View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12356_low_20 (Length: 373)
Name: NF12356_low_20
Description: NF12356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12356_low_20 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 326; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 5503421 - 5503762
Alignment:
| Q |
15 |
ctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagag |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5503421 |
ctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagag |
5503520 |
T |
 |
| Q |
115 |
aattctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctat |
214 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5503521 |
aattctttgtcggtgactactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctat |
5503620 |
T |
 |
| Q |
215 |
acagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcca |
314 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5503621 |
acagaacctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctatcttatatgaacactcaccctcagcaggatcttgagggtctttcca |
5503720 |
T |
 |
| Q |
315 |
agatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5503721 |
agatgtgagatatctatatggaccagtaactaagttactttt |
5503762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 356
Target Start/End: Original strand, 5485188 - 5485528
Alignment:
| Q |
16 |
tgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagaga |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5485188 |
tgtgtcctatctgaccattgaaaacgttgtgacattccatatggatctagcaccaatctagtattaattgaactgttcaaagtttcatattgataagaga |
5485287 |
T |
 |
| Q |
116 |
attctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
215 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5485288 |
attctttgtcggtgactactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
5485387 |
T |
 |
| Q |
216 |
cagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttccaa |
315 |
Q |
| |
|
|||| ||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5485388 |
tagaacttttgctccctttgaattaaccagttgaggaaaaccatgtatatctatcttatatgaacactcaccttcagcaggatcttgagggtttttccaa |
5485487 |
T |
 |
| Q |
316 |
gatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5485488 |
gatgtgagatatctatatggaccagtaactaagttactttt |
5485528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 5490608 - 5490949
Alignment:
| Q |
15 |
ctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagag |
114 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5490608 |
ctgtgtcctatctgaccattgtaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagag |
5490707 |
T |
 |
| Q |
115 |
aattctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctat |
214 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5490708 |
aattctttgtcagtgaccactaccgagaaattcaagactctatgcagtcttagccaagaaacaccggtgaaaagaaatccattccatgaccctcctctat |
5490807 |
T |
 |
| Q |
215 |
acagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcca |
314 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
5490808 |
acagaacgtttgctccctttgcagtaactagttgaggaaaaccatgtgtatctatcttatacgaacactcaccttcagcaggatcttgagggtttctcca |
5490907 |
T |
 |
| Q |
315 |
agatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5490908 |
agatgtgagatatctatatggaccagtaactaagttactttt |
5490949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 356
Target Start/End: Complemental strand, 5853848 - 5853508
Alignment:
| Q |
16 |
tgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagaga |
115 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||| |||| ||||||||||| ||| ||||||| ||||||||| ||| | |||||||||||||||||||| |
|
|
| T |
5853848 |
tgtgtcgtatctgaccatagaagacgttgtgaatttccggatggatctagctccattctagtaataattgaacggttcatagtttcatattgataagaga |
5853749 |
T |
 |
| Q |
116 |
attctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
215 |
Q |
| |
|
|||||||||| |||| || ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853748 |
attctttgtcagtgaacattactgagaaattcaagactctgtgcattctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
5853649 |
T |
 |
| Q |
216 |
cagaa-tctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcca |
314 |
Q |
| |
|
|| || ||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
5853648 |
caaaaatcttt-ctcccttttcagtaaccagttgaggaaaaccatgcatatctatcctatatgaacactcaccttcagcaggatcttgagggcttctcca |
5853550 |
T |
 |
| Q |
315 |
agatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5853549 |
agatgtgagatatctatatggaccagtaactaaattactttt |
5853508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 5455431 - 5455772
Alignment:
| Q |
15 |
ctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagag |
114 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| ||||| ||| ||||| |||| ||||||| ||||||||||||| || |||||||||| |||||| |
|
|
| T |
5455431 |
ctgtgtcctatctgtccattgtaaacgttgtgataatccatttgggtctagtaccactctagtaataattgaactgttcaaggtttcatattcgtaagag |
5455530 |
T |
 |
| Q |
115 |
aattctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctat |
214 |
Q |
| |
|
| ||||||||| |||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5455531 |
atttctttgtcagtgaacattactgagaaattcaagactctatgcattctttgccaagaaacaccagtgaaaagaaatccattccatgaccctgctctat |
5455630 |
T |
 |
| Q |
215 |
acagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcca |
314 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||| |
|
|
| T |
5455631 |
acagaattattgccccctttgcagtaagcagttggggaaaaccatgtgtatctatcttatatgaacactcaccttcagcaggatcatcagggtttctcca |
5455730 |
T |
 |
| Q |
315 |
agatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5455731 |
agaagtgagatatctatatggacccgtaactaagttactttt |
5455772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 356
Target Start/End: Original strand, 5446868 - 5447210
Alignment:
| Q |
14 |
cctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataaga |
113 |
Q |
| |
|
|||||||| |||||| |||||| || |||||||| |||||| ||| |||||||| | ||||||| ||||||||||| | |||||||||||||| ||||| |
|
|
| T |
5446868 |
cctgtgtcttatctgtccattgtaagcgttgtgatattccatttgggtctagcacgactctagtaataattgaactgctcaaagtttcatattggtaaga |
5446967 |
T |
 |
| Q |
114 |
gaattctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctcta |
213 |
Q |
| |
|
|| ||||||||| |||| | ||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5446968 |
gatttctttgtcagtgaatattacagagaaattcatgactctatgcactctttgccaagaaacaccagtgaaaagaaatccattccatgaccctgctcta |
5447067 |
T |
 |
| Q |
214 |
tacagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcc |
313 |
Q |
| |
|
||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||| |
|
|
| T |
5447068 |
tacagaaatattgccccgtttgcagtaaccagttgaggaaaaccatgtgtatctatcttatacgaacactcaccttcagcaggatcttgagggcttctcc |
5447167 |
T |
 |
| Q |
314 |
aagatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5447168 |
atgatgtgagatatctatatggaccagtaactaagttactttt |
5447210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 356
Target Start/End: Original strand, 5526262 - 5526602
Alignment:
| Q |
16 |
tgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagaga |
115 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||| | || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5526262 |
tgtgtcctatctgaccattgaagacgttgtgaaattccgtttgaatctagcaccagtctagtattaattgaactgttcaaagtttcatattgataagaga |
5526361 |
T |
 |
| Q |
116 |
attctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
215 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||| || |||||||| | | |||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
5526362 |
cttctttgtcactgaaaactactgagaaattcaagactctagacaaactttgccagggagaaccactgaaaagaaatccattccatggtcctcctctata |
5526461 |
T |
 |
| Q |
216 |
cagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttccaa |
315 |
Q |
| |
|
|||||| ||||||||||| | |||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||| | ||||| |
|
|
| T |
5526462 |
cagaattcttgctccctttactgtaaccagttgaggaaaaccatccatatcgatcctatatgaatactcaccttcagcaggatcttgagggtttctccaa |
5526561 |
T |
 |
| Q |
316 |
gatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5526562 |
gaagtgagatatctatatggaccagtaactaagttactttt |
5526602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 16 - 356
Target Start/End: Complemental strand, 5802150 - 5801804
Alignment:
| Q |
16 |
tgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagaga |
115 |
Q |
| |
|
||||| |||||||||||| |||||||||||||| |||| ||||||||||| | || ||| | | ||||||| |||| | |||| |||| |||||||| |
|
|
| T |
5802150 |
tgtgtgctatctgaccatagaaaacgttgtgaatttccgtatggatctagtatcattcttgcaataattgacttgttcacggtttggtattcataagaga |
5802051 |
T |
 |
| Q |
116 |
attctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaa------gaaacaccagtgaaaagaaatccattccatgaccctcc |
209 |
Q |
| |
|
|||||||||| ||| ||||||| |||||||| |||| || | ||||||| ||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
5802050 |
attctttgtcattgaagactactgtgaaattcatgactttatttgttacttgccaatgccaggaaacactactgaaaagaaatccattccatgaccctcc |
5801951 |
T |
 |
| Q |
210 |
tctatacagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtct |
309 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5801950 |
tctatacagaactgttgctccctttgcagtaacaagttgaggaaaaccaggcatatctatcctatatgaacactcaccttcagcaggatcttgagggctt |
5801851 |
T |
 |
| Q |
310 |
ttccaagatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5801850 |
ctccaagatgtgagatatctatatggaccagtaactaagttactttt |
5801804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 24 - 354
Target Start/End: Complemental strand, 5827810 - 5827480
Alignment:
| Q |
24 |
atctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagagaattctttg |
123 |
Q |
| |
|
|||||||||| |||||| | || | ||||||||||||||||||| ||||||||| | ||||||||||| || ||| |||||||||||| | |||||| |
|
|
| T |
5827810 |
atctgaccatataaaacggtttggaattccatatggatctagcacaaatctagtaatcattgaactgttaaacgttgcatattgataagtaacttcttta |
5827711 |
T |
 |
