View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12354_high_13 (Length: 246)
Name: NF12354_high_13
Description: NF12354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12354_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 40099926 - 40099717
Alignment:
| Q |
1 |
tttaaaactatttcttgtgttgaaaattaaatttgttggaggtcttacccataagtgcattcactctcaatgtatggtccaattcgaagggtcacatata |
100 |
Q |
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| T |
40099926 |
tttaaaactatttcttgtgttgaaaattaaatttgttggaggtcttacccataagtgcattcactctcaatatatggtccaattcgaagggtcacatata |
40099827 |
T |
|
| Q |
101 |
aaccttgtgcttgaatttctttaatgaatcccactaaatcaaaccttccactaaactcatactgcataagcaagtcaaaaatcacaaccatgcattttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40099826 |
aaccttgtgcttgaatttctttaatgaatcccactaaatcaaaccttccattaaactcatactgcataagccagtcaaaaatcacaaccatgcattttgt |
40099727 |
T |
|
| Q |
201 |
ttgcaagtat |
210 |
Q |
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|||||||||| |
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| T |
40099726 |
ttgcaagtat |
40099717 |
T |
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