View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12357_low_1 (Length: 781)

Name: NF12357_low_1
Description: NF12357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12357_low_1
NF12357_low_1
[»] chr1 (33 HSPs)
chr1 (16-521)||(25493662-25494154)
chr1 (602-766)||(25493333-25493497)
chr1 (25-139)||(31794226-31794340)
chr1 (25-139)||(50901581-50901695)
chr1 (49-139)||(24047064-24047154)
chr1 (27-139)||(33700735-33700847)
chr1 (24-139)||(6122793-6122908)
chr1 (36-139)||(17410242-17410345)
chr1 (24-139)||(21547442-21547557)
chr1 (23-117)||(8177166-8177260)
chr1 (45-139)||(12587290-12587383)
chr1 (49-139)||(27476733-27476823)
chr1 (25-139)||(52116743-52116857)
chr1 (25-105)||(19528323-19528403)
chr1 (24-139)||(40257398-40257513)
chr1 (29-123)||(17745234-17745328)
chr1 (67-139)||(1094567-1094639)
chr1 (23-123)||(6650593-6650693)
chr1 (72-139)||(3799953-3800020)
chr1 (24-103)||(4566547-4566626)
chr1 (44-139)||(10526842-10526937)
chr1 (36-139)||(52336736-52336839)
chr1 (151-181)||(11768923-11768953)
chr1 (25-139)||(16893394-16893508)
chr1 (542-596)||(30735574-30735628)
chr1 (49-139)||(36124857-36124947)
chr1 (23-89)||(36371468-36371534)
chr1 (49-139)||(44961789-44961879)
chr1 (51-128)||(8077666-8077742)
chr1 (24-117)||(8904413-8904506)
chr1 (25-82)||(9165214-9165271)
chr1 (102-139)||(10334052-10334089)
chr1 (51-132)||(31605817-31605898)
[»] chr8 (26 HSPs)
chr8 (24-139)||(16852339-16852454)
chr8 (25-139)||(23874345-23874458)
chr8 (24-136)||(19703452-19703564)
chr8 (25-139)||(968362-968476)
chr8 (25-132)||(23361618-23361725)
chr8 (43-139)||(6536538-6536634)
chr8 (36-132)||(43594287-43594383)
chr8 (23-139)||(44780076-44780192)
chr8 (25-139)||(11819776-11819890)
chr8 (25-139)||(18540298-18540412)
chr8 (25-139)||(26688865-26688979)
chr8 (36-130)||(35690035-35690129)
chr8 (27-132)||(2203494-2203599)
chr8 (23-139)||(28783058-28783174)
chr8 (26-132)||(29858018-29858124)
chr8 (49-138)||(3305151-3305240)
chr8 (24-97)||(5801046-5801119)
chr8 (25-81)||(6569791-6569847)
chr8 (23-139)||(8484997-8485113)
chr8 (24-124)||(18897165-18897265)
chr8 (152-191)||(12957551-12957590)
chr8 (24-90)||(5264543-5264609)
chr8 (49-139)||(10287499-10287589)
chr8 (49-139)||(11492035-11492125)
chr8 (45-139)||(31087220-31087314)
chr8 (153-186)||(13581847-13581880)
[»] chr5 (17 HSPs)
chr5 (25-139)||(29075781-29075895)
chr5 (25-139)||(16773807-16773921)
chr5 (25-139)||(17028226-17028340)
chr5 (25-139)||(21589288-21589402)
chr5 (24-128)||(30883171-30883275)
chr5 (44-139)||(28285271-28285366)
chr5 (52-139)||(84851-84938)
chr5 (23-117)||(26078035-26078129)
chr5 (545-587)||(43550705-43550747)
chr5 (25-117)||(21549121-21549213)
chr5 (24-132)||(22020831-22020939)
chr5 (28-139)||(12877696-12877807)
chr5 (64-139)||(29173529-29173604)
chr5 (24-139)||(30109271-30109385)
chr5 (93-139)||(4793042-4793088)
chr5 (46-139)||(30000137-30000230)
chr5 (51-128)||(33709603-33709679)
[»] chr2 (26 HSPs)
chr2 (25-139)||(1435064-1435177)
chr2 (28-139)||(33962746-33962857)
chr2 (25-132)||(23052492-23052599)
chr2 (22-132)||(39714989-39715099)
chr2 (24-139)||(29503270-29503384)
chr2 (24-139)||(37480074-37480189)
chr2 (25-132)||(42327364-42327471)
chr2 (27-139)||(12086091-12086203)
chr2 (56-139)||(25637182-25637265)
chr2 (24-139)||(42602553-42602668)
chr2 (541-586)||(96173-96218)
chr2 (25-90)||(11062360-11062425)
chr2 (23-136)||(11251085-11251198)
chr2 (24-132)||(3001378-3001486)
chr2 (51-139)||(12517716-12517803)
chr2 (24-136)||(29197341-29197453)
chr2 (25-97)||(42860348-42860420)
chr2 (24-139)||(7798998-7799112)
chr2 (24-139)||(21195638-21195753)
chr2 (151-182)||(21503420-21503451)
chr2 (51-138)||(30359680-30359766)
chr2 (49-103)||(3677351-3677405)
chr2 (49-139)||(19016055-19016145)
chr2 (49-127)||(21213793-21213871)
chr2 (25-90)||(13803495-13803560)
chr2 (24-117)||(19322767-19322860)
[»] chr7 (37 HSPs)
chr7 (30-139)||(41519227-41519335)
chr7 (51-139)||(37473640-37473728)
chr7 (25-139)||(48771938-48772052)
chr7 (25-139)||(24513797-24513911)
chr7 (25-139)||(43590907-43591021)
chr7 (23-119)||(23552116-23552212)
chr7 (48-132)||(26703148-26703232)
chr7 (24-132)||(42711957-42712065)
chr7 (25-139)||(25590611-25590725)
chr7 (23-139)||(2446306-2446422)
chr7 (25-117)||(26459394-26459486)
chr7 (25-132)||(15137553-15137660)
chr7 (24-139)||(17040974-17041089)
chr7 (26-97)||(22927477-22927548)
chr7 (24-139)||(30579334-30579449)
chr7 (41-107)||(7499918-7499984)
chr7 (25-139)||(20335793-20335907)
chr7 (49-139)||(37085511-37085601)
chr7 (151-191)||(14074477-14074517)
chr7 (151-191)||(14384505-14384545)
chr7 (25-89)||(30442488-30442552)
chr7 (25-117)||(39631844-39631936)
chr7 (83-139)||(41975945-41976001)
chr7 (23-139)||(45709670-45709786)
chr7 (28-139)||(15905636-15905746)
chr7 (150-185)||(30406785-30406820)
chr7 (626-674)||(37381856-37381906)
chr7 (24-103)||(43215183-43215262)
chr7 (25-131)||(5579204-5579310)
chr7 (25-139)||(23301564-23301678)
chr7 (23-137)||(38374563-38374677)
chr7 (49-139)||(45228987-45229077)
chr7 (150-191)||(3401067-3401108)
chr7 (51-132)||(5934147-5934228)
chr7 (66-139)||(7309397-7309469)
chr7 (25-82)||(25021354-25021411)
chr7 (25-90)||(37233583-37233648)
[»] chr4 (34 HSPs)
chr4 (23-139)||(7949416-7949532)
chr4 (24-132)||(4185092-4185200)
chr4 (52-132)||(39509097-39509177)
chr4 (25-132)||(19238546-19238653)
chr4 (25-139)||(8030166-8030280)
chr4 (25-139)||(31826609-31826723)
chr4 (42-139)||(30938181-30938278)
chr4 (23-139)||(51250484-51250600)
chr4 (25-132)||(55427169-55427276)
chr4 (25-139)||(28635696-28635810)
chr4 (25-139)||(47044717-47044830)
chr4 (25-139)||(51948480-51948594)
chr4 (25-132)||(37443702-37443806)
chr4 (24-139)||(27965465-27965587)
chr4 (25-117)||(37109335-37109427)
chr4 (24-139)||(37720176-37720291)
chr4 (92-139)||(3606984-3607031)
chr4 (24-139)||(21660106-21660221)
chr4 (24-139)||(21668870-21668985)
chr4 (42-139)||(12793873-12793970)
chr4 (80-132)||(22096577-22096629)
chr4 (43-139)||(23377974-23378070)
chr4 (51-139)||(47386753-47386841)
chr4 (24-87)||(12798683-12798746)
chr4 (24-127)||(21344816-21344918)
chr4 (25-139)||(37274421-37274536)
chr4 (42-132)||(13015444-13015534)
chr4 (157-191)||(30797700-30797734)
chr4 (49-139)||(40283948-40284038)
chr4 (153-190)||(19602969-19603006)
chr4 (25-90)||(31759669-31759734)
chr4 (41-90)||(38869784-38869833)
chr4 (51-128)||(40058954-40059030)
chr4 (83-132)||(49262653-49262702)
[»] chr6 (18 HSPs)
chr6 (25-139)||(21418470-21418584)
chr6 (42-139)||(3715469-3715566)
chr6 (26-139)||(6758384-6758497)
chr6 (24-117)||(12188287-12188380)
chr6 (24-139)||(33549103-33549218)
chr6 (49-139)||(24641152-24641242)
chr6 (25-139)||(1056647-1056761)
chr6 (75-139)||(18263890-18263954)
chr6 (152-191)||(8037039-8037078)
chr6 (24-139)||(12234469-12234584)
chr6 (72-139)||(13441104-13441171)
chr6 (36-139)||(24507498-24507601)
chr6 (49-139)||(346555-346644)
chr6 (25-139)||(13227120-13227234)
chr6 (41-139)||(20213057-20213155)
chr6 (41-139)||(22107080-22107178)
chr6 (51-128)||(11448890-11448966)
chr6 (46-139)||(16405106-16405198)
[»] chr3 (26 HSPs)
chr3 (26-139)||(47454579-47454692)
chr3 (36-139)||(2667873-2667976)
chr3 (24-139)||(36720380-36720495)
chr3 (49-139)||(14339634-14339724)
chr3 (28-132)||(30510168-30510272)
chr3 (24-136)||(32651403-32651514)
chr3 (24-139)||(8051213-8051328)
chr3 (24-139)||(10499071-10499186)
chr3 (25-139)||(4222141-4222255)
chr3 (25-87)||(31788984-31789046)
chr3 (25-139)||(51903840-51903954)
chr3 (58-139)||(52769945-52770026)
chr3 (24-132)||(31520574-31520682)
chr3 (25-139)||(10445101-10445216)
chr3 (52-139)||(44743817-44743904)
chr3 (51-137)||(19716223-19716309)
chr3 (25-126)||(14186648-14186748)
chr3 (25-117)||(40063619-40063711)
chr3 (23-87)||(46518626-46518690)
chr3 (36-139)||(8075089-8075192)
chr3 (49-132)||(28531027-28531110)
chr3 (24-103)||(30311305-30311384)
chr3 (49-139)||(4844473-4844563)
chr3 (49-139)||(4870169-4870259)
chr3 (54-128)||(39041954-39042027)
chr3 (51-128)||(25289816-25289892)
[»] scaffold0172 (1 HSPs)
scaffold0172 (24-139)||(15739-15854)
[»] scaffold0258 (1 HSPs)
scaffold0258 (25-139)||(15285-15399)
[»] scaffold0118 (1 HSPs)
scaffold0118 (25-132)||(41602-41709)
[»] scaffold0417 (1 HSPs)
scaffold0417 (24-132)||(10218-10326)
[»] scaffold0074 (1 HSPs)
scaffold0074 (49-139)||(45721-45811)
[»] scaffold0337 (1 HSPs)
scaffold0337 (36-139)||(1764-1867)
[»] scaffold0299 (1 HSPs)
scaffold0299 (49-103)||(11552-11606)
[»] scaffold0115 (1 HSPs)
scaffold0115 (77-139)||(42626-42688)
[»] scaffold0009 (1 HSPs)
scaffold0009 (25-102)||(19846-19923)


