View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12356_low_23 (Length: 341)

Name: NF12356_low_23
Description: NF12356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12356_low_23
NF12356_low_23
[»] chr7 (20 HSPs)
chr7 (7-267)||(22088242-22088502)
chr7 (7-324)||(22063291-22063608)
chr7 (7-328)||(22069760-22070081)
chr7 (139-328)||(22080649-22080838)
chr7 (263-324)||(22100398-22100459)
chr7 (186-330)||(6864904-6865048)
chr7 (197-328)||(20374603-20374734)
chr7 (182-286)||(20126330-20126434)
chr7 (197-328)||(20361302-20361433)
chr7 (187-241)||(16839568-16839622)
chr7 (7-94)||(661016-661103)
chr7 (182-313)||(20338748-20338879)
chr7 (187-241)||(16846651-16846705)
chr7 (182-241)||(18326045-18326104)
chr7 (7-94)||(22080505-22080592)
chr7 (204-245)||(14076541-14076582)
chr7 (204-245)||(14386569-14386610)
chr7 (192-245)||(29881090-29881143)
chr7 (181-245)||(9807647-9807711)
chr7 (205-245)||(29454286-29454326)
[»] chr1 (2 HSPs)
chr1 (197-328)||(15961067-15961198)
chr1 (35-96)||(15960908-15960969)
[»] scaffold0867 (1 HSPs)
scaffold0867 (263-324)||(4773-4834)
[»] chr8 (1 HSPs)
chr8 (198-289)||(27618331-27618422)
[»] chr4 (2 HSPs)
chr4 (181-274)||(11971136-11971229)
chr4 (133-245)||(11981866-11981981)
[»] chr3 (1 HSPs)
chr3 (199-245)||(3625575-3625621)


Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 22088242 - 22088502
Alignment:
Q  7 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattcccctatgactcatca 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22088242 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttagtttgggcgttaatgtttggagaaatatccaagattcccctatgactcatca 22088341  T
Q  107 tcttcgccggtggaaggttgtgtatgtgagaggtagtgttaattggttggcaattcacaattacattggtgatgattataattgcaagggtattactatt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22088342 tcttcgccggtggaaggttgtgtatgtgagaggtagtgttaattggttggcaattcacaattacattggtgatgattataattgcaagggtattactatt 22088441  T
Q  207 gagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22088442 gagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctc 22088502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 324
Target Start/End: Original strand, 22063291 - 22063608
Alignment:
Q  7 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattcccctatgactcatca 106  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  22063291 ataaggtggtgtatttcactcgaaagacaacaaatgtaagagtttttagtttgggcgttaatgtttggagaaatatccaagattcccctatgattcatca 22063390  T
Q  107 tcttcgccggtggaaggttgtgtatgtgagaggtagtgttaattggttggcaattcacaattacattggtgatgattataattgcaagggtattactatt 206  Q
    || | | | |  |||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  22063391 tcattggcagatgaaggttgtgcatgtgaaagatagtgttaattggttggcaattcacaattacattagtgatgattataattgcgagggtattactatt 22063490  T
Q  207 gagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgttatacctaatc 306  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||| |||||| ||| |||||||||| || |    
T  22063491 gggcaatttgtgattatttcacttgatttgggcactgaggcatatactaaattgtttcctcctcatggtttcagtgaagtaccatttgttataccaaaac 22063590  T
Q  307 taagtgtcctaaatgatt 324  Q
    |||||||| |||||||||    
T  22063591 taagtgtcttaaatgatt 22063608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 328
Target Start/End: Original strand, 22069760 - 22070081
Alignment:
Q  7 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattcccctatgactcatca 106  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  22069760 ataaggtggtgtatttcactcgaaagacaacaaatgtaagagtttttagtttgggcgttaatgtttggagaaatatccaagattcccatatgattcatca 22069859  T
Q  107 tcttcgccggtggaaggttgtgtatgtgagaggtagtgttaattggttggcaattcacaattacattggtgatgattataattgcaagggtattactatt 206  Q
    || ||||| |  ||||||| || |||||||||||||||||||||||||||||||||||||||||||  || |  ||||||||| ||||| ||||||||||    
T  22069860 tcatcgccagatgaaggttatgcatgtgagaggtagtgttaattggttggcaattcacaattacatcagttactattataatttcaaggatattactatt 22069959  T
Q  207 gagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgttatacctaatc 306  Q
    ||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||    
T  22069960 gaggaatttgtgattatttcacttgatttgggtaccgagacacatactaagttgttgcctcctcacggtttcgatgaagtgccatttgttataccaaatc 22070059  T
Q  307 taagtgtcctaaatgattgtct 328  Q
    |||||||  |||| ||||||||    
T  22070060 taagtgttttaaaggattgtct 22070081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 328
Target Start/End: Original strand, 22080649 - 22080838
Alignment:
Q  139 gtagtgttaattggttggcaattcacaattacattggtgatgattataattgcaagggtattactattgagcaatttgtgattatttcacttgatttggg 238  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||| |||  ||||||| |||||| ||||||||||||||||||||||    
