View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12366_high_4 (Length: 306)

Name: NF12366_high_4
Description: NF12366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12366_high_4
NF12366_high_4
[»] chr6 (34 HSPs)
chr6 (34-304)||(10008172-10008442)
chr6 (195-285)||(19418593-19418683)
chr6 (172-285)||(5611130-5611244)
chr6 (34-106)||(35165659-35165731)
chr6 (165-286)||(11101897-11102019)
chr6 (196-285)||(10252964-10253053)
chr6 (16-104)||(29864749-29864837)
chr6 (217-288)||(27082306-27082377)
chr6 (16-102)||(3109349-3109435)
chr6 (139-270)||(17900713-17900845)
chr6 (142-262)||(26608878-26608998)
chr6 (16-100)||(10262807-10262887)
chr6 (198-265)||(18493261-18493328)
chr6 (16-106)||(7104533-7104623)
chr6 (16-106)||(8790007-8790097)
chr6 (16-101)||(6475743-6475828)
chr6 (204-273)||(17506274-17506345)
chr6 (167-262)||(21809802-21809898)
chr6 (16-104)||(31068429-31068517)
chr6 (195-286)||(22297603-22297693)
chr6 (204-273)||(4803165-4803235)
chr6 (220-304)||(9213092-9213179)
chr6 (16-106)||(31896646-31896736)
chr6 (216-281)||(12677822-12677887)
chr6 (221-281)||(19659665-19659725)
chr6 (172-298)||(32134030-32134158)
chr6 (188-264)||(2613370-2613448)
chr6 (216-286)||(17835022-17835092)
chr6 (195-303)||(32800183-32800293)
chr6 (16-81)||(27585205-27585270)
chr6 (215-271)||(8636789-8636845)
chr6 (16-100)||(14261552-14261636)
chr6 (169-232)||(17345840-17345904)
chr6 (221-285)||(30699823-30699887)
[»] chr8 (71 HSPs)
chr8 (16-85)||(9209911-9209980)
chr8 (17-100)||(4302112-4302195)
chr8 (34-104)||(37566518-37566588)
chr8 (34-101)||(30381822-30381889)
chr8 (16-106)||(7149035-7149125)
chr8 (172-272)||(44648939-44649040)
chr8 (188-299)||(3137383-3137495)
chr8 (16-104)||(9458508-9458596)
chr8 (166-265)||(20821908-20822008)
chr8 (126-273)||(29795515-29795663)
chr8 (16-104)||(40264272-40264360)
chr8 (16-102)||(4656077-4656163)
chr8 (196-270)||(39065560-39065634)
chr8 (222-288)||(44655286-44655352)
chr8 (195-271)||(9791885-9791961)
chr8 (190-290)||(18200701-18200801)
chr8 (16-104)||(28620685-28620772)
chr8 (215-290)||(10029155-10029230)
chr8 (190-285)||(32881111-32881206)
chr8 (16-106)||(14781243-14781333)
chr8 (216-286)||(30924212-30924281)
chr8 (195-285)||(43917585-43917675)
chr8 (171-271)||(1551507-1551608)
chr8 (16-97)||(10795379-10795460)
chr8 (16-97)||(14062493-14062574)
chr8 (195-288)||(28462569-28462660)
chr8 (217-286)||(37530004-37530073)
chr8 (203-287)||(24757081-24757165)
chr8 (223-286)||(18131189-18131251)
chr8 (218-273)||(30924842-30924897)
chr8 (171-241)||(33621408-33621479)
chr8 (144-286)||(41675644-41675786)
chr8 (196-286)||(900260-900349)
chr8 (169-286)||(11150920-11151037)
chr8 (195-265)||(14110639-14110708)
chr8 (16-102)||(18957833-18957919)
chr8 (16-102)||(32498900-32498986)
chr8 (172-285)||(35901417-35901531)
chr8 (16-94)||(43604382-43604460)
chr8 (16-106)||(44724892-44724982)
chr8 (16-105)||(18305073-18305162)
chr8 (166-254)||(37564779-37564868)
chr8 (196-273)||(39534164-39534241)
chr8 (236-288)||(13907406-13907458)
chr8 (133-256)||(34832302-34832426)
chr8 (172-286)||(20542384-20542499)
chr8 (172-283)||(40489850-40489961)
chr8 (16-95)||(42275945-42276024)
chr8 (31-97)||(1605804-1605870)
chr8 (232-270)||(3670555-3670593)
chr8 (216-270)||(13461963-13462017)
chr8 (195-241)||(34678232-34678278)
chr8 (203-257)||(35762316-35762369)
chr8 (203-265)||(37919417-37919479)
chr8 (204-270)||(38388536-38388602)
chr8 (16-49)||(5266793-5266826)
chr8 (218-286)||(10451895-10451964)
chr8 (183-240)||(12201835-12201892)
chr8 (183-240)||(12446263-12446320)
chr8 (237-286)||(19781429-19781478)
chr8 (222-283)||(23797545-23797606)
chr8 (237-290)||(27162828-27162881)
chr8 (16-101)||(39466634-39466719)
chr8 (65-102)||(41385869-41385906)
chr8 (215-283)||(600372-600440)
chr8 (30-102)||(10128278-10128350)
chr8 (65-97)||(17791619-17791651)
chr8 (214-286)||(23725669-23725741)
chr8 (64-96)||(38805929-38805961)
chr8 (204-288)||(39209398-39209479)
chr8 (65-101)||(42366947-42366983)
[»] chr2 (59 HSPs)
chr2 (16-104)||(38821248-38821336)
chr2 (17-97)||(34027781-34027861)
chr2 (34-108)||(12135553-12135627)
chr2 (167-283)||(27896463-27896580)
chr2 (217-286)||(43131806-43131875)
chr2 (195-287)||(4978777-4978869)
chr2 (195-287)||(4996685-4996777)
chr2 (34-106)||(24935286-24935358)
chr2 (34-106)||(25683979-25684051)
chr2 (34-102)||(11535693-11535761)
chr2 (16-104)||(29941890-29941978)
chr2 (195-270)||(43248714-43248789)
chr2 (16-106)||(25289164-25289254)
chr2 (16-102)||(45547916-45548002)
chr2 (198-271)||(37913032-37913105)
chr2 (195-271)||(143876-143952)
chr2 (16-104)||(7486954-7487042)
chr2 (204-288)||(19606305-19606389)
chr2 (34-102)||(24192662-24192730)
chr2 (172-285)||(13738396-13738510)
chr2 (195-285)||(36622101-36622191)
chr2 (166-283)||(40574138-40574256)
chr2 (34-99)||(30046604-30046669)
chr2 (34-99)||(30137648-30137713)
chr2 (16-104)||(18178281-18178369)
chr2 (17-61)||(20156621-20156665)
chr2 (16-104)||(26789794-26789882)
chr2 (195-286)||(1870519-1870609)
chr2 (172-286)||(41385036-41385151)
chr2 (16-102)||(2289285-2289371)
chr2 (188-250)||(19050009-19050071)
chr2 (228-286)||(21646535-21646592)
chr2 (36-102)||(35171380-35171446)
chr2 (195-284)||(28331279-28331368)
chr2 (172-272)||(40346719-40346820)
chr2 (172-283)||(13717178-13717289)
chr2 (172-285)||(14953022-14953137)
chr2 (172-286)||(23453341-23453457)
chr2 (215-286)||(5525330-5525401)
chr2 (215-286)||(6315884-6315955)
chr2 (172-250)||(18717883-18717962)
chr2 (19-102)||(27979901-27979984)
chr2 (19-102)||(28066431-28066514)
chr2 (215-290)||(33609219-33609294)
chr2 (172-261)||(1004776-1004865)
chr2 (204-270)||(19994952-19995018)
chr2 (204-270)||(35501413-35501479)
chr2 (245-299)||(42552037-42552091)
chr2 (196-265)||(23760619-23760687)
chr2 (16-101)||(28845587-28845672)
chr2 (215-252)||(36766744-36766781)
chr2 (66-106)||(214620-214660)
chr2 (42-86)||(2086672-2086716)
chr2 (228-288)||(7304377-7304436)
chr2 (139-183)||(11610348-11610392)
chr2 (215-274)||(29868240-29868300)
chr2 (198-286)||(31904251-31904338)
chr2 (195-251)||(33635545-33635601)
chr2 (215-283)||(41436325-41436393)
[»] chr1 (61 HSPs)
chr1 (17-97)||(1923373-1923453)
chr1 (172-285)||(13969100-13969214)
chr1 (34-103)||(36403103-36403172)
chr1 (16-102)||(28038333-28038420)
chr1 (16-93)||(19894825-19894902)
chr1 (189-286)||(33148150-33148247)
chr1 (196-286)||(40391244-40391333)
chr1 (16-102)||(45319476-45319562)
chr1 (172-281)||(46295872-46295982)
chr1 (34-102)||(10897660-10897729)
chr1 (215-288)||(49731207-49731280)
chr1 (204-273)||(50127382-50127451)
chr1 (16-99)||(4289893-4289976)
chr1 (195-270)||(11449073-11449148)
chr1 (16-106)||(6313585-6313675)
chr1 (204-286)||(15419685-15419766)
chr1 (39-104)||(33242458-33242524)
chr1 (16-98)||(45535758-45535840)
chr1 (16-106)||(48198956-48199046)
chr1 (16-106)||(48207539-48207629)
chr1 (16-102)||(51825960-51826046)
chr1 (16-102)||(52706389-52706475)
chr1 (195-271)||(2356403-2356478)
chr1 (34-102)||(9174906-9174974)
chr1 (34-102)||(9832736-9832803)
chr1 (173-287)||(33670765-33670880)
chr1 (16-103)||(25613101-25613188)
chr1 (219-286)||(27742551-27742617)
chr1 (225-280)||(33148902-33148957)
chr1 (36-102)||(43556710-43556777)
chr1 (204-271)||(44109105-44109172)
chr1 (195-286)||(48502563-48502654)
chr1 (195-265)||(19066878-19066948)
chr1 (195-265)||(19114768-19114838)
chr1 (16-102)||(29395537-29395623)
chr1 (220-286)||(31884510-31884575)
chr1 (16-97)||(26881820-26881901)
chr1 (16-104)||(28386555-28386644)
chr1 (144-286)||(30627588-30627731)
chr1 (172-283)||(8001748-8001860)
chr1 (16-103)||(9321617-9321705)
chr1 (247-287)||(12750288-12750328)
chr1 (166-288)||(18910398-18910522)
chr1 (260-303)||(27160391-27160435)
chr1 (195-251)||(31160758-31160814)
chr1 (195-286)||(36160565-36160654)
chr1 (198-270)||(39238844-39238916)
chr1 (137-260)||(48282857-48282981)
chr1 (195-270)||(13643588-13643662)
chr1 (188-283)||(26829492-26829587)
chr1 (171-257)||(32187079-32187166)
chr1 (166-258)||(33827819-33827913)
chr1 (166-258)||(33840052-33840146)
chr1 (24-102)||(20111681-20111759)
chr1 (16-106)||(49231993-49232083)
chr1 (16-102)||(51702603-51702689)
chr1 (66-107)||(1923090-1923131)
chr1 (65-102)||(14389472-14389509)
chr1 (216-272)||(34347556-34347612)
chr1 (218-286)||(38597477-38597545)
chr1 (169-272)||(50015773-50015877)
[»] chr3 (74 HSPs)
chr3 (19-102)||(24573432-24573515)
chr3 (16-106)||(44040896-44040986)
chr3 (22-102)||(35347089-35347169)
chr3 (172-285)||(4020096-4020210)
chr3 (166-274)||(15671112-15671221)
chr3 (16-101)||(34290167-34290252)
chr3 (34-99)||(43152049-43152114)
chr3 (16-104)||(36054007-36054095)
chr3 (172-270)||(29032425-29032524)
chr3 (136-286)||(44291196-44291345)
chr3 (16-104)||(2124702-2124790)
chr3 (34-101)||(27593965-27594033)
chr3 (167-285)||(4490779-4490896)
chr3 (16-103)||(30589846-30589933)
chr3 (16-99)||(45214086-45214169)
chr3 (17-99)||(14978546-14978628)
chr3 (204-270)||(20585818-20585884)
chr3 (16-102)||(24149836-24149922)
chr3 (195-273)||(35322019-35322096)
chr3 (196-286)||(35483592-35483682)
chr3 (204-286)||(42163641-42163722)
chr3 (16-104)||(26556868-26556956)
chr3 (16-108)||(36673253-36673345)
chr3 (17-102)||(36786921-36787006)
chr3 (195-286)||(45054384-45054475)
chr3 (172-285)||(1711925-1712039)
chr3 (172-285)||(28709567-28709681)
chr3 (16-106)||(52617082-52617172)
chr3 (16-101)||(23360578-23360663)
chr3 (16-101)||(23367418-23367503)
chr3 (190-283)||(55446733-55446825)
chr3 (225-285)||(2379659-2379719)
chr3 (30-102)||(26292563-26292635)
chr3 (37-102)||(28845650-28845717)
chr3 (166-257)||(29458060-29458152)
chr3 (215-283)||(37043031-37043099)
chr3 (204-272)||(43862952-43863020)
chr3 (215-283)||(48338813-48338881)
chr3 (172-286)||(635706-635821)
chr3 (195-285)||(6785819-6785910)
chr3 (16-106)||(10661196-10661287)
chr3 (222-296)||(31069612-31069687)
chr3 (30-101)||(38628820-38628891)
chr3 (16-99)||(46223308-46223391)
chr3 (188-262)||(8326159-8326232)
chr3 (169-286)||(11676734-11676852)
chr3 (203-285)||(22310571-22310652)
chr3 (204-286)||(27143997-27144078)
chr3 (16-102)||(31645363-31645449)
chr3 (16-102)||(45254554-45254640)
chr3 (65-106)||(26004843-26004884)
chr3 (198-271)||(54801358-54801431)
chr3 (220-283)||(2127400-2127461)
chr3 (30-106)||(35731870-35731946)
chr3 (221-285)||(40843060-40843124)
chr3 (172-283)||(44698218-44698330)
chr3 (221-289)||(45408719-45408787)
chr3 (188-272)||(50958871-50958955)
chr3 (172-270)||(14622107-14622206)
chr3 (16-99)||(20833907-20833990)
chr3 (195-286)||(26835722-26835813)
chr3 (215-282)||(31494050-31494117)
chr3 (231-286)||(32961178-32961233)
chr3 (183-282)||(36436585-36436684)
chr3 (16-104)||(50902415-50902507)
chr3 (16-102)||(11432556-11432642)
chr3 (195-284)||(26613090-26613180)
chr3 (32-98)||(33417082-33417148)
chr3 (220-298)||(36036183-36036260)
chr3 (18-100)||(46251201-46251282)
chr3 (204-265)||(17109569-17109630)
chr3 (220-289)||(17560702-17560771)
chr3 (195-302)||(34228283-34228390)
chr3 (24-84)||(44707954-44708014)
[»] chr7 (69 HSPs)
chr7 (166-271)||(11740356-11740462)
chr7 (198-288)||(37928295-37928385)
chr7 (195-270)||(45907059-45907134)
chr7 (16-107)||(46197099-46197190)
chr7 (188-286)||(16979939-16980037)
chr7 (16-102)||(30111794-30111880)
chr7 (216-285)||(11736212-11736281)
chr7 (16-104)||(152862-152950)
chr7 (38-106)||(32631550-32631618)
chr7 (34-101)||(39300426-39300494)
chr7 (195-286)||(7833769-7833860)
chr7 (195-290)||(33194715-33194810)
chr7 (16-98)||(27417651-27417733)
chr7 (16-102)||(34114540-34114626)
chr7 (16-98)||(42677250-42677332)
chr7 (16-106)||(47912519-47912609)
chr7 (215-286)||(23142697-23142769)
chr7 (16-104)||(28343319-28343407)
chr7 (172-286)||(1309725-1309840)
chr7 (190-265)||(34993148-34993223)
chr7 (16-102)||(12252385-12252471)
chr7 (221-290)||(16685724-16685794)
chr7 (221-290)||(17659960-17660030)
chr7 (16-106)||(23102300-23102390)
chr7 (16-102)||(33475538-33475624)
chr7 (231-288)||(22931919-22931976)
chr7 (34-106)||(31495340-31495413)
chr7 (135-288)||(8656289-8656445)
chr7 (190-270)||(8896618-8896698)
chr7 (218-286)||(24937829-24937896)
chr7 (36-84)||(41061223-41061271)
chr7 (34-94)||(47032339-47032399)
chr7 (16-104)||(510655-510745)
chr7 (16-107)||(30823596-30823687)
chr7 (172-286)||(39786453-39786568)
chr7 (166-288)||(41760334-41760457)
chr7 (204-270)||(1703908-1703974)
chr7 (196-266)||(8117470-8117540)
chr7 (215-265)||(23317843-23317893)
chr7 (16-101)||(29893965-29894051)
chr7 (16-102)||(43056687-43056773)
chr7 (16-102)||(48136361-48136447)
chr7 (220-285)||(3624274-3624339)
chr7 (54-99)||(11042523-11042568)
chr7 (16-100)||(12741382-12741467)
chr7 (16-101)||(18839303-18839388)
chr7 (196-265)||(41434719-41434788)
chr7 (190-270)||(8746149-8746229)
chr7 (133-242)||(11736096-11736208)
chr7 (190-258)||(18037870-18037938)
chr7 (204-272)||(22035743-22035811)
chr7 (188-272)||(25530563-25530647)
chr7 (218-286)||(26203067-26203135)
chr7 (206-286)||(36636044-36636123)
chr7 (17-61)||(40098256-40098300)
chr7 (169-283)||(12810145-12810260)
chr7 (16-106)||(29613899-29613990)
chr7 (215-290)||(31487755-31487830)
chr7 (16-86)||(35089112-35089182)
chr7 (34-100)||(36354653-36354718)
chr7 (216-286)||(47445402-47445472)
chr7 (166-270)||(19777931-19778036)
chr7 (16-106)||(39785105-39785197)
chr7 (220-304)||(47537404-47537488)
chr7 (34-83)||(48633691-48633740)
chr7 (16-104)||(7994165-7994253)
chr7 (215-283)||(30027964-30028032)
chr7 (66-106)||(32884818-32884858)
chr7 (218-278)||(46300678-46300738)
[»] chr4 (69 HSPs)
chr4 (21-102)||(16654187-16654268)
chr4 (165-273)||(31647731-31647840)
chr4 (16-104)||(53272848-53272936)
chr4 (16-106)||(42315883-42315973)
chr4 (34-104)||(54510579-54510649)
chr4 (196-273)||(19147174-19147251)
chr4 (42-98)||(10600643-10600699)
chr4 (172-286)||(27284069-27284184)
chr4 (200-271)||(54248993-54249064)
chr4 (34-104)||(47686840-47686910)
chr4 (172-280)||(12094961-12095070)
chr4 (195-290)||(16341127-16341222)
chr4 (195-290)||(20775065-20775160)
chr4 (30-101)||(44930624-44930695)
chr4 (16-102)||(7808999-7809085)
chr4 (195-289)||(16072336-16072430)
chr4 (16-106)||(27769073-27769163)
chr4 (16-101)||(23988206-23988291)
chr4 (218-286)||(51100074-51100143)
chr4 (16-101)||(52110261-52110345)
chr4 (204-288)||(17234032-17234116)
chr4 (216-304)||(22280318-22280406)
chr4 (169-264)||(31089783-31089878)
chr4 (16-104)||(38234612-38234700)
chr4 (198-265)||(2565439-2565506)
chr4 (34-106)||(5117834-5117908)
chr4 (215-270)||(19480550-19480605)
chr4 (196-263)||(31241978-31242045)
chr4 (16-102)||(7820950-7821036)
chr4 (16-94)||(8583008-8583086)
chr4 (16-102)||(32683134-32683220)
chr4 (16-106)||(48262084-48262174)
chr4 (65-102)||(388616-388653)
chr4 (195-303)||(16831126-16831234)
chr4 (65-102)||(28846169-28846206)
chr4 (16-100)||(32323078-32323163)
chr4 (218-286)||(34236177-34236246)
chr4 (232-304)||(35808568-35808640)
chr4 (204-265)||(38320153-38320214)
chr4 (217-286)||(52837314-52837383)
chr4 (16-96)||(3434832-3434912)
chr4 (195-287)||(37461791-37461882)
chr4 (190-270)||(41377214-41377294)
chr4 (218-286)||(53142778-53142846)
chr4 (215-270)||(2824861-2824916)
chr4 (195-286)||(2908236-2908326)
chr4 (16-106)||(5442402-5442490)
chr4 (188-285)||(30694284-30694378)
chr4 (221-280)||(36752703-36752762)
chr4 (198-285)||(39810731-39810817)
chr4 (219-286)||(48202482-48202549)
chr4 (195-286)||(50086657-50086748)
chr4 (198-283)||(32653879-32653965)
chr4 (198-264)||(37431810-37431876)
chr4 (39-101)||(42217448-42217510)
chr4 (195-257)||(42810390-42810452)
chr4 (16-102)||(54342156-54342242)
chr4 (220-290)||(18744889-18744961)
chr4 (172-288)||(22019598-22019715)
chr4 (195-257)||(27655330-27655394)
chr4 (218-251)||(32325056-32325089)
chr4 (166-270)||(40161029-40161134)
chr4 (204-257)||(49649922-49649975)
chr4 (16-84)||(49833989-49834058)
chr4 (195-271)||(51554361-51554437)
chr4 (16-84)||(29649147-29649215)
chr4 (203-271)||(31152166-31152233)
chr4 (220-291)||(44568693-44568764)
chr4 (16-104)||(50019200-50019288)
[»] chr5 (37 HSPs)
chr5 (134-287)||(14863333-14863486)
chr5 (204-287)||(21052662-21052744)
chr5 (16-104)||(11632683-11632771)
chr5 (166-286)||(2611143-2611264)
chr5 (220-286)||(7609590-7609655)
chr5 (137-286)||(8435054-8435204)
chr5 (34-102)||(6901355-6901423)
chr5 (172-286)||(6102826-6102940)
chr5 (198-289)||(11320121-11320210)
chr5 (172-270)||(11815924-11816023)
chr5 (16-103)||(13949799-13949886)
chr5 (30-93)||(18676939-18677002)
chr5 (16-102)||(40411418-40411505)
chr5 (204-286)||(1447588-1447670)
chr5 (16-101)||(10553439-10553524)
chr5 (16-97)||(10553737-10553818)
chr5 (16-101)||(13717104-13717189)
chr5 (16-106)||(13999209-13999300)
chr5 (195-286)||(30840623-30840713)
chr5 (16-102)||(2275269-2275354)
chr5 (216-262)||(14044726-14044772)
chr5 (195-285)||(16802026-16802115)
chr5 (172-285)||(22293982-22294096)
chr5 (216-285)||(28511195-28511265)
chr5 (172-241)||(30293824-30293894)
chr5 (45-95)||(40459306-40459356)
chr5 (34-102)||(6827951-6828020)
chr5 (228-285)||(14152530-14152587)
chr5 (30-102)||(26629511-26629583)
chr5 (172-287)||(36482048-36482163)
chr5 (16-106)||(40012812-40012903)
chr5 (220-286)||(7319255-7319321)
chr5 (196-262)||(35185277-35185342)
chr5 (165-261)||(16611529-16611626)
chr5 (188-288)||(1920764-1920864)
chr5 (19-102)||(4239579-4239663)
chr5 (195-286)||(42491636-42491728)
[»] scaffold0034 (1 HSPs)
scaffold0034 (138-286)||(22391-22539)
[»] scaffold0472 (1 HSPs)
scaffold0472 (16-104)||(935-1023)
[»] scaffold0237 (1 HSPs)
scaffold0237 (16-104)||(20444-20532)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-104)||(80790-80878)
[»] scaffold0153 (1 HSPs)
scaffold0153 (16-102)||(33824-33910)
[»] scaffold0117 (1 HSPs)
scaffold0117 (196-273)||(16856-16933)
[»] scaffold0079 (1 HSPs)
scaffold0079 (195-290)||(51639-51734)
[»] scaffold0299 (1 HSPs)
scaffold0299 (218-286)||(18064-18133)
[»] scaffold0042 (1 HSPs)
scaffold0042 (16-104)||(57167-57255)
[»] scaffold0045 (2 HSPs)
scaffold0045 (195-285)||(60453-60543)
scaffold0045 (195-285)||(67785-67875)
[»] scaffold0006 (1 HSPs)
scaffold0006 (204-262)||(38822-38880)
[»] scaffold1372 (1 HSPs)
scaffold1372 (218-267)||(1330-1379)
[»] scaffold0204 (1 HSPs)
scaffold0204 (169-285)||(15364-15481)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-100)||(36401-36486)
[»] scaffold0886 (1 HSPs)
scaffold0886 (198-262)||(1133-1197)
[»] scaffold0039 (1 HSPs)
scaffold0039 (171-286)||(29987-30103)
[»] scaffold0002 (1 HSPs)
scaffold0002 (172-283)||(120669-120781)
[»] scaffold0940 (1 HSPs)
scaffold0940 (16-102)||(3573-3659)
[»] scaffold0103 (1 HSPs)
scaffold0103 (169-250)||(28847-28929)
[»] scaffold0068 (1 HSPs)
scaffold0068 (195-265)||(52030-52100)
[»] scaffold0283 (1 HSPs)
scaffold0283 (190-258)||(3350-3418)


Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 34 - 304
Target Start/End: Complemental strand, 10008442 - 10008172
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccccttataatccgtaacaaatgagcattaaatt 133  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  10008442 aatcttttaaaatattctggactttgtttgccaaaatagtcttttaaaatctcaatccaatacacccccgttataatccgtaacaaatgagcactaaatt 10008343  T
Q  134 attaagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaa 233  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10008342 attaagggtcttgctaaccagtgtcctttgaacactgattaaggaatctaaaaaagaaattttgtcttaaaaatataaacggttacttttgatcaagtaa 10008243  T
Q  234 taattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtcttagggcactgtttaa 304  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10008242 taattacaccactttttaataaaaacttacttcttttggttgcttaaccaatgtcttagggcactgtttaa 10008172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 19418683 - 19418593
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||||||||||||||| ||||||||||| ||  |||| |||||| ||||||||||||||| |||||||||||||| || |||||||||    
T  19418683 ttgtcttaaaaatataaactgttacttttgaccagctaattattacatcactttttaataaaatcttacttcttttggatgcttaaccaat 19418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 5611130 - 5611244
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| |||||||| ||||||||   ||||||||| ||||| ||||||||| || |||| || |||||||||||||| ||||    
T  5611130 ttaaggaatctataaatagaaattttgtcttagaaatataagatgttacttttaatcaaataataattatacaacttattcataaaaacttacttgtttt 5611229  T
Q  271 ggttgtttaaccaat 285  Q
    || ||||||||||||    
T  5611230 ggatgtttaaccaat 5611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 35165659 - 35165731
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||||||| || ||| ||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  35165659 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccctcctta 35165731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 11102019 - 11101897
Alignment:
Q  165 acactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttac 263  Q
    |||||| |||||||||| ||||  |||||  || |||||||||||||||| |||||||||||  || |||| |||| || |||||||||||||| |||||    
T  11102019 acactggttaaggaatccaaaagtagaaaaattatcttaaaaatataaacagttacttttgactaactaattattaaactactttttaataaaatcttac 11101920  T
Q  264 ttcttttggttgtttaaccaatg 286  Q
     |||||| |||| ||||||||||    
T  11101919 ctcttttagttgcttaaccaatg 11101897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 10253053 - 10252964
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||| ||||||||||| |||| ||||||  || |||| |||||| || |||||||||||| ||||||||||||||||| |||||||||    
T  10253053 tgtcttgaaaatataaactgttatttttgactaactaattattacatcattttttaataaaatcttacttcttttggttgcttaaccaat 10252964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 29864837 - 29864749
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  29864837 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 29864749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 27082377 - 27082306
Alignment:
Q  217 tacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    ||||||||||||| |||| ||||||| ||||||| || |||| |||||| ||||||||||||||||||||||    
T  27082377 tacttttgatcaaataatcattacacaactttttcatgaaaatttacttgttttggttgtttaaccaatgtc 27082306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3109435 - 3109349
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||    
T  3109435 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 3109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 270
Target Start/End: Original strand, 17900713 - 17900845
Alignment:
Q  139 gggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataat 237  Q