Alignment Details
Target: chr1 (Bit Score: 353; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 16 - 521
Target Start/End: Complemental strand, 25494154 - 25493662
Alignment:
Q  16 tggagacgaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaat 115  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25494154 tggagacgaaacccacttgaattgacctagtggtattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaat 25494055  T
Q  116 ttaggtgggctaatttaacttcttnnnnnnnnnnt---catgtggagacgataaacttactactttattacttggtacgttgaatttcgtccataaatgg 212  Q
    |||| |||||||||||||||||||              ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  25494054 ttagatgggctaatttaacttcttaaaaaaaaaaaatccatgtggcgacgataaacttactactttattacttgttgcgttgaatttcgtccataaatgg 25493955  T
Q  213 atcatgatggataaaaatacgagggatggaaaggagataaaagagattccggtaataaggatataaggggagaagacccacggggatgaagacttttgaa 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||    
T  25493954 atcacgatggataaaaatacgagggatggaaaggagataaaagagattccggtaataaggatataagggga---------------tgaagacttttgaa 25493870  T
Q  313 gcatgacaaaacacaatatggagggaaaaggctatacaatgcacaaaagatcgaatactaactgtttctctacaaatcaaatcaaagtgatgagaataat 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25493869 gcatgacaaaacacaatatggagggaaaaggctatacaatgcacaaaagatcgaatactaactgtttctctacaaatcaaatcaaagtgatgagaataat 25493770  T
Q  413 ataatagaaaatgaaaagagacgcaatgaattaaaatgtactcctattgtacatgaaagaagatttaaaagnnnnnnnatgcgcaatgaattacaattta 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  25493769 ataatagaaaatgaaaagagacgcaatgaattaaaatgtactcctattgtacatgaaagaagatttaaaag-ttttttatgcgcaatgaattacaattta 25493671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 602 - 766
Target Start/End: Complemental strand, 25493497 - 25493333
Alignment:
Q  602 tatatataatgcatttaaggatggtatagtcaatttgatattatatatgaaactctataaaaactcgtgcatcatacaagttggagtctagttataataa 701  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25493497 tatatataatgcatttaaggatggtatagtcaatttgatattatatatgacactctatagaaactcgtgcatcatacaagttggagtctagttataataa 25493398  T
Q  702 aatgcttttagtctataagctctaggtcaaccacccacggaccctcagtttcgatggttattttt 766  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  25493397 aatgcttttagtctacaagctctaggtcaaccacccacggaccctcacttttgatggttattttt 25493333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 31794340 - 31794226
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| |||||||||||||  | ||||| |||| |||||| |||||| ||||||| ||| | || ||| |||||| ||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtggg 31794241  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  31794240 ctaatttagcttctt 31794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 50901581 - 50901695
Alignment:
Q  25 aacccacttgagttgacctagtgata-ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||||||| |||| ||||||| || ||||||||||| || | ||| |||| |||||||||||||| | |||| ||||| | |||| ||||||||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgg 50901679  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  50901680 gctaatttagcttctt 50901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 24047154 - 24047064
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||| ||  | ||||| |||| ||||||||||| || |||||| ||||||| |||| |||||||||| |||||||||||||||||    
T  24047154 tattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaatttaacttctt 24047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 33700847 - 33700735
Alignment:
Q  27 cccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggct 126  Q
    |||||||| |||| ||||||| ||||||||||| |||| ||||| |||| |||||| |||||||  ||||| ||||| || ||| ||||||| | ||| |    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtt 33700748  T
Q  127 aatttaacttctt 139  Q
    | |||||||||||    
T  33700747 agtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 6122793 - 6122908
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||| ||| |||| ||||||| ||| |||||||||  | ||||| |||| |||||| |||||||  ||||| ||| | |||||| |||||| |||||    
T  6122793 aaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgg 6122892  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  6122893 gctaatttagcttctt 6122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 17410242 - 17410345
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||||||| |||||| ||||||||| ||||| || | ||||||||| |||| |||||| |||||| |  || |||||||| | |||||||||||||    
T  17410242 gttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctcctttatgccaatttagataggctaatttaact 17410341  T
Q  136 tctt 139  Q
    ||||    
T  17410342 tctt 17410345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 21547557 - 21547442
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||| ||||| |||| ||||||| |||||||||||||  | ||||  |||| ||||||||||| ||  ||||| ||||| ||  || ||||||||||||    
T  21547557 aaaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgg 21547458  T
Q  124 gctaatttaacttctt 139  Q
    |||| |||||||||||    
T  21547457 gctagtttaacttctt 21547442  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 8177260 - 8177166
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||| |||||||| ||||||| |||||||||||||||| ||||| |||| |||||| |||| ||  ||||| ||||| || ||| ||||||    
T  8177260 gaaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 8177166  T

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Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 12587290 - 12587383
Alignment:
Q  45 gtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||| ||||||||||  |||| |||| ||||||||||||||  ||||| ||||| |  ||| ||||||||||||||||||||| ||||||    
T  12587290 gtgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttctt 12587383  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 27476823 - 27476733
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||  ||||||| |||| ||||||||| |||| |||| | ||||| || ||| | ||||||||||||||||||| ||||||    
T  27476823 tattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 52116857 - 52116743
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||| ||| |||| ||| ||| |||||||||||||  | ||||| |||| |||||| | |||||  ||||  |||||||||||| ||||| |||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtggg 52116758  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  52116757 ctaatttagcttctt 52116743  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 19528403 - 19528323
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccc 105  Q
    |||||||||| |||| ||| ||| ||||||||||||||||| |||| |||| |||||| |||||||  ||||| |||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctccc 19528323  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 40257398 - 40257513
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| |||||||||| || || ||||| |||| |||||||||||||| |||||  ||||  |  ||| |||||| |||||    
T  40257398 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgg 40257497  T
Q  124 gctaatttaacttctt 139  Q
    |||| |||| ||||||    
T  40257498 gctagtttagcttctt 40257513  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 17745328 - 17745234
Alignment:
Q  29 cacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||| |||| ||||||| ||||||||||||| ||  | || |||| ||||||||||||||  ||||| ||||| || ||| ||||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggtgg 17745234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 1094567 - 1094639
Alignment:
Q  67 gagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| |||| |||| ||||||||| | |||| ||||| |  ||| ||||||||||||||||||||||||||||    
T  1094567 gagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttctt 1094639  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 6650593 - 6650693
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||| ||  |||| ||||||| |||||||||||||||  ||||| |||| |||||| | |||||  ||||| ||||| || ||| |||||||||||    
T  6650593 gaaacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtg 6650692  T
Q  123 g 123  Q
    |    
T  6650693 g 6650693  T

