View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12362_high_8 (Length: 325)
Name: NF12362_high_8
Description: NF12362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12362_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 31 - 316
Target Start/End: Original strand, 16736823 - 16737110
Alignment:
| Q |
31 |
ataaatcacgcaagggcggataaaattggatatcaacacatttggaggagttaagaaattggcaatcgaggaaccaaatttcttatttgacaatggtttg |
130 |
Q |
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| T |
16736823 |
ataaatcacgcaagggcggataaaattgggtgtcaacgcatttggaggagttaagaaattggcaatcgaggaaccaaatttcttctttgacaatggtttg |
16736922 |
T |
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| Q |
131 |
aagaaaaaga---taaatattattaagatctagtagctaaatatacgactaacctttaagttggacaacaataaatctaacttaattattaaaagggatg |
227 |
Q |
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|||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
16736923 |
aagaaaaaaaatataaatattattacgatctagtagctaaatatacgactaacctttaagttggacaacaataaatataacttaattattaaaagggatg |
16737022 |
T |
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| Q |
228 |
aaacaaatgaaatgggtcctctttg-cagtttaagagagagatagatagataaaattaatgaagagggcggcaaatgtataagagcacag |
316 |
Q |
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|||||||| ||||| |||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16737023 |
aaacaaattaaatgagtcctctttgccaattta--agagagaaagatagataaaattaatgaagagggcggcaaatgtataagagcacag |
16737110 |
T |
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