| Q |
124 |
tcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctatacagaatct |
223 |
Q |
| |
|
|| || | || | |||| |||||||||||||| | | | ||||||||||||| ||| ||||| || |||||||||||||||| |||||||||||||| |
|
|
| T |
5827710 |
tcagttaacatgaatgagtaattcaagactctatgaactatttgccaagaaactccattgaaatgatatccattccatgacccacctctatacagaattg |
5827611 |
T |
 |
| Q |
224 |
ttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttccaagatgtgag |
323 |
Q |
| |
|
|| |||||||||| ||||| |||||||||||||||| |||||||| |||| ||| ||||||| ||||||||||||| || | | ||||||| || || |
|
|
| T |
5827610 |
tttttccctttgcaataacctgttgaggaaaaccatgagtatctatcctatacgaaaactcaccgtcagcaggatcttcagaggatctccaagaagtcag |
5827511 |
T |
 |
| Q |
324 |
atatctatatggaccagtaactaagttactt |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
5827510 |
atatctatatggaccagtaactaagttactt |
5827480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 356
Target Start/End: Complemental strand, 5848535 - 5848207
Alignment:
| Q |
28 |
gaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagagaattctttgtcgg |
127 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| | ||||||| ||||| ||||||||||||||||||||||| ||| || ||||||||| | |
|
|
| T |
5848535 |
gaccattgaagacgttgtgaagttccatatggatttagcacaactctagtaataattaaactgtttaaagtttcatattgaaaagtgacttctttgtcag |
5848436 |
T |
 |
| Q |
128 |
tgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctatacagaatctttgc |
227 |
Q |
| |
|
| | ||| | |||| ||||||| | || ||||||||||| | | |||||||||||| |||||||||| |||||||||||| | | | | | | |
|
|
| T |
5848435 |
ttaacacaaatgagtaattcaatatattataatttctttgccaagtagctccagtgaaaagatatccattccacgaccctcctctaaatatagttgtcgt |
5848336 |
T |
 |
| Q |
228 |
tccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttccaagatgtgagatat |
327 |
Q |
| |
|
|||||||||| | ||||||||||||| || |||||||| | |||| |||| || ||||||||||||| || | | ||||||| ||||||||| |
|
|
| T |
5848335 |
tccctttgcaatttggtgttgaggaaaaccgtgagtatctatcctcactgaaaactcgccgtcagcaggatcttcagaggatctccaagaagtgagatat |
5848236 |
T |
 |
| Q |
328 |
ctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5848235 |
ctatatggaccagtaactaagttactttt |
5848207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 356
Target Start/End: Original strand, 20344052 - 20344380
Alignment:
| Q |
16 |
tgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataagaga |
115 |
Q |
| |
|
||||||| ||| |||||| ||||||||||| ||||||||||| ||||||||| ||||||||| |||| || || | | |||| ||||||||| | || |
|
|
| T |
20344052 |
tgtgtccaatccgaccatataaaacgttgtggagttccatatgtatctagcacaaatctagtaataatgaaattggtccacgtttgatattgatatgtga |
20344151 |
T |
 |
| Q |
116 |
attctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctctata |
215 |
Q |
| |
|
||||||||| || | ||| | |||| |||||||||| ||| | |||||||||| ||| | | ||||||||||||||||||||||||| |
|
|
| T |
20344152 |
cttctttgtcagtaatcacaaatgagtaattcaagaccctattaattctttgccaa--aactc----------atatccattccatgaccctcctctata |
20344239 |
T |
 |
| Q |
216 |
cagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttccaa |
315 |
Q |
| |
|
|| ||| ||| |||||||||| |||| |||||||||||||||| ||||| || |||| ||| |||||||| |||||||||||| || | | ||||| |
|
|
| T |
20344240 |
cataattgttgttccctttgcaataacttgttgaggaaaaccatgagtatcgatcctatacgaaaactcacctacagcaggatcttcagaggttctccaa |
20344339 |
T |
 |
| Q |
316 |
gatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
20344340 |
gaagtgagatatctatatggaccagtcactaagttactttt |
20344380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 356
Target Start/End: Complemental strand, 25808944 - 25808602
Alignment:
| Q |
14 |
cctgtgtcctatctgaccattgaaaacgttgtgaagttccatatggatctagcaccaatctagtattaattgaactgtttaaagtttcatattgataaga |
113 |
Q |
| |
|
|||||||| |||||| |||||| || |||||||| |||||| ||| |||||||| | ||||||| ||||||||||| | |||||||||||||| ||||| |
|
|
| T |
25808944 |
cctgtgtcttatctgtccattgtaagcgttgtgatattccatttgggtctagcacgactctagtaataattgaactgctcaaagtttcatattggtaaga |
25808845 |
T |
 |
| Q |
114 |
gaattctttgtcggtgaccactactgagaaattcaagactctacgcagtctttgccaagaaacaccagtgaaaagaaatccattccatgaccctcctcta |
213 |
Q |
| |
|
|| ||||||||| |||| | ||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25808844 |
gatttctttgtcagtgaatattacagagaaattcatgactctatgcactctttgccaagaaacaccagtgaaaagaaatccattccatgaccctgctcta |
25808745 |
T |
 |
| Q |
214 |
tacagaatctttgctccctttgcagtaaccagttgaggaaaaccatgtgtatctattttatatgaacactcaccttcagcaggatcttgagggtctttcc |
313 |
Q |
| |
|
||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||| |
|
|
| T |
25808744 |
tacagaaatattgccccgtttgcagtaaccagttgaggaaaaccatgtgtatctatcttatacgaacactcaccttcagcaggatcttgagggcttctcc |
25808645 |
T |
 |
| Q |
314 |
aagatgtgagatatctatatggaccagtaactaagttactttt |
356 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25808644 |
atgatgtgagatatctatatggaccagtaactaagttactttt |
25808602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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