T  22080649 gtagtgttaattggttggcaattcacaattatatccgtgatgattattattgcaaggatatcgctattgaacaatttatgattatttcacttgatttggg 22080748  T
Q  239 cactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgttatacctaatctaagtgtcctaaatgattgtct 328  Q
    ||| ||| ||||| |||||||   |||||||||  |||||  |||||| ||  |||||||||| ||||||||| |  |||| ||||||||    
T  22080749 caccgagacacatgctaagtttcggcctcctcacagtttcgttgaagttccctttgttataccaaatctaagtatgttaaaggattgtct 22080838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 22100398 - 22100459
Alignment:
Q  263 gcctcctcaaggtttcaatgaagtgccaattgttatacctaatctaagtgtcctaaatgatt 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22100398 gcctcctcatggtttcaatgaagtgccaattgttatacctaatctaagtgtcttaaatgatt 22100459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 330
Target Start/End: Complemental strand, 6865048 - 6864904
Alignment:
Q  186 aattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaag 285  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||| |||||| |||| ||  |||||||   ||||  |||||||| ||||||| |||||    
T  6865048 aattgaaaggatattactattgagcaatttgagattatttcacttcatttggacactaagatacatactcgtttgtctcctcctcagggtttcattgaag 6864949  T
Q  286 tgccaattgttatacctaatctaagtgtcctaaatgattgtctct 330  Q
    |||||||||||   || |||||||| ||  |||| ||||||||||    
T  6864948 tgccaattgttgccccaaatctaagcgtgttaaaggattgtctct 6864904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 328
Target Start/End: Complemental strand, 20374734 - 20374603
Alignment:
Q  197 tattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgtt 296  Q
    |||||||||| |||||||| | |||||||| ||||||||||| |||||  ||||| || || | |||||||||||||| ||||  |||||||| ||||||    
T  20374734 tattactattcagcaatttatcattatttctcttgatttgggtactgaaacacattctcagcttttgcctcctcaaggcttcatggaagtgccgattgtt 20374635  T
Q  297 atacctaatctaagtgtcctaaatgattgtct 328  Q
      |||  |||||||||| ||||| ||||||||    
T  20374634 gcaccatatctaagtgtgctaaaggattgtct 20374603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 20126434 - 20126330
Alignment:
Q  182 ttataattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaat 281  Q
    |||| ||||||||  ||| |||||| ||||||||||||||||||| ||||| |||||||||||| ||||| || || |  |||| ||||||||||||| |    
T  20126434 ttatgattgcaagaatatcactattcagcaatttgtgattatttcccttgacttgggcactgagacacattctcagcttctgccacctcaaggtttcact 20126335  T
Q  282 gaagt 286  Q
    |||||    
T  20126334 gaagt 20126330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 328
Target Start/End: Complemental strand, 20361433 - 20361302
Alignment:
Q  197 tattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgtt 296  Q
    |||||||||| | ||||||||||| ||||| |||||||||||||| ||  | | | || |  | ||||| |||||||||||||  |||||||||||||||    
T  20361433 tattactattcatcaatttgtgatcatttctcttgatttgggcaccgaaacgctttctcaacttttgccacctcaaggtttcacggaagtgccaattgtt 20361334  T
Q  297 atacctaatctaagtgtcctaaatgattgtct 328  Q
     ||||  |||||||||| ||||| ||||||||    
T  20361333 gtaccatatctaagtgtgctaaaggattgtct 20361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 16839622 - 16839568
Alignment:
Q  187 attgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcac 241  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  16839622 attgcaaggatcttactgttgagcaatttgtgattatttcacttgatttgggcac 16839568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 661103 - 661016
Alignment:
Q  7 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattcccc 94  Q
    ||||||||||||| |||  ||| ||||||||||| |||||| |||| ||||| || | |||||||||||||||||| ||| |||||||    
T  661103 ataaggtggtgtacttccttccggagacaacaaacgtaagaattttcaatttaggcgataatgtttggagaaatattcaaaattcccc 661016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 20338748 - 20338879
Alignment:
Q  182 ttataattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaat 281  Q
    |||||||||| ||  ||||||| || |||||||||||||||| ||  |||| ||| |||||||| ||||| || || |  |||| ||||||||||||| |    
T  20338748 ttataattgcgagaatattactgttcagcaatttgtgattatatctattgacttgagcactgagacacattctcagattctgccacctcaaggtttcact 20338847  T
Q  282 gaagtgccaattgttatacctaatctaagtgt 313  Q
    |||| ||| |||||| |||| ||| |||||||    
T  20338848 gaagcgccgattgttgtaccaaatttaagtgt 20338879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 16846705 - 16846651
Alignment:
Q  187 attgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcac 241  Q
    ||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||    
T  16846705 attgcaaggatcttactgttgagcaatttgtgattatttctcttgatttgggcac 16846651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 18326045 - 18326104
Alignment:
Q  182 ttataattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcac 241  Q
    |||| ||||||||  ||||| | |||||||||||| ||||||||||||||||||||||||    
