
| Q |
242 |
cctctcctcctaggtgagtatcaccagcagtggcctttactt |
283 |
Q |
| |
|
||||||| || |||||||| | |||||||| ||||| |||| |
|
|
| T |
27830949 |
cctctccaccaaggtgagtgtttccagcagttgccttaactt |
27830908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 287
Target Start/End: Complemental strand, 13333644 - 13333485
Alignment:
| Q |
128 |
ccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccat |
227 |
Q |
| |
|
|||||||||| |||||||||| | ||||||| | |||||||||| ||| || || || || |||||| | || ||||| | ||||| | ||||||||| |
|
|
| T |
13333644 |
ccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccat |
13333545 |
T |
|
| Q |
228 |
tttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
| | ||||||||||| ||||| || |||||||| | || || ||||| ||||||||||| |
|
|
| T |
13333544 |
tctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggtggcttttacttcaaa |
13333485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 8602037 - 8602113
Alignment:
| Q |
211 |
acaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| ||||| || || || | ||||||||| |||||||| |
|
|
| T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaa |
8602113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 287
Target Start/End: Complemental strand, 8585910 - 8585735
Alignment:
| Q |
112 |
gaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattca |
211 |
Q |
| |
|
||||||| ||| |||||| | ||||| || ||||| | | ||| |||||| |||||||| | |||| |||||||||||||| ||||| || || | | |
|
|
| T |
8585910 |
gaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgggttcttagtaatatccacattgttctttctcttaaattcctcaa |
8585811 |
T |
|
| Q |
212 |
caaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
|||||| ||||| |||| | ||||| |||||| |||| || |||||||||| ||||| || || || |||||||| |
|
|
| T |
8585810 |
caaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaa |
8585735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 8601832 - 8601921
Alignment:
| Q |
6 |
aaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgt |
95 |
Q |
| |
|
||||||||||| |||||| ||||||| || |||||||| |||||||| ||| |||||||||| | ||| | ||||||||||||||| |
|
|
| T |
8601832 |
aaagaggtccacattgagttgctcaaacttggcccgagtgattgatgaatggaaatcaataccctcaaataaggaatctatgtcaattgt |
8601921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 260
Target Start/End: Original strand, 8646844 - 8646989
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| ||| ||||| ||||| || || ||||||| | ||||||| ||| ||| ||| | |||||||||| ||||||||| | || || || | ||| |
|
|
| T |
8646844 |
agtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaa |
8646943 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagt |
260 |
Q |
| |
|
|||||| ||||||| || |||| |||||||||||||| |||||||| |
|
|
| T |
8646944 |
agtggtccaccattctactatcaaagtcctctcctccgaggtgagt |
8646989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 12528357 - 12528640
Alignment:
| Q |
1 |
ttttcaaagaggtccatgttgagtcgctcaaatttcgcccgagtaattgatgagcagaagtcaataccctgacatatagcatctatgtcaattgtggcct |
100 |
Q |
| |
|
||||||||||||||||| || ||| |||| || || || ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |||| |
|
|
| T |
12528357 |
ttttcaaagaggtccatattcagttgctcgaacttggctcgagtgattgatgagcagaagtcaatgccctcacatatagcatctatgtcaattgtagcct |
12528456 |
T |
|
| Q |
101 |
caatgtcatacgaaagtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctctt |
200 |
Q |
| |
|
| | || || ||||||| ||| || ||| |||| || |||||||| |||||| ||||||| |||| | ||||||| || |||||||||||||| |
|
|
| T |
12528457 |
ctgtatcgtatgaaagtgtccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctctt |
12528556 |
T |
|
| Q |
201 |
caactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttc |
284 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||||| |||||||||||||| |||||||| || || ||||||||||| ||||| |
|
|
| T |
12528557 |
aaactctttcacaaagtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttc |
12528640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 43744810 - 43744928
Alignment:
| Q |
142 |
gttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagt |
241 |
Q |
| |
|
||||||| | ||||||| ||| ||||||| | |||||||||| ||||||||| |||| ||||| | | |||| ||||||||| ||||||| || | |
|
|
| T |
43744810 |
gttctcaacctccttaatgctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaat |
43744909 |
T |
|
| Q |
242 |
cctctcctcctaggtgagt |
260 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
43744910 |
cctctcctccgaggtgagt |
43744928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 287
Target Start/End: Complemental strand, 4678759 - 4678587
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||| | ||||||| | ||||| |||| ||||||||||||||| |||||| | || ||||| | |||| |
|
|
| T |
4678759 |
agtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
4678660 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||| |||||||||| | ||||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
4678659 |
agtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagtggcttttacttcaaa |
4678587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 287
Target Start/End: Complemental strand, 34466994 - 34466822
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| ||||||||| |||| || |||||||||| | |||| |||||| | ||||| |||||| ||| ||| | ||||||||| ||||| || ||| |
|
|
| T |
34466994 |
agtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgcaa |
34466895 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||||| ||| |||||||| | ||||| ||||||||| |||||||| |
|
|
| T |
34466894 |
agtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaa |
34466822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 15595005 - 15595146
Alignment:
| Q |
119 |
ccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtg |
218 |
Q |
| |
|
|||| |||||||| || || |||||||||| |||| || || |||||||| | |||| ||||| ||||||||| |||| || || | | |||||| |
|
|
| T |
15595005 |
ccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagta |
15595104 |
T |
|
| Q |
219 |
gttcaccattttattatcgaagtcctctcctcctaggtgagt |
260 |
Q |
| |
|
||| |||||| | ||||| |||||||||||||| |||||||| |
|
|
| T |
15595105 |
gttgaccattctgttatcaaagtcctctcctccaaggtgagt |
15595146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 283
Target Start/End: Original strand, 7542202 - 7542361
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