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Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 3799953 - 3800020
Alignment:
Q  72 tgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| |||||||| || ||  ||||| ||||| |||||| ||||||||||||||||||||| ||||||    
T  3799953 tgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 4566547 - 4566626
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 103  Q
    ||||||||||| |||| ||||||||||||||||||| | || ||||| |||| ||||||  ||||||  ||||| |||||    
T  4566547 aaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctc 4566626  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 10526842 - 10526937
Alignment:
Q  44 agtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| ||||||||||||| || |||||||||| |||||| |||||||   |||| ||||| || | | |||||| |||||| ||||||| ||||||    
T  10526842 agtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttctt 10526937  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 52336839 - 52336736
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||||||| |||||||||||||||| ||||| |||| |||||  || ||||  ||||| || || || ||| |||||| | ||||||||||||| |    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaatttaatt 52336740  T
Q  136 tctt 139  Q
    ||||    
T  52336739 tctt 52336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 11768953 - 11768923
Alignment:
Q  151 catgtggagacgataaacttactactttatt 181  Q
    |||||||||||||||||||||||||||||||    
T  11768953 catgtggagacgataaacttactactttatt 11768923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 16893394 - 16893508
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| ||||||||  || |||||||||| ||| | ||||| | || ||||||||||||||  ||||| || || |  ||| ||||||  |||||    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtggg 16893493  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  16893494 ctaatttagcttctt 16893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 596
Target Start/End: Original strand, 30735574 - 30735628
Alignment:
Q  542 tgatattgaaaatgatgctaatttgatttcttcaataatatcattgtattattta 596  Q
    ||||||||||||||||  |||||| | || |||||||||||||||||| ||||||    
T  30735574 tgatattgaaaatgattttaatttaaattattcaataatatcattgtagtattta 30735628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 36124857 - 36124947
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||| ||  |||| |||| ||||| |||||||| |||| | | || ||||| | ||||||||||||||||||||| ||||||    
T  36124857 tattgacttgggacctgagagtgtgctcctccttgaggtctcaagtttgatccttcctagcgccaatttaggtgggctaatttagcttctt 36124947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 36371468 - 36371534
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtct 89  Q
    |||||||||||| |||| ||||||| ||||||||||| | || ||||| |||| |||||| ||||||    
T  36371468 gaaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtct 36371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 44961789 - 44961879
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| ||||| ||| || |||| |||| ||||||  ||||||  ||||| ||||| |||||| |||||| |||||||||||||| ||||||    
T  44961789 tattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 8077666 - 8077742
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    |||||||||||||| |||||||||| ||||  ||||||||  ||||| ||||| || ||| |||||| ||||||||||    
T  8077666 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 8077742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 8904413 - 8904506
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    ||||||||||| |||| ||||||  ||||| |||||||| |  |||| |||| |||||| ||||||| |||||| ||||| || ||| ||||||    
T  8904413 aaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 9165271 - 9165214
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctc 82  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| ||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 9165214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 10334089 - 10334052
Alignment:
Q  102 tccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| || ||||||||||||||||||||||||||||    
T  10334089 tccctaatgtcaatttaggtgggctaatttaacttctt 10334052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 31605898 - 31605817
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    ||||||||||| || | ||| |||| |||||| ||||||| |||||| |||||||  ||| |||||| ||||||||| ||||    
T  31605898 ttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagttta 31605817  T