    ||||||||||||||||||  |||  ||||| | |||||||||| ||||  |||||  |||||||  | ||||||||  ||||||||||  || |||| ||    
T  17900713 gggtcttgttaaccagtgcccctgaaacaccggttaaggaatccaaaagtagaaaaattgtcttggagatataaactcttacttttgactaactaattat 17900812  T
Q  238 tacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||||||||||| ||||| ||||||    
T  17900813 tacaccactttttaataaaatcttacctctttt 17900845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 26608878 - 26608998
Alignment:
Q  142 tcttgttaaccagtgttccttgaacactgattaaggaatctaaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattaca 241  Q
    ||||||||||||||| |||  | ||||   ||||||||||||||||  |||  ||||||| ||||||||||| |||||||||||  |  |||| ||||||    
T  26608878 tcttgttaaccagtgctccggggacacaagttaaggaatctaaaaataaaaagttgtcttgaaaatataaactgttacttttgactagctaattattaca 26608977  T
Q  242 ccactttttaataaaaactta 262  Q
     ||||||||||||||| ||||    
T  26608978 tcactttttaataaaatctta 26608998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 10262887 - 10262807
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||||||||||||||| ||||||||||||||    ||||  ||||| ||||||||||| ||||||||| || ||||||||||    
T  10262887 atcaatataatctcacaaagtcttttaaaatctt----atttgatttgctaaaatagtcttataaaatctcaattcaatacaccc 10262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 18493328 - 18493261
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||| ||||||||||  |||||||||||||||||||| ||||||  ||||||| ||||||||||||||    
T  18493328 tcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaaacttactt 18493261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 7104533 - 7104623
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||   |||||||||||||||||||    
T  7104533 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccccctta 7104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 8790097 - 8790007
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||   |||||||||||||||||||    
T  8790097 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccccctta 8790007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 6475828 - 6475743
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| || |||||||||||    
T  6475828 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaattcaatacacccc 6475743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 17506345 - 17506274
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaata--aaaacttacttcttttggt 273  Q
    |||||||||| || |||||| |||||||||||||||||  |||||||||||  |||| ||||||||||||||    
T  17506345 aaatataaactgtcactttttatcaagtaataattacattactttttaataaaaaaaattacttcttttggt 17506274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 21809802 - 21809898
Alignment:
Q  167 actgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    |||| ||||| |||||| ||| |||| | |||||||| |||||||||  || |||||| ||||||||||||||||   |||||||||||||||||||    
T  21809802 actggttaagaaatctataaatagaattgttgtcttagaaatataaattgtcactttttatcaagtaataattacgttactttttaataaaaactta 21809898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 31068429 - 31068517
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||    
T  31068429 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccct 31068517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 22297603 - 22297693
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||||  |||||||||||  || |||| |||||||||| |||||||||||  ||||||||||| | || ||||||||||    
T  22297603 ttgtcttgaaaatataaatcgttacttttgacaaactaattattacaccac-ttttaataaaattttacttcttttagctgcttaaccaatg 22297693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 4803235 - 4803165
Alignment:
Q  204 aaatataaacggttacttttg-atcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||||||| | |||||||  |||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  4803235 aaatataaactgctacttttttatcaagtaataattacattactttttagtaaaaatttacttcttttggt 4803165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 9213092 - 9213179
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaactta---cttcttttggttgtttaaccaatgtctt-agggcactgtttaa 304  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||   ||| ||||||||  |||||||||||||| |||||| |||||||    
T  9213092 ttttgatcaagtaataattacactacttttt-ataaaaagttactgcttgttttggtttcttaaccaatgtcttgagggcattgtttaa 9213179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 31896646 - 31896736
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | | |||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  31896646 atcaatacaatctcacacagtattttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 31896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 12677887 - 12677822
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaac 281  Q
    |||| ||||| |||||||| ||||||| |||||||| ||||||||||||| |||| |||| |||||    
T  12677887 ttacatttgaccaagtaatgattacactactttttattaaaaacttacttgttttagttgcttaac 12677822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 19659665 - 19659725
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaac 281  Q
    ||||||||| |||| ||||||| ||||||| |||||||||||||| |||| | ||||||||    
T  19659665 tttgatcaactaatgattacacaacttttttataaaaacttacttattttagatgtttaac 19659725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 32134158 - 32134030
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| |||| || | |||||||   |||| |||| |||||||||| ||||||| ||||||| |  ||||||||||| ||||    
T  32134158 ttaaggaatctacaaatagaaattttgttttgagaatataagatgttattttttatcaagtaatgattacacaactttttcaagaaaacttacttatttt 32134059  T
Q  271 ggttgtttaaccaatg-tcttagggcact 298  Q
     | || ||||||||||  |||||||||||    
T  32134058 agatgcttaaccaatgcccttagggcact 32134030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 2613370 - 2613448
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaa--taaaaacttact 264  Q
    |||||| |||||||||||||||||   | |||||||||||||||||||||| || ||| |||| |  ||||||||||||    
T  2613370 agaaattttgtcttaaaaatataagttgctacttttgatcaagtaataatttcatcacatttttatgtaaaaacttact 2613448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 17835022 - 17835092
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||||| |||||||||||| || | ||||| || ||||||| ||| |||||  |||||||||||||    
T  17835022 ttacttttgattaagtaataattatacgattttttcatgaaaacttgcttgttttgaatgtttaaccaatg 17835092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 32800293 - 32800183
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacacca-ctttttaataaaaacttacttcttttggttgtttaaccaatg-tcttag 292  Q
    |||||||||||||||||    | | ||||||| || ||||||||||||||  ||||| ||||||| ||||| |||||||||| ||||| ||||  || ||    
T  32800293 ttgtcttaaaaatataagttttgatttttgattaaataataattacaccattttttttataaaaaattactacttttggttgcttaacaaatgccctgag 32800194  T
Q  293 ggcactgttta 303  Q
    |||||||||||    
T  32800193 ggcactgttta 32800183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 27585270 - 27585205
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaa 81  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   ||||||||||||||||    
T  27585270 atcaataaaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaa 27585205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 8636789 - 8636845
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||||||||||| ||||||| ||||||  ||||||| || ||||||||||| |||||    
T  8636789 gttacttttgataaagtaatgattacataactttttcatgaaaacttacttattttg 8636845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 14261636 - 14261552
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||| |||||||||||||   |||||||||||||    
T  14261636 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcataatccaatacaccc 14261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 17345840 - 17345904
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagta 232  Q
    ||||||||||||| | ||| | |||| |||| |||||||||||||  ||||||||||||||||||    
T  17345840 tgattaaggaatcaacaaataaaaattttgttttaaaaatataaaatgttacttttgatcaagta 17345904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 30699823 - 30699887
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||| |||||||||||||||| || ||||| |||||||||| || ||||  |||||||| ||||    
T  30699823 tttgaccaagtaataattacacaacattttattaaaaacttatttgttttaattgtttaatcaat 30699887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 9209911 - 9209980
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatct 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9209911 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatct 9209980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 4302195 - 4302112
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||| | |||||||||||||||| |||| |||||||||||||    
T  4302195 tcaatataatctcacaaaatcttttaaaatctttagcattttattttctaaaatagtcttttaaattctcaatccaatacaccc 4302112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 37566588 - 37566518
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  37566588 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccccct 37566518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 30381889 - 30381822
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||| ||||||||||||||    
T  30381889 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 30381822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 7149035 - 7149125
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||||    
T  7149035 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccctta 7149125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 44648939 - 44649040
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| ||||||| ||||||||||  |||||||||||| ||||||| ||||||| ||||||| || |||||||| || ||||    
T  44648939 ttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttgataaagtaatgattacacaactttttcatgaaaacttatttgtttt 44649038  T
Q  271 gg 272  Q
    ||    
T  44649039 gg 44649040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 3137495 - 3137383
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg- 286  Q
    |||||| ||||||| ||||| |||   |||||||||||||||||||| ||||||| ||||||| ||| ||||||| || |||||| ||  |||||||||     
T  3137495 agaaattttgtcttgaaaatgtaagatgttacttttgatcaagtaattattacacaactttttcatataaacttatttgttttggatgcctaaccaatgt 3137396  T
Q  287 tcttagggcactg 299  Q
    |||||||||||||    
T  3137395 tcttagggcactg 3137383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 9458508 - 9458596
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  9458508 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 9458596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 20822008 - 20821908
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||||||||| |||||| | | |||| | ||||||||||||||||||  || |||||| || ||||||||||||||  |||||||||||||||||||||    
T  20822008 cactgattaagaaatctatagatagaattgttgtcttaaaaatataaattgtcactttttattaagtaataattacattactttttaataaaaacttact 20821909  T
Q  265 t 265  Q
    |    
T  20821908 t 20821908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 273
Target Start/End: Complemental strand, 29795663 - 29795515
Alignment:
Q  126 attaaattattaagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttg 224  Q
    |||||||| ||| ||||||| ||||||  ||| ||| |  || || |||||||||| ||||| |||| | || |||||||| ||||||| || ||||||     
T  29795663 attaaatttttatgggtcttattaaccgatgtccctggggcattggttaaggaatccaaaaatagaatttttatcttaaaactataaactgtcacttttt 29795564  T
Q  225 atcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    ||||| |||||||||||  ||||||||| ||||||||| ||||||||||    
T  29795563 atcaattaataattacattactttttaacaaaaacttaattcttttggt 29795515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 40264360 - 40264272
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  40264360 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 40264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 4656077 - 4656163
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||    
T  4656077 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 4656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 39065560 - 39065634
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||||||||| || |||||| ||||||||||||| |||  | ||||||||||||| |||||||||||    
T  39065560 tgtcttaaaaatataaactgtcactttttatcaagtaataatgacattattttttaataaaaatttacttctttt 39065634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 44655286 - 44655352
Alignment:
Q  222 ttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||| |||||||||||||||| |||||||| |||||||||| || |||||||||||||| |||||||    
T  44655286 ttgaccaagtaataattacactactttttattaaaaacttatttattttggttgtttaatcaatgtc 44655352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 9791885 - 9791961
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    ||||||| ||||||||||| | || |||||||||| |||| |||| | ||||||||||||||| |||||||||||||    
T  9791885 ttgtcttgaaaatataaactgctatttttgatcaactaattattatatcactttttaataaaatcttacttcttttg 9791961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 18200701 - 18200801
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtct 289  Q
    |||| |||||||||||||||||   |||||||||||| ||||||| ||||||| | ||||| |||||| ||||||| |||||| || ||||| ||| |||    
T  18200701 aaattttgtcttaaaaatataacatgttacttttgattaagtaatgattacacaattttttcataaaagcttacttattttggatgcttaacaaatatct 18200800  T
Q  290 t 290  Q
    |    
T  18200801 t 18200801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 28620685 - 28620772
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| |||| |||||||| |||||||||||| | |||||| |||||||||| | ||||| |||||||| || ||||||||||||||    
T  28620685 atcaatacaatcacacaaaattttttaaaatctttaagatttt-tttgccaaaacaatctttcaaaatctcaattcaatacacccccct 28620772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 10029230 - 10029155
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||||||||||||||| |||| || ||||||| ||||||| ||||||  ||||| || ||||||||||||||    
T  10029230 gttacttttgatcaagtaatgattatacaactttttcataaaaatttacttgatttggatgcttaaccaatgtctt 10029155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 32881206 - 32881111
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||| |||||||||||||||||    ||| |||| ||||||| || ||||||| || ||||| ||||||||||||| |||||| ||||||||||||    
T  32881206 aaattttgtcttaaaaatataagatattattttttatcaagttatgattacacaacattttattaaaaacttacttattttggatgtttaaccaat 32881111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 14781333 - 14781243
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  14781333 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 14781243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 30924212 - 30924281
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||||| ||||||||||||||| | |||||| |||||| |||||| |||||||||||| |||||||    
T  30924212 ttacttttgattaagtaataattacactatttttta-taaaaatttacttattttggttgtttgaccaatg 30924281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 43917675 - 43917585
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||| |||||||||   ||||||||| ||||| |||||||||||| | ||||| ||||||| |||||| |||||| || |||||||||    
T  43917675 ttgtcttgaaaatataaggcgttacttttaatcaaataataattacacaatttttttataaaaatttacttgttttggatgcttaaccaat 43917585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 1551608 - 1551507
Alignment:
Q  171 attaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttt 269  Q
    ||||||||||| ||||  |||||  |||||||  |||||||||  ||||||||||| ||| |||| || ||||||||||||||||||| ||||| |||||    
T  1551608 attaaggaatccaaaagtagaaaaattgtcttttaaatataaagtgttacttttgaccaactaattatgacaccactttttaataaaatcttacctcttt 1551509  T
Q  270 tg 271  Q
    ||    
T  1551508 tg 1551507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 10795460 - 10795379
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| ||||||||||    
T  10795460 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaataca 10795379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 14062493 - 14062574
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||| |||| |||||| ||||||||||||| |||||||||||||  ||||||| ||| ||||||||   ||||||||||    
T  14062493 atcaatagaatcacacaaagtcttttaaaatctgcaggattttgtttttcaaaataatctcttaaaatcctaatccaataca 14062574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 28462569 - 28462660
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||  ||||||||||  | |||||| || ||||||||||||||  |||||| |||||||||||||||| ||||| |||||||||||||||    
T  28462569 ttgtcttggaaatataaactatcactttttattaagtaataattacattactttt-aataaaaacttacttcatttgg-tgtttaaccaatgtc 28462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 37530004 - 37530073
Alignment:
Q  217 tacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||| | || ||||||| || ||||||||||||||||||  |||||||| ||||||||||||||    
T  37530004 tacttttgattatgttataattaaacaactttttaataaaaacttgtttcttttgattgtttaaccaatg 37530073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 24757081 - 24757165
Alignment:
Q  203 aaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    ||||||||||| |||||||||||  || |||| |||||| ||||||||||||||| ||||  |||||| | || |||||||||||    
T  24757081 aaaatataaactgttacttttgactaactaattattacatcactttttaataaaatcttatctcttttagctgcttaaccaatgt 24757165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 18131251 - 18131189
Alignment:
Q  223 tgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| ||||||||||||||| |||||| |||||||| |||||| ||||||||| ||||||||||    
T  18131251 tgattaagtaataattacactactttt-aataaaaagttacttgttttggttgcttaaccaatg 18131189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 30924897 - 30924842
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||| |||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  30924897 acttttcatcaagtaataattacattactttctaacaaaaacttacttcttttggt 30924842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 33621479 - 33621408
Alignment:
Q  171 attaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattaca 241  Q
    ||||||||||||| ||| | |||| ||||||||||||||||||   ||||||||||||||||||| ||||||    
T  33621479 attaaggaatctacaaataaaaattttgtcttaaaaatataaaattttacttttgatcaagtaattattaca 33621408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 286
Target Start/End: Original strand, 41675644 - 41675786
Alignment:
Q  144 ttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacac 242  Q
    ||||||||| ||| |||| |  ||| |||||||||||||| ||| |||| |  ||| || |||||||||||  | | |||| ||||||||||||||| |     
T  41675644 ttgttaaccggtgctcctggggcaccgattaaggaatctacaaatagaatttctgttttgaaaatataaactatcattttttatcaagtaataattatat 41675743  T
Q  243 cactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
      |||||||||||||| ||||||||||||| || ||||||||||    
T  41675744 ttctttttaataaaaatttacttcttttgg-tgcttaaccaatg 41675786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 900260 - 900349
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||| ||||| ||||| || | |||| || |||||||||||| |  ||||||||||||||||||||||  ||||| |||||||||||||    
T  900260 tgtcttgaaaatttaaactgtcattttttattaagtaataattatattactttttaataaaaacttactttatttgg-tgtttaaccaatg 900349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 11151037 - 11150920
Alignment:
Q  169 tgattaaggaatctaaaaaagaaatctt-gtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    ||||||||||||||| |||  |||| || |||||| ||||||||   ||||||||||||||| |||| |||||| || |||||  ||||||||||||| |    
T  11151037 tgattaaggaatctacaaataaaatttttgtcttagaaatataagatgttacttttgatcaaataatgattaca-caattttttttaaaaacttacttat 11150939  T
Q  268 tttggttgtttaaccaatg 286  Q
    ||||  || ||||||||||    
T  11150938 tttgaatgcttaaccaatg 11150920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 14110639 - 14110708
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||| |||||||||| || |||||| || ||||||||||||||  ||||||||||||||| ||||||    
T  14110639 ttgtcttagaaatataaaccgtcactttttat-aagtaataattacataactttttaataaaaatttactt 14110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 18957919 - 18957833
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  18957919 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 18957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 32498900 - 32498986
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  32498900 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 32498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 35901417 - 35901531
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| |||| || ||||| |||   ||||||||| || || |||| ||| ||| ||||||| |||||||||||||| ||||    
T  35901417 ttaaggaatctacaaatagaaattttgttttgaaaatgtaagatgttacttttaattaaataatgattgcacaactttttcataaaaacttacttgtttt 35901516  T
Q  271 ggttgtttaaccaat 285  Q
    || || |||||||||    
T  35901517 ggatgcttaaccaat 35901531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 43604460 - 43604382
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaat 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||    
T  43604460 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaat 43604382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 44724982 - 44724892
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   ||||||||||||| |||||    
T  44724982 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccctcctta 44724892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 18305162 - 18305073
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctt 105  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||| |||||||||||||   ||||||||||||||||||    
T  18305162 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccccctt 18305073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 37564868 - 37564779
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaata 254  Q
    ||||| |||||||||||||||  |||||  || ||||  |||||||  ||||||||||||| ||| |||| |||||||||||||||||||    
T  37564868 cactggttaaggaatctaaaagtagaaaaattatctttgaaatatatgcggttacttttgaccaattaattattacaccactttttaata 37564779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 39534164 - 39534241
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||| ||||||||||| || ||  || |||||||||||||||||  ||||||||||||||| |||| || ||||||    
T  39534164 tgtcttgaaaatataaactgtcaccctttatcaagtaataattacattactttttaataaaaatttacctcatttggt 39534241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 13907406 - 13907458
Alignment:
Q  236 attacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||||  ||||||||||| |||||||||||||  |||||||||||||||    
T  13907406 attacaccatcttttaataaaatcttacttcttttgactgtttaaccaatgtc 13907458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 34832426 - 34832302
Alignment:
Q  133 tattaagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagt 231  Q
    |||||| | |||||||||||||||   |  ||||||||||||| ||||||||||  |||||  || | ||  |||||||||  |||||||||||  || |    
T  34832426 tattaaagttcttgttaaccagtgcctcgagaacactgattaaagaatctaaaagtagaaaaattattttggaaatataaattgttacttttgactaact 34832327  T
Q  232 aataattacaccactttttaataaa 256  Q
    ||| |||||||||||||||||||||    
T  34832326 aattattacaccactttttaataaa 34832302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 20542499 - 20542384
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| | |||||  ||||||||   |||||||||||| ||||||| |||||||   |||||  ||||||||||||  ||||    
T  20542499 ttaaggaatctacaaatagaaatttcgtcttggaaatataagatgttacttttgattaagtaatgattacacacttttttcttaaaaacttactcgtttt 20542400  T
Q  271 ggttgtttaaccaatg 286  Q
    || || ||||||||||    
T  20542399 ggatgcttaaccaatg 20542384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 40489961 - 40489850
Alignment:
Q  172 ttaaggaatctaaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||||||||||| || | |||| ||| |||  |||||||||  |||||| ||||| ||||||| ||||||  ||||||| ||||||||||| || ||||     
T  40489961 ttaaggaatctacaataaaaattttgccttgtaaatataaaatgttactattgataaagtaatgattacataactttttcataaaaacttatttgtttta 40489862  T
Q  272 gttgtttaacca 283  Q
    | | ||||||||    
T  40489861 gatatttaacca 40489850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 42275945 - 42276024
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaata 95  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| ||| ||||    
T  42275945 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatctaata 42276024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 1605870 - 1605804
Alignment:
Q  31 caaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    |||| |||||||||||||||| |||||| | |  ||||| ||| |||||||||||| ||||||||||    
T  1605870 caaagtcttttaaaatcttcaagattttttctatcaaaacagtattttaaaatctcaatccaataca 1605804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 3670593 - 3670555
Alignment:
Q  232 aataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  3670593 aataattacacaactttttaataaaaacttacttatttt 3670555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 13461963 - 13462017
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||||||| ||||||  ||||||| |||||||| ||||||||||||| ||||    
T  13461963 ttacttttgataaagtaacgattacacaactttttattaaaaacttacttatttt 13462017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 34678232 - 34678278
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattaca 241  Q
    ||||||| ||||| ||||  |||||||||||||||||||||||||||    
T  34678232 ttgtcttgaaaatgtaaaatgttacttttgatcaagtaataattaca 34678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 35762369 - 35762316
Alignment:
Q  203 aaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaa 257  Q
    ||||||||||| |||| ||||||| || |||| ||||||||||||||||||||||    
T  35762369 aaaatataaactgtta-ttttgattaattaattattacaccactttttaataaaa 35762316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 37919479 - 37919417
Alignment:
Q  203 aaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||||||| || | |||| || ||||||||||||||  ||||||||||||||| ||||||    
T  37919479 aaaatataaactgtcattttttattaagtaataattacattactttttaataaaaatttactt 37919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 38388602 - 38388536
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||||||  ||||||||||  || |||| |||||| ||||||||||||||| ||||| ||||||    
T  38388602 aaatataaactattacttttgactaactaattattacatcactttttaataaaatcttacctctttt 38388536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 5266826 - 5266793
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatctt 49  Q
    ||||||||||||||||||| ||||||||||||||    
T  5266826 atcaatataatctcacaaagtcttttaaaatctt 5266793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 10451964 - 10451895
Alignment:
Q  218 acttttgatcaagtaataa-ttacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| ||||||||| |||||||| ||||||  ||||| |||||| |||| |||| ||||||||||    
T  10451964 acttttgattaagtaataatttacaccattttttataaaaaaattacttgttttagttgcttaaccaatg 10451895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 12201892 - 12201835
Alignment:
Q  183 aaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattac 240  Q
    |||| |||||| |||||||  |||||||| | |||||||||||||||||| |||||||    
T  12201892 aaaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12201835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 12446320 - 12446263
Alignment:
Q  183 aaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattac 240  Q
    |||| |||||| |||||||  |||||||| | |||||||||||||||||| |||||||    
T  12446320 aaaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12446263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 19781429 - 19781478
Alignment:
Q  237 ttacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||||||||  ||||| |||||| ||||||||| ||||||||||    
T  19781429 ttacaccactttttataaaaaaattacttgttttggttgcttaaccaatg 19781478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 23797545 - 23797606
Alignment:
Q  222 ttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||| |||||||||||| || ||||||| | |||||| |||||| |||| ||||||||||||    
T  23797545 ttgaccaagtaataatttcatcacttttcattaaaaatttacttgttttagttgtttaacca 23797606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 27162881 - 27162828
Alignment:
Q  237 ttacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||| ||||||| |||||||||| ||| |||||| || ||||||||||||||    
T  27162881 ttacacaacttttttataaaaacttgcttgttttggatgcttaaccaatgtctt 27162828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 39466719 - 39466634
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||| ||||| | |||||||||||||| | || ||| |||   |||||| |||||||||||||  ||||||||||||||    
T  39466719 atcaatacaatatcacagagtcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcttaatccaatacacccc 39466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 41385906 - 41385869
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  41385906 caaaacagtcttttaaaatctcaatccaatacaccccc 41385869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 600440 - 600372
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||||||||||| ||||||| ||| ||| ||||||| || |||||||| || |||| | ||||||||||    
T  600440 gttacttttgataaagtaatgattgcacaactttttcatgaaaacttatttgttttagatgtttaacca 600372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 10128278 - 10128350
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||| ||||||||||| | || ||| ||   ||||||| ||||||||| |||| |||||||||||||||    
T  10128278 acaaaatcatttaaaatcttgaagacttttttaatcaaaataatcttttaaattctcaatccaatacaccccc 10128350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 17791619 - 17791651
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaataca 97  Q
    |||||||||||||||||||||| ||||||||||    
T  17791619 caaaatagtcttttaaaatctcaatccaataca 17791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 23725669 - 23725741
Alignment:
Q  214 ggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| |||  |||||| || |||| ||||||| || ||||||||||| |||||| || ||||||||||    
T  23725669 ggttactttcgattgagtaatgatcacacaactttttcatgaaaacttacttgttttggatgcttaaccaatg 23725741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 38805961 - 38805929
Alignment:
Q  64 ccaaaatagtcttttaaaatctcgatccaatac 96  Q
    ||||||||||||||||||||||| |||||||||    
T  38805961 ccaaaatagtcttttaaaatctcaatccaatac 38805929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 39209398 - 39209479
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||||| || |||||| || || ||||||| ||| |||||||||||||||| ||||||| ||||| || ||||||||||||    
T  39209398 aaatataaactgtcactttt-attaaataataat-acatcactttttaataaaaatttacttcgtttgg-tgcttaaccaatgtc 39209479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 42366947 - 42366983
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  42366947 caaaatagtcatttaaaatctcaatccaatacacccc 42366983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 38821336 - 38821248
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || |||||||| |||||    
T  38821336 atcaatataatctcacaaaatcttttaaaatcttcagaattttgtttgccaaaataatcttttaaaatctcaattcaatacacgcccct 38821248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 34027861 - 34027781
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||    
T  34027861 tcaatataatctcacaaaatcctttaaaatcttcaagattttgtttgccaaaataatattttaaaatctcaatccaataca 34027781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 12135553 - 12135627
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccccttata 108  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  12135553 aatcttttaaaatcttcatgattttttttgccaaaatagtctttcaaaatctcaatccaatacaccctccttata 12135627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 27896580 - 27896463
Alignment:
Q  167 actgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||||||| ||| || || |||||  |||| ||| |||||||| | ||||||||||||  |||||||||||||| |||||||||| |||||||||||    
T  27896580 actgattaaggtatccaagaatagaaaatttgttttagaaatataagctgttacttttgatttagtaataattacacaactttttaattaaaacttactt 27896481  T
Q  266 cttttggttgtttaacca 283  Q
     |||||||||||||||||    
T  27896480 attttggttgtttaacca 27896463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 43131806 - 43131875
Alignment:
Q  217 tacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||| |||||||||||||| |||||    
T  43131806 tacttttgatcaagtaataattacactacctttttataaaaacttacttgttttggttgtttaatcaatg 43131875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 4978777 - 4978869
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| || |||| ||||||||||| || |||||| ||||||||||||||    
T  4978777 ttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaaccaatgt 4978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 4996685 - 4996777
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| || |||| ||||||||||| || |||||| ||||||||||||||    
T  4996685 ttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatgtttaaccaatgt 4996777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 24935358 - 24935286
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||||||| || ||| ||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  24935358 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccctcctta 24935286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 25684051 - 25683979
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||||||| || ||| ||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  25684051 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatccaatacaccctcctta 25683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 11535693 - 11535761
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||| || ||||||||||||    
T  11535693 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaattcaatacaccccc 11535761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 29941890 - 29941978
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  29941890 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 29941978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 43248789 - 43248714
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||| |||||||||| ||||||||||| ||| |||| ||||||||| ||||| |||||| ||||||||||||    
T  43248789 ttgtcttagaaatataaactgttacttttgaccaactaattattacaccaatttttgataaaatcttacttctttt 43248714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 25289164 - 25289254
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  25289164 atcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 25289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 45547916 - 45548002
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||    
T  45547916 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 45548002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 37913032 - 37913105
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||| ||||||||||| || |||||| ||||||||||||| |||  | ||||||||||||||||||||||||||    
T  37913032 tcttgaaaatataaaccgtcactttttatcaagtaataatcacattaatttttaataaaaacttacttcttttg 37913105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 143952 - 143876
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||||||  |||||||||  ||||||||| |||||||||| |||| |||| |||||||||||| |||||||||||||    
T  143952 ttgtcttccaaatataaattgttacttttaatcaagtaattattataccaatttttaataaaatcttacttcttttg 143876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 7487042 - 7486954
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  |||||  ||||||||||||||| |||||||||||||||||    
T  7487042 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacggtcttttaaaatctcaatccaatacacccccct 7486954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 19606305 - 19606389
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||| ||||| ||| || | |  ||||||||||||    
T  19606305 aaatataaactgttacttttgatgaactaattattacaccactttttaataaaatcttacatctcttagcttcttaaccaatgtc 19606389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 24192730 - 24192662
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||||||||  | ||| |||  |||||||||||||||||||||| |||||||||||||||    
T  24192730 aatcttttaaaatcttcaaaactttttttatcaaaatagtcttttaaaatctcaatccaatacaccccc 24192662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 13738396 - 13738510
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| | |||| |||| || |||||||||   ||||||| |||| ||||||| ||||||| | ||||| |||||||||||||| ||||    
T  13738396 ttaaggaatctataaataaaaattttgttttgaaaatataagatgttacttctgataaagtaatgattacacaatttttttataaaaacttacttgtttt 13738495  T
Q  271 ggttgtttaaccaat 285  Q
    || || |||||||||    
T  13738496 ggatgcttaaccaat 13738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 36622191 - 36622101
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||||| ||||||||||  ||||||||||  || |||| ||||||| |||||||||||||| ||||| |||||| |||  |||||||||    
T  36622191 ttgtcttagaaatataaactattacttttgactaactaattattacacaactttttaataaaatcttacctcttttagttacttaaccaat 36622101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 40574138 - 40574256
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||| |||||||||||| ||| |||||| |||||||  |||||||||  || |||||||||  |||||||||||||| ||||||| || ||||  ||||    
T  40574138 cactggttaaggaatctacaaatagaaattttgtcttggaaatataaaatgtaacttttgatagagtaataattacacaactttttcatgaaaatgtact 40574237  T
Q  265 tcttttggttgtttaacca 283  Q
    | |||||| || |||||||    
T  40574238 tgttttggatgcttaacca 40574256  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 30046604 - 30046669
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    |||||||||||||||||| || ||| ||| |||||||||||||| ||||| || ||||||||||||    
T  30046604 aatcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatccaatacacc 30046669  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 30137648 - 30137713
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    |||||||||||||||||| || ||| ||| |||||||||||||| ||||| || ||||||||||||    
T  30137648 aatcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatccaatacacc 30137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 18178281 - 18178369
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||    
T  18178281 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccct 18178369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20156665 - 20156621
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtt 61  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  20156665 tcaatataatctcacaaaatcttttaaaatcttcaaaattttgtt 20156621  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 26789794 - 26789882
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||    
T  26789794 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccct 26789882  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 1870519 - 1870609
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||| |  | ||||||||| |||||||||||||| || ||||| ||||||| |||||| |||| |||| ||||||||||    
T  1870519 ttgtcttgaaaatataagctttgacttttgattaagtaataattaca-catttttttataaaaagttacttgtttttgttgcttaaccaatg 1870609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 41385151 - 41385036
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| ||||| |||||  |||| ||  |||||||||  ||||||||||| ||| |||| || ||||||||||| |||||||  |||||||||||    
T  41385151 ttaaggaatccaaaaatagaaaaattgtattggaaatataaattgttacttttgaccaactaattatcacaccacttttcaataaaatattacttctttt 41385052  T
Q  271 ggttgtttaaccaatg 286  Q
     | || ||||||||||    
T  41385051 agctgcttaaccaatg 41385036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 2289285 - 2289371
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| |||| |||||| |||||||||||||| | |||| | ||| | |||| | |||||||||||| | |||||||||||||||    
T  2289285 atcaatacaatcacacaaagtcttttaaaatctttaagattcttttttctaaaacaatcttttaaaatcccaatccaatacaccccc 2289371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 19050009 - 19050071
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttt 250  Q
    |||||| ||||| || |||||||||   ||| |||||||||||||||||||||||||||||||    
T  19050009 agaaattttgtcatagaaatataaaatattatttttgatcaagtaataattacaccacttttt 19050071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 21646535 - 21646592
Alignment:
Q  228 aagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||||||||  |||||||||| |||||||||||| ||||| |||||||||||||    
T  21646535 aagtaataattacattactttttaatgaaaacttacttcatttgg-tgtttaaccaatg 21646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 35171446 - 35171380
Alignment:
Q  36 tcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||| ||||||||    
T  35171446 tcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaacacaccccc 35171380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 28331279 - 28331368
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaa 284  Q
    |||||||  |||||||||   ||| ||||||||||||||| ||||||| ||| ||| |||||||||||||| |||||  || ||||||||    
T  28331279 ttgtcttggaaatataaaatattatttttgatcaagtaatgattacacaactctttcataaaaacttacttattttgaatgcttaaccaa 28331368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 40346820 - 40346719
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| | | |||||| |||| || |||||||||   |||| |||||||||| |||| ||| ||| ||||||| |||||||||||||| ||||    
T  40346820 ttaaggaatctacatatagaaattttgtattgaaaatataagatgttatttttgatcaaataatgattgcacaactttttcataaaaacttacttatttt 40346721  T
Q  271 gg 272  Q
    ||    
T  40346720 gg 40346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 13717289 - 13717178
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||||| || ||| |||||| ||||||| ||||||||||  |||| |||| || ||||||||||||||  ||||||| || ||||||||||| ||||    
T  13717289 ttaaggaatatacaaatagaaattttgtcttgaaaatataaaatgttatttttaat-aagtaataattacataactttttgatgaaaacttacttatttt 13717191  T
Q  271 ggttgtttaacca 283  Q
     | || |||||||    
T  13717190 agatgcttaacca 13717178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 285
Target Start/End: Complemental strand, 14953137 - 14953022
Alignment:
Q  172 ttaaggaatcta--aaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttt 269  Q
    ||||||||||||  ||| | |||| ||||||||||||||||||  |||| |||||||| |||||| |||| || | |||||  || ||| |||||| |||    
T  14953137 ttaaggaatctacgaaataaaaattttgtcttaaaaatataaaatgttatttttgatcgagtaatgattagacaatttttttttacaaatttacttattt 14953038  T
Q  270 tggttgtttaaccaat 285  Q
    ||| || |||||||||    
T  14953037 tggatgcttaaccaat 14953022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 23453457 - 23453341
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttt-aataaaaacttacttcttt 269  Q
    |||||||||||| ||| | |||| ||||||| |||||||||   ||||||||||||||| |||  ||||||| |||||||  |||||||||| ||| |||    
T  23453457 ttaaggaatctacaaataaaaattttgtcttgaaaatataagatgttacttttgatcaaataaagattacacaactttttccataaaaacttgcttgttt 23453358  T
Q  270 tggttgtttaaccaatg 286  Q
    ||| |  ||||||||||    
T  23453357 tggatacttaaccaatg 23453341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 5525330 - 5525401
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||| ||||| ||| |||| |||| || |||||||| ||||||||||||| |||| |||| ||||||||||    
T  5525330 gttacatttgaccaaataatgattatactactttttattaaaaacttacttattttagttgcttaaccaatg 5525401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 6315955 - 6315884
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| ||||||||||||||| ||||||| | ||||| | ||||| ||| || |||||| |||||||||||||    
T  6315955 gttatttttgatcaagtaatgattacacaatttttttacaaaaatttatttgttttggatgtttaaccaatg 6315884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 18717962 - 18717883
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttt 250  Q
    ||||||||| || ||| |||||| || | ||||||||||||   |||||||||||||||||||| ||||||| |||||||    
T  18717962 ttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaacttttt 18717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 27979901 - 27979984
Alignment:
Q  19 aatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||| |||| |||||| |||||||||||||| | |||| | |||| ||||| | ||||| |||||||| |||||||||| ||||    
T  27979901 aatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaatacatcccc 27979984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 28066431 - 28066514
Alignment:
Q  19 aatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||| |||| |||||| |||||||||||||| | |||| | |||| ||||| | ||||| |||||||| |||||||||| ||||    
T  28066431 aatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaatacatcccc 28066514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 33609219 - 33609294
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    ||||| ||||||||| |||||| ||||| | |||||| |||||||||| || ||||  ||| ||||||||||||||    
T  33609219 gttacatttgatcaaataataagtacactattttttattaaaaacttatttattttaattgcttaaccaatgtctt 33609294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 1004776 - 1004865
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactt 261  Q
    |||||||||||| ||| |||||| ||||||| ||||||||||   ||||||||||| || | || ||||||| ||||||| ||||||||||    
T  1004776 ttaaggaatctacaaatagaaattttgtcttgaaaatataaaatattacttttgat-aaattatgattacacaactttttcataaaaactt 1004865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 19994952 - 19995018
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| |||||||||||  || |||| |||||| ||||||||||||||  ||||| ||||||    
