View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12360_high_18 (Length: 210)
Name: NF12360_high_18
Description: NF12360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12360_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 3292276 - 3292425
Alignment:
| Q |
19 |
aatcagtacttatctatatctaattgtagttacatattttatcaaccttatagttcaatatannnnnnnnnnnngtaaagttagtaaaaataacatttta |
118 |
Q |
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| T |
3292276 |
aatcagtacttatttatatctaattgtagttacatattttatcaaccttatagttcaatat------tttttatgtaaagttagtaaaaataacatttta |
3292369 |
T |
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| Q |
119 |
tcaaccttgtagtctnnnnnnnnccttttaattggattggttgtaatgtatagaaaag |
176 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
3292370 |
tcaaccttgtagtct--aaaaaaccttttaattggattggttgtaatgtatagaaaag |
3292425 |
T |
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