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Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 16852339 - 16852454
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||||||| ||||||||||||| || ||||| |||| ||||||||||||||  ||||| |||||| ||||| ||||||||||||    
T  16852339 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgg 16852438  T
Q  124 gctaatttaacttctt 139  Q
    |||| |||| ||||||    
T  16852439 gctattttagcttctt 16852454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 23874458 - 23874345
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||| | |||  ||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggttcg-ttcttcctagtgacaatttaggtggg 23874360  T
Q  125 ctaatttaacttctt 139  Q
    |||||||||||||||    
T  23874359 ctaatttaacttctt 23874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 19703564 - 19703452
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||  |||| |||| |||||| |||||||  ||||| |||||||||||| ||||| ||||||    
T  19703564 aaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaattaaggtgg 19703465  T
Q  124 gctaatttaactt 136  Q
    |||||||||||||    
T  19703464 gctaatttaactt 19703452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 968362 - 968476
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    ||||||||||||||| ||| ||| ||||||||||||| || ||||| |||| ||||||||||||||  ||||| ||||| |   || |||||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtggg 968461  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  968462 ctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 23361725 - 23361618
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||||||| ||| ||||| |||||||| | ||||| |||| |||||| |||||||  ||||  ||||| || ||| |||||||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtggg 23361626  T
Q  125 ctaattta 132  Q
    ||||||||    
T  23361625 ctaattta 23361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 6536538 - 6536634
Alignment:
Q  43 tagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||||||||| |||||||| |||| |||||| |||||||  ||||  ||||| || ||| ||||||||||||| ||||||| ||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttctt 6536634  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 43594383 - 43594287
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    |||| ||||||||||||||||| |||||||||| | || | |||||| |||||||  ||||| ||||| |||||| |||||| | ||||||||||||    
T  43594383 gttggcctagtgatattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaattta 43594287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 44780192 - 44780076
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| |||| |||||||  ||||||||||||  | ||||| |||| |||||| |||||||  ||| | ||| | |||||| |||||| ||||    
T  44780192 gaaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtg 44780093  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  44780092 ggctaatttagcttctt 44780076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 11819776 - 11819890
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||| ||| |||| ||||||| ||| |||||||||  | ||||| |||| |||||| |||||||  ||||| ||| | |||||| |||||| ||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtggg 11819875  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  11819876 ctaatttagcttctt 11819890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 18540298 - 18540412
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| | ||||||||| |||||||  ||||| ||||| || ||| ||||||  | |||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagaggg 18540397  T
Q  125 ctaatttaacttctt 139  Q
     ||||||| ||||||    
T  18540398 ttaatttagcttctt 18540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 26688865 - 26688979
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| | ||||||||||| || ||||| |||| |||||| |||||||  ||||  |||| ||||||| |||||| ||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtggg 26688964  T
Q  125 ctaatttaacttctt 139  Q
    ||| |||| ||||||    
T  26688965 ctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 35690129 - 35690035
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatt 130  Q
    |||| ||||||| |||||||||||||||| || ||||||| |||||| |||||||  ||||| ||||| || ||| ||||||| || ||||||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaagtaggctaatt 35690035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 2203494 - 2203599
Alignment:
Q  27 cccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggct 126  Q
    |||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||| |||||||  | ||  |||||||  ||| |||||| ||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggct 2203593  T
Q  127 aattta 132  Q
    ||||||    
T  2203594 aattta 2203599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 28783058 - 28783174
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| |||| | | ||| |||||||||| || || ||||| |||| |||||| |||||||  ||||| ||||||   ||| |||||| ||||    
T  28783058 gaaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtg 28783157  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  28783158 ggctaatttagcttctt 28783174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 29858124 - 29858018
Alignment:
Q  26 acccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggc 125  Q
    |||||||||  ||| ||| ||| ||||||||||||| |  ||||| |||| ||||||||||||||  ||||| ||| ||   ||| ||||||||||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggc 29858025  T
Q  126 taattta 132  Q
    |||||||    
T  29858024 taattta 29858018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 3305240 - 3305151
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttct 138  Q
    |||||| ||||||||| ||||  |||| |||||| ||||||| | |||| || || || ||| ||||||||||||||||||||| |||||    
T  3305240 tattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaatttatcttct 3305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 5801046 - 5801119
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcg 97  Q
    ||||||||||| |||||||| ||| |||| ||||||||||||||||| |||| |  ||||| ||||| ||||||    
T  5801046 aaacccacttgggttgacctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctcaagttcg 5801119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 6569847 - 6569791
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcct 81  Q
    |||||||||  |||| |||||||||||||||||||||||| ||||| |||| |||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcct 6569791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 8484997 - 8485113
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| |||| ||| ||| |||| |||||||| ||  |||| |||| ||| | ||||||||   |||| ||||| |  ||| |||||||||||    
T  8484997 gaaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtg 8485096  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  8485097 ggctaatttagcttctt 8485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 18897165 - 18897265
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||||||| | |||| |||||| ||  |||| |||| |||||| |||||||  ||||| |||| ||| ||| ||||||||||||    
T  18897165 aaacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaatttaggtgg 18897264  T
Q  124 g 124  Q
    |    
T  18897265 g 18897265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 12957551 - 12957590
Alignment:
Q  152 atgtggagacgataaacttactactttattacttggtacg 191  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  12957551 atgtggagacgataagcttactactttattacttgttacg 12957590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 5264543 - 5264609
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    ||||||||||| |||| ||||||| ||||||||||| | || ||| | |||| ||||||||||||||    
T  5264543 aaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctc 5264609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 10287499 - 10287589
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||||  |||| | ||| |||||||||||||||||||  ||||  |||||| |  |  ||||||||||||||||||||| ||||||    
T  10287499 tattggcttgaaatctggaagtgtgcttctcctcgaggtctcaggttcaattctcctttatatcaatttaggtgggctaatttatcttctt 10287589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 11492125 - 11492035
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||| ||||| ||||| |||| || ||||||||||   ||||| |||||   |||| |||||| |||||||||||||| ||||||    
T  11492125 tattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 31087314 - 31087220
Alignment:
Q  45 gtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||||||||| ||||| | |  ||||||||||||||  ||||| || || |  ||| |||||||  | |||||||||||||||||    
T  31087314 gtgatattggcttgggatctgggagtatccccctcctcgaggtctcaggttcgattatctccggtgtcaatttaaataggctaatttaacttctt 31087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 13581880 - 13581847
Alignment:
Q  153 tgtggagacgataaacttactactttattacttg 186  Q
    |||||| |||||||||||||||||||||||||||    
T  13581880 tgtggaaacgataaacttactactttattacttg 13581847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 8e-20; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 29075781 - 29075895
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||  ||||||| |||||||||||||||| ||||| |||| ||||||||| ||||  ||||| ||||| || ||| |||||||| ||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatggg 29075880  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  29075881 ctaatttagcttctt 29075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 16773807 - 16773921
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||||||||  || ||| ||||| ||||||| || ||||| |||| ||||||||||||||  ||||| ||||| ||  || |||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtggg 16773906  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  16773907 ctaatttagcttctt 16773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 17028340 - 17028226
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||||||||||  |||||| ||||||  | ||||| |||| |||||| |||||||  ||| | ||| | |||||| |||||||||||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtggg 17028241  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  17028240 ctaatttagcttctt 17028226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 21589288 - 21589402
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| ||||||||||||| || ||||| |||| |||||||| |||||  ||||| ||| | || ||| |||||||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T
Q  125 ctaatttaacttctt 139  Q
    ||| |||| ||||||    
T  21589388 ctagtttagcttctt 21589402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 30883275 - 30883171
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| ||||  |||||| ||||||||||||| || ||||| |||| |||||| ||||||| |||||  ||||| | |||| |||||| |||||    
T  30883275 aaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggtgg 30883176  T
Q  124 gctaa 128  Q
    |||||    
T  30883175 gctaa 30883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 28285271 - 28285366
Alignment:
Q  44 agtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||| ||||| | | ||||||||| |||||| |||| ||| ||||| ||||  |||||| |||||| |||||||||||||| ||||||    
T  28285271 agtgatattggcatgggaccgaagagtttgctcctcctcaaggtatcgggttcgattctttctagtgtcaatttgggtgggctaatttagcttctt 28285366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 84851 - 84938
Alignment:
Q  52 tggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||||||| ||||| |||| |||||| ||||||| |||||| |||||||  ||| || | | |||||||||||||| ||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttctt 84938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 26078129 - 26078035
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||||| |||| ||||||| |||||| ||||||  | ||||| |||||||| || |||||||  ||||| ||||| |||||| ||||||    
T  26078129 gaaacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 587
Target Start/End: Original strand, 43550705 - 43550747
Alignment:
Q  545 tattgaaaatgatgctaatttgatttcttcaataatatcattg 587  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  43550705 tattgaaaatgattctaatttgatttcttcaataataccattg 43550747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 21549213 - 21549121
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||  | ||||| |||||| || || |||||| ||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt 21549121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 22020939 - 22020831
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||| |||| |||| | ||||| |||| ||||||||||| ||||| |||| ||||| || |||||   |||| ||||| | ||||  |||||||||||    
T  22020939 aaaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgg 22020840  T
Q  124 gctaattta 132  Q
    |||||||||    
T  22020839 gctaattta 22020831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 12877696 - 12877807
Alignment:
Q  28 ccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggcta 127  Q
    ||||||||||||  ||||||  ||||| ||||||| | ||||| || |||||||| | |||||  ||||| ||||| || ||   |||||||||||||||    
T  12877696 ccacttgagttggtctagtggcattggtttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggcta 12877795  T
Q  128 atttaacttctt 139  Q
    ||||| ||||||    
T  12877796 atttagcttctt 12877807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 29173529 - 29173604
Alignment:
Q  64 taggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||| |||| ||||||||||| ||  ||||| || || || ||| ||||||||||||||||||||| ||||||    
T  29173529 taggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 30109385 - 30109271
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| | | ||| |||||||||| || || ||||| |||| ||||| ||||||||  ||||| ||| |||  |||  |||||||||||    
T  30109385 aaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattcccccg-gtgctaatttaggtgg 30109287  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  30109286 gctaatttagcttctt 30109271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 4793088 - 4793042
Alignment:
Q  93 gttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  4793088 gttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 30000137 - 30000230
Alignment:
Q  46 tgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| |||||||||||||  ||||| |||  ||||||||||||||  |||||  |||| ||  || ||||||| ||||| ||||||||||||||    
T  30000137 tgattttggcttgggatccgggagtatgcacctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttctt 30000230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 33709679 - 33709603
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    |||||||||||||| |||||||||| ||||  |||||||| |||||| ||| | || ||| |||||| ||||||||||    
T  33709679 ttggcttgggatcttggagtttgctcctcc-agaggtctcaagttcgattccctctggtgccaatttcggtgggctaa 33709603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 8e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 1435064 - 1435177
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| | ||||| || ||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||| || ||| |||||| ||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctc-agttcgattctctctggtgtcaatttgggtggg 1435162  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  1435163 ctaatttagcttctt 1435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 33962857 - 33962746
Alignment:
Q  28 ccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggcta 127  Q
    ||||||| |||| |||| ||||||||| |||||| || ||||| |||| ||||||||| |||||  |||| |||||| ||||| |||||||||||| |||    
T  33962857 ccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctcctcgagatctcggattcgattctccttagtgccaatttaggtggacta 33962758  T
Q  128 atttaacttctt 139  Q
    ||||| ||||||    
T  33962757 atttatcttctt 33962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 23052599 - 23052492
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||  |||| ||| ||| |||||||||||||  | ||||| ||||||||||| |||||||  ||||| |||||||||||| || ||| ||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtggg 23052500  T
Q  125 ctaattta 132  Q
    ||||||||    
T  23052499 ctaattta 23052492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 39714989 - 39715099
Alignment:
Q  22 cgaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggt 121  Q
    ||||||||||||| |||| | | ||| ||||| ||||||| || ||||| |||| ||||||||||||||  ||||| ||||||| ||   ||||||||||    
T  39714989 cgaaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggt 39715088  T
Q  122 gggctaattta 132  Q
    |||||||||||    
T  39715089 gggctaattta 39715099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 29503270 - 29503384
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||||||| |||||| |||||| || ||||| |||| |||||| |||||||  ||||| |||||||  ||| ||||||| ||||    
T  29503270 aaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccc-ggtgtcaatttaagtgg 29503368  T
Q  124 gctaatttaacttctt 139  Q
    || |||||| ||||||    
T  29503369 gcaaatttagcttctt 29503384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 37480074 - 37480189
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| ||||||||||||| ||  |||| |||| |||||| |||||||  ||||| |||||||  ||  |||||| |||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgg 37480173  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  37480174 gctaatttagcttctt 37480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 42327471 - 42327364
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||| |||||||  ||||| |||||    ||| |||||| ||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtggg 42327372  T
Q  125 ctaattta 132  Q
    ||||||||    
T  42327371 ctaattta 42327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 12086203 - 12086091
Alignment:
Q  27 cccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggct 126  Q
    ||||||| ||||| ||| ||| ||||||||||||| || | ||| |||| |||||| |||||||| ||||| ||| | |  |||  ||||||||||||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggct 12086104  T
Q  127 aatttaacttctt 139  Q
    |||||| ||||||    
T  12086103 aatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 25637182 - 25637265
Alignment:
Q  56 ttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||| ||||| |||| || |||||||||||  ||||| ||||| |   || ||||||||||||||||||||||||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttctt 25637265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 42602553 - 42602668
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||||||| ||||||||||||| || ||||| |||| || ||| ||||||   ||| | ||||| |  ||| |||||| |||||    
T  42602553 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgg 42602652  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  42602653 gctaatttagcttctt 42602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Complemental strand, 96218 - 96173
Alignment:
Q  541 atgatattgaaaatgatgctaatttgatttcttcaataatatcatt 586  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||    
T  96218 atgatattaaaaatgattctaatttgatttcttcaatagtatcatt 96173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 11062360 - 11062425
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    |||||||||| |||| ||||||||||||||||||| |  | ||||| ||||||||||| |||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctc 11062425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 11251085 - 11251198
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||  |||| | ||||| |||||||||||||  | | ||| |||| |||||| |||||||  ||| | ||||| || ||| |||||||||||    
T  11251085 gaaacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtg 11251184  T
Q  123 ggctaatttaactt 136  Q
     |||||||||||||    
T  11251185 tgctaatttaactt 11251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 3001378 - 3001486
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||| |||||| |||| ||||||| ||||| |||| ||||||||||| |||| ||||| ||| ||||  ||||| || || || ||| || |||| ||||    
T  3001378 aaactcacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctctggtgccagtttatgtgg 3001477  T
Q  124 gctaattta 132  Q
    |||||||||    
T  3001478 gctaattta 3001486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 12517803 - 12517716
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||||| || |||||||||| |||||| |||||||  ||| | |||||||| ||| ||| || |||||||||||||| ||||||    
T  12517803 ttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctccctggtgccaa-ttgggtgggctaatttagcttctt 12517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 29197453 - 29197341
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| | | ||| ||||| |||||||  | ||||| |||| ||||| || |||||  ||||| |||| ||  ||| ||||||||||||    
T  29197453 aaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgg 29197354  T
Q  124 gctaatttaactt 136  Q
    |||||||||||||    
T  29197353 gctaatttaactt 29197341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 42860348 - 42860420
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcg 97  Q
    |||| |||||||||| ||| ||||||||| |||| || || ||||| |||| |||||||||||||| ||||||    
T  42860348 aacctacttgagttggcctggtgatattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcg 42860420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 7799112 - 7798998
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| |||||||||||||  | ||||| |||| ||||||||| ||||   |||| ||||| | |||| ||||||| || |    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-g 7799014  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  7799013 gctaatttagcttctt 7798998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 21195753 - 21195638
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||| ||| |||| ||||||| ||| ||||||| |  | ||||| |||| |||||| |||||||  ||||| ||| | |||||| |||||| | |||    
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgg 21195654  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  21195653 gctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 182
Target Start/End: Complemental strand, 21503451 - 21503420
Alignment:
Q  151 catgtggagacgataaacttactactttatta 182  Q
    ||||||||||||||||||||||||||||||||    
T  21503451 catgtggagacgataaacttactactttatta 21503420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 30359680 - 30359766
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttct 138  Q
    ||||||||||| || ||||| |||| |||||| ||||||| | |||| ||||||| |||| |||||| ||||||||| |||| |||||    
T  30359680 ttggcttgggaccttggagtgtgctcctcctcaaggtctc-atttcgattctccccagtgccaatttgggtgggctagtttagcttct 30359766  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3677405 - 3677351
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 103  Q
    ||||||||| ||||||| |||| ||||||||||||||||||  |||||| |||||    
T  3677405 tattggcttaggatctaagagtatgcttctcctcgaggtcttaagttcgattctc 3677351  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 19016055 - 19016145
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||| ||  | ||||| |||| |||||||||||||| |||| | |||||||  ||| ||||||| || |||||||||| ||||||    
T  19016055 tattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagcttctt 19016145  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 21213793 - 21213871
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggcta 127  Q
    ||||||||||||| || ||||| || | ||||| ||||||||  ||||| |||||||  ||| ||||||||||||||||    
T  21213793 tattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggcta 21213871  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 13803495 - 13803560
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    |||||| ||| ||||| ||||||||||||||||| ||  ||||||| |||| |||||| |||||||    
T  13803495 aacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctc 13803560  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19322767 - 19322860
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    ||||||||||| ||||| |||||| |||||| |||||| || ||||| |||| ||| || |||||||  ||| | ||||| |||||| ||||||    
T  19322767 aaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaattt 19322860  T