T  19994952 aaatataaactgttacttttgactaactaattattacatcactttttaataaatgcttacctctttt 19995018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 35501479 - 35501413
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||||||  ||| ||||||  || |||| |||||| ||||||||||||||| ||||||||||||    
T  35501479 aaatataaacttttatttttgactaactaattattacatcactttttaataaaatcttacttctttt 35501413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 42552037 - 42552091
Alignment:
Q  245 ctttttaataaaaacttacttcttttggttgtttaaccaatgtcttagggcactg 299  Q
    |||||| |||||||||||||| |||||  ||||||||||||||| | ||||||||    
T  42552037 ctttttcataaaaacttacttgttttgtatgtttaaccaatgtcattgggcactg 42552091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 23760619 - 23760687
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||||||||||||||  ||| |||| |||||||||||||||||  |||||||||  |||| ||||||    
T  23760619 tgtcttaaaaatataaactcttattttt-atcaagtaataattacattactttttaaataaaatttactt 23760687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 28845587 - 28845672
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||||||| | ||||| |||||||| | || ||| |||   |||||||||||||||||||   ||||||||||||||    
T  28845587 atcaatacaatctcacatagtctttaaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 28845672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 36766744 - 36766781
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaa 252  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  36766744 gttacttttgatcaagtaatatttataccactttttaa 36766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 214660 - 214620
Alignment:
Q  66 aaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  214660 aaaatagtcttttaaaatcctaatccaatacacccccctta 214620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 2086672 - 2086716
Alignment:
Q  42 aaaatcttcaggattttgtttgccaaaatagtcttttaaaatctc 86  Q
    ||||||||||| ||||| ||| | |||||||||||||||||||||    
T  2086672 aaaatcttcagaattttatttactaaaatagtcttttaaaatctc 2086716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 7304377 - 7304436
Alignment:
Q  228 aagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    ||||||||||||||| || |||| |||||| |||| || |||| |||||||||||||||||    
T  7304377 aagtaataattacactacgtttttataaaatcttatttgtttt-gttgtttaaccaatgtc 7304436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 11610348 - 11610392
Alignment:
Q  139 gggtcttgttaaccagtgttccttgaacactgattaaggaatcta 183  Q
    |||||||||||||| |||||||  || ||||||||||||||||||    
T  11610348 gggtcttgttaaccggtgttcccggagcactgattaaggaatcta 11610392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 29868300 - 29868240
Alignment:
Q  215 gttacttttgatcaagtaataattacaccacttt-ttaataaaaacttacttcttttggtt 274  Q
    ||||||||| ||||| ||||||||||| |||||| || ||||||||||||||  |||||||    
T  29868300 gttactttttatcaaataataattacatcactttctttataaaaacttacttggtttggtt 29868240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 31904251 - 31904338
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||||||||  |||| |||| |||||||||| ||||||| | ||||| || |||| |||||| |||| | || ||||||||||    
T  31904251 tcttaaaaatataaaatgttatttttaatcaagtaatgattacacaattttttcat-aaaatttacttattttagatgattaaccaatg 31904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 33635601 - 33635545
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttta 251  Q
    ||||||| ||||||||||   | ||||||||| |||||||||||||| |||||||||    
T  33635601 ttgtcttgaaaatataaattttgacttttgattaagtaataattacatcacttttta 33635545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 41436393 - 41436325
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||| ||||||| || |||| ||||||| ||||||| || ||||||||||| |||||| || |||||||    
T  41436393 gttatttttgataaaataatgattacacaactttttcatgaaaacttacttgttttggatgcttaacca 41436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 1923453 - 1923373
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  1923453 tcaatataatctcacaaaatcttttaaaatcttcaagattttgtttgccaaaataatcttttaaaatctcaatccaataca 1923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 13969100 - 13969214
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| ||||||| ||||||||||  ||||||||| || ||||||| ||||||| | ||||| |||||||||||||| ||||    
T  13969100 ttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaaacttacttgtttt 13969199  T
Q  271 ggttgtttaaccaat 285  Q
    ||||| |||||||||    
T  13969200 ggttgcttaaccaat 13969214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 36403103 - 36403172
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccc 103  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  36403103 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccccc 36403172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 28038420 - 28038333
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtc-ttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||| ||||||| |||||||||||||  || |||||||||||||||||| || |||||||||||| || ||||||||||||    
T  28038420 atcaatataatttcacaaagtcttttaaaatctgtagaattttgtttgccaaaataatctttttaaaatctcaattcaatacaccccc 28038333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 19894825 - 19894902
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaa 93  Q
    |||||||||||| ||||||||||||||||||||| | |||| | ||||||||||||| ||||||||||| | ||||||    
T  19894825 atcaatataatcacacaaaatcttttaaaatctttaagattctttttgccaaaatagacttttaaaatcccaatccaa 19894902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 33148150 - 33148247
Alignment:
Q  189 gaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||| |||||||||||||||||   | |||||||||||||||||| ||||||| | ||||| |||||||||||||| |||||  |||||||| ||||    
T  33148150 gaaattttgtcttaaaaatataagatgctacttttgatcaagtaatgattacacaattttttcataaaaacttacttgttttgaatgtttaacaaatg 33148247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 40391244 - 40391333
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||| ||||||||||| || |||||| |||||||||||||||||  ||||||| ||||||||| ||||| ||||| || ||||||||||    
T  40391244 tgtcttgaaaatataaactgtcactttttatcaagtaataattacattactttttgataaaaactcacttcatttgg-tgcttaaccaatg 40391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 45319476 - 45319562
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||    
T  45319476 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 45319562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 46295872 - 46295982
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| | |||| || |||| ||||||||||  |||||||||||||||||||| || |||| ||||||| ||||||||||| || ||||    
T  46295872 ttaaggaatctacaaataaaaattttatcttgaaaatataaaatgttacttttgatcaagtaatcatgacacaactttttcataaaaacttatttgtttt 46295971  T
Q  271 ggttgtttaac 281  Q
    || || |||||    
T  46295972 ggatgcttaac 46295982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 10897660 - 10897729
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgc-caaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||| || ||| ||| | |||||||||||||||||||||| |||||||||||||||    
T  10897660 aatcttttaaaatcttcaagacttttttttctcaaaatagtcttttaaaatctcaatccaatacaccccc 10897729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 49731207 - 49731280
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    ||||| ||||| ||| ||||||||| || |||||||| ||||||||||||| |||| |||||||||||||||||    
T  49731207 gttacatttgaccaaataataattatactactttttattaaaaacttacttgttttagttgtttaaccaatgtc 49731280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 50127382 - 50127451
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||||||| || | |||| ||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  50127382 aaatataaactgtcattttttatcgagtaataattacattactttttaataaaaacttacttcttttggt 50127451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 4289893 - 4289976
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    ||||||| |||  |||||| ||||||||||| | ||||||||||||| |||||||| ||| |||||||| | ||||||||||||    
T  4289893 atcaatagaattacacaaagtcttttaaaatatacaggattttgttttccaaaataatctcttaaaatcccaatccaatacacc 4289976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 11449148 - 11449073
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||||||||   |||| ||||||||| ||||||||||||  ||||||| |||||||||||||| ||||    
T  11449148 ttgtcttaaaaatataatatgttaattttgatcatgtaataattacataactttttcataaaaacttacttatttt 11449073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 6313585 - 6313675
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  6313585 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 6313675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 15419685 - 15419766
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||  ||||| |||||||||||||    
T  15419685 aaatataaactgttactttttattaagtaataattatattactttttaataaaaatttactttatttgg-tgtttaaccaatg 15419766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 33242524 - 33242458
Alignment:
Q  39 tttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||||||||| || |||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  33242524 tttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatgcaatacacccccct 33242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 45535758 - 45535840
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacac 98  Q
    ||||||| ||||  |||||||||| ||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||    
T  45535758 atcaatacaatccaacaaaatcttctaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacac 45535840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 48198956 - 48199046
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||   |||||||||||||||||||    
T  48198956 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccccctta 48199046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 48207539 - 48207629
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||   |||||||||||||||||||    
T  48207539 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccccctta 48207629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 51826046 - 51825960
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| |||||||||| | ||||| ||| |||| |||||||||| ||||    
T  51826046 atcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaactctcaatccaatacaacccc 51825960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 52706389 - 52706475
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | |||||||||||||| |||||||||||||||    
T  52706389 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaatccaatacaccccc 52706475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 2356403 - 2356478
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    ||||||||||||||||||  |||| |||||| ||| ||||| |||||| |||||| ||||||| |||||||||||||    
T  2356403 ttgtcttaaaaatataaattgttatttttgaccaactaata-ttacacaacttttaaataaaatcttacttcttttg 2356478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 9174906 - 9174974
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||| || ||| ||||  ||||||||||||||||||||| ||| |||||| ||||    
T  9174906 aatcttttaaaatcttcaagactttttttgttaaaatagtcttttaaaatctcaatcaaatacatcccc 9174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 9832736 - 9832803
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||| || ||| |||| |||| ||||||||||||||||| ||| |||||||||||    
T  9832736 aatcttttaaaatcttcaagactttttttgtcaaa-tagtcttttaaaatctcaatctaatacaccccc 9832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 33670765 - 33670880
Alignment:
Q  173 taaggaatctaaaaaagaaatctt-gtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactt-acttctttt 270  Q
    |||||||||||||||  |||| || || ||| ||||||||| | || |||||||| ||||||| |||||||||| ||||||| |||| || |||||||||    
T  33670765 taaggaatctaaaaataaaatttttgtattataaatataaatgttt-cttttgattaagtaattattacaccaccttttaattaaaattttacttctttt 33670863  T
Q  271 ggttgtttaaccaatgt 287  Q
    | ||| |||||||||||    
T  33670864 gattgcttaaccaatgt 33670880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 25613101 - 25613188
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccc 103  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   ||||||||||||||||    
T  25613101 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccc 25613188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 27742617 - 27742551
Alignment:
Q  219 cttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||| || ||||||||||||||  ||||||||||||||| ||||||||||| |||| ||||||||||    
T  27742617 ctttttattaagtaataattacattactttttaataaaaaattacttctttt-gttgcttaaccaatg 27742551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 33148957 - 33148902
Alignment:
Q  225 atcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaa 280  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||| |||| ||||    
T  33148957 atcaagtaataattacactactttttattaaaaacttacttattttagttgcttaa 33148902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 43556710 - 43556777
Alignment:
Q  36 tcttttaaaatcttcag-gattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||||| | |||||| |||||||||||||||||| | |||||| |||||||||| ||||    
T  43556710 tcttttaaaatcttctgagattttatttgccaaaatagtctttcacaatctcaatccaatacatcccc 43556777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 44109105 - 44109172
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||||||||| ||  ||||| || ||||||||||||||  ||||||||||||||||||||||| ||||    
T  44109105 aaatataaactgtccctttttattaagtaataattacattactttttaataaaaacttacttcatttg 44109172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 48502654 - 48502563
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||| | |||||||||||  || |||| ||||||| ||||||||||||||  |||| ||||| ||||  ||||||||||    
T  48502654 ttgtcttgaaaatataagctgttacttttgactaactaattattacacaactttttaataaaattttacctctttaggttacttaaccaatg 48502563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 19066948 - 19066878
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||| |||||||||  || |||||| | |||||||||||||||  ||||||||||||||| ||||||    
T  19066948 ttgtcttagaaatataaattgtcactttttaccaagtaataattacaatactttttaataaaaatttactt 19066878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 19114838 - 19114768
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||| |||||||||  || |||||| | |||||||||||||||  ||||||||||||||| ||||||    
T  19114838 ttgtcttagaaatataaattgtcactttttaccaagtaataattacaatactttttaataaaaatttactt 19114768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 29395623 - 29395537
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  29395623 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 29395537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 31884510 - 31884575
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||| |||||| || ||||||||||    
T  31884510 tttttatcaaataataattacattactttttaataaaaacttactttttttgg-tgcttaaccaatg 31884575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 26881901 - 26881820
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||| ||||  ||||| |||| ||||||||| | |||||| | |  |||||||||||||||||||||| ||||||||||    
T  26881901 atcaatacaatccaacaaagtcttctaaaatctttaagattttttctatcaaaatagtcttttaaaatctcaatccaataca 26881820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 28386644 - 28386555
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||||||    
T  28386644 atcaatagaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccccct 28386555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 286
Target Start/End: Original strand, 30627588 - 30627731
Alignment:
Q  144 ttgttaaccagtgttccttga-acactgattaaggaatcta-aaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattaca 241  Q
    |||||||||||||  |||||| ||||||||||||||||||| ||| |||| |  ||||||  |||||||| | || |||||| || ||||||| ||||||    
T  30627588 ttgttaaccagtgc-ccttgagacactgattaaggaatctataaatagaatttatgtcttggaaatataacctgtcactttttataaagtaatgattaca 30627686  T
Q  242 ccactttttaa-taaaaacttacttcttttggttgtttaaccaatg 286  Q
      ||||||||| |||||| |||||||| |||| || ||||||||||    
T  30627687 ttactttttaattaaaaatttacttctcttgg-tgcttaaccaatg 30627731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 8001748 - 8001860
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| || |||| |||||||||   |||||||||||| ||||||| ||||||| ||||||  || |||| |||||| ||||    
T  8001748 ttaaggaatctagaaatagaaattttatcttgaaaatataagatgttacttttgataaagtaatgattacacaacttttacatgaaaatttacttgtttt 8001847  T
Q  271 ggttgtttaacca 283  Q
     | || |||||||    
T  8001848 agatgcttaacca 8001860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 9321705 - 9321617
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccc 103  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   ||||||||||||||||||| | || |||||||||||||    
T  9321705 atcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcccaattcaatacacccccc 9321617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 12750328 - 12750288
Alignment:
Q  247 ttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  12750328 ttttaataaaaacttacttcttttaattgtttaaccaatgt 12750288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 288
Target Start/End: Original strand, 18910398 - 18910522
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggtta---cttttgatcaagtaataattacaccactttttaataaaaactt 261  Q
    |||||||||| ||||||| ||| |||||| || | |||||||||||||| ||||   ||||| || || |||| ||||||  ||||||||||||||| ||    
T  18910398 cactgattaaagaatctataaatagaaattttattttaaaaatataaactgttagtactttttataaa-taatgattacattactttttaataaaaattt 18910496  T
Q  262 acttcttttggttgtttaaccaatgtc 288  Q
    | ||||||||| ||||||| |||||||    
T  18910497 atttcttttgg-tgtttaatcaatgtc 18910522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 27160391 - 27160435
Alignment:
Q  260 ttacttcttttggttgtttaaccaatgtctt-agggcactgttta 303  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  27160391 ttacttgttttggttgtttaaccaatgtcttgagggcactgttta 27160435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 31160814 - 31160758
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttta 251  Q
    ||||||||||||||||||   | ||||||||| |||||||||||||| |||||||||    
T  31160814 ttgtcttaaaaatataaattttgacttttgattaagtaataattacatcacttttta 31160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 36160654 - 36160565
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||| |||||||| |  |||| |||||  ||||||||||||||| |||||||| ||| ||||||||| ||||  ||| ||||||||||    
T  36160654 ttgtcttagaaatataagc--ttacatttgacaaagtaataattacactactttttattaagaacttacttgttttaattgcttaaccaatg 36160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 39238916 - 39238844
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| |||   ||||| |||||||||||||| ||||||| | |||||| ||||||||||||| ||||    
T  39238916 tcttaaaaatgtaagttgttacatttgatcaagtaatgattacactattttttattaaaaacttacttgtttt 39238844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 48282857 - 48282981
Alignment:
Q  137 aagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaata 235  Q
    |||||||||||||||| |||  ||  |  ||||| |||||||||||| ||| |||| |  |||||| ||||||||| | || |||||| |||| ||||||    
T  48282857 aagggtcttgttaaccggtgcccccggggcactggttaaggaatctataaatagaatttctgtcttgaaaatataatctgtcactttttatcaggtaata 48282956  T
Q  236 attacaccactttttaataaaaact 260  Q
    ||||||  |||||||| ||||||||    
T  48282957 attacattactttttagtaaaaact 48282981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 13643662 - 13643588
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||| ||||||||||| |||||||||||  || |||| |||||||||| |||||||||||  ||| |||||||    
T  13643662 ttgtcttgaaaatataaaccgttacttttgacaaattaattattacaccac-ttttaataaaattttatttctttt 13643588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 26829587 - 26829492
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||||| |||||||  ||||||||   |||||||||||| ||||||| ||||||| ||||||| || |||| |||||| |||| | || |||||||    
T  26829587 agaaattttgtcttggaaatataagatgttacttttgataaagtaatgattacacaactttttcatgaaaatttacttattttagatgcttaacca 26829492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 32187166 - 32187079
Alignment:
Q  171 attaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaa 257  Q
    |||||||||| || ||| |||||| ||||||| |||||||||   ||||||||||||||  |||||||| ||| |||||| |||||||    
T  32187166 attaaggaatttataaatagaaattttgtcttgaaaatataagatgttacttttgatcagataataattgcacaacttttcaataaaa 32187079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 33827819 - 33827913
Alignment:
Q  166 cactgattaaggaatctaaaaaagaaatctt--gtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaa 258  Q
    ||||| |||||||||||| |||  |||| ||  |||||  ||||||||||| | |||||| || ||||||||||||||  |||||||||||||||    
T  33827819 cactggttaaggaatctataaataaaattttctgtcttggaaatataaacgatcactttttattaagtaataattacattactttttaataaaaa 33827913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 33840146 - 33840052
Alignment:
Q  166 cactgattaaggaatctaaaaaagaaatctt--gtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaa 258  Q
    ||||| |||||||||||| |||  |||| ||  |||||  ||||||||||| | |||||| || ||||||||||||||  |||||||||||||||    
T  33840146 cactggttaaggaatctataaataaaattttctgtcttggaaatataaacgatcactttttattaagtaataattacattactttttaataaaaa 33840052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 20111759 - 20111681
Alignment:
Q  24 aatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||| |||||||||||||| | || ||| |||   |||||||||||||||||||   ||| |||||||||||    
T  20111759 aatctcacaaagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcgtaatcaaatacaccccc 20111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 49231993 - 49232083
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||| |||||||||||||   |||||||||||||| ||||    
T  49231993 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccctctta 49232083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 51702603 - 51702689
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||| ||||||||||    
T  51702603 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcctatacaccccc 51702689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 1923131 - 1923090
Alignment:
Q  66 aaaatagtcttttaaaatctcgatccaatacaccccccttat 107  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  1923131 aaaatagtcttttaaaatcctaatccaatacaccccccttat 1923090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 14389472 - 14389509
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  14389472 caaaacagtcttttaaaatctcaatccaatacaccccc 14389509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 34347556 - 34347612