||||||||||||||||||||||||| | |||| || |||||||| ||| |||||||||||| |||||||| ||||| ||||| | ||||||| |||| |
|
|
| T |
7542202 |
tttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcg |
7542301 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttactt |
283 |
Q |
| |
|
||||| ||||||| ||||| ||||| || |||||||| | |||||||||||||| |||| |
|
|
| T |
7542302 |
ccattctattatcaaagtcttctccaccaaggtgagtgttgccagcagtggccttaactt |
7542361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 278
Target Start/End: Original strand, 14703384 - 14703538
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||| |||||||| || ||||||||||| |||| || ||||| ||||| | ||||||| ||||| |
|
|
| T |
14703384 |
tttgccctctcgcaagcggttctcaagctccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttca |
14703483 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctt |
278 |
Q |
| |
|
||||| | ||||||||||||||||| || |||||||| | |||||||| ||||| |
|
|
| T |
14703484 |
ccattctgttatcgaagtcctctcccccgaggtgagtgtttccagcagtagcctt |
14703538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 288
Target Start/End: Complemental strand, 16657718 - 16657545
Alignment:
| Q |
115 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
214 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| | |||| || ||| ||| |||| ||| |||||||| || |||||| | | ||||| | |||| |
|
|
| T |
16657718 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaa |
16657619 |
T |
|
| Q |
215 |
agtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaa |
288 |
Q |
| |
|
||| ||||||| || | ||||| ||||||||||| || |||||||| | || |||||||| ||||| |||||| |
|
|
| T |
16657618 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaa |
16657545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 283
Target Start/End: Complemental strand, 12245598 - 12245439
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
||||||||||||||||||||||||| |||| || ||||||| | |||||| |||| |||||||| ||||| ||||| | |||||| ||| | |
|
|
| T |
12245598 |
tttgccctctcacaagcagttctcaatctcctcaaggcttttgaacttgcactaatatccaatttgttctttctcttgaactcctgtgcaaagtagttta |
12245499 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttactt |
283 |
Q |
| |
|
||||| ||||||| || ||||||||||| |||||||| | |||||||||||||| |||| |
|
|
| T |
12245498 |
ccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaactt |
12245439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 17718146 - 17718039
Alignment:
| Q |
121 |
ctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggt |
220 |
Q |
| |
|
||||| ||||||||||||||||| |||| |||| | | |||| ||||||| |||||||||| |||||||| ||||| ||||| | |||||||||| |
|
|
| T |
17718146 |
ctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaacaaagtggt |
17718047 |
T |
|
| Q |
221 |
tcaccatt |
228 |
Q |
| |
|
|||||||| |
|
|
| T |
17718046 |
tcaccatt |
17718039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 16662127 - 16662021
Alignment:
| Q |
181 |
tccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggccttta |
280 |
Q |
| |
|
||||| ||||||||||| || || || |||||||||| ||||| |||| | ||||| ||||||||||| || |||||||| | |||| |||||| || | |
|
|
| T |
16662127 |
tccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaa |
16662028 |
T |
|
| Q |
281 |
cttcaaa |
287 |
Q |
| |
|
||||||| |
|
|
| T |
16662027 |
cttcaaa |
16662021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 43625476 - 43625539
Alignment:
| Q |
212 |
caaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggc |
275 |
Q |
| |
|
|||||| |||||||||| ||| ||| |||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
43625476 |
caaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggc |
43625539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 260
Target Start/End: Original strand, 12234665 - 12234801
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
||||||||||||||||||||||| | | |||| || |||||||| || ||| |||||||| || ||||| || || ||||| | ||| || ||| | |
|
|
| T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta |
12234764 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagt |
260 |
Q |
| |
|
||||| | ||||| ||||||||||| || |||||||| |
|
|
| T |
12234765 |
ccattctgttatcaaagtcctctcccccgaggtgagt |
12234801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 287
Target Start/End: Complemental strand, 9336083 - 9335920
Alignment:
| Q |
124 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggttca |
223 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||||||| | |||||||| || |||||| | || ||||| | |||||| | ||| | |
|
|
| T |
9336083 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttctgcttgatgtccactttattcttcttttttaactcttccacaaaatagttaa |
9335984 |
T |
|
| Q |
224 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaa |
287 |
Q |
| |
|
||||| | ||||| |||||||| ||||| ||||| || | || || ||||| ||||||||||| |
|
|
| T |
9335983 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcaaa |
9335920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 35132474 - 35132583
Alignment:
| Q |
174 |
actaatgtccacattgttcttcctcttcaactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtg |
273 |
Q |
| |
|
||||||||| || |||||||| ||||| ||||| | ||||||| |||||||||| | ||||| ||||||||||| || || ||||| | || |||||| |
|
|
| T |
35132474 |
actaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtg |
35132573 |
T |
|
| Q |
274 |
gcctttactt |
283 |
Q |
| |
|
||||| |||| |
|
|
| T |
35132574 |
gccttaactt |
35132583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 11156324 - 11156382
Alignment:
| Q |
202 |
aactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagt |
260 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||| ||||| | ||| || |||||||| |
|
|
| T |
11156324 |
aactcattcacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagt |
11156382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 11133048 - 11133121
Alignment:
| Q |
202 |
aactcattcacaaagtggttcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggc |
275 |
Q |
| |
|
||||| ||||| || |||||||||||| | ||||| ||||| | ||| || ||||||||||| ||||||||||| |
|
|
| T |
11133048 |
aactctttcacgaaatggttcaccattgtgttatcaaagtcttgtcccccgaggtgagtatctccagcagtggc |
11133121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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