T  18326045 ttatgattgcaagaatattattgttgagcaatttgcgattatttcacttgatttgggcac 18326104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 22080505 - 22080592
Alignment:
Q  7 ataaggtggtgtatttcactccagagacaacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattcccc 94  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||| | ||| ||    |||||||||||| |||| ||| |||||||    
T  22080505 ataaggtggtgtatttcactccaaaaacaacaaacgtaagagttttcagtttaggcaacaatgtttggagagatattcaaaattcccc 22080592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 14076541 - 14076582
Alignment:
Q  204 attgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  14076541 attgagcaatttgtgattatctcacttgatttggggactgag 14076582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 14386569 - 14386610
Alignment:
Q  204 attgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  14386569 attgagcaatttgtgattatctcacttgatttggggactgag 14386610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 29881090 - 29881143
Alignment:
Q  192 aagggtattactattgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    |||| ||||||| |||| |||||||| ||| |||||||||||||||| ||||||    
T  29881090 aaggatattactgttgaccaatttgttattgtttcacttgatttggggactgag 29881143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 9807647 - 9807711
Alignment:
Q  181 attataattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    ||||| || ||||| || ||||| |||  |||||||||||| |||||||||||||||| ||||||    
T  9807647 attatgatagcaagtgttttactcttggtcaatttgtgattctttcacttgatttgggtactgag 9807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 29454326 - 29454286
Alignment:
Q  205 ttgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    ||||||| ||||| |||||||||||||||||||| ||||||    
T  29454326 ttgagcagtttgttattatttcacttgatttggggactgag 29454286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 328
Target Start/End: Original strand, 15961067 - 15961198
Alignment:
Q  197 tattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgccaattgtt 296  Q
    |||| ||||||| || ||||||||| ||||||||||||||||||||||| |||||||| |||||   |||||| |||||||||||||||| |||  ||||    
T  15961067 tatttctattgaacattttgtgattgtttcacttgatttgggcactgagacacatactcagttggcacctcctaaaggtttcaatgaagttccatatgtt 15961166  T
Q  297 atacctaatctaagtgtcctaaatgattgtct 328  Q
    | ||| |||||||||||  ||||| |||||||    
T  15961167 aaaccaaatctaagtgtgttaaataattgtct 15961198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 15960908 - 15960969
Alignment:
Q  35 aacaaatgtaagagtttttaatttgggtgttaatgtttggagaaatatccaagattccccta 96  Q
    |||||| ||||||||||||| |||| | |  |||||||||||||| || |||||||||||||    
T  15960908 aacaaaggtaagagtttttagtttgagagagaatgtttggagaaacattcaagattccccta 15960969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 4834 - 4773
Alignment:
Q  263 gcctcctcaaggtttcaatgaagtgccaattgttatacctaatctaagtgtcctaaatgatt 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4834 gcctcctcatggtttcaatgaagtgccaattgttatacctaatctaagtgtcttaaatgatt 4773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 27618331 - 27618422
Alignment:
Q  198 attactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaaggtttcaatgaagtgcc 289  Q
    ||||||||||| ||||||||||||||||| ||||||||| | |||||| |||| ||  ||||| | |||||||  |||||||||||||||||    
T  27618331 attactattgatcaatttgtgattatttcgcttgatttgagtactgagacacacacacagttgcttcctcctcggggtttcaatgaagtgcc 27618422  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 11971229 - 11971136
Alignment:
Q  181 attataattgcaagggtattactattgagcaatttgtgattatttcacttgatttgggcactgaggcacatactaagttgttgcctcctcaagg 274  Q
    ||||| ||||||| | |||||| ||  |||||||||||||||||||||||||||| |||||||||  | ||||| |||||   |||||||||||    
T  11971229 attatgattgcaaagatattacaatcaagcaatttgtgattatttcacttgattttggcactgagaaatatactcagttgcgacctcctcaagg 11971136  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 11981981 - 11981866
Alignment:
Q  133 tgagaggtagtgttaattggttggcaattcacaattacattggt---gatgattataattgcaagggtattactattgagcaatttgtgattatttcact 229  Q
    |||| |||||||||  ||||||| ||||||| ||||||| ||||   ||||||||| ||||| ||| | |||| || |||||||||||| |||| || ||    
T  11981981 tgagtggtagtgttttttggttgacaattcagaattacaatggttatgatgattatgattgcgaggattttacaatcgagcaatttgtggttatgtcgct 11981882  T
Q  230 tgatttgggcactgag 245  Q
    ||| ||||||| ||||    
T  11981881 tgacttgggcattgag 11981866  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 3625575 - 3625621
Alignment:
Q  199 ttactattgagcaatttgtgattatttcacttgatttgggcactgag 245  Q
    ||||| ||||||||||||| ||| |||||||||||||||| ||||||    
T  3625575 ttactgttgagcaatttgttattgtttcacttgatttggggactgag 3625621  T

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