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttgg 272  Q
    ||||||||||| ||||||| ||||||| ||||||| ||||| | |||||| ||||||    
T  34347556 ttacttttgataaagtaatgattacacaactttttcataaagatttacttgttttgg 34347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 38597545 - 38597477
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| ||||||| |||| || ||||||| || ||||||||||| |||||| |  ||||||||||    
T  38597545 acttttgattaagtaatgattagacaacttttttattaaaacttacttgttttggatacttaaccaatg 38597477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 50015773 - 50015877
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    |||||||||||||| |||| || ||| ||||||||||||||||     ||||||||||||||| ||  |||| || ||||||| ||||||| ||| || |    
T  50015773 tgattaaggaatctcaaaataggaattttgtcttaaaaatatatgatattacttttgatcaagcaacgattatacaactttttcataaaaatttatttgt 50015872  T
Q  268 tttgg 272  Q
    |||||    
T  50015873 tttgg 50015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 24573515 - 24573432
Alignment:
Q  19 aatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  24573515 aatataatttcacaaagtcttttaaaatcttcaggattttgtttgccaaaataatcttttaaaatcccaatccaatacaccccc 24573432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 44040986 - 44040896
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||| ||||||||||| |||||||||  |||||||||||||||||||    
T  44040986 atcaatataatctcgcaaaatcttttaaaatcttcagaatcttgtttgacaaaatagtctcttaaaatcttaatccaatacacccccctta 44040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 35347169 - 35347089
Alignment:
Q  22 ataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||| ||| |||||||||||    
T  35347169 ataatctcacaaagtcttttaaaatcttcaggatttagtttgccaaaatagtctgataaaatctcaatcaaatacaccccc 35347089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 285
Target Start/End: Complemental strand, 4020210 - 4020096
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| ||||||| ||||||||||  |||| ||||||| ||||||| ||||||| | ||||| |||||||||||||| ||||    
T  4020210 ttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaaacttacttgtttt 4020111  T
Q  271 ggttgtttaaccaat 285  Q
    ||||  |||||||||    
T  4020110 ggttacttaaccaat 4020096  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 15671112 - 15671221
Alignment:
Q  166 cactgattaaggaatctaaaaaagaaatctt-gtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||| |||||||||||| |||  |||| || |||||  |||||||||| || |||||| |||||||||||||||||  |||||||||||||||||||||    
T  15671112 cactggttaaggaatctataaataaaatttttgtcttcgaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaacttact 15671211  T
Q  265 tcttttggtt 274  Q
    || |||||||    
T  15671212 tcatttggtt 15671221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 34290252 - 34290167
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| |||| |||||| ||||||||||||| ||||||||| |||||||||||| |||||| ||||| | ||||||||||||||    
T  34290252 atcaatacaatcacacaaagtcttttaaaatctgcaggattttatttgccaaaataatcttttgaaatcccaatccaatacacccc 34290167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 43152049 - 43152114
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||    
T  43152049 aatcttttaaaatcttcaagactttgtttgctaaaatagtcttttaaaatctcaatccaatacacc 43152114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 36054095 - 36054007
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||| |||||||||||||||||    
T  36054095 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacacccccct 36054007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 29032524 - 29032425
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||| |||| ||| |||||| |||||||||||||||||   |||||||||||||||||||| ||||||| ||||||| |||||||||| ||| ||||    
T  29032524 ttaaggattctacaaacagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcataaaaacttgcttgtttt 29032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 286
Target Start/End: Original strand, 44291196 - 44291345
Alignment:
Q  136 taagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaat 234  Q
    |||||||||||||||||||||  ||  |  ||||| |||||||||||| ||| |||| |  ||||||  |||||||||| || |||||| || |||||||    
T  44291196 taagggtcttgttaaccagtgccccgggg-cactggttaaggaatctataaatagaatttctgtcttggaaatataaactgtcactttttattaagtaat 44291294  T
Q  235 aattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||  ||||||||||||| ||||||||||||||| || ||||||||||    
T  44291295 aattacattactttttaataaatacttacttcttttgg-tgcttaaccaatg 44291345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 2124790 - 2124702
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| ||||||||||| |||| |||||| |||  ||||| |||||||||||||||| |||||||||||||||||    
T  2124790 atcaatacaatccaacaaagtcttttaaaattttcaagattttttttatcaaaacagtcttttaaaatctcaatccaatacacccccct 2124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 27593965 - 27594033
Alignment:
Q  34 aatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    |||||||||||||||||| || |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  27593965 aatcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 27594033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 4490896 - 4490779
Alignment:
Q  167 actgattaaggaatc-taaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||   ||||||||||| || |||||||||||| |  ||||||| |||||||| ||    
T  4490896 actgattaaggaatcataaaatagaaattttgtct-aaaaatataaatttttacttttgataaaataataattacactatcttttaat-aaaacttattt 4490799  T
Q  266 cttttggttgtttaaccaat 285  Q
     ||||| |||||||||||||    
T  4490798 gttttgattgtttaaccaat 4490779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 30589846 - 30589933
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccc 103  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| ||||||||||||||||    
T  30589846 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccc 30589933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 45214169 - 45214086
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| |||||||||| | ||||| |||||||| ||||||||||||    
T  45214169 atcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaaatctcaatccaatacacc 45214086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 14978546 - 14978628
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    |||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||  ||||||||||||||  |||||||||||    
T  14978546 tcaatataatcttacaaagtcttttaaaatcttcagaatttgatttgctaaaatgttcttttaaaatctcattccaatacacc 14978628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 20585884 - 20585818
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||||| ||||| ||||||    
T  20585884 aaatataaactgttacttttgattaactaattattacaccactttttaataaaatcttacctctttt 20585818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 24149922 - 24149836
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||  ||||| || ||||||||||||| |||||| | |  |||||||||||||||||||||  |||||||||||||||    
T  24149922 atcaatataatccaacaaagtcatttaaaatcttcaagattttttctatcaaaatagtcttttaaaatcttaatccaatacaccccc 24149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 35322096 - 35322019
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||||| ||||||||||  | |||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  35322096 ttgtcttagaaatataaact-tcactttttattaagtaataattacattactttttaataaaaacttacttcttttggt 35322019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 35483682 - 35483592
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||||  |||||||||||||| |||| ||||| ||||| |||||||||| |||| | ||| ||| |||||||||||||    
T  35483682 tgtcttacaaatataaacttttacttttgatcaactaattattactccactctttaataaaatcttattacttctggctgtttaaccaatg 35483592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 42163641 - 42163722
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||| || |||||| || ||||||||||||||  ||||||||||||||||||||||| ||||| ||| |||||||||    
T  42163641 aaatataaaccgtcactttttattaagtaataattacattactttttaataaaaacttacttcatttgg-tgtgtaaccaatg 42163722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 26556868 - 26556956
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||| | |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  26556868 atcaatacaatcgaacaaagtcttttaaaatctttaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 26556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 36673345 - 36673253
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccccttata 108  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||||    
T  36673345 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccccttata 36673253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36786921 - 36787006
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaa---atctcgatccaatacaccccc 102  Q
    |||||||||||||||||   |||||||||||||||  ||||||||| ||||||||||||||||||    |||| |||||||||||||||    
T  36786921 tcaatataatctcacaa---cttttaaaatcttcaaaattttgttttccaaaatagtcttttaaatatttctcaatccaatacaccccc 36787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 45054475 - 45054384
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| ||| |||||||||| |||||||||||  || |||| ||||||| | |||||||||||| ||||||||||||   |||||||||||||    
T  45054475 ttgtgttagaaatataaactgttacttttgactaactaattattacactattttttaataaaatcttacttcttttaactgtttaaccaatg 45054384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 1711925 - 1712039
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||||||  | |||| ||||||| |||||||||   ||||| |||||  |||||||||||| || | |||||| |||||| |||||| ||||    
T  1711925 ttaaggaatctaaaattataaattttgtcttgaaaatataagatgttacatttgactaagtaataattatactattttttattaaaaatttacttatttt 1712024  T
Q  271 ggttgtttaaccaat 285  Q
     ||||||||||||||    
T  1712025 agttgtttaaccaat 1712039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 28709567 - 28709681
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||| ||||||| ||| |||||| || |||| ||||||||||  ||||||||||||||| |||| |||| || ||||||| ||| |||||||||| ||||    
T  28709567 ttaaagaatctataaatagaaattttatcttgaaaatataaaatgttacttttgatcaaataatgattatacaacttttttatagaaacttacttatttt 28709666  T
Q  271 ggttgtttaaccaat 285  Q
    |  || |||||||||    
T  28709667 gaatgcttaaccaat 28709681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 52617172 - 52617082
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||||| |||||||||||||| | || ||| |||   ||||| |||||||||||||   |||||||||||||||||||    
T  52617172 atcaatacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatccaatacacccccctta 52617082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 23360578 - 23360663
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||| |||||| ||||||||||||||    
T  23360578 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23360663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 23367418 - 23367503
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||| |||||| ||||||||||||||    
T  23367418 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 55446825 - 55446733
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||| |||||||  ||||||||   ||||||||| || ||||||| ||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  55446825 aaattttgtcttggaaatataagatgttacttttaataaagtaatgattacacaacttttta-taaaaacttacttcttttagatgtttaacca 55446733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 2379659 - 2379719
Alignment:
Q  225 atcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||| ||| |||| ||||    
T  2379659 atcaagtaagaattacactactttttaataaaaacttacttattttgattgcttaatcaat 2379719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 26292635 - 26292563
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||| |||||||||||||||| ||| || | |  ||||| |||||||||||||||| |||||||||||||||    
T  26292635 acaaagtcttttaaaatcttcaagatattttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 26292563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 28845650 - 28845717
Alignment:
Q  37 cttttaaaatcttcagga--ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||||| ||  |||| |||| |||||||||||||||||| ||| |||||||||||||||    
T  28845650 cttttaaaatcttcaagactttttttttgtcaaaatagtcttttaaaacctcaatccaatacaccccc 28845717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 29458152 - 29458060
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaa 257  Q
    ||||| |||||||||||||||  |||||  |||||||  |||||||||| |||| ||||||  || |||| ||||||||||||||||||||||    
T  29458152 cactggttaaggaatctaaaagtagaaaaattgtcttggaaatataaactgttatttttgactaactaattattacaccactttttaataaaa 29458060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 37043031 - 37043099
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    ||||| |||||||||||||| |||| || |||||||| |||||||||||||  ||| ||||||||||||    
T  37043031 gttacatttgatcaagtaatgattatactactttttattaaaaacttacttgatttagttgtttaacca 37043099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 43863020 - 43862952
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttgg 272  Q
    |||||||||| || ||| || || ||||||||||||||  ||||||||||||||||||||||| |||||    
T  43863020 aaatataaactgtcactctttattaagtaataattacattactttttaataaaaacttacttcatttgg 43862952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 48338881 - 48338813
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||| ||||||| ||||||| ||||||| ||||||| |||||||||||||| |||||| || |||||||    
T  48338881 gttatttttgataaagtaattattacacaacttttttataaaaacttacttgttttggatgcttaacca 48338813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 635706 - 635821
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| ||||||| || | ||||   |||||||||||| || |||| ||||||| |||||| ||||||||||||  | ||||    
T  635706 ttaaggaatctacaaatagaaattttgtcttgaataaataagatgttacttttgattaaataatgattacacaacttttcaataaaaacttatatgtttt 635805  T
Q  271 ggttgtttaaccaatg 286  Q
    || || ||||||||||    
T  635806 ggatgcttaaccaatg 635821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 6785819 - 6785910
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccac-tttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||| ||||||||||  |||||||||||||||||||| |||||||  | ||||| || ||||||| ||| |||| | ||||||||||||    
T  6785819 ttgtcttgaaaatataaaatgttacttttgatcaagtaatgattacacatcttttttcatgaaaacttgcttgtttttgatgtttaaccaat 6785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 10661196 - 10661287
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||| ||||||||    
T  10661196 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacatccccctta 10661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 31069612 - 31069687
Alignment:
Q  222 ttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg-tcttagggca 296  Q
    |||| |||||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||  |||| ||||||||||    
T  31069612 ttgaccaagtaataattacactactttttattaaaaacgtacttattttggttgcttaattaatgctcttagggca 31069687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 38628891 - 38628820
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||| ||||||||||| |||| |||||| | |  ||||| |||||||||||||||| ||||||||||||||    
T  38628891 acaaagtcttttaaaattttcaagattttttctatcaaaagagtcttttaaaatctcaatccaatacacccc 38628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 46223391 - 46223308
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| || |||||||||    
T  46223391 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaattcaatacacc 46223308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 8326232 - 8326159
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    |||||| |||| ||||||||||||   |||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  8326232 agaaattttgttttaaaaatataatatgttacttttgatcaagcaatgattacaccac-ttttcataaaaactta 8326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 11676734 - 11676852
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    ||||||||||||||| ||| | |||| ||||||| |||||| ||   ||||||||||||||| |||| || |||| | |||||  | ||||||| ||| |    
T  11676734 tgattaaggaatctacaaatataaattttgtcttgaaaataaaagacgttacttttgatcaaataatgataacacaattttttcttgaaaacttgcttgt 11676833  T
Q  268 tttggttgtttaaccaatg 286  Q
    ||||| |||||||||||||    
T  11676834 tttggatgtttaaccaatg 11676852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 22310571 - 22310652
Alignment:
Q  203 aaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||| |||||||| || |||| |||||||||||||||||| | ||||||||||| ||||  || |||| ||||||||||||||    
T  22310571 aaaacataaacggctatttttaatcaagtaataattacacta-tttttaataaatacttggtttttttagttgtttaaccaat 22310652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 27144078 - 27143997
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||| || |||||| || ||||||||||||||  | ||||||||||||||||| ||| ||| |||| ||||||||||    
T  27144078 aaatataaactgtgactttttattaagtaataattacattattttttaataaaaacttagttcattt-gttgcttaaccaatg 27143997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 31645449 - 31645363
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||| ||||||||||||||  |||||||||||||||    
T  31645449 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcttaatccaatacaccccc 31645363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 45254640 - 45254554
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||   ||| |||||||||||    
T  45254640 atcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatctaatacaccccc 45254554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 26004884 - 26004843
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  26004884 caaaacagtcttttaaaatctcaatccaatacacccccctta 26004843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 54801358 - 54801431
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||| |||||||||   |||||||||| | ||||||||||||||| | ||||| |||||||||||||| |||||    
T  54801358 tcttgaaaatataagatgttacttttgctaaagtaataattacacaattttttcataaaaacttacttattttg 54801431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 2127400 - 2127461
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    ||||||| ||||||||||||||| ||||||  ||||||| |||||| ||||||||| |||||||    
T  2127400 ttttgattaagtaataattacacgactttt--ataaaaaattacttattttggttgcttaacca 2127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 35731870 - 35731946
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||| |||||||||||||||| |||||| | |  ||||| | ||| |||||||||| |||||||||||| ||||||    
T  35731870 acaaagtcttttaaaatcttcaagattttttctatcaaaacaatctgttaaaatctcaatccaatacaccaccctta 35731946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 40843124 - 40843060
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||||||||||||||| |  |||||||| |||||| ||| || |||| ||||||||||||||    
T  40843124 tttgatcaagtaataattatattactttttattaaaaatttatttattttagttgtttaaccaat 40843060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 44698330 - 44698218
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||| |||||| ||| |||||| ||||||| |||||||||   |||||||||||| || |||| ||||||| | ||||| ||||||||||| || ||||    
T  44698330 ttaagaaatctacaaatagaaattttgtcttgaaaatataagatgttacttttgataaaataatgattacacaattttttcataaaaacttatttgtttt 44698231  T
Q  271 ggttgtttaacca 283  Q
     | | ||||||||    
T  44698230 agatatttaacca 44698218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 45408719 - 45408787
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtct 289  Q
    |||||| |||||||| |||||||| ||||||  ||||  |||||| |||| ||||||||||||||||||    
T  45408719 tttgattaagtaatatttacaccattttttataaaaatgttacttgtttttgttgtttaaccaatgtct 45408787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 50958955 - 50958871
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttgg 272  Q
    |||||| |||||||  ||||||||   |||| ||||||||||| ||| ||||||| | ||||| |||||||||||||| ||||||    
T  50958955 agaaattttgtcttggaaatataacatgttatttttgatcaagaaatgattacacaattttttcataaaaacttacttgttttgg 50958871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 14622206 - 14622107
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| ||||| |||||  |||| || ||||||||||  ||||||||||| ||| ||||  | ||||||||||| |||||||  |||||||||||    
T  14622206 ttaaggaatccaaaaatagaaaaattgtattgaaaatataaattgttacttttgaccaactaattttcacaccacttttcaataaaatattacttctttt 14622107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 20833907 - 20833990
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    ||||||| ||||| ||| |||||||||||||||| | || ||| |||   |||||||||||||||||||   ||||||||||||    
T  20833907 atcaatacaatcttacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacc 20833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 26835722 - 26835813
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||||  |||||||||||| || |||| |||| | |||||||||||||||  |||  |||||| | || ||||||||||    
T  26835722 ttgtcttgaaaatataaattgttacttttgattaactaattattatatcactttttaataaaattttaactcttttagctgcttaaccaatg 26835813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 31494050 - 31494117
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacc 282  Q
    |||| |||| ||||| |||| ||||||| | ||||| |||||||||||||| |||||| |||||||||    
T  31494050 gttaattttaatcaaataatgattacacaattttttcataaaaacttacttgttttggatgtttaacc 31494117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 32961233 - 32961178
Alignment:
Q  231 taataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| |||||||||||||||||||||| ||||| |||||| | || ||||||||||    
T  32961233 taattattacaccactttttaataaaatcttacctcttttagctgcttaaccaatg 32961178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 36436684 - 36436585
Alignment:
Q  183 aaaaaagaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacc 282  Q
    |||| ||||||  ||||||  ||||||||||  ||| |||||||||| |||| ||| ||| |||||||||||||| |||| || |||| | |||||||||    
T  36436684 aaaatagaaattatgtcttgtaaatataaacttttatttttgatcaaataattattgcactactttttaataaaatcttatttattttagatgtttaacc 36436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 50902507 - 50902415
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga----ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | ||    |||| |||   ||||||||||||||||||||  |||||||||||||||||    
T  50902507 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttttttattaaaatagtcttttaaaatcttaatccaatacacccccct 50902415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 11432556 - 11432642
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | ||||||||||| || | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  11432556 atcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 11432642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 26613090 - 26613180
