View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12356_high_42 (Length: 205)
Name: NF12356_high_42
Description: NF12356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12356_high_42 |
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Alignment Details
Target: chr6 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 35053325 - 35053153
Alignment:
| Q |
15 |
cagagatagctacatcagtaaattcgtcttcaattattcttgtagcttgtttgctacttggaccctcttgtttgtttccaaaaccaaaagaaatttaaca |
114 |
Q |
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| T |
35053325 |
cagagatagctacatcagtaaattcgtcttcaattattcttgtagcttgtttgctacttggaccctcttgtttgtttccaaaaccaaaagaaatttaaca |
35053226 |
T |
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| Q |
115 |
cgtataatgtgtgcattaattattcaagacccgagctgttaagaaatatggtccgtggaaatatctataggtt |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
35053225 |
cgtataatgtgtgcattaattattcaagacccgagctgttaggaaatatggtccgtggaaatatctataggtt |
35053153 |
T |
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