View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12356_low_28 (Length: 310)
Name: NF12356_low_28
Description: NF12356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12356_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 46572975 - 46573274
Alignment:
| Q |
1 |
ctgttgatgttccaaaggtatctaccatctaaacgacgagattgtaagtagttctgtatcagcattaggtggtagttattggattgatgaaattttcttt |
100 |
Q |
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| T |
46572975 |
ctgttgatgttccaaaggtatctaccatctaaacgacgagattgtaagtagttctgtatcagtattaggtggtagttattggattgatgaaattttcttt |
46573074 |
T |
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| Q |
101 |
ctgggattttgtgtatgttactgtttttagagttcaggttttaggaattttattctgctttctggtgtacaagtggtgggtctagtttaggggaagtttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46573075 |
ctgggattttgtgtatgttactgtttttagagttcaggttttaggaattttattctgctttctggtgtacaagtggtgggtctagtttaggggaagtttt |
46573174 |
T |
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| Q |
201 |
tgttgaatttaactttgtcatgtgctggtggttgcttgaacttgtgattgttttgctgtgagtgtattttctcgggaatgtatttattgactgatctgtg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46573175 |
tgttgaatttaactttgtcatgtgctggtggttgcttgaacttgtgattgttttgctgtgagtgtattttctcgggaatgtatttattgactgatctgtg |
46573274 |
T |
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