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccac-tttttaataaaaacttacttcttttggttgtttaaccaa 284  Q
    |||||| | |||||||||  |||| |||| |||||||||||||||||  || ||||| || ||||||||||| |||||| || ||||||||    
T  26613090 ttgtctcagaaatataaaatgttatttttaatcaagtaataattacataactttttttatgaaaacttacttgttttggatgcttaaccaa 26613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 33417082 - 33417148
Alignment:
Q  32 aaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacac 98  Q
    ||||||||||||||| |||| || ||| |    |||||||||||||||||||||| |||||||||||    
T  33417082 aaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaatacac 33417148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 36036260 - 36036183
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtcttagggcact 298  Q
    ||||||| |||||||| ||||||||| |||| |||||| |||  || ||||| ||| |||||||||||| |||||||||    
T  36036260 ttttgattaagtaatagttacaccacctttttataaaacctttttttttttg-ttgcttaaccaatgtcatagggcact 36036183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 46251282 - 46251201
Alignment:
Q  18 caatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||| |||| |||||| |||||||||||||| | |||||| |||||||||| | || || |||||||| || ||||||||||    
T  46251282 caatacaatcacacaaagtcttttaaaatctttaagatttt-tttgccaaaacaatccttcaaaatctcaattcaatacaccc 46251201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 17109569 - 17109630
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||||| || || ||| || ||||||||||||||  ||||||||||||||| ||||||    
T  17109569 aaatataaactgtaacattttattaagtaataattacataactttttaataaaaatttactt 17109630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 17560771 - 17560702
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtct 289  Q
    |||||||||| |||||||||||  | ||||||||||||| ||| |||||||   ||||||| ||||||||    
T  17560771 ttttgatcaaataataattacattaatttttaataaaaatttatttctttttcctgtttaatcaatgtct 17560702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 34228283 - 34228390
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt-agg 293  Q
    ||||||||||||||||||   | ||||||||| || |||||||| || |||||||| ||||||| |||||  ||||  ||| |||||||||  ||| |||    
T  34228283 ttgtcttaaaaatataaattttgacttttgattaaataataatttcatcacttttt-ataaaaagttactcgttttaattgcttaaccaataccttaagg 34228381  T
Q  294 gcactgttt 302  Q
    |||||||||    
T  34228382 gcactgttt 34228390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 44707954 - 44708014
Alignment:
Q  24 aatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatc 84  Q
    ||||||||||| |||||||||||||| | |||||| |||   |||||| ||||||||||||    
T  44707954 aatctcacaaagtcttttaaaatcttaaagattttttttattaaaataatcttttaaaatc 44708014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 11740356 - 11740462
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||||||||||||||||| || |||||  ||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||  |||||    
T  11740356 cactgattaaggaatctaataatagaaaaattgtcttgaaaatataaactgttacttttgatcaactaattattacaccactttttaataaaattttact 11740455  T
Q  265 tcttttg 271  Q
    |||||||    
T  11740456 tcttttg 11740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 37928385 - 37928295
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||| ||||||||||  |||| ||||||| ||||||| ||||||| ||||||| |||||||||||||| |||||| |||||||||||||||    
T  37928385 tcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaaacttacttattttggatgtttaaccaatgtc 37928295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 45907059 - 45907134
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||  |||||||||| || |||||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  45907059 ttgtcttgtaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaacttacttctttt 45907134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 46197190 - 46197099
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccccttat 107  Q
    ||||||||||| ||| ||| ||||||||||||| ||  ||||| |||| ||||| | |||||||||||||| ||||||||||||||||||||    
T  46197190 atcaatataatttcataaagtcttttaaaatctccaatattttatttgtcaaaacaatcttttaaaatctcaatccaatacaccccccttat 46197099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 286
Target Start/End: Complemental strand, 16980037 - 16979939
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||| ||||||| |||||||||   ||||||||||||| ||||||||| |||| ||||||| ||||||| |||||| |||||| || ||||||||||    
T  16980037 agaaattttgtcttgaaaatataagatgttacttttgatcgagtaataatcacacaactttttcataaaaatttacttgttttggatgcttaaccaatg 16979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30111794 - 30111880
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||| |||||||||||||||    
T  30111794 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccccc 30111880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 11736212 - 11736281
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||||||| ||| |||| |||||||||||||||||||||| |||||||||||||| || |||||||||    
T  11736212 ttacttttgaccaactaattattacaccactttttaataaaatcttacttcttttggctgcttaaccaat 11736281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 152862 - 152950
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  152862 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 152950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 32631550 - 32631618
Alignment:
Q  38 ttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||| ||||||||||||| |||||    
T  32631550 ttttaaaatcttcatgactttttttgccaaaatagtctttcaaaatctcaatccaatacaccctcctta 32631618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 39300494 - 39300426
Alignment:
Q  34 aatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    |||||||||||||||||| || |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  39300494 aatcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatccaatacacccc 39300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 7833769 - 7833860
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||||| |||| |||||| ||| |||| ||| ||| |||||||||||||| ||||||| |||||| || ||||||||||    
T  7833769 ttgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatcttacttgttttggctgcttaaccaatg 7833860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 33194810 - 33194715
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||||||||||||||  | || |||||| ||||||| ||||||| |||||||| |||||| |||||| |||| |||| ||||||||| ||||    
T  33194810 ttgtcttaaaaatataaactatcacatttgattaagtaatgattacactactttttattaaaaatttacttattttagttgcttaaccaatatctt 33194715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 27417733 - 27417651
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacac 98  Q
    ||||||| ||||| ||||| |||||||||||||||| |||||| | |  ||||||| |||||||||||||| |||||||||||    
T  27417733 atcaatacaatctaacaaagtcttttaaaatcttcaagattttttctatcaaaatactcttttaaaatctcaatccaatacac 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 34114626 - 34114540
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| | |||||||| ||||||| |||||| | |||||||||||||||    
T  34114626 atcaatacaatcacacaaagtcttttaaaatctttaagattttttctgccaaaacagtctttcaaaatcccaatccaatacaccccc 34114540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 42677332 - 42677250
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacac 98  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | ||||  |||||||| |||||||||||    
T  42677332 atcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatccaatacac 42677250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 47912609 - 47912519
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||| ||||||||||    
T  47912609 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatatacccccctta 47912519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 23142697 - 23142769
Alignment:
Q  215 gttacttttgatcaagtaataattacaccacttttta-ataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| ||||||||||||||| ||||||| |||||||  |||||||||||||| |||||| |||||||||||||    
T  23142697 gttatttttgatcaagtaattattacacaacttttttcataaaaacttacttattttggatgtttaaccaatg 23142769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 28343319 - 28343407
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||||||||||||||||| | |||||||||||||||||    
T  28343319 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcccaatccaatacacccccct 28343407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 1309725 - 1309840
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| || ||||||||||||||   ||||||||| ||||| |||  ||||||| | ||||| ||||||| ||| || ||||    
T  1309725 ttaaggaatctacaaatagaaattttatcttaaaaatataatacgttactttttatcaaataactattacacaattttttcataaaaatttatttatttt 1309824  T
Q  271 ggttgtttaaccaatg 286  Q
    || |||||||||||||    
T  1309825 ggatgtttaaccaatg 1309840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 34993148 - 34993223
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||| |||||||||||||||||   |||||||||||| || |||||||||||| ||||||| || |||||||||||    
T  34993148 aaattttgtcttaaaaatataagatgttacttttgataaaataataattacacaactttttcatgaaaacttactt 34993223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 12252471 - 12252385
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | |||||||||||||| |||||||||||||||    
T  12252471 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacaatcttttaaaatctcaatccaatacaccccc 12252385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 16685794 - 16685724
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaa-taaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||| |||||| || ||||||||| ||||    
T  16685794 tttgatcaagtaatgattacacaactttttaaataaaaacttacttattttggatgcttaaccaatatctt 16685724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 17660030 - 17659960
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaa-taaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||| |||||| || ||||||||| ||||    
T  17660030 tttgatcaagtaatgattacacaactttttaaataaaaacttacttattttggatgcttaaccaatatctt 17659960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 23102300 - 23102390
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  23102300 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 23102390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 33475538 - 33475624
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| ||| |||||||||||    
T  33475538 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcaaatacaccccc 33475624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 22931919 - 22931976
Alignment:
Q  231 taataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||||||| |||||||| | |||| |||||| ||||||||||||||||||||||    
T  22931919 taataattacactactttttattgaaaatttacttattttggttgtttaaccaatgtc 22931976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 31495340 - 31495413
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttg-ccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||||||||||||||  | ||| |||| |||||||||| |||||||||||| |||||||||| ||||||||    
T  31495340 aatcttttaaaatcttcaaaactttctttggccaaaatagtattttaaaatctcaatccaatacatccccctta 31495413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 288
Target Start/End: Complemental strand, 8656445 - 8656289
Alignment:
Q  135 ttaagggtcttgttaaccagtgttccttga-acactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagta 232  Q
    |||||||||||| ||||||||||||    | ||| || |||||||| ||| ||| |||||  |||||||||||| ||||    | ||||||||| |||||    
T  8656445 ttaagggtcttgctaaccagtgttctcaaagacaatggttaaggaaactataaatagaaaatttgtcttaaaaaaataagttttaacttttgattaagta 8656346  T
Q  233 ataattacaccactttttaat-aaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    ||||||| |||||||||| || ||||| | |||| ||||||||| ||||||||||||    
T  8656345 ataattataccacttttttataaaaaagtcacttgttttggttgcttaaccaatgtc 8656289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 8896618 - 8896698
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||| |||||||||||||||||   |||||||||||||| ||||| ||||||| | ||||| || ||||||||||| ||||    
T  8896618 aaattttgtcttaaaaatataagatgttacttttgatcaggtaatgattacacaattttttcatgaaaacttacttgtttt 8896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 24937896 - 24937829
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||| || ||||||||||||||||||||||| ||||||| |||||| ||||||||  ||||||||||    
T  24937896 acttttaattaagtaataattacaccacttttt-ataaaaagttacttattttggttccttaaccaatg 24937829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 41061223 - 41061271
Alignment:
Q  36 tcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatc 84  Q
    ||||||||||||| || |||||||||||||||||||||||||| |||||    
T  41061223 tcttttaaaatctgcaagattttgtttgccaaaatagtcttttgaaatc 41061271  T

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Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 47032339 - 47032399
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaat 94  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||||| |||||||    
T  47032339 aatcttttaaaatcttcaagactttatttatcaaaatagtcttttaaaatctcaatccaat 47032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 510655 - 510745
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga--ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | ||  |||| |||   ||||||||||||||||||| | |||||||||||||||||    
T  510655 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcccaatccaatacacccccct 510745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 30823596 - 30823687
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccccttat 107  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   || |||||||||||||||||    
T  30823596 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaattcaatacaccccccttat 30823687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 39786453 - 39786568
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| ||||| |||||||| |||||||||    | ||||||||| || |||||||||||| |||||| |  ||||| ||| || ||||    
T  39786453 ttaaggaatctataaatagaaaacttgtcttgaaaatataagttttaacttttgattaaataataattacactacttttaataaaaaagttatttgtttt 39786552  T
Q  271 ggttgtttaaccaatg 286  Q
    ||||| ||||||||||    
T  39786553 ggttgcttaaccaatg 39786568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 288
Target Start/End: Original strand, 41760334 - 41760457
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||| |||| ||| ||||||| ||||||  |||||||||||| |||    ||| |||| |||||||||| ||||||| |||||||||||||| |||| |    
T  41760334 cactggttaaagaaactaaaaatagaaattatgtcttaaaaatgtaagtttttattttttatcaagtaattattacacaactttttaataaaatcttatt 41760433  T
Q  265 tcttttggttgtttaaccaatgtc 288  Q
      |||||| || ||||||||||||    
T  41760434 ctttttggatgcttaaccaatgtc 41760457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 1703908 - 1703974
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||| |||||||||||  || |||| ||||||| |||||||||||||| ||||| ||||||    
T  1703908 aaatataaactgttacttttgactaactaattattacacaactttttaataaaatcttacctctttt 1703974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 8117470 - 8117540
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttc 266  Q
    |||||| ||||||||||  |||| |||| || || |||||||||||  |||||||||||||||||||||||    
T  8117470 tgtcttgaaaatataaattgttattttttattaaataataattacattactttttaataaaaacttacttc 8117540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 23317843 - 23317893
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||||||||||||| || ||||||||||||||| || |||||||||||    
T  23317843 gttacttttgatcaagttatgattacaccacttttttatgaaaacttactt 23317893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 29893965 - 29894051
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||   ||||||||||||||    
T  29893965 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccc 29894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 43056773 - 43056687
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | |||||||||||||| || ||||||||||||    
T  43056773 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaattcaatacaccccc 43056687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 48136447 - 48136361
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| ||| |||||||||||| | |||||| |||   |||||||||||||||||||   |||||||| ||||||    
T  48136447 atcaatacaatctcacacaatattttaaaatcttgaagattttttttattaaaatagtcttttaaaatcctaatccaatataccccc 48136361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 3624274 - 3624339
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||| ||||| |||| |||||||||||||||||||||| |||||||| ||||  || |||||||||    
T  3624274 tttttatcaaataattattacaccactttttaataaaatcttacttcctttgaatgcttaaccaat 3624339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 11042523 - 11042568
Alignment:
Q  54 attttgtttgccaaaatagtcttttaaaatctcgatccaatacacc 99  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||    
T  11042523 attttgtttgccaaaataatcttttaaaatctcaatcaaatacacc 11042568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 12741382 - 12741467
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   ||||||||||||||||||||  |||||||||||||    
T  12741382 atcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatccaatacaccc 12741467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 18839303 - 18839388
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||||||| |||||||||||||||| | || ||| |||   |||||| ||||||||||||   ||||||||||||||    
T  18839303 atcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatccaatacacccc 18839388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 41434788 - 41434719
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    ||||||| |||||||||| || |||||| ||||| |||||||||||  | ||||||||||||| ||||||    
T  41434788 tgtcttagaaatataaactgtcactttttatcaaataataattacattattttttaataaaaatttactt 41434719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 8746229 - 8746149
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||| |||||||  ||||||| |  ||||||||||||||| |||| |||| || ||||||| |||||||||||||| ||||    
T  8746229 aaattttgtcttgtaaatatagaatgttacttttgatcaaataatgattatacaactttttcataaaaacttacttatttt 8746149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 11736096 - 11736208
Alignment:
Q  133 tattaagggtcttgttaaccagtgt-tccttgaa-cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaa 229  Q
    ||||||||||||||||||| ||||| |||  ||| || |||||||||||| |||||  |||||  || ||||| |||||||||| ||||||||||| |||    
T  11736096 tattaagggtcttgttaacgagtgtgtccccgaagcaatgattaaggaatttaaaagtagaaaaattatcttagaaatataaaccgttacttttgaccaa 11736195  T
Q  230 gtaataattacac 242  Q
     |||| |||||||    
T  11736196 ctaattattacac 11736208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 18037870 - 18037938
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaa 258  Q
    |||| |||| || ||||||||||  ||||||||||||||| ||||||||||| |  |||||||||||||    
T  18037870 aaattttgttttgaaaatataaattgttacttttgatcaaataataattacatcgttttttaataaaaa 18037938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 22035811 - 22035743
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttgg 272  Q
    |||||||||| || |||||| |  ||||||||||||||  | ||||||||||||||||||||| |||||    
T  22035811 aaatataaactgtcactttttaataagtaataattacattattttttaataaaaacttacttcatttgg 22035743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 25530563 - 25530647
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttgg 272  Q
    |||||| || ||||| |||||||||  ||||| |||||| ||||||| ||||||| | ||||| ||||||||||| || ||||||    
T  25530563 agaaattttatcttagaaatataaaatgttacatttgataaagtaatgattacacaattttttcataaaaacttatttgttttgg 25530647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 26203067 - 26203135
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||  || |||| ||||||||||||||||||||||  |||| |||||| |||| ||||||||||    
T  26203067 acttttgactaactaattattacaccactttttaataaaattttacctcttttagttgcttaaccaatg 26203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 36636044 - 36636123
Alignment:
Q  206 atataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||||| || ||| || ||||||||||||||  | ||||||||||||||||||||  ||||| || ||||||||||    
T  36636044 atataaacggtcaccttttattaagtaataattacattattttttaataaaaacttactttatttgg-tgcttaaccaatg 36636123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 40098256 - 40098300
Alignment:
Q  17 tcaatataatctcacaaaatcttttaaaatcttcaggattttgtt 61  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||    
T  40098256 tcaatataatcttacaaaatcttttaaaatcttcaaaattttgtt 40098300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 12810145 - 12810260
Alignment:
Q  169 tgattaaggaatctaaaaaagaaa-tcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    ||||||| ||||||| ||| |||| | |||||||||||||||||    ||||||||||  ||||||||||||||| ||||||| || ||| | | ||| |    
T  12810145 tgattaatgaatctataaatgaaaattttgtcttaaaaatataagatattacttttgacaaagtaataattacacaactttttcatgaaagcatgcttgt 12810244  T
Q  268 tttggttgtttaacca 283  Q
    ||| | ||||||||||    
T  12810245 tttagatgtttaacca 12810260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 29613990 - 29613899
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||| ||||||    
T  29613990 atcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacctccctta 29613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 31487755 - 31487830
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||| |||| || ||||||||||||||| | |||||  |||||||||| || |||||| |||||||||||| ||||    
T  31487755 gttattttttattaagtaataattacacaattttttcttaaaaacttatttattttggatgtttaaccaatatctt 31487830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 35089182 - 35089112
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctc 86  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||    
T  35089182 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctc 35089112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 36354718 - 36354653
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||||| ||  |||||||||    
T  36354718 aatcttttaaaatcttcatgacttt-tttatcaaaatagtcttttaaaatctcaatttaatacaccc 36354653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 47445402 - 47445472
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||||| | || |||| | ||||||||||    
T  47445402 ttacttttgatgaagtaataattaaactatttttttataaaaacttacatgttctggtcgcttaaccaatg 47445472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 19778036 - 19777931
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||| |||||||||| ||||  |||||  || |||| ||||||||||| |||| |||| || || |||| |||||| |||| |||||||||| |||||     