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Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 41519335 - 41519227
Alignment:
Q  30 acttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaat 129  Q
    ||||| |||| ||||||| ||||| |||||||| ||||||| |||| |||||| |||||||  ||||||||||| || ||| ||||||||||||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaat 41519237  T
Q  130 ttaacttctt 139  Q
    ||| ||||||    
T  41519236 ttagcttctt 41519227  T

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Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 37473640 - 37473728
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| |||||||||||||||||||| ||||| ||||||||  ||||| ||||||||| || ||||||||||||| ||||||| ||||||    
T  37473640 ttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttctt 37473728  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 48771938 - 48772052
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| | | ||| |||||||||||||||| ||||| |||| ||||| ||||||||  ||||| || |||| |||  |||||||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtggg 48772037  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  48772038 ctaatttagcttctt 48772052  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 24513797 - 24513911
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| |||||||||| ||| | ||||| | |||||||| ||||||||  ||||| || || ||  || |||||| ||||||    
T  24513797 aacccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtggg 24513896  T
Q  125 ctaatttaacttctt 139  Q
    |||||||||||||||    
T  24513897 ctaatttaacttctt 24513911  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 43590907 - 43591021
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||| ||| |||| ||| ||| |||||||||||||  | ||||| |||| |||||| | |||||  ||||| |||||||||||| ||||| |||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtggg 43591006  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  43591007 ctaatttagcttctt 43591021  T

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Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 23552116 - 23552212
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttag 119  Q
    |||||||||||| |||| ||||||| ||||| ||||||| || ||||| |||| |||||| ||||||| |||||| ||||| ||| || ||||||||    
T  23552116 gaaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaatttag 23552212  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 26703148 - 26703232
Alignment:
Q  48 atattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    ||||||||||||||||| ||||| |||| || |||||||||||  ||||  || |||||| || |||||||||||||||||||||    
T  26703148 atattggcttgggatctgggagtgtgctccttctcgaggtctcaggttcatttatccctaatgccaatttaggtgggctaattta 26703232  T

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Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 42711957 - 42712065
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||| |||||| |||| | ||||| |||| |||||| |  | ||||| |||| |||||| |||||||  ||||| |||||||||||| ||||||||||||    
T  42711957 aaactcacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgg 42712056  T
Q  124 gctaattta 132  Q
    |||||||||    
T  42712057 gctaattta 42712065  T

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Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 25590611 - 25590725
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| ||||||||  || |||||||||| ||||| ||||| |||| ||||||||||||||| ||||| || ||    ||| ||||||  |||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtggg 25590710  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  25590711 ctaatttagcttctt 25590725  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 2446306 - 2446422
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| ||||  ||  || |||||||||||||  | ||||| |||| ||||||||| |||| |||||| ||||| |  ||| | |||||||||    
T  2446306 gaaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtg 2446405  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  2446406 ggctaatttagcttctt 2446422  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 26459486 - 26459394
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||| |||||||  ||||| ||||| || ||| ||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 15137553 - 15137660
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| || || |||||||| ||||||| |||| |||||| |||||||  ||| | ||||| || ||| |||||| ||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtggg 15137652  T
Q  125 ctaattta 132  Q
    ||||||||    
T  15137653 ctaattta 15137660  T

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Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 17041089 - 17040974
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| ||||  ||||||  ||||||||||||||| | ||| |||| |||||| |||||||  ||||| ||||| | |||| |||||| |||||    
T  17041089 aaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgg 17040990  T
Q  124 gctaatttaacttctt 139  Q
    |  |||||| ||||||    
T  17040989 gtcaatttagcttctt 17040974  T

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Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 22927477 - 22927548
Alignment:
Q  26 acccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcg 97  Q
    ||||||||| |||| ||||||| ||||  |||||||||||||||| ||||||||||  ||||||| ||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgcttctcctaaaggtctccagttcg 22927548  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 30579334 - 30579449
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| |||||||||| || || ||||| | |  |||||| |||||||  ||||| || || || ||| ||||||||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgg 30579433  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  30579434 gctaatttagcttctt 30579449  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 7499984 - 7499918
Alignment:
Q  41 cctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctcccta 107  Q
    ||||||||||||||||||||| ||  ||||||||| ||| ||||||||||  ||||| |||||||||    
T  7499984 cctagtgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctcccta 7499918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 20335907 - 20335793
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| ||||  |||| | |||||||||||||  | ||||| |||| ||||||||||||||  ||||| ||||| |   || |||||| | ||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  125 ctaatttaacttctt 139  Q
    |||||||||||||||    
T  20335807 ctaatttaacttctt 20335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 37085601 - 37085511
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||| | ||||| ||||  |||||||||| ||  ||||| ||||||| | |  ||||||| ||||||||||||||||||||    
T  37085601 tattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaatttaacttctt 37085511  T

