View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12357_low_5 (Length: 238)
Name: NF12357_low_5
Description: NF12357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12357_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 7963029 - 7962825
Alignment:
| Q |
19 |
aagttcaattctgatgagttgaataagagcaatgaaggagatgagagagaaagaagcacatagagtgtagaaaagtggggagtgagtggaatcacggtga |
118 |
Q |
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| T |
7963029 |
aagttcaattctgatgagttgaataagagcaatgaaggagatgagagagaaagaagcacatagagtgtagaaaagtggggaatgagtggaatcacggtga |
7962930 |
T |
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| Q |
119 |
aaccatgaagatgaatcggagaaggagaagaaaagtgaaagtgttagcttaagttgctccatgttttgtaacactttccacccaataactcataaacaga |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
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| T |
7962929 |
aaccatgaagatgaatcggagaaggagaagaaaagtgaaagtgttagcttaagttgctccatgttttgtaacagtttccacccaataactcaaaaacaga |
7962830 |
T |
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| Q |
219 |
acaca |
223 |
Q |
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||||| |
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| T |
7962829 |
acaca |
7962825 |
T |
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