T  19778036 cactggttaaggaatccaaaagtagaaaaattatcttgaaaatataaactgttattttttattaactaattattacatcactctttaataaaatcttacc 19777937  T
Q  265 tctttt 270  Q
    ||||||    
T  19777936 tctttt 19777931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 39785105 - 39785197
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga--ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||||| || | |||||||||||||| | ||  |||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  39785105 atcaatacaatctcgcacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 39785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 47537488 - 47537404
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt-cttagggcactgtttaa 304  Q
    ||||||| ||||||||||||||| ||||||| ||||||| |||| | |||| |||| ||||| ||||| || ||||||| ||||||    
T  47537488 ttttgattaagtaataattacacaacttttt-ataaaaagttacctgttttagttgcttaactaatgtcctaagggcaccgtttaa 47537404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 48633740 - 48633691
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaat 83  Q
    ||||||||||||| ||||  | ||| ||||||||||||||||||||||||    
T  48633740 aatcttttaaaattttcaaaactttttttgccaaaatagtcttttaaaat 48633691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 7994165 - 7994253
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||| ||||||||||||   |||||||||| ||||||    
T  7994165 atcaatacaatctcacacagtcttttaaaatcttaaagactttctttattaaaatactcttttaaaatcctaatccaatacaaccccct 7994253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 30028032 - 30027964
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaacca 283  Q
    |||||||||||| ||||||| || |||| ||||||| || ||| ||||||| || ||| ||||||||||    
T  30028032 gttacttttgataaagtaatgatcacacaactttttcatgaaatcttacttgttatggatgtttaacca 30027964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 32884818 - 32884858
Alignment:
Q  66 aaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||||||||||||||||  ||||||||||| |||||||    
T  32884818 aaaatagtcttttaaaatcttaatccaatacactcccctta 32884858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 46300738 - 46300678
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgttt 278  Q
    |||||| |||| |||||||||||| |||||||||  |||| ||||||| |||| |||||||    
T  46300738 actttttatcatgtaataattacatcactttttataaaaaccttacttgttttagttgttt 46300678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 16654187 - 16654268
Alignment:
Q  21 tataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||| ||| |||||||||||    
T  16654187 tataatctcacaaaatcttttaaaatcttcaggattttgttttcaaaaatagtttattaaaatctcaatctaatacaccccc 16654268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 273
Target Start/End: Complemental strand, 31647840 - 31647731
Alignment:
Q  165 acactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttac 263  Q
    ||||||||||| ||||||| ||| |||| |  ||||||| ||||||||||  | |||||| |||||||||||||||||  |||||||||||||||||||     
T  31647840 acactgattaaagaatctataaatagaatttctgtcttagaaatataaactatcactttttatcaagtaataattacattactttttaataaaaacttat 31647741  T
Q  264 ttcttttggt 273  Q
    ||||||||||    
T  31647740 ttcttttggt 31647731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 53272848 - 53272936
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| |||| |||||| ||||||||||||| ||| ||||||||| |||||||| ||| |||||||| | |||||||||||||||||    
T  53272848 atcaatagaatcacacaaagtcttttaaaatctgcagaattttgttttccaaaataatctcttaaaatcccaatccaatacacccccct 53272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 42315883 - 42315973
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||||    
T  42315883 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccctta 42315973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 54510579 - 54510649
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    |||||||||||||||||  || ||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  54510579 aatcttttaaaatcttccagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccccct 54510649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 19147174 - 19147251
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||| ||||||||||| || |||||| ||||| |||||||||||  |||| |||||||||||||||||||||||||    
T  19147174 tgtcttgaaaatataaactgtcactttttatcaaataataattacattacttattaataaaaacttacttcttttggt 19147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 10600699 - 10600643
Alignment:
Q  42 aaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacac 98  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||    
T  10600699 aaaatcttcagaattttatttgccaaaacagtcttttaaaatctcgatccaatacac 10600643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 27284184 - 27284069
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| | | |||||| |||||||  ||||||||   ||||||||||||||| |||| ||| ||| ||||||| ||||||||||| || ||||    
T  27284184 ttaaggaatctacatatagaaattttgtcttggaaatataagatgttacttttgatcaaataatgattgcacaacttttttataaaaacttatttatttt 27284085  T
Q  271 ggttgtttaaccaatg 286  Q
    || |||||||||||||    
T  27284084 ggatgtttaaccaatg 27284069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 54249064 - 54248993
Alignment:
Q  200 ttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    |||||||||||||| |||| |||| ||||||| |||||||||  | ||||||||||||||||||||||||||    
T  54249064 ttaaaaatataaactgttattttttatcaagtgataattacaatattttttaataaaaacttacttcttttg 54248993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 47686840 - 47686910
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| |||||||||| || ||| |||  |||||||||||||||||||||| |||||||||||||||||    
T  47686840 aatctttcaaaatcttcaagactttttttatcaaaatagtcttttaaaatctcaatccaatacacccccct 47686910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 12095070 - 12094961
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| |||  || |||||||||    ||||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||||    
T  12095070 ttaaggaatctacaaatagaaattttgcattgaaaatataagatattacttttgataaagtaatgattacacaactttttcataaaaacttacttatttt 12094971  T
Q  271 ggttgtttaa 280  Q
    || |||||||    
T  12094970 ggatgtttaa 12094961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 16341127 - 16341222
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||  |||||||||  |||||||||||| ||||||| ||||||  | ||||| ||||||| ||| || |||||| |||||||||||||||||    
T  16341127 ttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatttattttggatgtttaaccaatgtctt 16341222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 20775160 - 20775065
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||| ||||||||    ||| |||||||||| |||| ||||||  ||||||| |||||||||||||| |||||| || ||||||||||||||    
T  20775160 ttgtcttagaaatataagatattatttttgatcaaataattattacataactttttcataaaaacttacttgttttggatgcttaaccaatgtctt 20775065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 44930624 - 44930695
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||| |||||||||||||| | |||||| |||  ||||| |||||||||||||||| ||||||||||||||    
T  44930624 acaaagtcttttaaaatctttaagattttttttatcaaaacagtcttttaaaatctcaatccaatacacccc 44930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7808999 - 7809085
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||  |||||||||||||||| |||||||||||||||    
T  7808999 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaccagtcttttaaaatctcaatccaatacaccccc 7809085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 16072430 - 16072336
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtct 289  Q
    |||||||  |||||||||| |||||||||||  || |||| |||||| || |||||||||||| ||||| |||||| | || |||||||||||||    
T  16072430 ttgtcttggaaatataaaccgttacttttgactaactaattattacatcattttttaataaaatcttacctcttttagctgcttaaccaatgtct 16072336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 27769073 - 27769163
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  27769073 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 27769163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 23988206 - 23988291
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||   ||||||||||||||    
T  23988206 atcaatacaatctcacatattcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatccaatacacccc 23988291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 51100074 - 51100143
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaat-aaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| ||||||||||||||| |||||||||| ||||| |||||| ||||| ||||||||| ||||    
T  51100074 acttttgattaagtaataattacactactttttaataaaaaagttacttgttttgattgtttaacaaatg 51100143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 52110261 - 52110345
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | || || |||||||| || |||||||||||    
T  52110261 atcaatacaatcgcacaaaatcttttaaaatctttaagatttt-tttgccaaaacaatcgttcaaaatctcaattcaatacacccc 52110345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 17234032 - 17234116
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtc 288  Q
    |||||||||| |||| |||||||||||| || ||| |||||  |||||||||||  ||||||| |||| ||||||||| ||||||    
T  17234032 aaatataaactgttatttttgatcaagtcattattgcaccatattttaataaaattttacttcgtttgattgtttaacgaatgtc 17234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 22280406 - 22280318
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtcttagggcactgtttaa 304  Q
    |||||||||| ||| |||| |||||||||| ||||||||||| |||||||||||||  |  |||||||||| ||  |||||||| ||||    
T  22280406 ttacttttgaccaactaattattacaccacattttaataaaatcttacttcttttgtctacttaaccaatgcctaggggcactgattaa 22280318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 31089783 - 31089878
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    |||||||||||||||  || |||||| ||||||   ||||||||| | ||||||||||| ||||||| ||||||| ||||||| |||||||||||||    
T  31089783 tgattaaggaatctaccaatagaaattttgtctaggaaatataaatg-ttacttttgataaagtaatgattacacaactttttcataaaaacttact 31089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 38234612 - 38234700
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||   |||||||||||||||||    
T  38234612 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatcctaatccaatacacccccct 38234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 2565439 - 2565506
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||| |||| |||||  |||||||||||||||||||| ||||||| ||||||  ||||||||||||||    
T  2565439 tcttgaaaacataaaatgttacttttgatcaagtaatgattacacaacttttctataaaaacttactt 2565506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 5117834 - 5117908
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgc--caaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    |||||||||||||||||| || ||| |||    |||||||||||||||||||||| ||||||||||| |||||||    
T  5117834 aatcttttaaaatcttcaagacttttttttattcaaaatagtcttttaaaatctcaatccaatacactcccctta 5117908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 19480605 - 19480550
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||||    
T  19480605 gttacttttgataaagtaatgattacacaactttttcataaaaacttacttgtttt 19480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 31241978 - 31242045
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttac 263  Q
    |||||| |||||||||||||| |||||| || || |||||||||||  ||||||||||||||| ||||    
T  31241978 tgtcttgaaaatataaacggtcactttttattaaataataattacattactttttaataaaaatttac 31242045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7820950 - 7821036
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| || ||| | |  ||||  |||||||||||||||| |||||||||||||||    
T  7820950 atcaatacaatccaacaaagtcttttaaaatcttcaagaatttttctatcaaatcagtcttttaaaatctcaatccaatacaccccc 7821036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 8583086 - 8583008
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaat 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||    
T  8583086 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaat 8583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32683220 - 32683134
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  32683220 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 32683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 48262084 - 48262174
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||| ||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  48262084 atcaatacaatttcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 48262174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 388653 - 388616
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  388653 caaaatagtcttttaaaatctcaatccaatacaccccc 388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 16831126 - 16831234
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt-agg 293  Q
    |||| |||||||||||||   | ||||||||| |||||||||||| || ||||||| ||||||| ||| || ||||||||| |||| ||||| ||| |||    
T  16831126 ttgttttaaaaatataaattttgacttttgattaagtaataattatactacttttt-ataaaaagttatttgttttggttgcttaatcaatgccttaagg 16831224  T
Q  294 gcactgttta 303  Q
     |||||||||    
T  16831225 acactgttta 16831234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 28846206 - 28846169
Alignment:
Q  65 caaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28846206 caaaatagtcttttaaaatctcaatccaatacaccccc 28846169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 32323078 - 32323163
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||    
T  32323078 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacaccc 32323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 34236246 - 34236177
Alignment:
Q  218 acttttgatcaagtaataattacaccacttttta-ataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| |||| |||||||||| | |||||| | ||||| |||||| ||||||||||||||||||||    
T  34236246 acttttgattaagtgataattacactattttttataaaaaaaattacttgttttggttgtttaaccaatg 34236177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 35808568 - 35808640
Alignment:
Q  232 aataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt-agggcactgtttaa 304  Q
    ||||||||||| ||||||| ||||||| |||||| ||||||||| |||||||||| ||| ||| ||||||||||    
T  35808568 aataattacacaacttttt-ataaaaagttacttattttggttgcttaaccaatgacttgaggacactgtttaa 35808640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 38320153 - 38320214
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||||| || |||| | || ||||||||||||||  ||||||||||||||||||||||    
T  38320153 aaatataaactgtcacttcttattaagtaataattacattactttttaataaaaacttactt 38320214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 52837314 - 52837383
Alignment:
Q  217 tacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||||||| ||||| ||||||| ||||||| ||||||| || ||| |||||| || ||||||||||    
T  52837314 tacttttgatcacgtaattattacacaactttttcataaaaattttcttgttttggatgcttaaccaatg 52837383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 3434912 - 3434832
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatac 96  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |   ||||||||||||||||||||| || ||||||    
T  3434912 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctattaaaatagtcttttaaaatctcaattcaatac 3434832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 37461791 - 37461882
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    |||| |||||||||||||   | | |||| || ||||||||||||||||||||||| ||||||| |||||| ||||  ||| |||||||||||    
T  37461791 ttgttttaaaaatataaattttgatttttaattaagtaataattacaccacttttt-ataaaaagttacttattttaattgcttaaccaatgt 37461882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 41377294 - 41377214
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    ||||||| ||||| |||||||||| |||||||||||  || |||| ||| || |||||||||||||||  |||| ||||||    
T  41377294 aaatcttatcttagaaatataaaccgttacttttgactaactaattattgcatcactttttaataaaattttacctctttt 41377214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 53142846 - 53142778
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| |||||||||||||| || ||||| ||||||| ||| || ||| ||||| ||||||||||    
T  53142846 acttttgattaagtaataattacatcatttttttataaaaagttatttgtttcggttgcttaaccaatg 53142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 2824861 - 2824916
Alignment:
Q  215 gttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||| ||| ||||    
T  2824861 gttacttttgatcaagtaatgattacacaacattttcataaaaacttgcttgtttt 2824916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 2908236 - 2908326
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| ||||||||||   | | ||||||  ||||||||||||||||||||| | ||||||| | |||| ||||||||| ||||||||||    
T  2908236 ttgtcttgaaaatataaattttgatttttgagtaagtaataattacaccactttct-ataaaaagtcacttattttggttgcttaaccaatg 2908326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 5442402 - 5442490
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||||||||   |||||||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  5442402 atcaatacaatctcacag--tcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 5442490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 285
Target Start/End: Complemental strand, 30694378 - 30694284
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||| ||||||| |||||||||   |||  |||||||||||||||||||| ||| || |||  | ||||||||||| |||||||||  ||||||||    
T  30694378 agaaattttgtcttgaaaatataa---gttgtttttgatcaagtaataattatacctctgttttgtgaaaacttacttgttttggttgcataaccaat 30694284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 36752703 - 36752762
Alignment:
Q  221 tttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaa 280  Q
    ||||| |||||||||||||||| | |||||| |||||| |||||| |||| |||||||||    
T  36752703 tttgaccaagtaataattacacaattttttattaaaaatttacttgttttagttgtttaa 36752762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 39810731 - 39810817
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||| |||||||||   ||||||||||||||||||||||||||| || ||| | || ||||| || || |||||| ||||||||||||    
T  39810731 tcttgaaaatataagatgttacttttgatcaagtaataattaca-caatttatcatgaaaacatatttgttttggatgtttaaccaat 39810817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 48202549 - 48202482
Alignment:
Q  219 cttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||| ||||||||||||||| || || | |||||||||||| | ||||| ||| ||||||||||    
T  48202549 cttttgatgaagtaataattacactaccttcttataaaaacttacctgttttgtttgcttaaccaatg 48202482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 50086657 - 50086748
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||  |||||||||| ||||||||| |  || |||| ||||||||| |||||||||||| ||| | |||||| | || ||||||||||    
T  50086657 ttgtcttggaaatataaactgttacttttaactaactaattattacaccattttttaataaaatcttgcctcttttagctgcttaaccaatg 50086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 32653879 - 32653965
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttt-taataaaaacttacttcttttggttgtttaacca 283  Q
    |||||||||||||||   | ||||||||  |||||||||||||| || |||| ||||||||| |||||| ||||  |||||||||||    
T  32653879 tcttaaaaatataaattttaacttttgaataagtaataattacatcatttttttaataaaaaattacttattttatttgtttaacca 32653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 37431810 - 37431876
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    |||||||| |||||   ||||||||| || ||||||||||| ||| |||||| ||||||||||||||    
T  37431810 tcttaaaattataagatgttacttttaattaagtaataattgcacaacttttcaataaaaacttact 37431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 42217510 - 42217448
Alignment:
Q  39 tttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||||||||| |||||| | |  ||||| |||||||||||||||| ||| ||||||||||    
T  42217510 tttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcaaatacacccc 42217448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 42810452 - 42810390
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaa 257  Q
    |||||||| |||||||||| |||| ||||||  || ||||||||||| ||||||| |||||||    
T  42810452 ttgtcttagaaatataaactgttatttttgacaaactaataattacatcacttttcaataaaa 42810390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 54342156 - 54342242
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||||||||||||||||    |||||||||||||||    
T  54342156 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaattctaatccaatacaccccc 54342242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 18744961 - 18744889
Alignment:
Q  220 ttttgatcaagtaataattacaccacttttta--ataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    ||||| ||||||||| ||||||| | |||||   |||||||||| ||| |||||| |||||||||||||||||    
T  18744961 ttttgttcaagtaatgattacacaatttttttttataaaaacttgcttgttttggatgtttaaccaatgtctt 18744889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 22019715 - 22019598
Alignment:
Q  172 ttaaggaatctaaaaaagaaa-tcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||| | ||||||| |||||||||   |||| |||  || ||||||| ||||||| |||||||  | ||||||||||| ||||    
T  22019715 ttaaggaatctataaatgaaaattttgtctttaaaatataagatgttattttctattaagtaatgattacacaactttttcttgaaaacttacttgtttt 22019616  T
Q  271 ggttgtttaaccaatgtc 288  Q
    |  |||||| ||||||||    
T  22019615 gaatgtttatccaatgtc 22019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 27655394 - 27655330
Alignment:
Q  195 ttgtcttaaaaatataaacggttactttt--gatcaagtaataattacaccactttttaataaaa 257  Q
    |||||||| |||||||||| |||||||||  ||  || |||| ||||||||||||||||||||||    
T  27655394 ttgtcttagaaatataaactgttacttttttgactaactaattattacaccactttttaataaaa 27655330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 32325089 - 32325056
Alignment:
Q  218 acttttgatcaagtaataattacaccacttttta 251  Q
    ||||||||| ||||||||||||||||||||||||    
T  32325089 acttttgattaagtaataattacaccacttttta 32325056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 40161029 - 40161134
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttact 264  Q
    ||||| |||||||||||||||  | |||  || |||| ||||||||||| |||| ||||||     |||| |||||||||||||||||||||| |||||     
T  40161029 cactggttaaggaatctaaaagtaaaaaaattatcttgaaaatataaaccgttatttttgactgcctaattattacaccactttttaataaaatcttacc 40161128  T
Q  265 tctttt 270  Q
    ||||||    
T  40161129 tctttt 40161134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 49649922 - 49649975
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaa 257  Q
    ||||||||||||||||||||||  || |||| ||||||  ||||||||||||||    
T  49649922 aaatataaacggttacttttgactaactaattattacataactttttaataaaa 49649975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 49834058 - 49833989
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatc 84  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||    