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Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 14074477 - 14074517
Alignment:
Q  151 catgtggagacgataaacttactactttattacttggtacg 191  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  14074477 catgtgaagacgataaacttactactttattacttgttacg 14074517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 14384505 - 14384545
Alignment:
Q  151 catgtggagacgataaacttactactttattacttggtacg 191  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  14384505 catgtgaagacgataaacttactactttattacttgttacg 14384545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 30442488 - 30442552
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtct 89  Q
    |||||||||| |||| || |||| ||||||||||||| || |||||||||| |||||| ||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtct 30442552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 39631844 - 39631936
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||| |||| ||||||| ||||||||||||| || |||||  ||| |||||| |||||||  ||||| ||||| || ||| ||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaattt 39631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 41975945 - 41976001
Alignment:
Q  83 gaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||| |||||| ||||| |||||| ||||||| ||||||||||||| ||||||    
T  41975945 gaggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 45709786 - 45709670
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||| ||| |||| ||||||| |||| |||||||||||  |||| |||| ||||||||||||||  ||||| || || |   |  |||||||||||    
T  45709786 gaaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtg 45709687  T
Q  123 ggctaatttaacttctt 139  Q
    |||||| ||| ||||||    
T  45709686 ggctaacttagcttctt 45709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 15905746 - 15905636
Alignment:
Q  28 ccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggcta 127  Q
    ||||||| |||| ||| | | ||||||||||||| || ||||| |||| |||||  |||||||  ||||| ||||||||| || |||||| |||||| ||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctccctaatgtcaatttgggtgggtta 15905648  T
Q  128 atttaacttctt 139  Q
    ||||| ||||||    
T  15905647 atttagcttctt 15905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 30406785 - 30406820
Alignment:
Q  150 tcatgtggagacgataaacttactactttattactt 185  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30406785 tcatgtggagacgattaacttactactttattactt 30406820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 674
Target Start/End: Original strand, 37381856 - 37381906
Alignment:
Q  626 tatagtcaatttgatatt--atatatgaaactctataaaaactcgtgcatc 674  Q
    ||||||||||||||||||  ||||||||||||||| |||||| ||||||||    
T  37381856 tatagtcaatttgatattttatatatgaaactctacaaaaacacgtgcatc 37381906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 43215183 - 43215262
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 103  Q
    ||||||||||| ||||  |||||| ||||||||||||| || ||||| |||| |||||| |||||||  ||||| |||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctc 43215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 5579310 - 5579204
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||||||| ||| | ||||||||||| || ||||| |||| |||||| |||||||  ||| |  ||||||  ||| |||||| ||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtggg 5579211  T
Q  125 ctaattt 131  Q
     ||||||    
T  5579210 ataattt 5579204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 23301678 - 23301564
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| ||||| |||||||  | ||||| |||| ||||| |||||||| |||| | |||||  |||||  |||||  ||||     
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtgga 23301579  T
Q  125 ctaatttaacttctt 139  Q
    |||||||||||||||    
T  23301578 ctaatttaacttctt 23301564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 38374677 - 38374563
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| |||| | | ||| | ||||||||||| ||  |||| |||| |||||| ||||||   ||||| |||||||  ||| |||||||||||    
T  38374677 gaaacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtg 38374578  T
Q  123 ggctaatttaacttc 137  Q
    ||||| |||| ||||    
T  38374577 ggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 45229077 - 45228987
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| |||||| |||||||| ||||||| || ||||| |   ||||| ||||| | |||| ||||||| ||||||||||||| ||||||    
T  45229077 tattggtttgggacctaggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagcttctt 45228987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 3401067 - 3401108
Alignment:
Q  150 tcatgtggagacgataaacttactactttattacttggtacg 191  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  3401067 tcatatggagacgataaaattactactttattacttgttacg 3401108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 5934147 - 5934228
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    |||||||||||||| ||||| |||| ||||| ||||| ||  ||||| ||| | || ||| |||||||||||| ||||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaatttaggtggactaattta 5934228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 7309397 - 7309469
Alignment:
Q  66 ggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| |||| |||||||||||||| |||||| ||||| |  ||| ||||||| ||||||||||||| ||||||    
T  7309397 ggagtgtgctcctcctcgaggtctcaagttcgattctctc-cgtgtcaatttaagtgggctaatttagcttctt 7309469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 25021411 - 25021354
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctc 82  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 25021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 37233648 - 37233583
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    |||||||||| |||||| | |||||||||||||||||| | ||||| |||| |||||  |||||||    
T  37233648 aacccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctccttaaggtctc 37233583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 7949532 - 7949416
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| | || ||||| | ||||||||||||| || ||||| |||| |||||| |||||||  ||||| ||||| || ||| |||||||||||    
T  7949532 gaaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtg 7949433  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  7949432 ggctaatttagcttctt 7949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 4185092 - 4185200
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||  ||||| || ||| |||||| ||||||  || |||| || | |||||||||||||| || ||| |||||||||||| ||||||||||||    
T  4185092 aaacccactttggttgatctggtggtattggtttgggacttaagagtgtgatcctcctcgaggtctcaagatcgattctccctagtgtcaatttaggtgg 4185191  T
Q  124 gctaattta 132  Q
    |||||||||    
T  4185192 gctaattta 4185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 39509097 - 39509177
Alignment:
Q  52 tggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    ||||||||||||| ||||| |||| ||||||||||||||  ||||| ||||||| |||| ||||||||||||| |||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaattta 39509177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 19238653 - 19238546
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| |||||||||||||  | ||||| |||| ||||||||||||||| ||||| |||||||  ||  |||||| ||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtggg 19238554  T
Q  125 ctaattta 132  Q
    ||||||||    
T  19238553 ctaattta 19238546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 8030280 - 8030166
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    ||||||||||  ||| ||||||| ||| |||||||||  | ||||| |||| |||||| ||||||| |||||| ||| | |||||| |||||| ||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtggg 8030181  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  8030180 ctaatttagcttctt 8030166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 31826609 - 31826723
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| ||| |||||||||| |  |||| |||| |||||| ||||||| |||||| ||| |  ||||| |||||| ||||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtggg 31826708  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  31826709 ctaatttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 30938278 - 30938181
Alignment:
Q  42 ctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| |||||| ||||||||| ||||| |||| ||||||||||||||  ||||| ||||||| | || ||||||||||||| || |||| ||||||    
T  30938278 ctagtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttctt 30938181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 51250600 - 51250484
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtg 122  Q
    |||||||||||| |||| ||| ||| |||||||||||||||| ||||| |||| | |||| || |||| |||||| ||| | |  ||| |||||| ||||    
T  51250600 gaaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtg 51250501  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  51250500 ggctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 55427276 - 55427169
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| ||||||||||||| || ||||| |||| || |||||||||||  ||||| ||||||   ||| |||||| ||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtggg 55427177  T
Q  125 ctaattta 132  Q
    ||||||||    
T  55427176 ctaattta 55427169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 28635696 - 28635810
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||| || || |||||||||| ||||| |||| ||||| |||||||   ||||| ||||| || ||| |||||| ||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtggg 28635795  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  28635796 ctaatttagcttctt 28635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 47044717 - 47044830
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    ||||||||||  ||| ||| ||| ||||| ||||||||||  ||||||||| ||||||||||||||  ||||| ||||||| || | ||||||||||||     
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctccc-agcgtcaatttaggtgga 47044815  T
Q  125 ctaatttaacttctt 139  Q
    | ||| |||||||||    
T  47044816 caaatataacttctt 47044830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 51948480 - 51948594
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||| ||  ||||| |||||||||||||||| |||  ||||||||||||||  ||||  ||||| | |||| |||||||  |||     
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaatttaaatgga 51948579  T
Q  125 ctaatttaacttctt 139  Q
    |||||||||||||||    
T  51948580 ctaatttaacttctt 51948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 37443702 - 37443806
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    | ||||||||||| ||  ||||| || || || ||| ||||||| |||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgggatctgggagt---gtactcctcgaggtttcatgttcgattatctctggtgccaatttatgtggg 37443798  T
Q  125 ctaattta 132  Q
    ||||||||    
T  37443799 ctaattta 37443806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 27965587 - 27965465
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttg-------cttctcctcgaggtctcgagttcgcttctccctagtgacaatt 116  Q
    ||||||||||| |||| ||||||| |||||||||||||||| ||||| ||       || ||||| |||||||| |||||| ||||| ||| || | |||    
T  27965587 aaacccacttgggttggcctagtggtattggcttgggatctgggagtgtgcagtggactcctccttgaggtctcaagttcgattctctctaatgtcgatt 27965488  T
Q  117 taggtgggctaatttaacttctt 139  Q
    || ||||||||||||| ||||||    
T  27965487 taagtgggctaatttaccttctt 27965465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 37109427 - 37109335
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||| |||||||  ||||| ||||| || ||| ||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 37720291 - 37720176
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtga-caatttaggtg 122  Q
    ||||||||||| |||| ||| ||| ||||||||||||| || ||||| |||  |||||| ||||| |  ||||| ||||||| || || |||||||||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctccc-agggatcaatttaggtg 37720193  T
Q  123 ggctaatttaacttctt 139  Q
    |||||||||| ||||||    
T  37720192 ggctaatttagcttctt 37720176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 3607031 - 3606984
Alignment:
Q  92 agttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  3607031 agttcgattccccctagtgtcaatttaggtgggctaatttaacttctt 3606984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 21660221 - 21660106
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||| ||||| ||||  || ||| ||||| |||| ||||| ||||| ||||  ||||||||||||| |||||| || || |||||| |||||||||| |    
T  21660221 aaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtag 21660122  T
Q  124 gctaatttaacttctt 139  Q
     |||||||| ||||||    
T  21660121 actaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 21668985 - 21668870
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||| ||||| ||||  || ||| ||||| |||| ||||| ||||| ||||  ||||||||||||| |||||| || || |||||| |||||||||| |    
T  21668985 aaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtag 21668886  T
Q  124 gctaatttaacttctt 139  Q
     |||||||| ||||||    
T  21668885 actaatttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 12793970 - 12793873
Alignment:
Q  42 ctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||||| ||||||  |||| ||||  ||| ||| || |  |||||| ||||| || ||| ||||||||||||||||||||| ||||||    
T  12793970 ctagtgatattggcttcggatctgtgagtgtgctcttccacgaagtattaagttcgattctctctggtgccaatttaggtgggctaatttagcttctt 12793873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 22096629 - 22096577
Alignment:
Q  80 ctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    |||||||||||  ||||| |||||||||||| ||||||| |||||||||||||    
T  22096629 ctcgaggtctcaggttcgattctccctagtgccaatttaagtgggctaattta 22096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 23377974 - 23378070
Alignment:
Q  43 tagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||||||||| || ||||| |||| |||||| |||||||  ||||| ||||| |||||| ||||||  | |||||| |||| ||||||    
T  23377974 tagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttctt 23378070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 47386841 - 47386753
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| |||||||  ||||  |||||| || ||||||||  ||||  ||||| |||||| ||||||||||||||||||||| ||||||    
T  47386841 ttggctagggatctgagagtgcgcttcttcttgaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttctt 47386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 12798683 - 12798746
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggt 87  Q
    ||||||||||| ||||||| |||| |||||| ||| ||||| ||||| |||| |||||||||||    
T  12798683 aaacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggt 12798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 21344816 - 21344918
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| |||  |||| ||||||||||| || ||||| |||| ||| || |||||||  ||||  ||||||| |||| ||||||||||||    
T  21344816 aaacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcctc-tcaaggtctcatgttcaattctccccagtgtcaatttaggtgg 21344914  T
Q  124 gcta 127  Q
    ||||    
T  21344915 gcta 21344918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 37274536 - 37274421
Alignment:
Q  25 aacccacttgagttgacctagtgata-ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||||||| |||| ||||||  || ||||||||||| || ||||| |||| |||||| ||||||   ||||| ||||| || |||  |||||| ||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgg 37274437  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  37274436 gctaatttagcttctt 37274421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 13015444 - 13015534
Alignment:
Q  42 ctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    |||||| |||||||||||||  | ||||| |||| |||||||| |||||  ||||| ||||| |  ||| ||||||||||||| |||||||    
T  13015444 ctagtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaattta 13015534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 30797700 - 30797734
Alignment:
Q  157 gagacgataaacttactactttattacttggtacg 191  Q
    |||||||||||||||||||||||||||||| ||||    
T  30797700 gagacgataaacttactactttattacttgttacg 30797734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 40284038 - 40283948
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||  | ||||| ||| ||||||| ||||||   ||| | |||| | | ||| ||||||||||||||||||||||||||||    
T  40284038 tattggcttgggacttgggagtgtgcatctcctcaaggtctaaggtttgattctgcttggtgccaatttaggtgggctaatttaacttctt 40283948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 19602969 - 19603006
Alignment:
Q  153 tgtggagacgataaacttactactttattacttggtac 190  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  19602969 tgtggagacgattaacttactgctttattacttggtac 19603006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 31759734 - 31759669
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    |||||||||| ||||| |||||| |||||||||||||  | ||||| |||| |||||| |||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctc 31759669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 38869784 - 38869833
Alignment:
Q  41 cctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctc 90  Q
    ||||||| |||||||||||||||| ||||| |||| |||||| |||||||    
T  38869784 cctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctc 38869833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 40059030 - 40058954
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    |||||||||||||| |||||||||| || || ||||||||  ||||| ||||| || ||| |||||| ||||||||||    
T  40059030 ttggcttgggatcttggagtttgctcct-ctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 40058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 49262702 - 49262653
Alignment:
Q  83 gaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    ||||||||  ||||| ||||||| |||| |||||||||||||||||||||    
T  49262702 gaggtctcaggttcgattctccccagtgccaatttaggtgggctaattta 49262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 21418470 - 21418584
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||| ||| |||| ||| ||| |||||||||||||  | ||||| |||| |||||| | ||||| |||||| |||||||||||| ||||| |||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtggg 21418569  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  21418570 ctaatttagcttctt 21418584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 3715469 - 3715566
Alignment:
Q  42 ctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| ||||| |||| ||||| ||||| |||||||| |||||||||| |||||| ||||| | |||| ||||||||||||||| ||||| ||||||    
T  3715469 ctagtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttaggtgggctgatttagcttctt 3715566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 6758497 - 6758384
Alignment:
Q  26 acccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggc 125  Q
    ||||||||| |||| ||| ||| ||||||||| |||| | ||||| |||| | |||||||||||| || ||| ||||| || ||| ||||||||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggc 6758398  T
Q  126 taatttaacttctt 139  Q
     |||||| ||||||    
T  6758397 aaatttagcttctt 6758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 12188380 - 12188287
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    ||||||||||| |||| ||||||| ||||||||||||| || ||||| |||| |||||| |||| || |||||| ||||| |||||| ||||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaattt 12188287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 33549103 - 33549218
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| ||||  || ||| ||||||||||||| || ||||| |||| ||||||||||||||  ||||| ||||| |   || |||||||||||     
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtga 33549202  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  33549203 gctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 24641242 - 24641152
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| |||||||||| ||||| |||| ||||||||||| |   ||||| ||||||  | || ||||||||||||||||||||||||||||    
T  24641242 tattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaatttaacttctt 24641152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 1056761 - 1056647
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||||||||||| ||||||| |||||  | ||||| ||||  ||||| |||| |  |||||| ||||| || ||| ||| |||||||||    
T  1056761 aacccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtggg 1056662  T
Q  125 ctaatttaacttctt 139  Q
     ||||||| ||||||    
T  1056661 ttaatttagcttctt 1056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 18263890 - 18263954
Alignment:
Q  75 ttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||| |||||| |  ||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  18263890 ttctccttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 18263954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 8037039 - 8037078
Alignment:
Q  152 atgtggagacgataaacttactactttattacttggtacg 191  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  8037039 atgtggagacggtaaacttactactttattacttgttacg 8037078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 12234584 - 12234469
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||  |||| ||| ||| ||||| ||||||| || ||||| |||| |  |||||||||||  ||||| ||||| | |||| |||||||| |||    
T  12234584 aaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgg 12234485  T
Q  124 gctaatttaacttctt 139  Q
    | ||||||| ||||||    
T  12234484 gataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 13441104 - 13441171
Alignment:
Q  72 tgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||| |||| ||||||||| |||||| |||| |  |||| ||||||| ||||||||||||||||||||    
T  13441104 tgctcctccacgaggtctcaagttcgattcttctcagtgccaatttaagtgggctaatttaacttctt 13441171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 24507601 - 24507498
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||||||| | ||||||||||| || |||||||||| |||||| |||||| | ||||  ||||| |  ||  ||||||||||||| || |||||||    
T  24507601 gttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgggttagtttaact 24507502  T
Q  136 tctt 139  Q
    ||||    
T  24507501 tctt 24507498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 346555 - 346644
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||| || ||||| |||||||||||||||||||  ||||| ||||| |  ||| ||||||| || |||||||||| ||||||    
T  346555 tattgacttgggacct-ggagtgtgcttctcctcgaggtctcatgttcgattctcacccgtgtcaatttaagtaggctaatttatcttctt 346644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 13227234 - 13227120
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||  ||| ||||||  || ||||| ||||| |||| |||||||| ||||| |||||| ||||| |   || || ||||||||||    
T  13227234 aacccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttcgattctctcatatgtcagtttaggtggg 13227135  T
Q  125 ctaatttaacttctt 139  Q
    | |||||||||||||    
T  13227134 ccaatttaacttctt 13227120  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 20213057 - 20213155
Alignment:
Q  41 cctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||| |||  |||||||| || ||||| |||| |||||| | |||||  ||||| ||| | |||||| |||||| |||||||||||||| ||||||    
T  20213057 cctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 20213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 22107080 - 22107178
Alignment:
Q  41 cctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||| |||  |||||||| || ||||| |||| |||||| | |||||  ||||| ||| | |||||| |||||| |||||||||||||| ||||||    
T  22107080 cctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 22107178  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 11448890 - 11448966
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    |||||||||||||| |||||||||| ||||  ||||||||  ||||| ||||| || ||| |||||| ||||||||||    
T  11448890 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 11448966  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 16405106 - 16405198
Alignment:
Q  46 tgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||   |||| ||||| |  ||| |||||||||| | |||||||| ||||||    
T  16405106 tgatattggtttgggacctgggagtgtgcttctcctcgaggtctcagtttcgattctcacctgtgtcaatttaggt-gactaatttagcttctt 16405198  T

