View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12352_low_7 (Length: 255)
Name: NF12352_low_7
Description: NF12352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12352_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 53463104 - 53463272
Alignment:
| Q |
1 |
ctgcggtaactttctgaaattgtcgcattttactgtgtatatgcaaatgaagcggcgtgcggcagaaggatagaagggttattacaaataacttatgttc |
100 |
Q |
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| T |
53463104 |
ctgcggtaactttctgaaattgtcgcattttactgtgtatatgcaaatgaagcggcgtgcggcagaaggatagaagggttattacaaataacttatgttc |
53463203 |
T |
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| Q |
101 |
taattttaggtttattttgttttattgtgaattattagtagctgctaatgtagtgatccaaaaatgttg |
169 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53463204 |
taattttaggtttattttgttttattgtgaattattagtagctgctaatgtagtgatccaaaaatgttg |
53463272 |
T |
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