T  49834058 atcaatacaatctcacataatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 49833989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 51554437 - 51554361
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacacc-actttttaataaaaacttacttcttttg 271  Q
    ||||||||||||||||| ||| || |||| |||||||||| |||||||| | |||||||||||| | | |||||||||    
T  51554437 ttgtcttaaaaatataagcggctatttttaatcaagtaat-attacaccaattttttaataaaatcctgcttcttttg 51554361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 29649215 - 29649147
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatc 84  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  29649215 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 29649147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 31152166 - 31152233
Alignment:
Q  203 aaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttg 271  Q
    ||||||||||| ||| ||||||||||| |||| || |||| | |||||||||||| |||| ||||||||    
T  31152166 aaaatataaaccgttgcttttgatcaaataattataacacaattttttaataaaatctta-ttcttttg 31152233  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 44568693 - 44568764
Alignment:
Q  220 ttttgatcaa-gtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctta 291  Q
    |||||||||| |||||||||||| ||||| |||||||||||||| || |||| ||  ||||| ||||||||||    
T  44568693 ttttgatcaatgtaataattacatcacttattaataaaaactta-tttttttagtactttaatcaatgtctta 44568764  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 50019200 - 50019288
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | ||||||||||| || | || ||| |||   ||||||||||||||||||    |||||||||||||||||    
T  50019200 atcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaattctaatccaatacacccccct 50019288  T

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Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 14863486 - 14863333
Alignment:
Q  134 attaagggtcttgttaaccagtgttcctt--gaacactgattaaggaatctaaaaaagaaatct-tgtcttaaaaatataaacggttacttttgatcaag 230  Q
    |||||||||||||||||||||||  ||||  | |||||| |||| ||||||| |||   ||| | |||||| ||||||||||| || |||||| ||||||    
T  14863486 attaagggtcttgttaaccagtg--ccttcgggacactggttaaagaatctataaatataatttatgtcttgaaaatataaactgtcactttttatcaag 14863389  T
Q  231 taataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    |||||||||||  | |||||||||||||||||||| |||||| || |||||||||||    
T  14863388 taataattacattaatttttaataaaaacttactttttttgg-tgcttaaccaatgt 14863333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 21052662 - 21052744
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    |||||||||| || |||||| |||||||||||||||||  | ||||||||||||||||||||||||||| || |||||||||||    
T  21052662 aaatataaactgtcactttttatcaagtaataattacatgattttttaataaaaacttacttcttttgg-tgcttaaccaatgt 21052744  T

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Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 11632771 - 11632683
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  11632771 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 11632683  T

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Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 2611143 - 2611264
Alignment:
Q  166 cactgattaaggaatctaaaaa-agaaatct-tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttac 263  Q
    ||||| |||||||||||| ||| |||||| | ||||||  |||||||| | || |||||| || ||||||||||||||  ||||||||||||||||||||    
T  2611143 cactggttaaggaatctataaatagaaatttatgtcttggaaatataagctgtcactttttattaagtaataattacattactttttaataaaaacttac 2611242  T
Q  264 ttcttttggttgtttaaccaatg 286  Q
    ||| ||||| || ||||||||||    
T  2611243 ttcatttgg-tgcttaaccaatg 2611264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 7609590 - 7609655
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||    
T  7609590 tttttatcaagtaataattacattactttttaataaaaacttacttcttttgg-tgcttaaccaatg 7609655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 8435204 - 8435054
Alignment:
Q  137 aagggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaaag-aaatcttgtcttaaaaatataaacggttacttttgatcaagtaata 235  Q
    |||||||||||||||| |||  ||  |  ||||||||||| |||||||||  | |||  |||||||  |||||||||  || |||||||| ||| |||||    
T  8435204 aagggtcttgttaacccgtgcccccggtgcactgattaagaaatctaaaagtggaaaaattgtcttggaaatataaagtgtaacttttgaccaactaata 8435105  T
Q  236 attacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| |||| |||||||||||| ||||||| |||||| || ||||||||||    
T  8435104 attataccattttttaataaaatcttacttattttggatgcttaaccaatg 8435054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 6901423 - 6901355
Alignment:
Q  34 aatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||||||||  | ||| ||||||||||||||||||||||||||| ||||| |||| ||||    
T  6901423 aatcttttaaaatcttcaaaactttttttgccaaaatagtcttttaaaatctcaatccattacatcccc 6901355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 6102940 - 6102826
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||  ||||||| |||||||||    | ||||||||| ||||||||||||||  |||||| |||||||| |||||| ||||    
T  6102940 ttaaggaatctataaatagaaaatttgtcttcaaaatataagttttgacttttgattaagtaataattacaatactttt-aataaaaagttacttatttt 6102842  T
Q  271 ggttgtttaaccaatg 286  Q
    ||||| ||||||||||    
T  6102841 ggttgcttaaccaatg 6102826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 11320210 - 11320121
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtct 289  Q
    ||||| |||||||||| || |||||| |||||||||||||||||  ||||||||||||||| | |||| |||||| || |||||||||||||    
T  11320210 tcttagaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaattaactt-ttttgg-tgcttaaccaatgtct 11320121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 11816023 - 11815924
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||| ||||||||||| |||||| ||||||| |||||||||   |||||||||||| ||||||| |||||||   ||||| |||||||||||||| ||||    
T  11816023 ttaatgaatctaaaaatagaaattttgtcttgaaaatataagatgttacttttgataaagtaatgattacacatatttttcataaaaacttacttgtttt 11815924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 13949886 - 13949799
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccc 103  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||| |||||    
T  13949886 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacatccccc 13949799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 18677002 - 18676939
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaa 93  Q
    |||||||||||||||||||||| |||||| | |  |||||||||||||||||||||| ||||||    
T  18677002 acaaaatcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaa 18676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 40411418 - 40411505
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtt-tgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| || |  ||||| |||||||||||||||| |||||||||||||||    
T  40411418 atcaatacaatccaacaaagtcttttaaaatcttcaagatttttttctatcaaaacagtcttttaaaatctcaatccaatacaccccc 40411505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 1447588 - 1447670
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||| | |||||  |||| |||||||||||||||| |||||| | ||||||||||||| |||| |||| ||||||||||    
T  1447588 aaatataagctgttacagttgaccaagtaataattacactacttttcattaaaaacttacttatttttgttgcttaaccaatg 1447670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 10553524 - 10553439
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||| ||||||| ||||||||||||||    
T  10553524 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtctttttaaatctcaatccaatacacccc 10553439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 10553737 - 10553818
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaataca 97  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| ||||||||||    
T  10553737 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaataca 10553818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 13717104 - 13717189
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccc 101  Q
    ||||||| ||||||||| |||||||||||||||| | || ||| |||   |||||||||||||||||||   ||||||||||||||    
T  13717104 atcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacccc 13717189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 13999300 - 13999209
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  13999300 atcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 13999209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 30840623 - 30840713
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||  | ||||||||||| |||||| || |||| |||||    
T  30840623 ttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacttttt-ttgaaaacttacttgttttggatgcttaatcaatg 30840713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 2275354 - 2275269
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| |||| |||||| |||||||||||||| | |||| | ||| ||||| || |||||||||||| | |||||||||||||||    
T  2275354 atcaatacaatcacacaaagtcttttaaaatctttaagattcttttttccaaa-taatcttttaaaatcccaatccaatacaccccc 2275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 14044726 - 14044772
Alignment:
Q  216 ttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  14044726 ttacttttgatcaagtaattattacacaacttttttataaaaactta 14044772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 16802115 - 16802026
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||| ||||||||||   | ||||||||| ||||||||||||||  ||||||| ||||||| ||| || ||||||||| |||||||||    
T  16802115 ttgtcttgaaaatataaattttgacttttgattaagtaataattacattacttttt-ataaaaagttatttgttttggttgcttaaccaat 16802026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 285
Target Start/End: Complemental strand, 22294096 - 22293982
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| |||||||  ||||||||    ||  |||||||||| |||| ||| ||| ||||||| |||||||||||||| ||||    
T  22294096 ttaaggaatctacaaatagaaattttgtcttggaaatataagatattggttttgatcaaataattattgcacaactttttcataaaaacttacttgtttt 22293997  T
Q  271 ggttgtttaaccaat 285  Q
    |  ||||||||||||    
T  22293996 gaatgtttaaccaat 22293982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 28511195 - 28511265
Alignment:
Q  216 ttacttttgatcaagtaataattacaccacttttta-ataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||||||| || |||||||||||| |||||||  |||||||||||| | ||||||||| |||||||||    
T  28511195 ttacttttgatgaattaataattacactactttttttataaaaacttacatgttttggttgcttaaccaat 28511265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 30293824 - 30293894
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattaca 241  Q
    |||| ||||||| ||| |||||| |||||||||||||||||   |||||||||||||||||||| ||||||    
T  30293824 ttaaagaatctacaaatagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattaca 30293894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 40459356 - 40459306
Alignment:
Q  45 atcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaata 95  Q
    ||||||||||||||||||| | ||||||| |||||||||||| ||||||||    
T  40459356 atcttcaggattttgtttgtcgaaatagttttttaaaatctcaatccaata 40459306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 6828020 - 6827951
Alignment:
Q  34 aatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||||||||| |||||||  | |||| |||| ||||||| |||||||||||||| |||||||||||||||    
T  6828020 aatcttttaagatcttcaaaacttttttttgtcaaaataatcttttaaaatctcaatccaatacaccccc 6827951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 14152530 - 14152587
Alignment:
Q  228 aagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||||  |||||||||    
T  14152530 aagtaataattacaccactttttataaaaaagttacttgttttggttacttaaccaat 14152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 26629583 - 26629511
Alignment:
Q  30 acaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||||||||||||| |||| || ||| |    |||||||||||||||||||||| |||||||||| ||||    
T  26629583 acaaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaatacagcccc 26629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 36482163 - 36482048
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||| ||||||| ||| |||||| |||| || |||||||||   ||||||||||||||| ||||  |||||| ||||||| || |||||||| || ||||    
T  36482163 ttaatgaatctacaaatagaaattttgttttgaaaatataagatgttacttttgatcaaataatgtttacacaacttttttatgaaaactta-ttatttt 36482065  T
Q  271 ggttgtttaaccaatgt 287  Q
     | ||||||||||||||    
T  36482064 agatgtttaaccaatgt 36482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 40012903 - 40012812
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccctta 106  Q
    ||||||| |||||||||   |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||||||||    
T  40012903 atcaatacaatctcacactgtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacacccccctta 40012812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 7319321 - 7319255
Alignment:
Q  220 ttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||| |||||||||| ||||||| ||||||||||| || ||||||  |||||| || ||||||||||    
T  7319321 tttttatcaagtaattattacacaactttttaatagaatcttactctttttggatgcttaaccaatg 7319255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 35185342 - 35185277
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    |||||| ||||||||||| || |||||| ||  |||||||||||||  |||||||||||||||||||    
T  35185342 tgtcttgaaaatataaactgtcactttt-atttagtaataattacattactttttaataaaaactta 35185277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 16611626 - 16611529
Alignment:
Q  165 acactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactt 261  Q
    |||||||||||  |||||||||  |||| | || |||||||||||||||  |||  |||| ||||||||||||||| |  | ||||||||||||||||    
T  16611626 acactgattaataaatctaaaagtagaatttttatcttaaaaatataaaacgttgtttttcatcaagtaataattatattattttttaataaaaactt 16611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 1920764 - 1920864
Alignment:
Q  188 agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgt 287  Q
    |||||| |||||||| ||||||||   ||||||||||| ||| |||| || ||| || |||||  | ||||||| |||||||||| |  |||||||||||    
T  1920764 agaaattttgtcttagaaatataaggtgttacttttgaccaaataatgatgacatcatttttttgtgaaaactttcttcttttggatacttaaccaatgt 1920863  T
Q  288 c 288  Q
    |    
T  1920864 c 1920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 4239663 - 4239579
Alignment:
Q  19 aatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    |||| ||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||||    
T  4239663 aataaaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 4239579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 42491728 - 42491636
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacacca-ctttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||||  |||||||||  ||||||||||| ||| ||||||||||| ||  |||||  ||||||||| ||| |||||| || ||||||||||    
T  42491728 ttgtcttcgaaatataaagtgttacttttgagcaaataataattacatcattttttttgtaaaaactttcttgttttggatgcttaaccaatg 42491636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 286
Target Start/End: Original strand, 22391 - 22539
Alignment:
Q  138 agggtcttgttaaccagtgttccttgaacactgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataa 236  Q
    ||||||||||||| ||||  |||  | ||||||||||||||||||| ||| | || | |||| ||  |||||||||| || |||||| ||||| ||||||    
T  22391 agggtcttgttaatcagtactcccgggacactgattaaggaatctataaatataacttttgtgttggaaatataaaccgtcactttttatcaaataataa 22490  T
Q  237 ttacaccactttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    |||||  ||| ||||||||||||||||||||||||| || ||||||||||    
T  22491 ttacattactctttaataaaaacttacttcttttgg-tgcttaaccaatg 22539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 1023 - 935
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | ||||  |||||||| |||||||||||||||||    
T  1023 atcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatccaatacacccccct 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 20532 - 20444
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  20532 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccct 20444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 80878 - 80790
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||||    
T  80878 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatccaatacacccccct 80790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 33910 - 33824
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||| |||||||||||||||    
T  33910 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatccaatacaccccc 33824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 16856 - 16933
Alignment:
Q  196 tgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggt 273  Q
    |||||| ||||||||||| || |||||| ||||||||||||||| |  | ||||||||||||||||| ||||||||||    
T  16856 tgtcttgaaaatataaactgtcactttttatcaagtaataattatataattttttaataaaaacttatttcttttggt 16933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 51734 - 51639
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaatgtctt 290  Q
    |||||||  |||||||||  |||||||||||| ||||||| ||||||  | ||||| ||||||| ||| || |||||| |||||||||||||||||    
T  51734 ttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatttattttggatgtttaaccaatgtctt 51639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 18064 - 18133
Alignment:
Q  218 acttttgatcaagtaataattacaccac-tttttaataaaaacttacttcttttggttgtttaaccaatg 286  Q
    ||||||||| ||||||||||||||| || ||||| ||||||| |||||| ||||||||| ||||||||||    
T  18064 acttttgattaagtaataattacacaactttttttataaaaagttacttgttttggttgcttaaccaatg 18133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 57255 - 57167
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacacccccct 104  Q
    ||||||| ||||||||| | |||||||||||||| |||| ||| |||   ||||||||||||||||||    |||||||||||||||||    
T  57255 atcaatacaatctcacacagtcttttaaaatcttaaggactttttttattaaaatagtcttttaaaattctaatccaatacacccccct 57167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 60453 - 60543
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||||  |||||||||| |||| |||| ||||| |||| |||| || | |||||||||||| |||| ||||||||  ||||||||||||    
T  60453 ttgtctttgaaatataaactgttattttttatcaattaattattatactattttttaataaaatcttatttcttttgactgtttaaccaat 60543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 67785 - 67875
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttttggttgtttaaccaat 285  Q
    |||||||  |||||||||| |||| |||| ||||| |||| |||| || | |||||||||||| |||| ||||||||  ||||||||||||    
T  67785 ttgtctttgaaatataaactgttattttttatcaattaattattatactattttttaataaaatcttatttcttttgactgtttaaccaat 67875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 38880 - 38822
Alignment:
Q  204 aaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    |||||||||| || | |||| |||||||||||||||||  |||||||||||||||||||    
T  38880 aaatataaactgtcattttttatcaagtaataattacattactttttaataaaaactta 38822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1372 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 1330 - 1379
Alignment:
Q  218 acttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  1330 actttttatcaagtaataattacatttctttttaataaaaacttacttct 1379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 15364 - 15481
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttct 267  Q
    |||||||||||| || ||| |||| | ||||||| |||||||||   ||||||||||| |||||||  |||| ||   ||||| |||||||||||||| |    
T  15364 tgattaaggaatttataaatagaatttttgtcttgaaaatataagatgttacttttgaccaagtaacgattatacacatttttcataaaaacttacttat 15463  T
Q  268 tttggttgtttaaccaat 285  Q
    ||||  ||||||||||||    
T  15464 tttgaatgtttaaccaat 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 36486 - 36401
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcagga-ttttgtttgccaaaatagtcttttaaaatctcgatccaatacaccc 100  Q
    ||||||||||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||   |||||||||||||    
T  36486 atcaatataatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacaccc 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 1133 - 1197
Alignment:
Q  198 tcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaactta 262  Q
    |||| ||||||||||| || |||||| || ||||||||||||||  |||||||||||||| ||||    
T  1133 tcttgaaaatataaactgtcactttttattaagtaataattacattactttttaataaaagctta 1197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 29987 - 30103
Alignment:
Q  171 attaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttcttt 269  Q
    ||||||||||||| ||| |||||  || | || |||||||||   ||||||||| || || |||||||||||| |  |||| |||||||||||||| |||    
T  29987 attaaggaatctacaaatagaaactttattttgaaaatataagatgttacttttaattaaataataattacacaaacttttcataaaaacttacttgttt 30086  T
Q  270 tggttgtttaaccaatg 286  Q
    ||  |||||||||||||    
T  30087 tgagtgtttaaccaatg 30103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 120781 - 120669
Alignment:
Q  172 ttaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 270  Q
    |||||||||||| ||| |||||| ||||||| |||||||||   || ||||||| | ||||||  ||| ||| ||||||  | |||||||||||| ||||    
T  120781 ttaaggaatctacaaatagaaattttgtcttgaaaatataagatgtcacttttggtaaagtaacgattgcacaacttttccacaaaaacttacttatttt 120682  T
Q  271 ggttgtttaacca 283  Q
    || ||||||||||    
T  120681 ggatgtttaacca 120669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3659 - 3573
Alignment:
Q  16 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatctcgatccaatacaccccc 102  Q
    ||||||| ||||||||| | ||| |||||||||| | || ||| |||   |||||||||||||||||||   |||||||||||||||    
T  3659 atcaatacaatctcacacagtctcttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccc 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 28847 - 28929
Alignment:
Q  169 tgattaaggaatctaaaaa-agaaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccacttttt 250  Q
    ||||||||||||||| ||| |||||| |||||||| | ||||||   |||  ||||||| ||||||| |||||||||||||||    
T  28847 tgattaaggaatctacaaatagaaattttgtcttatagatataatatgttctttttgataaagtaatgattacaccacttttt 28929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 52100 - 52030
Alignment:
Q  195 ttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttactt 265  Q
    |||||||| |||||||||  || | |||| | ||| |||||||||||  ||||||||||||||||||||||    
T  52100 ttgtcttagaaatataaattgtcattttttaccaaataataattacattactttttaataaaaacttactt 52030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 3418 - 3350
Alignment:
Q  190 aaatcttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaa 258  Q
    |||| ||||||| ||||||||||  |||||||||||| ||||| | |||| || ||||||| |||||||    
T  3418 aaattttgtcttgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 3350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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