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Target: chr3 (Bit Score: 46; Significance: 8e-17; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 47454692 - 47454579
Alignment:
Q  26 acccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggc 125  Q
    ||||||||| ||||  |||||| |||||||||| ||||| ||||| |||| ||||||||||||||  ||||| ||||||| | || |||||||||||||     
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggt 47454593  T
Q  126 taatttaacttctt 139  Q
    || |||| ||||||    
T  47454592 tagtttagcttctt 47454579  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 2667873 - 2667976
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||| ||| |||||||||||||||| ||||| ||||  |||||||||||||  ||||| || || |||||| |||||||||||||||| |||| ||    
T  2667873 gttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagct 2667972  T
Q  136 tctt 139  Q
    ||||    
T  2667973 tctt 2667976  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 36720380 - 36720495
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| ||||  || ||| |||||||||||||| | ||||| |||| ||||||||||| ||  ||||| ||||| |||||| ||||||||||||    
T  36720380 aaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtgg 36720479  T
Q  124 gctaatttaacttctt 139  Q
    |||  |||| ||||||    
T  36720480 gctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 14339634 - 14339724
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||||||||||| | ||||| |||| |||||| | |||||  ||||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  14339634 tattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttctt 14339724  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 30510272 - 30510168
Alignment:
Q  28 ccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggcta 127  Q
    ||||||| |||| ||| ||| || |||||||||| |||||||| |||| || |||||||||||  ||||| ||||| |||||| |||| || ||||||||    
T  30510272 ccacttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaatctaagtgggcta 30510173  T
Q  128 attta 132  Q
    |||||    
T  30510172 attta 30510168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 32651514 - 32651403
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||||||| ||||| ||||||| ||||||||||||| || ||||| |||| |||||| || ||||   |||| ||||| |||||| |||||||| |||    
T  32651514 aaacccactt-agttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgg 32651416  T
Q  124 gctaatttaactt 136  Q
    |||| ||||||||    
T  32651415 gctagtttaactt 32651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 8051213 - 8051328
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| ||||||||||||| || | ||| ||||||||||||||||||| |||||| ||| | |  ||| |||||||| |||    
T  8051213 aaacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttgg 8051312  T
Q  124 gctaatttaacttctt 139  Q
    |||  |||| ||||||    
T  8051313 gctcgtttagcttctt 8051328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 10499186 - 10499071
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| ||| |||||||||||||||| ||||| ||||  |||| ||||||||  ||||| ||||| |   || |||||| |||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgg 10499087  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  10499086 gctaatttagcttctt 10499071  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 4222141 - 4222255
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| | ||||| |||||||||||||||| ||||| |||| |||||| | ||||   ||||| ||||| || ||| ||||||||||| |    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgag 4222240  T
Q  125 ctaatttaacttctt 139  Q
     || |||||||||||    
T  4222241 ttagtttaacttctt 4222255  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 31789046 - 31788984
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggt 87  Q
    |||||||||| |||| ||||||| |||||||||||||||| ||||| |||| |||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggt 31788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 51903954 - 51903840
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    ||||||| || ||||||||  || |||||||||||||||| ||||| |||| ||||||| ||||||  ||||| ||||| |  ||| ||||||  |||||    
T  51903954 aacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtggg 51903855  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  51903854 ctaatttagcttctt 51903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 52770026 - 52769945
Alignment:
Q  58 gggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||| ||||| |||| ||||| ||||||||  ||||| |||||  ||||| ||||||||||||||||||||| ||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttctt 52769945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 31520682 - 31520574
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| ||| |||  ||||||||||||||| ||||| |||| |||||||||||||   ||| | ||||| | |||| ||||||  ||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgg 31520583  T
Q  124 gctaattta 132  Q
    |||||||||    
T  31520582 gctaattta 31520574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 10445216 - 10445101
Alignment:
Q  25 aacccacttgagttgacctagtgata-ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||||||| |||| |||||||  | ||||||||||| || ||||| |||| ||||||||||||||  ||||| ||||| || |||  |||||  ||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgg 10445117  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  10445116 gctaatttagcttctt 10445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 44743904 - 44743817
Alignment:
Q  52 tggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||||||||||| ||||| |||| ||||||||||||||  ||||| || || | |||| |||||| |||||| ||||||| ||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttctt 44743817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 19716223 - 19716309
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttc 137  Q
    ||||||||||| |  ||||| |||| |||||| |||||||  ||||| |||||||  |||||||||| |||||||||||||| ||||    
T  19716223 ttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 14186648 - 14186748
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| ||||| ||||||| || ||||| |||| |||||| |||||||  ||||| ||||| |  ||| |||||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtggg 14186746  T
Q  125 ct 126  Q
    ||    
T  14186747 ct 14186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 40063619 - 40063711
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaattt 117  Q
    |||||||||| |||||| ||||  ||||||||||||||||  |||| |||| |||||  ||||||| |||||| ||||| | |||| ||||||    
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaattt 40063711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 46518626 - 46518690
Alignment:
Q  23 gaaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggt 87  Q
    |||||||||||| |||| | ||||| |||||||||||||||| ||||| |||| |||||| ||||    
T  46518626 gaaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggt 46518690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 8075192 - 8075089
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||||||| ||| |||||||||  | ||||| |||| |||||| |||| ||  ||||| ||| | |||||| |||||| |||||||||||||| ||    
T  8075192 gttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagct 8075093  T
Q  136 tctt 139  Q
    ||||    
T  8075092 tctt 8075089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 28531110 - 28531027
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaattta 132  Q
    |||||||||||||||| ||||| |||| |||||||||||||   | ||  ||||| || ||| |||||| ||||||||||||||    
T  28531110 tattggcttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaattta 28531027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 30311305 - 30311384
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 103  Q
    |||||||| || |||| ||||||| ||| |||||||||||| ||||| |||| |||||| |||||||  ||||| |||||    
T  30311305 aaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 30311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 4844563 - 4844473
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| |||||||||| ||||| |||| ||||||||||||||  | ||| ||||| |  ||| ||||||  ||||||||||||| ||||||    
T  4844563 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 4870259 - 4870169
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| |||||||||| ||||| |||| ||||||||||||||  | ||| ||||| |  ||| ||||||  ||||||||||||| ||||||    
T  4870259 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4870169  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 39042027 - 39041954
Alignment:
Q  54 gcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    ||||||||||| |||||||||| ||||  |||||||| |||||| ||||| || ||| |||||| ||||||||||    
T  39042027 gcttgggatcttggagtttgctcctcc-agaggtctcaagttcgattctctctggtgccaatttcggtgggctaa 39041954  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 25289892 - 25289816
Alignment:
Q  51 ttggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaa 128  Q
    |||||||||||||| |||||||||| ||||  ||||||||  ||||| ||| | |||||| |||||| ||||||||||    
T  25289892 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattccctctagtgccaatttcggtgggctaa 25289816  T

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Target: scaffold0172 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 15854 - 15739
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    |||||||||| ||||| ||| ||| |||||||||||||| | ||||| |||| |||||| ||||||| |||| | ||||||   ||| |||||| |||||    
T  15854 aaacccacttaagttggcctggtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgg 15755  T
Q  124 gctaatttaacttctt 139  Q
    ||||||||| ||||||    
T  15754 gctaatttagcttctt 15739  T

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Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 15399 - 15285
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| ||||  || ||| ||||||||||||| || ||||| |||| ||||||||||||||  ||||| ||||| |   || |||||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtggg 15300  T
Q  125 ctaatttaacttctt 139  Q
    |||||||| ||||||    
T  15299 ctaatttagcttctt 15285  T

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Target: scaffold0118 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 41709 - 41602
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtggg 124  Q
    |||||||||| |||| ||||||| |||||||||| |||||  |||| |||| ||||||||||||||  ||||  ||||| ||  || |||||| ||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtggg 41610  T
Q  125 ctaattta 132  Q
    ||||||||    
T  41609 ctaattta 41602  T

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Target: scaffold0417 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 10218 - 10326
Alignment:
Q  24 aaacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgg 123  Q
    ||||||||||| |||| |||  ||||||||||||||||||| |||||  || ||||||||| ||||  |||| | ||||| | | || ||||||| ||||    
T  10218 aaacccacttgggttggcctgatgatattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctcaaatgccaatttaagtgg 10317  T
Q  124 gctaattta 132  Q
    |||||||||    
T  10318 gctaattta 10326  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 45811 - 45721
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    ||||| ||||||| |||||||| || | ||||| ||||||||  ||||| ||||| || ||| ||||||||||||| || |||||||||||    
T  45811 tattgccttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttaggtgggttagtttaacttctt 45721  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 1764 - 1867
Alignment:
Q  36 gttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaact 135  Q
    |||| ||||||| | ||||||||||| || |||||||||| |||||| |||||| | ||||  ||||| |  ||  ||||||||||||| || |||||||    
T  1764 gttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgggttagtttaact 1863  T
Q  136 tctt 139  Q
    ||||    
T  1864 tctt 1867  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 11552 - 11606
Alignment:
Q  49 tattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 103  Q
    |||||||||||||||| ||||| |||| ||||||||||||||  ||||| |||||    
T  11552 tattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 11606  T

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Target: scaffold0115 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 42688 - 42626
Alignment:
Q  77 ctcctcgaggtctcgagttcgcttctccctagtgacaatttaggtgggctaatttaacttctt 139  Q
    |||||| || |||| |||||| |||||  | ||| ||||||||||||||||||||||||||||    
T  42688 ctcctcaagatctcaagttcgattctctatggtgtcaatttaggtgggctaatttaacttctt 42626  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 19923 - 19846
Alignment:
Q  25 aacccacttgagttgacctagtgatattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttct 102  Q
    ||||||||||| ||| | |  || |||||||||||||||| ||||| |||| ||||| |||||||| |||||| ||||    
T  19923 aacccacttgaattggcatgatggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

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